CuGenDBv2

Gene ID	Sed0011448
Organism	Sechium edule (Chayote v1)
Description	chromosome transmission fidelity protein 8 homolog
Genome location	LG01:65566155..65569709
RNA-Seq Expression	Sed0011448
Synteny	Sed0011448
Gene Ontology terms	GO:0007064 - mitotic sister chromatid cohesion (biological process) GO:0031390 - Ctf18 RFC-like complex (cellular component)
InterPro domains	IPR018607 - Chromosome transmission fidelity protein 8

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6579684.1 hypothetical protein SDJN03_24132, partial [Cucurbita argyrosperma subsp. sororia]

4.2e-57

86.15

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Query:  MQIKLKCNCGETGCLEWAVVELQGVVEAQPSFQDRIQNLQIGVLCRPSAQEVYTFTVGYHELTGNKVPLKNPLLVLKKKACEDEDLMGDINPARAELEVI
        MQIK+KCNCGET CLEWAVVELQG+VEAQPSF+DR+Q L+IGVLCRPSAQEVYTFTVGYHELTG+KVPLK PLLVLKKK C DED  GD   A AELEVI
Subjt:  MQIKLKCNCGETGCLEWAVVELQGVVEAQPSFQDRIQNLQIGVLCRPSAQEVYTFTVGYHELTGNKVPLKNPLLVLKKKACEDEDLMGDINPARAELEVI

Query:  GIIRQRILFKTRPKALISKPQPSVKERSRS
        GIIRQRILFKTRPKALISKPQPSVKERSR+
Subjt:  GIIRQRILFKTRPKALISKPQPSVKERSRS

XP_022159534.1 putative uncharacterized protein DDB_G0287975 [Momordica charantia]

1.6e-53

83.72

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Query:  MQIKLKCNCGETGCLEWAVVELQGVVEAQPSFQDRIQNLQIGVLCRPSAQEVYTFTVGYHELTGNKVPLKNPLLVLKKKACEDEDLMGDINPARAELEVI
        MQIK+KCNCGET CLEWAVVELQGVVE Q SFQDR+QNL+IGVLCRPSAQEV+TFTVGYHELTG+KVPLK PLLVLKKK   +ED   D N   AELEVI
Subjt:  MQIKLKCNCGETGCLEWAVVELQGVVEAQPSFQDRIQNLQIGVLCRPSAQEVYTFTVGYHELTGNKVPLKNPLLVLKKKACEDEDLMGDINPARAELEVI

Query:  GIIRQRILFKTRPKALISKPQPSVKERSR
        GIIRQRILFKTRPKALISKPQP VKERSR
Subjt:  GIIRQRILFKTRPKALISKPQPSVKERSR

XP_022929119.1 putative uncharacterized protein DDB_G0287975 [Cucurbita moschata]

1.6e-56

85.38

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Query:  MQIKLKCNCGETGCLEWAVVELQGVVEAQPSFQDRIQNLQIGVLCRPSAQEVYTFTVGYHELTGNKVPLKNPLLVLKKKACEDEDLMGDINPARAELEVI
        MQIK+KCNCGET CLEWAVVELQG+VEAQPSF+DR+Q L+IGVLCRPSAQEVYTFTVGYHEL G+KVPLK PLLVLKKK C DED  GD   A AELEVI
Subjt:  MQIKLKCNCGETGCLEWAVVELQGVVEAQPSFQDRIQNLQIGVLCRPSAQEVYTFTVGYHELTGNKVPLKNPLLVLKKKACEDEDLMGDINPARAELEVI

Query:  GIIRQRILFKTRPKALISKPQPSVKERSRS
        GIIRQRILFKTRPKALISKPQPSVKERSR+
Subjt:  GIIRQRILFKTRPKALISKPQPSVKERSRS

XP_022970179.1 putative uncharacterized protein DDB_G0287975 [Cucurbita maxima]

2.1e-56

85.38

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Query:  MQIKLKCNCGETGCLEWAVVELQGVVEAQPSFQDRIQNLQIGVLCRPSAQEVYTFTVGYHELTGNKVPLKNPLLVLKKKACEDEDLMGDINPARAELEVI
        MQIK+KCNCGET CLEWAVVELQG+VEAQPSF+DR Q L+IGVLCRPSAQEVYTFTVGYHELTG+KVPLK PLLVLKKK C DED  GD   A AELEVI
Subjt:  MQIKLKCNCGETGCLEWAVVELQGVVEAQPSFQDRIQNLQIGVLCRPSAQEVYTFTVGYHELTGNKVPLKNPLLVLKKKACEDEDLMGDINPARAELEVI

Query:  GIIRQRILFKTRPKALISKPQPSVKERSRS
        GIIRQR LFKTRPKALISKPQPSVKERSR+
Subjt:  GIIRQRILFKTRPKALISKPQPSVKERSRS

XP_023551664.1 putative uncharacterized protein DDB_G0287975 [Cucurbita pepo subsp. pepo]

4.2e-57

86.15

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Query:  MQIKLKCNCGETGCLEWAVVELQGVVEAQPSFQDRIQNLQIGVLCRPSAQEVYTFTVGYHELTGNKVPLKNPLLVLKKKACEDEDLMGDINPARAELEVI
        MQIK+KCNCGET CLEWAVVELQG+VEAQPSF+DR+Q L+IGVLCRPSAQEVYTFTVGYHELTG+KVPLK PLLVLKKK C DED  GD   A AELEVI
Subjt:  MQIKLKCNCGETGCLEWAVVELQGVVEAQPSFQDRIQNLQIGVLCRPSAQEVYTFTVGYHELTGNKVPLKNPLLVLKKKACEDEDLMGDINPARAELEVI

Query:  GIIRQRILFKTRPKALISKPQPSVKERSRS
        GIIRQRILFKTRPKALISKPQPSVKERSR+
Subjt:  GIIRQRILFKTRPKALISKPQPSVKERSRS

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CT18 Uncharacterized protein

2.0e-52

81.54

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Query:  MQIKLKCNCGETGCLEWAVVELQGVVEAQPSFQDRIQNLQIGVLCRPSAQEVYTFTVGYHELTGNKVPLKNPLLVLKKKACEDEDLMGDINPARAELEVI
        MQIKLKCNCGET CLEWAVVELQGVVE Q +FQDRIQNL+IG+LCRPSAQE+YTFTVGYHELTG+KV LK PLLVLKK    DED   DI    AELEVI
Subjt:  MQIKLKCNCGETGCLEWAVVELQGVVEAQPSFQDRIQNLQIGVLCRPSAQEVYTFTVGYHELTGNKVPLKNPLLVLKKKACEDEDLMGDINPARAELEVI

Query:  GIIRQRILFKTRPKALISKPQPSVKERSRS
        GIIRQRILFKTRPKALISKP+P VKERSR+
Subjt:  GIIRQRILFKTRPKALISKPQPSVKERSRS

A0A5D3BQB7 Uncharacterized protein

2.0e-52

81.54

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Query:  MQIKLKCNCGETGCLEWAVVELQGVVEAQPSFQDRIQNLQIGVLCRPSAQEVYTFTVGYHELTGNKVPLKNPLLVLKKKACEDEDLMGDINPARAELEVI
        MQIKLKCNCGET CLEWAVVELQGVVE Q +FQDRIQNL+IG+LCRPSAQE+YTFTVGYHELTG+KV LK PLLVLKK    DED   DI    AELEVI
Subjt:  MQIKLKCNCGETGCLEWAVVELQGVVEAQPSFQDRIQNLQIGVLCRPSAQEVYTFTVGYHELTGNKVPLKNPLLVLKKKACEDEDLMGDINPARAELEVI

Query:  GIIRQRILFKTRPKALISKPQPSVKERSRS
        GIIRQRILFKTRPKALISKP+P VKERSR+
Subjt:  GIIRQRILFKTRPKALISKPQPSVKERSRS

A0A6J1E2M4 Uncharacterized protein

7.9e-54

83.72

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Query:  MQIKLKCNCGETGCLEWAVVELQGVVEAQPSFQDRIQNLQIGVLCRPSAQEVYTFTVGYHELTGNKVPLKNPLLVLKKKACEDEDLMGDINPARAELEVI
        MQIK+KCNCGET CLEWAVVELQGVVE Q SFQDR+QNL+IGVLCRPSAQEV+TFTVGYHELTG+KVPLK PLLVLKKK   +ED   D N   AELEVI
Subjt:  MQIKLKCNCGETGCLEWAVVELQGVVEAQPSFQDRIQNLQIGVLCRPSAQEVYTFTVGYHELTGNKVPLKNPLLVLKKKACEDEDLMGDINPARAELEVI

Query:  GIIRQRILFKTRPKALISKPQPSVKERSR
        GIIRQRILFKTRPKALISKPQP VKERSR
Subjt:  GIIRQRILFKTRPKALISKPQPSVKERSR

A0A6J1EMV0 Uncharacterized protein

7.7e-57

85.38

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Query:  MQIKLKCNCGETGCLEWAVVELQGVVEAQPSFQDRIQNLQIGVLCRPSAQEVYTFTVGYHELTGNKVPLKNPLLVLKKKACEDEDLMGDINPARAELEVI
        MQIK+KCNCGET CLEWAVVELQG+VEAQPSF+DR+Q L+IGVLCRPSAQEVYTFTVGYHEL G+KVPLK PLLVLKKK C DED  GD   A AELEVI
Subjt:  MQIKLKCNCGETGCLEWAVVELQGVVEAQPSFQDRIQNLQIGVLCRPSAQEVYTFTVGYHELTGNKVPLKNPLLVLKKKACEDEDLMGDINPARAELEVI

Query:  GIIRQRILFKTRPKALISKPQPSVKERSRS
        GIIRQRILFKTRPKALISKPQPSVKERSR+
Subjt:  GIIRQRILFKTRPKALISKPQPSVKERSRS

A0A6J1I4S6 Uncharacterized protein

1.0e-56

85.38

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Query:  MQIKLKCNCGETGCLEWAVVELQGVVEAQPSFQDRIQNLQIGVLCRPSAQEVYTFTVGYHELTGNKVPLKNPLLVLKKKACEDEDLMGDINPARAELEVI
        MQIK+KCNCGET CLEWAVVELQG+VEAQPSF+DR Q L+IGVLCRPSAQEVYTFTVGYHELTG+KVPLK PLLVLKKK C DED  GD   A AELEVI
Subjt:  MQIKLKCNCGETGCLEWAVVELQGVVEAQPSFQDRIQNLQIGVLCRPSAQEVYTFTVGYHELTGNKVPLKNPLLVLKKKACEDEDLMGDINPARAELEVI

Query:  GIIRQRILFKTRPKALISKPQPSVKERSRS
        GIIRQR LFKTRPKALISKPQPSVKERSR+
Subjt:  GIIRQRILFKTRPKALISKPQPSVKERSRS

SwissProt top hits

e value

%identity

Alignment

P0CG13 Chromosome transmission fidelity protein 8 homolog

1.2e-06

32.08

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Query:  GCLEWAVVELQGVVEAQPSFQDRIQNLQIGVLCRPSAQEVYTFTVGYHELTGNKVPLKNPLLVLKKKACEDEDLMGDINPARAELEVIGIIRQRILFKTR
        G  EW ++ELQG +EA+  +   +    +G L   + + +    VG+H L G  + L+ P  VL K    D+D             V  +I+ +ILFKTR
Subjt:  GCLEWAVVELQGVVEAQPSFQDRIQNLQIGVLCRPSAQEVYTFTVGYHELTGNKVPLKNPLLVLKKKACEDEDLMGDINPARAELEVIGIIRQRILFKTR

Query:  PKALIS
        PK +I+
Subjt:  PKALIS

Q54JL4 Putative uncharacterized protein DDB_G0287975

2.0e-09

31.65

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Query:  MQIKLKCNCGETGCLEWAVVELQGVVEAQPSFQDRIQNLQIGVLC-RPSAQEVYTFTVGYHELTGNKVPLKNPLLVLKKK--------------ACEDED
        MQI +K     T   EW +++LQG +E    +   ++N  +G+L  +P+ ++ ++F +G   L G +VPLK PLLV+KK               A +++D
Subjt:  MQIKLKCNCGETGCLEWAVVELQGVVEAQPSFQDRIQNLQIGVLC-RPSAQEVYTFTVGYHELTGNKVPLKNPLLVLKKK--------------ACEDED

Query:  LMGDINPARAELEVIGIIRQRILFKTRPKALISKPQPSV
           +      E  + GI   +I F TRP   I  PQ SV
Subjt:  LMGDINPARAELEVIGIIRQRILFKTRPKALISKPQPSV

Q65ZA6 Chromosome transmission fidelity protein 8

7.3e-04

34.41

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Query:  VVEAQPSFQDRIQNLQIGVLC----RPSAQEVYTFTVGYHELTGNKVPLKNPLLVLKKKACEDEDLMGDINPARAELEVIGIIRQRILFKTRP
        +VE Q + + +  +L IG L     + S ++  T TVG   + G    LK PL VL+K   +  D+    +P+  EL+   IIR+RI F +RP
Subjt:  VVEAQPSFQDRIQNLQIGVLC----RPSAQEVYTFTVGYHELTGNKVPLKNPLLVLKKKACEDEDLMGDINPARAELEVIGIIRQRILFKTRP

Arabidopsis top hits

e value

%identity

Alignment

AT5G52220.1 CONTAINS InterPro DOMAIN/s: Chromosome transmission fidelity protein 8 (InterPro:IPR018607); Has 127 Blast hits to 127 proteins in 63 species: Archae - 0; Bacteria - 0; Metazoa - 70; Fungi - 17; Plants - 31; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).

6.2e-35

62.18

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Query:  MQIKLKCNCGETGCLEWAVVELQGVVEAQPSFQDRIQNLQIGVLCR-PSAQEVYTFTVGYHELTGNKVPLKNPLLVLKKKACEDEDLMGDINPARAELEV
        M+I++KC CGE  C EWA+VELQGVVE Q SFQ  IQNL+IG LC   S+Q  YTFTVGYHEL G+KV LK PLLVLKK   +      +++    ELEV
Subjt:  MQIKLKCNCGETGCLEWAVVELQGVVEAQPSFQDRIQNLQIGVLCR-PSAQEVYTFTVGYHELTGNKVPLKNPLLVLKKKACEDEDLMGDINPARAELEV

Query:  IGIIRQRILFKTRPKALIS
        +GIIR +ILFKTRPK LIS
Subjt:  IGIIRQRILFKTRPKALIS

AT5G52220.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Chromosome transmission fidelity protein 8 (InterPro:IPR018607).

6.2e-35

62.18

Show/hide

Query:  MQIKLKCNCGETGCLEWAVVELQGVVEAQPSFQDRIQNLQIGVLCR-PSAQEVYTFTVGYHELTGNKVPLKNPLLVLKKKACEDEDLMGDINPARAELEV
        M+I++KC CGE  C EWA+VELQGVVE Q SFQ  IQNL+IG LC   S+Q  YTFTVGYHEL G+KV LK PLLVLKK   +      +++    ELEV
Subjt:  MQIKLKCNCGETGCLEWAVVELQGVVEAQPSFQDRIQNLQIGVLCR-PSAQEVYTFTVGYHELTGNKVPLKNPLLVLKKKACEDEDLMGDINPARAELEV

Query:  IGIIRQRILFKTRPKALIS
        +GIIR +ILFKTRPK LIS
Subjt:  IGIIRQRILFKTRPKALIS

Sequences

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CDS sequence

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ATGCAGATCAAGTTGAAATGCAACTGCGGCGAAACCGGATGCCTGGAATGGGCCGTCGTTGAGTTGCAAGGCGTTGTCGAAGCTCAACCCTCGTTCCAGGACCGGATCCA
AAACCTCCAAATCGGTGTTCTATGTCGCCCATCGGCTCAGGAAGTATATACTTTTACAGTAGGCTACCACGAGCTGACAGGAAACAAAGTGCCTTTGAAGAATCCACTGT
TGGTGTTGAAGAAAAAGGCGTGCGAGGATGAGGATCTGATGGGTGATATCAATCCGGCTAGAGCAGAGTTGGAGGTCATTGGAATCATCAGGCAACGGATTCTGTTTAAG
ACCAGACCGAAGGCCCTCATTTCCAAACCACAACCATCGGTGAAGGAAAGATCTCGCTCTTGA

mRNA sequence

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CTCTTCCCGCCATTTTCACAACTTTCTGCGCATTTTCTCTCCAAAGCAGAAGAATCCGAAATCGAAAGCTACAGAGATGCAGATCAAGTTGAAATGCAACTGCGGCGAAA
CCGGATGCCTGGAATGGGCCGTCGTTGAGTTGCAAGGCGTTGTCGAAGCTCAACCCTCGTTCCAGGACCGGATCCAAAACCTCCAAATCGGTGTTCTATGTCGCCCATCG
GCTCAGGAAGTATATACTTTTACAGTAGGCTACCACGAGCTGACAGGAAACAAAGTGCCTTTGAAGAATCCACTGTTGGTGTTGAAGAAAAAGGCGTGCGAGGATGAGGA
TCTGATGGGTGATATCAATCCGGCTAGAGCAGAGTTGGAGGTCATTGGAATCATCAGGCAACGGATTCTGTTTAAGACCAGACCGAAGGCCCTCATTTCCAAACCACAAC
CATCGGTGAAGGAAAGATCTCGCTCTTGAGGATCTGTAGTGACAGGCCAAACAACATGATCTCTGTGTTTAAAGATGTGAAATTCATCCCTATCTTTTCTGGCCAGGCTT
CAAAGGTCCAAATTTGTATATTTAAATCCTATTTTGATCCCATCTTTATGCTGGTCGATTCCGGTCCTTATGTTTCGAACATTTTATTTTAGGCATATAATTCCATTTCA
TTCTGGGCATATAAGCTCAATCAAGGTGTCAAACCCTCTACTTCTTTTATTGTTAAACCAAAAAAGATTTGTGCAATTTTTTTTTTTTGTTAAGATAGAAATGAAACACG

Protein sequence

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MQIKLKCNCGETGCLEWAVVELQGVVEAQPSFQDRIQNLQIGVLCRPSAQEVYTFTVGYHELTGNKVPLKNPLLVLKKKACEDEDLMGDINPARAELEVIGIIRQRILFK
TRPKALISKPQPSVKERSRS

Sed0011448 (gene) of Chayote v1 genome