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Sed0011465 (gene) of Chayote v1 genome

Gene IDSed0011465
OrganismSechium edule (Chayote v1)
DescriptionPlant transposase
Genome locationLG04:28247333..28247870
RNA-Seq ExpressionSed0011465
SyntenySed0011465
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032201.1 Plant transposase [Cucumis melo var. makuwa]1.3e-4178.45Show/hide
Query:  MGGLWRASKSRLVSKIRSASHD-ELDTLKPDNITSMHDWNDLIKDKTSAQFKAKSKKFQEIKKKQLPHTCSRKGYARLTEDMKSSSSTNITRVMVWTRAH
        MGGLWRASKSRLVSKI  AS+D EL+ LKPDNI+SMHDWND IK KTSA FKAKSKKF+++K+KQLPHTCSR+GYARL ED+K SSST ITRV VWT+AH
Subjt:  MGGLWRASKSRLVSKIRSASHD-ELDTLKPDNITSMHDWNDLIKDKTSAQFKAKSKKFQEIKKKQLPHTCSRKGYARLTEDMKSSSSTNITRVMVWTRAH

Query:  TKKDGQPVNSQVADTM
         KKDG P+NSQVADT+
Subjt:  TKKDGQPVNSQVADTM

KAA0042856.1 Plant transposase [Cucumis melo var. makuwa]8.3e-4177.59Show/hide
Query:  MGGLWRASKSRLVSKIRSASHD-ELDTLKPDNITSMHDWNDLIKDKTSAQFKAKSKKFQEIKKKQLPHTCSRKGYARLTEDMKSSSSTNITRVMVWTRAH
        MGGLWRASKSRLVSKI  AS+D EL+ LKPDNI+SMHDWND IK KTSA FKAKSK F+++K+KQLPHTCSR+GYARL ED+K SSST ITRV VWT+AH
Subjt:  MGGLWRASKSRLVSKIRSASHD-ELDTLKPDNITSMHDWNDLIKDKTSAQFKAKSKKFQEIKKKQLPHTCSRKGYARLTEDMKSSSSTNITRVMVWTRAH

Query:  TKKDGQPVNSQVADTM
         KKDG P+NSQVADT+
Subjt:  TKKDGQPVNSQVADTM

KAA0051001.1 Plant transposase [Cucumis melo var. makuwa]6.4e-4177.59Show/hide
Query:  MGGLWRASKSRLVSKIRSASHD-ELDTLKPDNITSMHDWNDLIKDKTSAQFKAKSKKFQEIKKKQLPHTCSRKGYARLTEDMKSSSSTNITRVMVWTRAH
        MGGLWRASKSRLVSKI  AS+D EL  LKPDNI+SMHDWND IK KTSA FKAKSKKF+++K+KQLPHTCS +GYARL ED+K SSST ITRV VWT+AH
Subjt:  MGGLWRASKSRLVSKIRSASHD-ELDTLKPDNITSMHDWNDLIKDKTSAQFKAKSKKFQEIKKKQLPHTCSRKGYARLTEDMKSSSSTNITRVMVWTRAH

Query:  TKKDGQPVNSQVADTM
         KKDG P+NSQVADT+
Subjt:  TKKDGQPVNSQVADTM

KAA0057491.1 Plant transposase [Cucumis melo var. makuwa]1.7e-4177.59Show/hide
Query:  MGGLWRASKSRLVSKIRSASHD-ELDTLKPDNITSMHDWNDLIKDKTSAQFKAKSKKFQEIKKKQLPHTCSRKGYARLTEDMKSSSSTNITRVMVWTRAH
        MGGLWRASKSRLVSKI  AS+D E + LKPDNI+SMHDWND IK KTSA FKAKSKKF+++K+KQLPHTCSR+GYARL ED+K SSST+ITRV VWT+AH
Subjt:  MGGLWRASKSRLVSKIRSASHD-ELDTLKPDNITSMHDWNDLIKDKTSAQFKAKSKKFQEIKKKQLPHTCSRKGYARLTEDMKSSSSTNITRVMVWTRAH

Query:  TKKDGQPVNSQVADTM
         KKDG P+NSQVADT+
Subjt:  TKKDGQPVNSQVADTM

TYK14770.1 uncharacterized protein E5676_scaffold1610G00080 [Cucumis melo var. makuwa]2.2e-4177.59Show/hide
Query:  MGGLWRASKSRLVSKIRSASHD-ELDTLKPDNITSMHDWNDLIKDKTSAQFKAKSKKFQEIKKKQLPHTCSRKGYARLTEDMKSSSSTNITRVMVWTRAH
        MGGLWRASKSRLVSKI  AS+D EL+ +KPDNI+SMHDWND IK KTSA FKAKSKKF+++K+KQLPHTCSRKGYARL ED+K+SSST ITRV VWT+ H
Subjt:  MGGLWRASKSRLVSKIRSASHD-ELDTLKPDNITSMHDWNDLIKDKTSAQFKAKSKKFQEIKKKQLPHTCSRKGYARLTEDMKSSSSTNITRVMVWTRAH

Query:  TKKDGQPVNSQVADTM
         KKDG P+NSQVADT+
Subjt:  TKKDGQPVNSQVADTM

TrEMBL top hitse value%identityAlignment
A0A5A7SRN7 Plant transposase6.2e-4278.45Show/hide
Query:  MGGLWRASKSRLVSKIRSASHD-ELDTLKPDNITSMHDWNDLIKDKTSAQFKAKSKKFQEIKKKQLPHTCSRKGYARLTEDMKSSSSTNITRVMVWTRAH
        MGGLWRASKSRLVSKI  AS+D EL+ LKPDNI+SMHDWND IK KTSA FKAKSKKF+++K+KQLPHTCSR+GYARL ED+K SSST ITRV VWT+AH
Subjt:  MGGLWRASKSRLVSKIRSASHD-ELDTLKPDNITSMHDWNDLIKDKTSAQFKAKSKKFQEIKKKQLPHTCSRKGYARLTEDMKSSSSTNITRVMVWTRAH

Query:  TKKDGQPVNSQVADTM
         KKDG P+NSQVADT+
Subjt:  TKKDGQPVNSQVADTM

A0A5A7TLJ2 Plant transposase4.0e-4177.59Show/hide
Query:  MGGLWRASKSRLVSKIRSASHD-ELDTLKPDNITSMHDWNDLIKDKTSAQFKAKSKKFQEIKKKQLPHTCSRKGYARLTEDMKSSSSTNITRVMVWTRAH
        MGGLWRASKSRLVSKI  AS+D EL+ LKPDNI+SMHDWND IK KTSA FKAKSK F+++K+KQLPHTCSR+GYARL ED+K SSST ITRV VWT+AH
Subjt:  MGGLWRASKSRLVSKIRSASHD-ELDTLKPDNITSMHDWNDLIKDKTSAQFKAKSKKFQEIKKKQLPHTCSRKGYARLTEDMKSSSSTNITRVMVWTRAH

Query:  TKKDGQPVNSQVADTM
         KKDG P+NSQVADT+
Subjt:  TKKDGQPVNSQVADTM

A0A5A7UBP2 Plant transposase3.1e-4177.59Show/hide
Query:  MGGLWRASKSRLVSKIRSASHD-ELDTLKPDNITSMHDWNDLIKDKTSAQFKAKSKKFQEIKKKQLPHTCSRKGYARLTEDMKSSSSTNITRVMVWTRAH
        MGGLWRASKSRLVSKI  AS+D EL  LKPDNI+SMHDWND IK KTSA FKAKSKKF+++K+KQLPHTCS +GYARL ED+K SSST ITRV VWT+AH
Subjt:  MGGLWRASKSRLVSKIRSASHD-ELDTLKPDNITSMHDWNDLIKDKTSAQFKAKSKKFQEIKKKQLPHTCSRKGYARLTEDMKSSSSTNITRVMVWTRAH

Query:  TKKDGQPVNSQVADTM
         KKDG P+NSQVADT+
Subjt:  TKKDGQPVNSQVADTM

A0A5A7UVF2 Plant transposase8.1e-4277.59Show/hide
Query:  MGGLWRASKSRLVSKIRSASHD-ELDTLKPDNITSMHDWNDLIKDKTSAQFKAKSKKFQEIKKKQLPHTCSRKGYARLTEDMKSSSSTNITRVMVWTRAH
        MGGLWRASKSRLVSKI  AS+D E + LKPDNI+SMHDWND IK KTSA FKAKSKKF+++K+KQLPHTCSR+GYARL ED+K SSST+ITRV VWT+AH
Subjt:  MGGLWRASKSRLVSKIRSASHD-ELDTLKPDNITSMHDWNDLIKDKTSAQFKAKSKKFQEIKKKQLPHTCSRKGYARLTEDMKSSSSTNITRVMVWTRAH

Query:  TKKDGQPVNSQVADTM
         KKDG P+NSQVADT+
Subjt:  TKKDGQPVNSQVADTM

A0A5D3CTK4 Transposase_23 domain-containing protein1.1e-4177.59Show/hide
Query:  MGGLWRASKSRLVSKIRSASHD-ELDTLKPDNITSMHDWNDLIKDKTSAQFKAKSKKFQEIKKKQLPHTCSRKGYARLTEDMKSSSSTNITRVMVWTRAH
        MGGLWRASKSRLVSKI  AS+D EL+ +KPDNI+SMHDWND IK KTSA FKAKSKKF+++K+KQLPHTCSRKGYARL ED+K+SSST ITRV VWT+ H
Subjt:  MGGLWRASKSRLVSKIRSASHD-ELDTLKPDNITSMHDWNDLIKDKTSAQFKAKSKKFQEIKKKQLPHTCSRKGYARLTEDMKSSSSTNITRVMVWTRAH

Query:  TKKDGQPVNSQVADTM
         KKDG P+NSQVADT+
Subjt:  TKKDGQPVNSQVADTM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGGGTTGTGGAGAGCAAGTAAATCACGCTTGGTGAGTAAGATTCGAAGTGCTTCCCACGATGAGCTGGATACATTAAAGCCCGATAATATTACTTCAATGCATGA
TTGGAACGACTTAATCAAAGATAAAACAAGTGCACAGTTTAAGGCAAAAAGCAAAAAATTTCAAGAGATCAAGAAAAAACAACTTCCTCACACATGTAGTCGTAAAGGCT
ATGCTCGACTGACTGAAGACATGAAAAGTAGTTCATCAACTAATATTACACGAGTAATGGTTTGGACAAGGGCACATACGAAGAAAGATGGACAACCTGTTAACTCACAA
GTTGCAGACACAATGGTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTGGGTTGTGGAGAGCAAGTAAATCACGCTTGGTGAGTAAGATTCGAAGTGCTTCCCACGATGAGCTGGATACATTAAAGCCCGATAATATTACTTCAATGCATGA
TTGGAACGACTTAATCAAAGATAAAACAAGTGCACAGTTTAAGGCAAAAAGCAAAAAATTTCAAGAGATCAAGAAAAAACAACTTCCTCACACATGTAGTCGTAAAGGCT
ATGCTCGACTGACTGAAGACATGAAAAGTAGTTCATCAACTAATATTACACGAGTAATGGTTTGGACAAGGGCACATACGAAGAAAGATGGACAACCTGTTAACTCACAA
GTTGCAGACACAATGGTATGA
Protein sequenceShow/hide protein sequence
MGGLWRASKSRLVSKIRSASHDELDTLKPDNITSMHDWNDLIKDKTSAQFKAKSKKFQEIKKKQLPHTCSRKGYARLTEDMKSSSSTNITRVMVWTRAHTKKDGQPVNSQ
VADTMV