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Sed0011478 (gene) of Chayote v1 genome

Gene IDSed0011478
OrganismSechium edule (Chayote v1)
DescriptionZinc finger (C2H2 type) family protein
Genome locationLG08:25007863..25008893
RNA-Seq ExpressionSed0011478
SyntenySed0011478
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK19814.1 Zinc finger (C2H2 type) family protein [Cucumis melo var. makuwa]9.2e-4790.48Show/hide
Query:  MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGIADRTGQDKGGHAKFECPYCKITAPDVKTMQIHHESKHPKIPFEEDKVTNLHSVRVVAEASKPKPGVR
        MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAG+ADR+G +KGGHAKFECP+CKITAPDVK+MQIHHESKHPKIPFEEDKVTNLH+VRV AEASK KPGVR
Subjt:  MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGIADRTGQDKGGHAKFECPYCKITAPDVKTMQIHHESKHPKIPFEEDKVTNLHSVRVVAEASKPKPGVR

Query:  GSLKK
        GS KK
Subjt:  GSLKK
XP_008443699.1 PREDICTED: uncharacterized protein LOC103487230 [Cucumis melo]1.1e-4791.43Show/hide
Query:  MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGIADRTGQDKGGHAKFECPYCKITAPDVKTMQIHHESKHPKIPFEEDKVTNLHSVRVVAEASKPKPGVR
        MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAG+ADR+G +KGGHAKFECP+CKITAPDVK+MQIHHESKHPKIPFEEDKVTNLH+VRV AEASKPKPGVR
Subjt:  MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGIADRTGQDKGGHAKFECPYCKITAPDVKTMQIHHESKHPKIPFEEDKVTNLHSVRVVAEASKPKPGVR

Query:  GSLKK
        GS KK
Subjt:  GSLKK
XP_022961022.1 uncharacterized protein LOC111461652 [Cucurbita moschata]2.4e-4790.48Show/hide
Query:  MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGIADRTGQDKGGHAKFECPYCKITAPDVKTMQIHHESKHPKIPFEEDKVTNLHSVRVVAEASKPKPGVR
        MTGKAKPKKHTAKEI AKIDAATTNRGGGKAG+ADR+GQ+KGGHAKFECP+CKITAPDVKTMQIHHESKHPKIP+EEDKV NLH+VRV AEASKPKPGVR
Subjt:  MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGIADRTGQDKGGHAKFECPYCKITAPDVKTMQIHHESKHPKIPFEEDKVTNLHSVRVVAEASKPKPGVR

Query:  GSLKK
        GS KK
Subjt:  GSLKK
XP_023516233.1 uncharacterized protein LOC111780149 [Cucurbita pepo subsp. pepo]3.2e-4789.52Show/hide
Query:  MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGIADRTGQDKGGHAKFECPYCKITAPDVKTMQIHHESKHPKIPFEEDKVTNLHSVRVVAEASKPKPGVR
        MTGKAKPKKHTAKEI AKIDAATTNRGGGKAG+ADR+GQ+KGGHAKFECP+CK+TAPDVKTMQIHHESKHPKIP+EEDKV NLH+VRV AEASKPKPGVR
Subjt:  MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGIADRTGQDKGGHAKFECPYCKITAPDVKTMQIHHESKHPKIPFEEDKVTNLHSVRVVAEASKPKPGVR

Query:  GSLKK
        GS KK
Subjt:  GSLKK
XP_038901282.1 protein METHYLENE BLUE SENSITIVITY 1-like [Benincasa hispida]4.1e-4789.52Show/hide
Query:  MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGIADRTGQDKGGHAKFECPYCKITAPDVKTMQIHHESKHPKIPFEEDKVTNLHSVRVVAEASKPKPGVR
        MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAG+ADR+GQ+KGGHAKFECP+CKITAPDVK+MQIHHESKHPKIP+EEDKV NLH+VRV A+ASKPKPGVR
Subjt:  MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGIADRTGQDKGGHAKFECPYCKITAPDVKTMQIHHESKHPKIPFEEDKVTNLHSVRVVAEASKPKPGVR

Query:  GSLKK
        GS KK
Subjt:  GSLKK
TrEMBL top hitse value%identityAlignment
A0A1S3B9F4 uncharacterized protein LOC1034872305.3e-4891.43Show/hide
Query:  MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGIADRTGQDKGGHAKFECPYCKITAPDVKTMQIHHESKHPKIPFEEDKVTNLHSVRVVAEASKPKPGVR
        MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAG+ADR+G +KGGHAKFECP+CKITAPDVK+MQIHHESKHPKIPFEEDKVTNLH+VRV AEASKPKPGVR
Subjt:  MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGIADRTGQDKGGHAKFECPYCKITAPDVKTMQIHHESKHPKIPFEEDKVTNLHSVRVVAEASKPKPGVR

Query:  GSLKK
        GS KK
Subjt:  GSLKK
A0A5A7T9G3 Zinc finger (C2H2 type) family protein5.3e-4891.43Show/hide
Query:  MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGIADRTGQDKGGHAKFECPYCKITAPDVKTMQIHHESKHPKIPFEEDKVTNLHSVRVVAEASKPKPGVR
        MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAG+ADR+G +KGGHAKFECP+CKITAPDVK+MQIHHESKHPKIPFEEDKVTNLH+VRV AEASKPKPGVR
Subjt:  MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGIADRTGQDKGGHAKFECPYCKITAPDVKTMQIHHESKHPKIPFEEDKVTNLHSVRVVAEASKPKPGVR

Query:  GSLKK
        GS KK
Subjt:  GSLKK
A0A5D3D8D3 Zinc finger (C2H2 type) family protein4.4e-4790.48Show/hide
Query:  MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGIADRTGQDKGGHAKFECPYCKITAPDVKTMQIHHESKHPKIPFEEDKVTNLHSVRVVAEASKPKPGVR
        MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAG+ADR+G +KGGHAKFECP+CKITAPDVK+MQIHHESKHPKIPFEEDKVTNLH+VRV AEASK KPGVR
Subjt:  MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGIADRTGQDKGGHAKFECPYCKITAPDVKTMQIHHESKHPKIPFEEDKVTNLHSVRVVAEASKPKPGVR

Query:  GSLKK
        GS KK
Subjt:  GSLKK
A0A6J1H903 uncharacterized protein LOC1114616521.2e-4790.48Show/hide
Query:  MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGIADRTGQDKGGHAKFECPYCKITAPDVKTMQIHHESKHPKIPFEEDKVTNLHSVRVVAEASKPKPGVR
        MTGKAKPKKHTAKEI AKIDAATTNRGGGKAG+ADR+GQ+KGGHAKFECP+CKITAPDVKTMQIHHESKHPKIP+EEDKV NLH+VRV AEASKPKPGVR
Subjt:  MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGIADRTGQDKGGHAKFECPYCKITAPDVKTMQIHHESKHPKIPFEEDKVTNLHSVRVVAEASKPKPGVR

Query:  GSLKK
        GS KK
Subjt:  GSLKK
A0A6J1JHR8 uncharacterized protein LOC1114858221.2e-4790.48Show/hide
Query:  MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGIADRTGQDKGGHAKFECPYCKITAPDVKTMQIHHESKHPKIPFEEDKVTNLHSVRVVAEASKPKPGVR
        MTGKAKPKKHTAKEI AKIDAATTNRGGGKAG+ADR+GQ+KGGHAKFECP+CKITAPDVKTMQIHHESKHPKIP+EEDKV NLH+VRV AEASKPKPGVR
Subjt:  MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGIADRTGQDKGGHAKFECPYCKITAPDVKTMQIHHESKHPKIPFEEDKVTNLHSVRVVAEASKPKPGVR

Query:  GSLKK
        GS KK
Subjt:  GSLKK
SwissProt top hitse value%identityAlignment
Q9FFD8 Protein METHYLENE BLUE SENSITIVITY 25.1e-4075.47Show/hide
Query:  MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGIADRTGQDKGGHAKFECPYCKITAPDVKTMQIHHESKHPKIPFEEDKVTNLH-SVRVVAEASKPKPGV
        MTGKAKPKKHTAKE+ AK DAA TNRGGGKAG+ADRTG++KGGHAK+ECP+CKIT PD+KTMQIHHESKHPK+ +EE +  NLH ++   AE+SKPKPG+
Subjt:  MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGIADRTGQDKGGHAKFECPYCKITAPDVKTMQIHHESKHPKIPFEEDKVTNLH-SVRVVAEASKPKPGV

Query:  RGSLKK
        RGSLKK
Subjt:  RGSLKK
Q9M8S0 Protein METHYLENE BLUE SENSITIVITY 11.4e-4279.05Show/hide
Query:  MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGIADRTGQDKGGHAKFECPYCKITAPDVKTMQIHHESKHPKIPFEEDKVTNLHSVRVVAEASKPKPGVR
        MTGKAKPKKHTAKEI AKIDAA TNRGGGKAGIADRTG++KGGHAK+ECP+CKITAP +KTMQIHHESKHP I +EE K+ NLH+V      SKPKPG+R
Subjt:  MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGIADRTGQDKGGHAKFECPYCKITAPDVKTMQIHHESKHPKIPFEEDKVTNLHSVRVVAEASKPKPGVR

Query:  GSLKK
        GSLKK
Subjt:  GSLKK
Arabidopsis top hitse value%identityAlignment
AT3G02790.1 zinc finger (C2H2 type) family protein1.0e-4379.05Show/hide
Query:  MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGIADRTGQDKGGHAKFECPYCKITAPDVKTMQIHHESKHPKIPFEEDKVTNLHSVRVVAEASKPKPGVR
        MTGKAKPKKHTAKEI AKIDAA TNRGGGKAGIADRTG++KGGHAK+ECP+CKITAP +KTMQIHHESKHP I +EE K+ NLH+V      SKPKPG+R
Subjt:  MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGIADRTGQDKGGHAKFECPYCKITAPDVKTMQIHHESKHPKIPFEEDKVTNLHSVRVVAEASKPKPGVR

Query:  GSLKK
        GSLKK
Subjt:  GSLKK
AT5G16470.1 zinc finger (C2H2 type) family protein3.6e-4175.47Show/hide
Query:  MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGIADRTGQDKGGHAKFECPYCKITAPDVKTMQIHHESKHPKIPFEEDKVTNLH-SVRVVAEASKPKPGV
        MTGKAKPKKHTAKE+ AK DAA TNRGGGKAG+ADRTG++KGGHAK+ECP+CKIT PD+KTMQIHHESKHPK+ +EE +  NLH ++   AE+SKPKPG+
Subjt:  MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGIADRTGQDKGGHAKFECPYCKITAPDVKTMQIHHESKHPKIPFEEDKVTNLH-SVRVVAEASKPKPGV

Query:  RGSLKK
        RGSLKK
Subjt:  RGSLKK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGGGGAAGGCGAAGCCGAAGAAGCACACCGCCAAAGAGATCGCTGCGAAGATCGACGCAGCCACCACCAACAGGGGCGGCGGAAAGGCCGGAATCGCCGACCGGAC
CGGCCAAGATAAGGGCGGCCATGCCAAGTTCGAGTGTCCGTACTGCAAGATCACGGCGCCGGATGTGAAGACTATGCAGATTCATCACGAGTCCAAGCATCCCAAAATCC
CTTTCGAGGAGGACAAGGTTACAAATCTCCACTCTGTTCGTGTTGTTGCCGAGGCCTCAAAGCCCAAACCGGGTGTCAGAGGTAGCCTCAAGAAGTGA
mRNA sequenceShow/hide mRNA sequence
AAATGACCTCGTGAAAGTTGAAACAACAGGGCTCAATCACCTACTCCTGCGCCCATTGTTTTCCATCCTCCCACCCAATGGAATATCTTCAGGTAACCAATCTCACGTAA
ACACGACCGCAGAGGATTGTCAAGAATACCGAATTAGAGCCATATAAATAAAGCAAACGCCAACGATAGGTTTCGCCCAAACTAGGGTTTCTCCCCATCAATCATCGTTT
TATCGACAAAATTTCCCCTCAAATCTGCGCGAAAAAGCTTTCGATTTGAATTTTCCTGTTCTTCATTGGATTCGATTTGCATCGATAAATCAATTGATCAACCATGACGG
GGAAGGCGAAGCCGAAGAAGCACACCGCCAAAGAGATCGCTGCGAAGATCGACGCAGCCACCACCAACAGGGGCGGCGGAAAGGCCGGAATCGCCGACCGGACCGGCCAA
GATAAGGGCGGCCATGCCAAGTTCGAGTGTCCGTACTGCAAGATCACGGCGCCGGATGTGAAGACTATGCAGATTCATCACGAGTCCAAGCATCCCAAAATCCCTTTCGA
GGAGGACAAGGTTACAAATCTCCACTCTGTTCGTGTTGTTGCCGAGGCCTCAAAGCCCAAACCGGGTGTCAGAGGTAGCCTCAAGAAGTGATGGAATCCAAGTTTCAGGA
TGATTAACGCTGATGATGATGATGATGATGATTATGGTGGGTGGGCTCAATTCTATGCTATTGGGTACTTTGGTTTTTTTTTTCTCTTATTATTATTATTATCTCGGTCT
TTCTATGCTTTGTCTCTGTTGCTGATGGATGCTGGCTTAACGTGTAAGATGTTTGATTAAAACATATTATATGTCCTTGGAGCTTCGGTCTTCGTCTTCCTTCTTGAGAT
TGATGCAGTTATGTTTATGTATATTACATAACAAATATGATCGTAGTTGTTATGGTAACAGATGGACGTGTTCGTCAAAATTAGAGTGGCTTCGTCAAAAATAAACCTTG
GTATTTTGTTTTCGAATGTTATGGGCTTAAGATCTTCGTGA
Protein sequenceShow/hide protein sequence
MTGKAKPKKHTAKEIAAKIDAATTNRGGGKAGIADRTGQDKGGHAKFECPYCKITAPDVKTMQIHHESKHPKIPFEEDKVTNLHSVRVVAEASKPKPGVRGSLKK