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Sed0011485 (gene) of Chayote v1 genome

Gene IDSed0011485
OrganismSechium edule (Chayote v1)
DescriptionSAUR-like auxin-responsive protein family
Genome locationLG14:4000694..4001068
RNA-Seq ExpressionSed0011485
SyntenySed0011485
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063814.1 auxin-responsive protein SAUR40-like [Cucumis melo var. makuwa]7.8e-5388.62Show/hide
Query:  LRLFVAMLQKSLSPLLSKEPKPESFDEEFEAAVTVPKDVEEGQFVVFAADGDERKRFVINLEFLSNPAFLRLLELAKEEYGFQQKGALTVPCRPEELEKI
        LRL +A+LQKSLSPLLSKEPKPESF EEFEAA TVPKDVEEG FVVFA DGDERKRFVINLEFLSNP FLRLLELAKEEYGFQQKGALTVPCRPEEL+KI
Subjt:  LRLFVAMLQKSLSPLLSKEPKPESFDEEFEAAVTVPKDVEEGQFVVFAADGDERKRFVINLEFLSNPAFLRLLELAKEEYGFQQKGALTVPCRPEELEKI

Query:  VENRRKQKNGKWIASSVHIISSY
        VE RRKQK+G+WIASSVHII+S+
Subjt:  VENRRKQKNGKWIASSVHIISSY

KAG6604402.1 Auxin-responsive protein SAUR72, partial [Cucurbita argyrosperma subsp. sororia]3.9e-5286.99Show/hide
Query:  LRLFVAMLQKSLSPLLSKEPKPESFDEEFEAAVTVPKDVEEGQFVVFAADGDERKRFVINLEFLSNPAFLRLLELAKEEYGFQQKGALTVPCRPEELEKI
        LRLF++MLQKSLSPL+SKEPK +SFDEEF+AAV VPKDVEEG FVVFAADGDERKRFVINL+FLSNPAFLRLLELAKEEYGFQQKGALTVPC PEEL+KI
Subjt:  LRLFVAMLQKSLSPLLSKEPKPESFDEEFEAAVTVPKDVEEGQFVVFAADGDERKRFVINLEFLSNPAFLRLLELAKEEYGFQQKGALTVPCRPEELEKI

Query:  VENRRKQKNGKWIASSVHIISSY
        VE RRKQK G+WIASSVHII+ Y
Subjt:  VENRRKQKNGKWIASSVHIISSY

XP_022977263.1 uncharacterized protein LOC111477631 [Cucurbita maxima]3.9e-5286.99Show/hide
Query:  LRLFVAMLQKSLSPLLSKEPKPESFDEEFEAAVTVPKDVEEGQFVVFAADGDERKRFVINLEFLSNPAFLRLLELAKEEYGFQQKGALTVPCRPEELEKI
        LRLF++MLQKSLSPL+SKEPK +SFDEEF+AAV VPKDVEEG FVVFAADGDERKRFVINL+FLSNPAFLRLLELAKEEYGFQQKGALTVPC PEEL+KI
Subjt:  LRLFVAMLQKSLSPLLSKEPKPESFDEEFEAAVTVPKDVEEGQFVVFAADGDERKRFVINLEFLSNPAFLRLLELAKEEYGFQQKGALTVPCRPEELEKI

Query:  VENRRKQKNGKWIASSVHIISSY
        VE RRKQK G+WIASSVHII+ Y
Subjt:  VENRRKQKNGKWIASSVHIISSY

XP_023543955.1 uncharacterized protein LOC111803675 [Cucurbita pepo subsp. pepo]3.9e-5286.99Show/hide
Query:  LRLFVAMLQKSLSPLLSKEPKPESFDEEFEAAVTVPKDVEEGQFVVFAADGDERKRFVINLEFLSNPAFLRLLELAKEEYGFQQKGALTVPCRPEELEKI
        LRLF++MLQKSLSPL+SKEPK +SFDEEF+AAV VPKDVEEG FVVFAADGDERKRFVINL+FLSNPAFLRLLELAKEEYGFQQKGALTVPC PEEL+KI
Subjt:  LRLFVAMLQKSLSPLLSKEPKPESFDEEFEAAVTVPKDVEEGQFVVFAADGDERKRFVINLEFLSNPAFLRLLELAKEEYGFQQKGALTVPCRPEELEKI

Query:  VENRRKQKNGKWIASSVHIISSY
        VE RRKQK G+WIASSVHII+ Y
Subjt:  VENRRKQKNGKWIASSVHIISSY

XP_038881209.1 auxin-responsive protein SAUR71-like [Benincasa hispida]1.2e-5388.71Show/hide
Query:  MLRLFVAMLQKSLSPLLSKEPKPESFDEEFEAAVTVPKDVEEGQFVVFAADGDERKRFVINLEFLSNPAFLRLLELAKEEYGFQQKGALTVPCRPEELEK
        ML+LF+A+LQKSLSPLLSKE KPESFDEEFEAA+TVPKDVEEG FVVFA DGDERKRFVINLEFLSNP FLRLLELAKEEYGFQQKGALTVPC PEEL+K
Subjt:  MLRLFVAMLQKSLSPLLSKEPKPESFDEEFEAAVTVPKDVEEGQFVVFAADGDERKRFVINLEFLSNPAFLRLLELAKEEYGFQQKGALTVPCRPEELEK

Query:  IVENRRKQKNGKWIASSVHIISSY
        IVE RRKQK+G+WIASSVHII+SY
Subjt:  IVENRRKQKNGKWIASSVHIISSY

TrEMBL top hitse value%identityAlignment
A0A0A0KEQ9 Uncharacterized protein2.1e-5186.99Show/hide
Query:  LRLFVAMLQKSLSPLLSKEPKPESFDEEFEAAVTVPKDVEEGQFVVFAADGDERKRFVINLEFLSNPAFLRLLELAKEEYGFQQKGALTVPCRPEELEKI
        LRL +A+LQKSLSPLLSKE + ESF EEFEAA TVPKDVEEG FVVFA DGDERKRFVINLEFLSNP FLRLLELAKEEYGFQQKGALTVPCRPEEL+KI
Subjt:  LRLFVAMLQKSLSPLLSKEPKPESFDEEFEAAVTVPKDVEEGQFVVFAADGDERKRFVINLEFLSNPAFLRLLELAKEEYGFQQKGALTVPCRPEELEKI

Query:  VENRRKQKNGKWIASSVHIISSY
        VE RRKQKNG+WIASSVHII+S+
Subjt:  VENRRKQKNGKWIASSVHIISSY

A0A2P6RAY9 Putative small auxin-up RNA2.3e-2661.82Show/hide
Query:  LRLFVAMLQKSLSPLLSKEP---KPESFDEEFEAAVTVPKDVEEGQFVVFAADGDERKRFVINLEFLSNPAFLRLLELAKEEYGFQQKGALTVPCRPEEL
        LRL +  LQK L  L +K P   + + FDE+ + A  VP+DV+EG F VFA  G E KRFVI LE L+NPAFL+LLE AKEEYGFQQKGAL VPCRPE+L
Subjt:  LRLFVAMLQKSLSPLLSKEP---KPESFDEEFEAAVTVPKDVEEGQFVVFAADGDERKRFVINLEFLSNPAFLRLLELAKEEYGFQQKGALTVPCRPEEL

Query:  EKIVENRRKQ
         KI+ENRR++
Subjt:  EKIVENRRKQ

A0A5A7V9B1 Auxin-responsive protein SAUR40-like3.8e-5388.62Show/hide
Query:  LRLFVAMLQKSLSPLLSKEPKPESFDEEFEAAVTVPKDVEEGQFVVFAADGDERKRFVINLEFLSNPAFLRLLELAKEEYGFQQKGALTVPCRPEELEKI
        LRL +A+LQKSLSPLLSKEPKPESF EEFEAA TVPKDVEEG FVVFA DGDERKRFVINLEFLSNP FLRLLELAKEEYGFQQKGALTVPCRPEEL+KI
Subjt:  LRLFVAMLQKSLSPLLSKEPKPESFDEEFEAAVTVPKDVEEGQFVVFAADGDERKRFVINLEFLSNPAFLRLLELAKEEYGFQQKGALTVPCRPEELEKI

Query:  VENRRKQKNGKWIASSVHIISSY
        VE RRKQK+G+WIASSVHII+S+
Subjt:  VENRRKQKNGKWIASSVHIISSY

A0A6J1EC89 uncharacterized protein LOC1114330027.1e-5286.99Show/hide
Query:  LRLFVAMLQKSLSPLLSKEPKPESFDEEFEAAVTVPKDVEEGQFVVFAADGDERKRFVINLEFLSNPAFLRLLELAKEEYGFQQKGALTVPCRPEELEKI
        LRLF++MLQKSLSPL+SKEPK +SFDEEF AAV VPKDVEEG FVVFAADGDERKRFVINL+FLSNPAFLRLLELAKEEYGFQQKGALTVPC PEEL+KI
Subjt:  LRLFVAMLQKSLSPLLSKEPKPESFDEEFEAAVTVPKDVEEGQFVVFAADGDERKRFVINLEFLSNPAFLRLLELAKEEYGFQQKGALTVPCRPEELEKI

Query:  VENRRKQKNGKWIASSVHIISSY
        VE RRKQK G WIASSVHII+ Y
Subjt:  VENRRKQKNGKWIASSVHIISSY

A0A6J1IPG4 uncharacterized protein LOC1114776311.9e-5286.99Show/hide
Query:  LRLFVAMLQKSLSPLLSKEPKPESFDEEFEAAVTVPKDVEEGQFVVFAADGDERKRFVINLEFLSNPAFLRLLELAKEEYGFQQKGALTVPCRPEELEKI
        LRLF++MLQKSLSPL+SKEPK +SFDEEF+AAV VPKDVEEG FVVFAADGDERKRFVINL+FLSNPAFLRLLELAKEEYGFQQKGALTVPC PEEL+KI
Subjt:  LRLFVAMLQKSLSPLLSKEPKPESFDEEFEAAVTVPKDVEEGQFVVFAADGDERKRFVINLEFLSNPAFLRLLELAKEEYGFQQKGALTVPCRPEELEKI

Query:  VENRRKQKNGKWIASSVHIISSY
        VE RRKQK G+WIASSVHII+ Y
Subjt:  VENRRKQKNGKWIASSVHIISSY

SwissProt top hitse value%identityAlignment
O64538 Auxin-responsive protein SAUR401.8e-0738.89Show/hide
Query:  TVPKDVEEGQFVVFAADGDERKRFVINLEFLSNPAFLRLLELAKEEYGFQQKGALTVPCRPEELEKIVENRR
        TV   V  G   V    G++++RFV++ E L++P F+ LL  + +EYG+ QKG L +PC     E++VE+ R
Subjt:  TVPKDVEEGQFVVFAADGDERKRFVINLEFLSNPAFLRLLELAKEEYGFQQKGALTVPCRPEELEKIVENRR

Q9LTV3 Auxin-responsive protein SAUR722.1e-0837.37Show/hide
Query:  SPLLSKEPKPESFDEEF-EAAVT-----VPKDVEEGQFVVFAADGDERKRFVINLEFLSNPAFLRLLELAKEEYGFQQKGALTVPCRPEELEKIVENRR
        S L S   +P    E F  ++VT         V EG   V+   GDE +RFV++ E L++P F+ LL  + +EYG++QKG L +PC     E+I+E+ R
Subjt:  SPLLSKEPKPESFDEEF-EAAVT-----VPKDVEEGQFVVFAADGDERKRFVINLEFLSNPAFLRLLELAKEEYGFQQKGALTVPCRPEELEKIVENRR

Q9SA49 Auxin-responsive protein SAUR415.1e-0741.82Show/hide
Query:  GDERKRFVINLEFLSNPAFLRLLELAKEEYGFQQKGALTVPCRPEELEKIVENRR
        G+E +RFV++ E +++P F+ LL  + +EYG+ QKG L +PC     E++VE  R
Subjt:  GDERKRFVINLEFLSNPAFLRLLELAKEEYGFQQKGALTVPCRPEELEKIVENRR

Q9SGU2 Auxin-responsive protein SAUR713.5e-0841.79Show/hide
Query:  VEEGQFVVFAADGDERKRFVINLEFLSNPAFLRLLELAKEEYGFQQKGALTVPCRPEELEKIVENRR
        V EG   V+   G E +RFV+N E L++P F+ LL+ + +EYG++Q+G L +PC     E+I+E+ R
Subjt:  VEEGQFVVFAADGDERKRFVINLEFLSNPAFLRLLELAKEEYGFQQKGALTVPCRPEELEKIVENRR

Q9ZUZ3 Auxin-responsive protein SAUR322.5e-0934.78Show/hide
Query:  ESFDEEFEAAVTVPKDVEEGQFVV-FAADGDERKRFVINLEFLSNPAFLRLLELAKEEYGFQQKGALTVPCRPEE---LEKIVENRRKQKNG
        +SF    + +V V KDV +G   +   + G+E++RF++ + + ++P F++LL+ A++EYGF QKG +T+PC  EE   ++ +++  R   NG
Subjt:  ESFDEEFEAAVTVPKDVEEGQFVV-FAADGDERKRFVINLEFLSNPAFLRLLELAKEEYGFQQKGALTVPCRPEE---LEKIVENRRKQKNG

Arabidopsis top hitse value%identityAlignment
AT2G28085.1 SAUR-like auxin-responsive protein family1.1e-1549.43Show/hide
Query:  SKEPKPESFDEEFEAAVTVPKDVEEGQFVVFAADG--DERKRFVINLEFLSNPAFLRLLELAKEEYGFQQKGALTVPCRPEELEKIV
        +K+P PE +  +      VPKDV+EG F V A DG  +  +RFV+ L FL +P F +LLE A+EEYGF   GAL VPCRP  L  I+
Subjt:  SKEPKPESFDEEFEAAVTVPKDVEEGQFVVFAADG--DERKRFVINLEFLSNPAFLRLLELAKEEYGFQQKGALTVPCRPEELEKIV

AT2G46690.1 SAUR-like auxin-responsive protein family1.7e-1034.78Show/hide
Query:  ESFDEEFEAAVTVPKDVEEGQFVV-FAADGDERKRFVINLEFLSNPAFLRLLELAKEEYGFQQKGALTVPCRPEE---LEKIVENRRKQKNG
        +SF    + +V V KDV +G   +   + G+E++RF++ + + ++P F++LL+ A++EYGF QKG +T+PC  EE   ++ +++  R   NG
Subjt:  ESFDEEFEAAVTVPKDVEEGQFVV-FAADGDERKRFVINLEFLSNPAFLRLLELAKEEYGFQQKGALTVPCRPEE---LEKIVENRRKQKNG

AT3G09870.1 SAUR-like auxin-responsive protein family4.1e-2053.66Show/hide
Query:  FDEEFEAAVTVPKDVEEGQFVVFAADGDERKRFVINLEFLSNPAFLRLLELAKEEYGFQQKGALTVPCRPEELEKIVENRRK
        F+EE  AA  +P DV+EG   V A  G+  KRFV+ LE L+ P FLRLLE A+EE+GFQ +G LT+PC+PEE++KI++  R+
Subjt:  FDEEFEAAVTVPKDVEEGQFVVFAADGDERKRFVINLEFLSNPAFLRLLELAKEEYGFQQKGALTVPCRPEELEKIVENRRK

AT5G20810.1 SAUR-like auxin-responsive protein family3.0e-1040.59Show/hide
Query:  LSPLLSK---EPKPESFDEEFEAAVTVPKDVEEGQFVVFAADGDERKRFVINLEFLSNPAFLRLLELAKEEYGFQQKGALTVPCRPEE---LEKIVENRR
        +SP ++K   + K    DEE   +   P DV +G   V+   G E +RF+I   +LS+  F  LLE A+EE+GF Q GALT+PC  E    L K +EN  
Subjt:  LSPLLSK---EPKPESFDEEFEAAVTVPKDVEEGQFVVFAADGDERKRFVINLEFLSNPAFLRLLELAKEEYGFQQKGALTVPCRPEE---LEKIVENRR

Query:  K
        K
Subjt:  K

AT5G20810.2 SAUR-like auxin-responsive protein family3.0e-1040.59Show/hide
Query:  LSPLLSK---EPKPESFDEEFEAAVTVPKDVEEGQFVVFAADGDERKRFVINLEFLSNPAFLRLLELAKEEYGFQQKGALTVPCRPEE---LEKIVENRR
        +SP ++K   + K    DEE   +   P DV +G   V+   G E +RF+I   +LS+  F  LLE A+EE+GF Q GALT+PC  E    L K +EN  
Subjt:  LSPLLSK---EPKPESFDEEFEAAVTVPKDVEEGQFVVFAADGDERKRFVINLEFLSNPAFLRLLELAKEEYGFQQKGALTVPCRPEE---LEKIVENRR

Query:  K
        K
Subjt:  K


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTAAGGTTATTTGTAGCCATGCTCCAAAAGAGCCTCTCCCCACTGCTATCTAAAGAACCTAAACCAGAAAGTTTCGATGAAGAATTCGAAGCAGCGGTTACGGTGCC
GAAAGATGTGGAAGAAGGCCAGTTTGTGGTGTTTGCAGCTGATGGTGATGAGAGAAAGAGATTTGTTATTAATTTGGAGTTCTTGTCTAACCCTGCATTCTTAAGGCTAT
TGGAGCTGGCAAAGGAAGAATATGGATTTCAACAGAAGGGAGCTCTAACAGTCCCTTGTAGGCCTGAGGAACTAGAGAAGATTGTAGAAAACAGAAGAAAACAGAAAAAT
GGGAAGTGGATTGCATCCAGTGTTCATATCATAAGTAGCTATTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTAAGGTTATTTGTAGCCATGCTCCAAAAGAGCCTCTCCCCACTGCTATCTAAAGAACCTAAACCAGAAAGTTTCGATGAAGAATTCGAAGCAGCGGTTACGGTGCC
GAAAGATGTGGAAGAAGGCCAGTTTGTGGTGTTTGCAGCTGATGGTGATGAGAGAAAGAGATTTGTTATTAATTTGGAGTTCTTGTCTAACCCTGCATTCTTAAGGCTAT
TGGAGCTGGCAAAGGAAGAATATGGATTTCAACAGAAGGGAGCTCTAACAGTCCCTTGTAGGCCTGAGGAACTAGAGAAGATTGTAGAAAACAGAAGAAAACAGAAAAAT
GGGAAGTGGATTGCATCCAGTGTTCATATCATAAGTAGCTATTAG
Protein sequenceShow/hide protein sequence
MLRLFVAMLQKSLSPLLSKEPKPESFDEEFEAAVTVPKDVEEGQFVVFAADGDERKRFVINLEFLSNPAFLRLLELAKEEYGFQQKGALTVPCRPEELEKIVENRRKQKN
GKWIASSVHIISSY