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Sed0011504 (gene) of Chayote v1 genome

Gene IDSed0011504
OrganismSechium edule (Chayote v1)
DescriptionTify domain-containing protein
Genome locationLG06:152522..153657
RNA-Seq ExpressionSed0011504
SyntenySed0011504
Gene Ontology termsGO:0048583 - regulation of response to stimulus (biological process)
InterPro domainsIPR010399 - Tify domain
IPR018467 - CO/COL/TOC1, conserved site
IPR040390 - TIFY/JAZ family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004144433.1 protein TIFY 10a [Cucumis sativus]7.6e-2445.26Show/hide
Query:  SSFAQTCNLLRQYLKERRSIA---RIEPKQQ------------------------------------------EMTIFYAGQVMVFDHLPSERAEEVMAM
        SSFAQTCNLL QYLKE+R++A   RIEPK +                                          +MTIFY G+V+VF+ LPSERAEE+MAM
Subjt:  SSFAQTCNLLRQYLKERRSIA---RIEPKQQ------------------------------------------EMTIFYAGQVMVFDHLPSERAEEVMAM

Query:  AANAI----------------PEPI-KASGDLPIARRASLHRFLEKRKDRAAVRAPYQLHYSASSSKPAAHN-----GNQQSSNQFDLNL
        A   I                 +P+ K S DLPIARRASLHRF EKRKDR A R PYQ++  A SSKP+  +      N+QSS QFDLNL
Subjt:  AANAI----------------PEPI-KASGDLPIARRASLHRFLEKRKDRAAVRAPYQLHYSASSSKPAAHN-----GNQQSSNQFDLNL

XP_008460319.1 PREDICTED: protein TIFY 10c-like [Cucumis melo]4.0e-2546.32Show/hide
Query:  SSFAQTCNLLRQYLKERRSIA---RIEPKQQ------------------------------------------EMTIFYAGQVMVFDHLPSERAEEVMAM
        SSFAQTCNLL QYLKE+RS+A   RIEPK +                                          +MTIFY G+V+VF+ LPSERAEE+MAM
Subjt:  SSFAQTCNLLRQYLKERRSIA---RIEPKQQ------------------------------------------EMTIFYAGQVMVFDHLPSERAEEVMAM

Query:  AANAI----------------PEPI-KASGDLPIARRASLHRFLEKRKDRAAVRAPYQLHYSASSSKPAAHN-----GNQQSSNQFDLNL
        A   I                 +P+ K S DLPIARRASLHRF EKRKDR A R PYQ++  A SSKP+  +     GN+QSS QFDLNL
Subjt:  AANAI----------------PEPI-KASGDLPIARRASLHRFLEKRKDRAAVRAPYQLHYSASSSKPAAHN-----GNQQSSNQFDLNL

XP_022148111.1 protein TIFY 11B-like [Momordica charantia]4.0e-2549.71Show/hide
Query:  SSFAQTCNLLRQYLKERRSIA----RIEPKQQ--------------------------EMTIFYAGQVMVFDHLPSERAEEVMAMAANAI----------
        SSFAQTCNLL QYLKE+RS+      IEPK +                          +MTIFY G+V+VF+ LP ERAEE+MAMA              
Subjt:  SSFAQTCNLLRQYLKERRSIA----RIEPKQQ--------------------------EMTIFYAGQVMVFDHLPSERAEEVMAMAANAI----------

Query:  ------PEP-IKASGDLPIARRASLHRFLEKRKDRAAVRAPYQLH---YSASSSKPAAHNGNQQSSNQFDLNL
              P+P  KA GDLPIARRASLHRF EKRKDRAA RAPYQ++   YSASS        N +SSN FDLNL
Subjt:  ------PEP-IKASGDLPIARRASLHRFLEKRKDRAAVRAPYQLH---YSASSSKPAAHNGNQQSSNQFDLNL

XP_023527028.1 protein TIFY 10b-like [Cucurbita pepo subsp. pepo]7.6e-2444.33Show/hide
Query:  SSFAQTCNLLRQYLKERRSIA---RIEPKQQ----------------------------------EMTIFYAGQVMVFDHLPSERAEEVMAMAANAI---
        SSFAQTCNLL QYLKE+RS+    RIEPK +                                  +MTIFY G+V+VF+ LPSE+AEE+M MA   I   
Subjt:  SSFAQTCNLLRQYLKERRSIA---RIEPKQQ----------------------------------EMTIFYAGQVMVFDHLPSERAEEVMAMAANAI---

Query:  --------------------PEPIKASGDLPIARRASLHRFLEKRKDRAAVRAPYQLH---YSASSS--------KPAAHNGNQQSSNQFDLNL
                              P K SGDLPIARRASLHRF EKRKDR   RAPYQ++   YS SS+        K       QQSSNQFDLNL
Subjt:  --------------------PEPIKASGDLPIARRASLHRFLEKRKDRAAVRAPYQLH---YSASSS--------KPAAHNGNQQSSNQFDLNL

XP_038881485.1 protein TIFY 10a-like [Benincasa hispida]7.6e-2447.67Show/hide
Query:  SSFAQTCNLLRQYLKERRSIARIEPKQQ----------------------------------EMTIFYAGQVMVFDHLPSERAEEVMAMAANAI------
        SSFAQTCNLL QYLKE+RS+  I PK +                                  +MTIFY G+V+VF+ L SERAEE+MAMA   I      
Subjt:  SSFAQTCNLLRQYLKERRSIARIEPKQQ----------------------------------EMTIFYAGQVMVFDHLPSERAEEVMAMAANAI------

Query:  --------PEPI-KASGDLPIARRASLHRFLEKRKDRAAVRAPYQLHYSASSSKPAAHNGNQQSSNQFDLNL
                 +P+ K S DLPIARRASLHRF EKRKDR A R+PYQ++  + S +     GNQQSSNQFDLNL
Subjt:  --------PEPI-KASGDLPIARRASLHRFLEKRKDRAAVRAPYQLHYSASSSKPAAHNGNQQSSNQFDLNL

TrEMBL top hitse value%identityAlignment
A0A0A0LEE6 Tify domain-containing protein3.7e-2445.26Show/hide
Query:  SSFAQTCNLLRQYLKERRSIA---RIEPKQQ------------------------------------------EMTIFYAGQVMVFDHLPSERAEEVMAM
        SSFAQTCNLL QYLKE+R++A   RIEPK +                                          +MTIFY G+V+VF+ LPSERAEE+MAM
Subjt:  SSFAQTCNLLRQYLKERRSIA---RIEPKQQ------------------------------------------EMTIFYAGQVMVFDHLPSERAEEVMAM

Query:  AANAI----------------PEPI-KASGDLPIARRASLHRFLEKRKDRAAVRAPYQLHYSASSSKPAAHN-----GNQQSSNQFDLNL
        A   I                 +P+ K S DLPIARRASLHRF EKRKDR A R PYQ++  A SSKP+  +      N+QSS QFDLNL
Subjt:  AANAI----------------PEPI-KASGDLPIARRASLHRFLEKRKDRAAVRAPYQLHYSASSSKPAAHN-----GNQQSSNQFDLNL

A0A1S3CCP0 protein TIFY 10c-like1.9e-2546.32Show/hide
Query:  SSFAQTCNLLRQYLKERRSIA---RIEPKQQ------------------------------------------EMTIFYAGQVMVFDHLPSERAEEVMAM
        SSFAQTCNLL QYLKE+RS+A   RIEPK +                                          +MTIFY G+V+VF+ LPSERAEE+MAM
Subjt:  SSFAQTCNLLRQYLKERRSIA---RIEPKQQ------------------------------------------EMTIFYAGQVMVFDHLPSERAEEVMAM

Query:  AANAI----------------PEPI-KASGDLPIARRASLHRFLEKRKDRAAVRAPYQLHYSASSSKPAAHN-----GNQQSSNQFDLNL
        A   I                 +P+ K S DLPIARRASLHRF EKRKDR A R PYQ++  A SSKP+  +     GN+QSS QFDLNL
Subjt:  AANAI----------------PEPI-KASGDLPIARRASLHRFLEKRKDRAAVRAPYQLHYSASSSKPAAHN-----GNQQSSNQFDLNL

A0A5A7UE71 Protein TIFY 10c-like1.9e-2546.32Show/hide
Query:  SSFAQTCNLLRQYLKERRSIA---RIEPKQQ------------------------------------------EMTIFYAGQVMVFDHLPSERAEEVMAM
        SSFAQTCNLL QYLKE+RS+A   RIEPK +                                          +MTIFY G+V+VF+ LPSERAEE+MAM
Subjt:  SSFAQTCNLLRQYLKERRSIA---RIEPKQQ------------------------------------------EMTIFYAGQVMVFDHLPSERAEEVMAM

Query:  AANAI----------------PEPI-KASGDLPIARRASLHRFLEKRKDRAAVRAPYQLHYSASSSKPAAHN-----GNQQSSNQFDLNL
        A   I                 +P+ K S DLPIARRASLHRF EKRKDR A R PYQ++  A SSKP+  +     GN+QSS QFDLNL
Subjt:  AANAI----------------PEPI-KASGDLPIARRASLHRFLEKRKDRAAVRAPYQLHYSASSSKPAAHN-----GNQQSSNQFDLNL

A0A6J1D4E0 protein TIFY 11B-like1.9e-2549.71Show/hide
Query:  SSFAQTCNLLRQYLKERRSIA----RIEPKQQ--------------------------EMTIFYAGQVMVFDHLPSERAEEVMAMAANAI----------
        SSFAQTCNLL QYLKE+RS+      IEPK +                          +MTIFY G+V+VF+ LP ERAEE+MAMA              
Subjt:  SSFAQTCNLLRQYLKERRSIA----RIEPKQQ--------------------------EMTIFYAGQVMVFDHLPSERAEEVMAMAANAI----------

Query:  ------PEP-IKASGDLPIARRASLHRFLEKRKDRAAVRAPYQLH---YSASSSKPAAHNGNQQSSNQFDLNL
              P+P  KA GDLPIARRASLHRF EKRKDRAA RAPYQ++   YSASS        N +SSN FDLNL
Subjt:  ------PEP-IKASGDLPIARRASLHRFLEKRKDRAAVRAPYQLH---YSASSSKPAAHNGNQQSSNQFDLNL

A0A6J1K9M8 protein TIFY 10b-like8.2e-2444.44Show/hide
Query:  SSFAQTCNLLRQYLKERRSIA---RIEPKQQ-------------------------------------EMTIFYAGQVMVFDHLPSERAEEVMAMA----
        SSFAQTCNLL QYLKE+R +    RIEPK +                                     +MTIFY G+V+VF+ LPSERAEE+MAMA    
Subjt:  SSFAQTCNLLRQYLKERRSIA---RIEPKQQ-------------------------------------EMTIFYAGQVMVFDHLPSERAEEVMAMA----

Query:  -------------ANAIPEP--------IKASGDLPIARRASLHRFLEKRKDRAAVRAPYQL--HYSASSSKPAAHN--------GNQQSSNQFDLNL
                     +N + EP         K S DLPIARRASLHRF EKRKDR + RAPYQL     +SSSKPA  +        GNQ SSN FDLN+
Subjt:  -------------ANAIPEP--------IKASGDLPIARRASLHRFLEKRKDRAAVRAPYQL--HYSASSSKPAAHN--------GNQQSSNQFDLNL

SwissProt top hitse value%identityAlignment
A2Z1N3 Protein TIFY 10c1.2e-1142.72Show/hide
Query:  KQQEMTIFYAGQVMVFDHLPSERAEEVMAM--------------AANAIPEPIKAS-GDLPIARRASLHRFLEKRKDRAAVRAPYQLHYSASSSKPAAHN
        K Q++TIFY G+V+VF++ PS + ++++ +              A  ++P P   S  DLPIARR SLHRFLEKRK R    APYQ + +A+ SK A  N
Subjt:  KQQEMTIFYAGQVMVFDHLPSERAEEVMAM--------------AANAIPEPIKAS-GDLPIARRASLHRFLEKRKDRAAVRAPYQLHYSASSSKPAAHN

Query:  GNQ
        G++
Subjt:  GNQ

Q69P94 Protein TIFY 10c1.2e-1142.72Show/hide
Query:  KQQEMTIFYAGQVMVFDHLPSERAEEVMAM--------------AANAIPEPIKAS-GDLPIARRASLHRFLEKRKDRAAVRAPYQLHYSASSSKPAAHN
        K Q++TIFY G+V+VF++ PS + ++++ +              A  ++P P   S  DLPIARR SLHRFLEKRK R    APYQ + +A+ SK A  N
Subjt:  KQQEMTIFYAGQVMVFDHLPSERAEEVMAM--------------AANAIPEPIKAS-GDLPIARRASLHRFLEKRKDRAAVRAPYQLHYSASSSKPAAHN

Query:  GNQ
        G++
Subjt:  GNQ

Q84R94 Protein TIFY 10a4.5e-1136.84Show/hide
Query:  EPKQQEMTIFYAGQVMVFDHLPSERAEEVMAMAA--------------------------NAIPEPIKA---------------SGDLPIARRASLHRFL
        E +++++TIFY G+V+VFD  P+E+A+++M MA+                          +A+P P  A               + DLP AR+ASLHRFL
Subjt:  EPKQQEMTIFYAGQVMVFDHLPSERAEEVMAMAA--------------------------NAIPEPIKA---------------SGDLPIARRASLHRFL

Query:  EKRKDRAAVRAPYQ
        EKRKDR   +APYQ
Subjt:  EKRKDRAAVRAPYQ

Q9LMA8 Protein TIFY 10A1.8e-1240Show/hide
Query:  LKERRSIARIEPKQQ--EMTIFYAGQVMVFDHLPSERAEEVMAMA----------------------ANAIP--------EPIKAS----GDLPIARRAS
        LK  ++   ++P+ Q   +TIFYAGQV+VF+   +E+A+EV+ +A                      AN +P        EPI++S     +LPIARRAS
Subjt:  LKERRSIARIEPKQQ--EMTIFYAGQVMVFDHLPSERAEEVMAMA----------------------ANAIP--------EPIKAS----GDLPIARRAS

Query:  LHRFLEKRKDRAAVRAPYQLHYSASSSKPAAHNGN
        LHRFLEKRKDR   +APYQL   A +S      GN
Subjt:  LHRFLEKRKDRAAVRAPYQLHYSASSSKPAAHNGN

Q9S7M2 Protein TIFY 10B2.0e-1136.69Show/hide
Query:  QYLKERRSIARIEPKQQEMTIFYAGQVMVFDHLPSERAEEV------------------------------MAMAANAI-------------PEPIKASG
        Q +KE     + E +   +TIFY G+VMVFD   +E+A+EV                              +A + N +             P P   + 
Subjt:  QYLKERRSIARIEPKQQEMTIFYAGQVMVFDHLPSERAEEV------------------------------MAMAANAI-------------PEPIKASG

Query:  DLPIARRASLHRFLEKRKDRAAVRAPYQLHYSA-SSSKP
        +LPIARRASLHRFLEKRKDR   +APYQ+  SA +SSKP
Subjt:  DLPIARRASLHRFLEKRKDRAAVRAPYQLHYSA-SSSKP

Arabidopsis top hitse value%identityAlignment
AT1G17380.1 jasmonate-zim-domain protein 56.6e-1033.33Show/hide
Query:  LKERRSIARIEPKQQEMTIFYAGQVMVFDHLPSERAEEVMAMAANAIP-------EPI-------KASGDLP---------------------------I
        +K+   ++  +P   ++TIF+ G+V+V++  P ++A+E+M +A  A P        PI       K+S  LP                           I
Subjt:  LKERRSIARIEPKQQEMTIFYAGQVMVFDHLPSERAEEVMAMAANAIP-------EPI-------KASGDLP---------------------------I

Query:  ARRASLHRFLEKRKDRAAVRAPYQLHYSA
        ARRASLHRF  KRKDRA  RAPYQ++ +A
Subjt:  ARRASLHRFLEKRKDRAAVRAPYQLHYSA

AT1G19180.1 jasmonate-zim-domain protein 11.3e-1340Show/hide
Query:  LKERRSIARIEPKQQ--EMTIFYAGQVMVFDHLPSERAEEVMAMA----------------------ANAIP--------EPIKAS----GDLPIARRAS
        LK  ++   ++P+ Q   +TIFYAGQV+VF+   +E+A+EV+ +A                      AN +P        EPI++S     +LPIARRAS
Subjt:  LKERRSIARIEPKQQ--EMTIFYAGQVMVFDHLPSERAEEVMAMA----------------------ANAIP--------EPIKAS----GDLPIARRAS

Query:  LHRFLEKRKDRAAVRAPYQLHYSASSSKPAAHNGN
        LHRFLEKRKDR   +APYQL   A +S      GN
Subjt:  LHRFLEKRKDRAAVRAPYQLHYSASSSKPAAHNGN

AT1G19180.2 jasmonate-zim-domain protein 11.3e-1340Show/hide
Query:  LKERRSIARIEPKQQ--EMTIFYAGQVMVFDHLPSERAEEVMAMA----------------------ANAIP--------EPIKAS----GDLPIARRAS
        LK  ++   ++P+ Q   +TIFYAGQV+VF+   +E+A+EV+ +A                      AN +P        EPI++S     +LPIARRAS
Subjt:  LKERRSIARIEPKQQ--EMTIFYAGQVMVFDHLPSERAEEVMAMA----------------------ANAIP--------EPIKAS----GDLPIARRAS

Query:  LHRFLEKRKDRAAVRAPYQLHYSASSSKPAAHNGN
        LHRFLEKRKDR   +APYQL   A +S      GN
Subjt:  LHRFLEKRKDRAAVRAPYQLHYSASSSKPAAHNGN

AT1G72450.1 jasmonate-zim-domain protein 63.3e-0932.8Show/hide
Query:  ARIEPK--QQEMTIFYAGQVMVFDHLPSERAEEVMAMAANA-------------------------IPEPIKASGDLP------------IARRASLHRF
        A++ P+    ++TIF+ G+VMVF+  P ++A+E+M +A  A                         + EP  +  +              IARRASLHRF
Subjt:  ARIEPK--QQEMTIFYAGQVMVFDHLPSERAEEVMAMAANA-------------------------IPEPIKASGDLP------------IARRASLHRF

Query:  LEKRKDRAAVRAPYQLHYSASSSKP
          KRKDRA  RAPYQ++   S   P
Subjt:  LEKRKDRAAVRAPYQLHYSASSSKP

AT1G74950.1 TIFY domain/Divergent CCT motif family protein1.4e-1236.69Show/hide
Query:  QYLKERRSIARIEPKQQEMTIFYAGQVMVFDHLPSERAEEV------------------------------MAMAANAI-------------PEPIKASG
        Q +KE     + E +   +TIFY G+VMVFD   +E+A+EV                              +A + N +             P P   + 
Subjt:  QYLKERRSIARIEPKQQEMTIFYAGQVMVFDHLPSERAEEV------------------------------MAMAANAI-------------PEPIKASG

Query:  DLPIARRASLHRFLEKRKDRAAVRAPYQLHYSA-SSSKP
        +LPIARRASLHRFLEKRKDR   +APYQ+  SA +SSKP
Subjt:  DLPIARRASLHRFLEKRKDRAAVRAPYQLHYSA-SSSKP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCAGCTTTGCTCAGACTTGTAATCTGCTGAGGCAGTACTTGAAGGAGAGGAGAAGCATTGCAAGGATTGAACCAAAACAACAAGAGATGACCATTTTCTACGCCGG
ACAAGTGATGGTGTTCGACCATCTTCCCTCCGAGAGGGCGGAGGAGGTCATGGCCATGGCCGCAAACGCAATTCCCGAACCGATCAAGGCTTCCGGCGATTTGCCCATTG
CAAGAAGAGCTTCTCTGCATCGGTTCTTGGAGAAGAGAAAAGACAGAGCTGCAGTAAGAGCGCCATACCAACTGCATTACTCTGCTTCTTCATCTAAACCAGCCGCCCAC
AACGGAAACCAGCAATCATCAAACCAATTTGATCTCAATTTATAG
mRNA sequenceShow/hide mRNA sequence
GTAGGTGTTGTTTATATAGTTGAAAGTTTGGAGCATCAAAACAAATCTCAACACAAAAGTCCTTCACATCTCAAACACATTTTTGGTGCTCAATTTCAGCAGCATGTCCA
GCTTTGCTCAGACTTGTAATCTGCTGAGGCAGTACTTGAAGGAGAGGAGAAGCATTGCAAGGATTGAACCAAAACAACAAGAGATGACCATTTTCTACGCCGGACAAGTG
ATGGTGTTCGACCATCTTCCCTCCGAGAGGGCGGAGGAGGTCATGGCCATGGCCGCAAACGCAATTCCCGAACCGATCAAGGCTTCCGGCGATTTGCCCATTGCAAGAAG
AGCTTCTCTGCATCGGTTCTTGGAGAAGAGAAAAGACAGAGCTGCAGTAAGAGCGCCATACCAACTGCATTACTCTGCTTCTTCATCTAAACCAGCCGCCCACAACGGAA
ACCAGCAATCATCAAACCAATTTGATCTCAATTTATAGATAAATTACCATACATTATAAACATATGTTACTCCTTCTCTTACTTAACTCTAATATATATGTTGTTGGACC
AACAAGTTTCGACGCATATGTTTTTTTCCTTCCCATATTTAGATCATAGTCGTCAAACCAATTTCTGGCAGACTGCAAATTTAATATCTCTCGCCAACATGAGCAATTGC
TTAAGAGCTATTGTGTATGTCTAATGACGAGAGGTCTTAGGTTCGAGTCTCTCACCTCTAATGTTGTAATCTCAAAAAAAAAAAAAAAAAAAAAAAAATCTAATATCTCT
TGTCAGTTTTTTTTTTTAATCATAAGATCGAGTTCAAAAAAAAAAAAAAGTTACATCTTATGTATATTGAAACAAAATTTGTAAACTAAAAAAAATAACTTGTTTTCATT
TTCAAAATTTTGATAATCATCTTATTTTAG
Protein sequenceShow/hide protein sequence
MSSFAQTCNLLRQYLKERRSIARIEPKQQEMTIFYAGQVMVFDHLPSERAEEVMAMAANAIPEPIKASGDLPIARRASLHRFLEKRKDRAAVRAPYQLHYSASSSKPAAH
NGNQQSSNQFDLNL