; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0011505 (gene) of Chayote v1 genome

Gene IDSed0011505
OrganismSechium edule (Chayote v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationLG05:24810107..24811998
RNA-Seq ExpressionSed0011505
SyntenySed0011505
Gene Ontology termsGO:0009416 - response to light stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004148579.1 chlorophyll a-b binding protein of LHCII type 1-like [Cucumis sativus]1.8e-12290Show/hide
Query:  NINFNGRVSMRKSGKPASSSGSPWYGPDRVKYLGPFSGESPSYLKGEFPGDYGWDTAGLSADPET------------RWAMLGALGCVFPELLSRNGVKF
        ++  NGRV+MRKSGKPA+SSGSPWYGPDRVKYLGPFSGE PSYLKGEFPGDYGWDTAGLSADPET            RWAMLGALGCVFPELLSRNGVKF
Subjt:  NINFNGRVSMRKSGKPASSSGSPWYGPDRVKYLGPFSGESPSYLKGEFPGDYGWDTAGLSADPET------------RWAMLGALGCVFPELLSRNGVKF

Query:  GEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMSAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMF
        GEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWASQVVLM AVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDP+AF+ELKVKELKNGRLAMFSMF
Subjt:  GEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMSAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMF

Query:  GFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK
        GFFVQAIVTGKGPLENLADHLADPVNNNAW+YATNFVPGK
Subjt:  GFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK

XP_008447450.1 PREDICTED: chlorophyll a-b binding protein of LHCII type 1-like [Cucumis melo]1.8e-12290Show/hide
Query:  NINFNGRVSMRKSGKPASSSGSPWYGPDRVKYLGPFSGESPSYLKGEFPGDYGWDTAGLSADPET------------RWAMLGALGCVFPELLSRNGVKF
        ++  NGR+SMRKSGKPA+SSGSPWYGPDRVKYLGPFSGE PSYLKGEFPGDYGWDTAGLSADPET            RWAMLGALGCVFPELLSRNGV F
Subjt:  NINFNGRVSMRKSGKPASSSGSPWYGPDRVKYLGPFSGESPSYLKGEFPGDYGWDTAGLSADPET------------RWAMLGALGCVFPELLSRNGVKF

Query:  GEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMSAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMF
        GEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWASQVVLM AVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDP+AFAELKVKELKNGRLAMFSMF
Subjt:  GEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMSAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMF

Query:  GFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK
        GFFVQAIVTGKGPLENLADHLADPVNNNAW+YATNFVPGK
Subjt:  GFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK

XP_022948926.1 chlorophyll a-b binding protein of LHCII type 1-like [Cucurbita moschata]5.3e-12290.42Show/hide
Query:  NINFNGRVSMRKSGKPASSSGSPWYGPDRVKYLGPFSGESPSYLKGEFPGDYGWDTAGLSADPET------------RWAMLGALGCVFPELLSRNGVKF
        ++  NGRVSMRKSGKPASSSGSPWYGPDRVKYLGPFSGE PSYL GEFPGDYGWDTAGLSADPET            RWAMLGALGCVFPELLSRNGVKF
Subjt:  NINFNGRVSMRKSGKPASSSGSPWYGPDRVKYLGPFSGESPSYLKGEFPGDYGWDTAGLSADPET------------RWAMLGALGCVFPELLSRNGVKF

Query:  GEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMSAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMF
        GEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA QVVLM AVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDP+AFAELKVKELKNGRLAMFSMF
Subjt:  GEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMSAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMF

Query:  GFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK
        G+FVQAIVTGKGPLENLADHLADPVNNNAW+YATNFVPGK
Subjt:  GFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK

XP_022998479.1 chlorophyll a-b binding protein of LHCII type 1 [Cucurbita maxima]3.1e-12290.42Show/hide
Query:  NINFNGRVSMRKSGKPASSSGSPWYGPDRVKYLGPFSGESPSYLKGEFPGDYGWDTAGLSADPET------------RWAMLGALGCVFPELLSRNGVKF
        ++  NGRVSMRKSGKPASSSGSPWYGPDRVKYLGPFSGE PSYL GEFPGDYGWDTAGLSADPET            RWAMLGALGCVFPELLSRNGVKF
Subjt:  NINFNGRVSMRKSGKPASSSGSPWYGPDRVKYLGPFSGESPSYLKGEFPGDYGWDTAGLSADPET------------RWAMLGALGCVFPELLSRNGVKF

Query:  GEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMSAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMF
        GEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA Q+VLM AVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDP+AFAELKVKELKNGRLAMFSMF
Subjt:  GEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMSAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMF

Query:  GFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK
        GFFVQAIVTGKGPLENLADHLADPVNNNAW+YATNFVPGK
Subjt:  GFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK

XP_038903667.1 chlorophyll a-b binding protein of LHCII type 1-like [Benincasa hispida]5.3e-12289.58Show/hide
Query:  NINFNGRVSMRKSGKPASSSGSPWYGPDRVKYLGPFSGESPSYLKGEFPGDYGWDTAGLSADPET------------RWAMLGALGCVFPELLSRNGVKF
        ++  NGRVSMR+SGKPA+SSGSPWYGPDRVKYLGPFSGE PSYL GEFPGDYGWDTAGLSADPET            RWAMLGALGCVFPELLSRNGVKF
Subjt:  NINFNGRVSMRKSGKPASSSGSPWYGPDRVKYLGPFSGESPSYLKGEFPGDYGWDTAGLSADPET------------RWAMLGALGCVFPELLSRNGVKF

Query:  GEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMSAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMF
        GEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWASQVVLM AVEGYRIAGGPLGE+TDPIYPGGSFDPLGLADDP+AFAELKVKELKNGRLAMFSMF
Subjt:  GEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMSAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMF

Query:  GFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK
        GFFVQAIVTGKGPLENLADHLADPVNNNAW+YATNFVPGK
Subjt:  GFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK

TrEMBL top hitse value%identityAlignment
A0A0A0LCY3 Chlorophyll a-b binding protein, chloroplastic8.8e-12390Show/hide
Query:  NINFNGRVSMRKSGKPASSSGSPWYGPDRVKYLGPFSGESPSYLKGEFPGDYGWDTAGLSADPET------------RWAMLGALGCVFPELLSRNGVKF
        ++  NGRV+MRKSGKPA+SSGSPWYGPDRVKYLGPFSGE PSYLKGEFPGDYGWDTAGLSADPET            RWAMLGALGCVFPELLSRNGVKF
Subjt:  NINFNGRVSMRKSGKPASSSGSPWYGPDRVKYLGPFSGESPSYLKGEFPGDYGWDTAGLSADPET------------RWAMLGALGCVFPELLSRNGVKF

Query:  GEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMSAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMF
        GEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWASQVVLM AVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDP+AF+ELKVKELKNGRLAMFSMF
Subjt:  GEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMSAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMF

Query:  GFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK
        GFFVQAIVTGKGPLENLADHLADPVNNNAW+YATNFVPGK
Subjt:  GFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK

A0A1S3BHH5 Chlorophyll a-b binding protein, chloroplastic8.8e-12390Show/hide
Query:  NINFNGRVSMRKSGKPASSSGSPWYGPDRVKYLGPFSGESPSYLKGEFPGDYGWDTAGLSADPET------------RWAMLGALGCVFPELLSRNGVKF
        ++  NGR+SMRKSGKPA+SSGSPWYGPDRVKYLGPFSGE PSYLKGEFPGDYGWDTAGLSADPET            RWAMLGALGCVFPELLSRNGV F
Subjt:  NINFNGRVSMRKSGKPASSSGSPWYGPDRVKYLGPFSGESPSYLKGEFPGDYGWDTAGLSADPET------------RWAMLGALGCVFPELLSRNGVKF

Query:  GEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMSAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMF
        GEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWASQVVLM AVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDP+AFAELKVKELKNGRLAMFSMF
Subjt:  GEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMSAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMF

Query:  GFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK
        GFFVQAIVTGKGPLENLADHLADPVNNNAW+YATNFVPGK
Subjt:  GFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK

A0A5D3DAB9 Chlorophyll a-b binding protein, chloroplastic8.8e-12390Show/hide
Query:  NINFNGRVSMRKSGKPASSSGSPWYGPDRVKYLGPFSGESPSYLKGEFPGDYGWDTAGLSADPET------------RWAMLGALGCVFPELLSRNGVKF
        ++  NGR+SMRKSGKPA+SSGSPWYGPDRVKYLGPFSGE PSYLKGEFPGDYGWDTAGLSADPET            RWAMLGALGCVFPELLSRNGV F
Subjt:  NINFNGRVSMRKSGKPASSSGSPWYGPDRVKYLGPFSGESPSYLKGEFPGDYGWDTAGLSADPET------------RWAMLGALGCVFPELLSRNGVKF

Query:  GEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMSAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMF
        GEAVWFKAGSQIFSEGGLDYLGNPSL+HAQSILAIWASQVVLM AVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDP+AFAELKVKELKNGRLAMFSMF
Subjt:  GEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMSAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMF

Query:  GFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK
        GFFVQAIVTGKGPLENLADHLADPVNNNAW+YATNFVPGK
Subjt:  GFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK

A0A6J1GAK0 Chlorophyll a-b binding protein, chloroplastic2.6e-12290.42Show/hide
Query:  NINFNGRVSMRKSGKPASSSGSPWYGPDRVKYLGPFSGESPSYLKGEFPGDYGWDTAGLSADPET------------RWAMLGALGCVFPELLSRNGVKF
        ++  NGRVSMRKSGKPASSSGSPWYGPDRVKYLGPFSGE PSYL GEFPGDYGWDTAGLSADPET            RWAMLGALGCVFPELLSRNGVKF
Subjt:  NINFNGRVSMRKSGKPASSSGSPWYGPDRVKYLGPFSGESPSYLKGEFPGDYGWDTAGLSADPET------------RWAMLGALGCVFPELLSRNGVKF

Query:  GEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMSAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMF
        GEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA QVVLM AVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDP+AFAELKVKELKNGRLAMFSMF
Subjt:  GEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMSAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMF

Query:  GFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK
        G+FVQAIVTGKGPLENLADHLADPVNNNAW+YATNFVPGK
Subjt:  GFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK

A0A6J1KEF6 Chlorophyll a-b binding protein, chloroplastic1.5e-12290.42Show/hide
Query:  NINFNGRVSMRKSGKPASSSGSPWYGPDRVKYLGPFSGESPSYLKGEFPGDYGWDTAGLSADPET------------RWAMLGALGCVFPELLSRNGVKF
        ++  NGRVSMRKSGKPASSSGSPWYGPDRVKYLGPFSGE PSYL GEFPGDYGWDTAGLSADPET            RWAMLGALGCVFPELLSRNGVKF
Subjt:  NINFNGRVSMRKSGKPASSSGSPWYGPDRVKYLGPFSGESPSYLKGEFPGDYGWDTAGLSADPET------------RWAMLGALGCVFPELLSRNGVKF

Query:  GEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMSAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMF
        GEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA Q+VLM AVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDP+AFAELKVKELKNGRLAMFSMF
Subjt:  GEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMSAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMF

Query:  GFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK
        GFFVQAIVTGKGPLENLADHLADPVNNNAW+YATNFVPGK
Subjt:  GFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK

SwissProt top hitse value%identityAlignment
P07369 Chlorophyll a-b binding protein 3C, chloroplastic5.7e-11986.31Show/hide
Query:  INFNGRVSMRKSGKPA--SSSGSPWYGPDRVKYLGPFSGESPSYLKGEFPGDYGWDTAGLSADPET------------RWAMLGALGCVFPELLSRNGVK
        I  NGRV+MRK+   A  +SSGSPWYGPDRVKYLGPFSGESPSYL GEFPGDYGWDTAGLSADPET            RWAMLGALGCVFPELL+RNGVK
Subjt:  INFNGRVSMRKSGKPA--SSSGSPWYGPDRVKYLGPFSGESPSYLKGEFPGDYGWDTAGLSADPET------------RWAMLGALGCVFPELLSRNGVK

Query:  FGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMSAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSM
        FGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA QVVLM AVEGYRIAGGPLGE+ DP+YPGGSFDPLGLADDP+AFAELKVKE+KNGRLAMFSM
Subjt:  FGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMSAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSM

Query:  FGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK
        FGFFVQAIVTGKGPLENLADHLADPVNNNAW++ATNFVPGK
Subjt:  FGFFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK

P07371 Chlorophyll a-b binding protein AB80, chloroplastic5.7e-11988.14Show/hide
Query:  RVSMRKSG--KPASSSGSPWYGPDRVKYLGPFSGESPSYLKGEFPGDYGWDTAGLSADPET------------RWAMLGALGCVFPELLSRNGVKFGEAV
        R +MRKS   K  +SSGSPWYGPDRVKYLGPFSGESPSYL GEFPGDYGWDTAGLSADPET            RWAMLGALGCVFPELLSRNGVKFGEAV
Subjt:  RVSMRKSG--KPASSSGSPWYGPDRVKYLGPFSGESPSYLKGEFPGDYGWDTAGLSADPET------------RWAMLGALGCVFPELLSRNGVKFGEAV

Query:  WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMSAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFV
        WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA+QV+LM AVEGYRIAGGPLGE+ DP+YPGGSFDPLGLADDP+AFAELKVKELKNGRLAMFSMFGFFV
Subjt:  WFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMSAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFV

Query:  QAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK
        QAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK
Subjt:  QAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK

P08221 Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment)1.5e-11987.03Show/hide
Query:  INFNGRVSMRKSGKPASSSGSPWYGPDRVKYLGPFSGESPSYLKGEFPGDYGWDTAGLSADPET------------RWAMLGALGCVFPELLSRNGVKFG
        I  N + +MRK+   + SSGSPWYGPDRVKYLGPFSGE PSYL GEFPGDYGWDTAGLSADPET            RWAMLGALGCVFPELLSRNGVKFG
Subjt:  INFNGRVSMRKSGKPASSSGSPWYGPDRVKYLGPFSGESPSYLKGEFPGDYGWDTAGLSADPET------------RWAMLGALGCVFPELLSRNGVKFG

Query:  EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMSAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFG
        EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA QVVLM AVEGYRIAGGPLGE+TDPIYPGGSFDPLGLADDP+AFAELKVKELKNGRLAMFSMFG
Subjt:  EAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMSAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFG

Query:  FFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK
        FFVQAIVTGKGPLENLADHLADPVNNNAW+YATNFVPGK
Subjt:  FFVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK

P09756 Chlorophyll a-b binding protein 3, chloroplastic4.4e-11988.09Show/hide
Query:  GRVSMRKSGKPASSSGSPWYGPDRVKYLGPFSGESPSYLKGEFPGDYGWDTAGLSADPET------------RWAMLGALGCVFPELLSRNGVKFGEAVW
        GRVSMRK+     SSGSPWYGPDRVKYLGPFSGE PSYL GEFPGDYGWDTAGLSADPET            RWAMLGALGCVFPELLSRNGVKFGEAVW
Subjt:  GRVSMRKSGKPASSSGSPWYGPDRVKYLGPFSGESPSYLKGEFPGDYGWDTAGLSADPET------------RWAMLGALGCVFPELLSRNGVKFGEAVW

Query:  FKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMSAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQ
        FKAGSQIFSEGGLDYLGNPSL+HAQSILAIWA+QV+LM AVEGYRIAGGPLGE+TDPIYPGGSFDPLGLADDP+AFAELKVKELKNGRLAMFSMFGFFVQ
Subjt:  FKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMSAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQ

Query:  AIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK
        AIVTGKGPLENLADHLA PVNNNAW+YATNFVPGK
Subjt:  AIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK

P27492 Chlorophyll a-b binding protein 16, chloroplastic1.3e-11886.55Show/hide
Query:  NGRVSMRKSGKPAS--SSGSPWYGPDRVKYLGPFSGESPSYLKGEFPGDYGWDTAGLSADPET------------RWAMLGALGCVFPELLSRNGVKFGE
        NG+V+MRK+   A   SSGSPWYGPDRVKYLGPFSGESPSYL GEFPGDYGWDTAGLSADPET            RWAMLGALGCVFPELL+RNGVKFGE
Subjt:  NGRVSMRKSGKPAS--SSGSPWYGPDRVKYLGPFSGESPSYLKGEFPGDYGWDTAGLSADPET------------RWAMLGALGCVFPELLSRNGVKFGE

Query:  AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMSAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGF
        AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWA QVVLM AVEGYR+AGGPLGE+ DP+YPGGSFDPLGLA+DP+AFAELKVKE+KNGRLAMFSMFGF
Subjt:  AVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMSAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGF

Query:  FVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK
        FVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK
Subjt:  FVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK

Arabidopsis top hitse value%identityAlignment
AT1G29910.1 chlorophyll A/B binding protein 31.5e-11484.03Show/hide
Query:  NGRVSMRKS-GKPASSSGSPWYGPDRVKYLGPFSGESPSYLKGEFPGDYGWDTAGLSADPET------------RWAMLGALGCVFPELLSRNGVKFGEA
        +GRV+MRK+  KP   SGSPWYG DRVKYLGPFSGESPSYL GEFPGDYGWDTAGLSADPET            RWAMLGALGCVFPELL+RNGVKFGEA
Subjt:  NGRVSMRKS-GKPASSSGSPWYGPDRVKYLGPFSGESPSYLKGEFPGDYGWDTAGLSADPET------------RWAMLGALGCVFPELLSRNGVKFGEA

Query:  VWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMSAVEGYRIAG-GPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGF
        VWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWA+QV+LM AVEGYR+AG GPLGE  D +YPGGSFDPLGLA DP+AFAELKVKELKNGRLAMFSMFGF
Subjt:  VWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMSAVEGYRIAG-GPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGF

Query:  FVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK
        FVQAIVTGKGP+ENLADHLADPVNNNAW++ATNFVPGK
Subjt:  FVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK

AT1G29920.1 chlorophyll A/B-binding protein 21.5e-11484.03Show/hide
Query:  NGRVSMRKS-GKPASSSGSPWYGPDRVKYLGPFSGESPSYLKGEFPGDYGWDTAGLSADPET------------RWAMLGALGCVFPELLSRNGVKFGEA
        +GRV+MRK+  KP   SGSPWYG DRVKYLGPFSGESPSYL GEFPGDYGWDTAGLSADPET            RWAMLGALGCVFPELL+RNGVKFGEA
Subjt:  NGRVSMRKS-GKPASSSGSPWYGPDRVKYLGPFSGESPSYLKGEFPGDYGWDTAGLSADPET------------RWAMLGALGCVFPELLSRNGVKFGEA

Query:  VWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMSAVEGYRIAG-GPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGF
        VWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWA+QV+LM AVEGYR+AG GPLGE  D +YPGGSFDPLGLA DP+AFAELKVKELKNGRLAMFSMFGF
Subjt:  VWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMSAVEGYRIAG-GPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGF

Query:  FVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK
        FVQAIVTGKGP+ENLADHLADPVNNNAW++ATNFVPGK
Subjt:  FVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK

AT1G29930.1 chlorophyll A/B binding protein 11.5e-11484.03Show/hide
Query:  NGRVSMRKS-GKPASSSGSPWYGPDRVKYLGPFSGESPSYLKGEFPGDYGWDTAGLSADPET------------RWAMLGALGCVFPELLSRNGVKFGEA
        +GRV+MRK+  KP   SGSPWYG DRVKYLGPFSGESPSYL GEFPGDYGWDTAGLSADPET            RWAMLGALGCVFPELL+RNGVKFGEA
Subjt:  NGRVSMRKS-GKPASSSGSPWYGPDRVKYLGPFSGESPSYLKGEFPGDYGWDTAGLSADPET------------RWAMLGALGCVFPELLSRNGVKFGEA

Query:  VWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMSAVEGYRIAG-GPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGF
        VWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWA+QV+LM AVEGYR+AG GPLGE  D +YPGGSFDPLGLA DP+AFAELKVKELKNGRLAMFSMFGF
Subjt:  VWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMSAVEGYRIAG-GPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGF

Query:  FVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK
        FVQAIVTGKGP+ENLADHLADPVNNNAW++ATNFVPGK
Subjt:  FVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK

AT2G34420.1 photosystem II light harvesting complex gene B1B23.3e-11484.03Show/hide
Query:  NGRVSMRKS-GKPASSSGSPWYGPDRVKYLGPFSGESPSYLKGEFPGDYGWDTAGLSADPET------------RWAMLGALGCVFPELLSRNGVKFGEA
        +GRV+MRK+  KP   SGSPWYG DRVKYLGPFSGE PSYL GEFPGDYGWDTAGLSADPET            RWAMLGALGCVFPELL+RNGVKFGEA
Subjt:  NGRVSMRKS-GKPASSSGSPWYGPDRVKYLGPFSGESPSYLKGEFPGDYGWDTAGLSADPET------------RWAMLGALGCVFPELLSRNGVKFGEA

Query:  VWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMSAVEGYRIAG-GPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGF
        VWFKAGSQIFS+GGLDYLGNPSLVHAQSILAIWA+QV+LM AVEGYR+AG GPLGE  D +YPGGSFDPLGLA DP+AFAELKVKELKNGRLAMFSMFGF
Subjt:  VWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMSAVEGYRIAG-GPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGF

Query:  FVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK
        FVQAIVTGKGPLENLADHLADPVNNNAW++ATNFVPGK
Subjt:  FVQAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK

AT2G34430.1 light-harvesting chlorophyll-protein complex II subunit B11.8e-11584.32Show/hide
Query:  GRVSMRKSGKPASSSGSPWYGPDRVKYLGPFSGESPSYLKGEFPGDYGWDTAGLSADPET------------RWAMLGALGCVFPELLSRNGVKFGEAVW
        GR++MRK+ KP   SGSPWYG DRVKYLGPFSGE PSYL GEFPGDYGWDTAGLSADPET            RWAMLGALGCVFPELL+RNGVKFGEAVW
Subjt:  GRVSMRKSGKPASSSGSPWYGPDRVKYLGPFSGESPSYLKGEFPGDYGWDTAGLSADPET------------RWAMLGALGCVFPELLSRNGVKFGEAVW

Query:  FKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMSAVEGYRIAG-GPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFV
        FKAGSQIFS+GGLDYLGNPSLVHAQSILAIWA+QV+LM AVEGYR+AG GPLGE  D +YPGGSFDPLGLA DP+AFAELKVKELKNGRLAMFSMFGFFV
Subjt:  FKAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMSAVEGYRIAG-GPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFV

Query:  QAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK
        QAIVTGKGPLENLADHLADPVNNNAW++ATNFVPGK
Subjt:  QAIVTGKGPLENLADHLADPVNNNAWSYATNFVPGK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGAATGGAAGGGATTTTGGATAAGTTGGAGAAAAACAAGAAAAAACATTAATTTCAATGGGAGAGTGTCGATGAGGAAATCCGGAAAGCCAGCATCTTCCTCAGG
CAGCCCATGGTATGGCCCTGACCGTGTTAAGTACCTTGGACCATTCTCTGGCGAGTCTCCATCTTACCTCAAAGGAGAATTCCCTGGTGATTATGGTTGGGACACTGCAG
GCTTATCCGCCGACCCCGAGACTAGATGGGCCATGCTTGGTGCTCTAGGATGTGTGTTCCCAGAGCTTCTTTCCAGGAATGGAGTCAAGTTTGGTGAAGCAGTTTGGTTT
AAGGCTGGTTCACAAATCTTCAGTGAGGGTGGGCTTGACTATCTTGGAAACCCAAGTCTTGTTCATGCACAAAGCATTTTGGCCATTTGGGCATCCCAAGTTGTGCTTAT
GAGTGCAGTTGAAGGTTATCGTATTGCGGGAGGTCCTCTCGGAGAAATTACCGATCCCATATACCCAGGTGGAAGCTTTGATCCCCTCGGGTTGGCTGATGATCCAGACG
CATTTGCAGAGCTTAAGGTGAAAGAACTTAAGAATGGCCGTCTTGCTATGTTTTCTATGTTTGGATTCTTCGTGCAGGCGATTGTAACAGGAAAAGGTCCTTTGGAGAAC
CTTGCTGATCATCTTGCTGATCCTGTCAACAACAATGCTTGGTCTTATGCTACCAACTTTGTACCTGGGAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGGAATGGAAGGGATTTTGGATAAGTTGGAGAAAAACAAGAAAAAACATTAATTTCAATGGGAGAGTGTCGATGAGGAAATCCGGAAAGCCAGCATCTTCCTCAGG
CAGCCCATGGTATGGCCCTGACCGTGTTAAGTACCTTGGACCATTCTCTGGCGAGTCTCCATCTTACCTCAAAGGAGAATTCCCTGGTGATTATGGTTGGGACACTGCAG
GCTTATCCGCCGACCCCGAGACTAGATGGGCCATGCTTGGTGCTCTAGGATGTGTGTTCCCAGAGCTTCTTTCCAGGAATGGAGTCAAGTTTGGTGAAGCAGTTTGGTTT
AAGGCTGGTTCACAAATCTTCAGTGAGGGTGGGCTTGACTATCTTGGAAACCCAAGTCTTGTTCATGCACAAAGCATTTTGGCCATTTGGGCATCCCAAGTTGTGCTTAT
GAGTGCAGTTGAAGGTTATCGTATTGCGGGAGGTCCTCTCGGAGAAATTACCGATCCCATATACCCAGGTGGAAGCTTTGATCCCCTCGGGTTGGCTGATGATCCAGACG
CATTTGCAGAGCTTAAGGTGAAAGAACTTAAGAATGGCCGTCTTGCTATGTTTTCTATGTTTGGATTCTTCGTGCAGGCGATTGTAACAGGAAAAGGTCCTTTGGAGAAC
CTTGCTGATCATCTTGCTGATCCTGTCAACAACAATGCTTGGTCTTATGCTACCAACTTTGTACCTGGGAAGTGAAAATATGAAGTTATGTTTGAACAAGCTTTCAATTC
ATTCCATTGAGCGCATAGCGTGTAAAGTGTAGTATCAAAATGTTGAATATCAACAATGGCTGTTAAAATCAATGAAACTGTTCCTAAGCAAGTAGTTGCTTTATTGATCC
TTTAAAAATGGAAAAAGCTATAAGTCCAACTTCAATAAGTTGAAATGAAATGCCATAATTCTTCAAGAACTTGGCAAATATAACAAAAAGGATAAAAATGAT
Protein sequenceShow/hide protein sequence
MVEWKGFWISWRKTRKNINFNGRVSMRKSGKPASSSGSPWYGPDRVKYLGPFSGESPSYLKGEFPGDYGWDTAGLSADPETRWAMLGALGCVFPELLSRNGVKFGEAVWF
KAGSQIFSEGGLDYLGNPSLVHAQSILAIWASQVVLMSAVEGYRIAGGPLGEITDPIYPGGSFDPLGLADDPDAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLEN
LADHLADPVNNNAWSYATNFVPGK