CuGenDBv2

Gene ID	Sed0011511
Organism	Sechium edule (Chayote v1)
Description	Nucleolin 1
Genome location	LG06:445000..447120
RNA-Seq Expression	Sed0011511
Synteny	Sed0011511
Gene Ontology terms	GO:0005515 - protein binding (molecular function)
InterPro domains	IPR008984 - SMAD/FHA domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0036698.1 nucleolin 1 [Cucumis melo var. makuwa]

1.9e-116

76.87

Show/hide

Query:  MEITGDDGSKLILRESVTIIGRGSGFASKDRTISRRHLLIEAKTSENSDGAFTEPRVSFEVFGCNPIWVRSAKNGEIRAFRRSEKGEMAPGESFCVGGQE
        MEI G+DGSKLILRE VTI GRGSGFASKDRTISRRH+LIEAKTS+N++GA  EP+VSFEV G NPIWVRS+KNGEIR FRRSEKG+MAPGESFCVGGQE
Subjt:  MEITGDDGSKLILRESVTIIGRGSGFASKDRTISRRHLLIEAKTSENSDGAFTEPRVSFEVFGCNPIWVRSAKNGEIRAFRRSEKGEMAPGESFCVGGQE

Query:  PIWFELNEMAEFEEGEQIGEEFENDFATRSSDLEDIDVSGIDPLKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEGRKDS-DDDEDYGRKKKRGVRGKR
        PIWFELN++ EFEEG+ +        ++RSSD +DIDVSGIDP+KEFGFLVMGHEFECYGNRVIRD KKWDWFLD   KDS DDDEDY RKKKRGVRGKR
Subjt:  PIWFELNEMAEFEEGEQIGEEFENDFATRSSDLEDIDVSGIDPLKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEGRKDS-DDDEDYGRKKKRGVRGKR

Query:  KKGTNSEDEDWTDENEDDVEMIAKTKKFQRPKYSTRSKDRHKIQQDQKKAAKSNNDSDEEDEDEDEDEDEETLGGFIVTDEVDTEEQMDQDDEEEEELLD
        KKG NS+DEDWTDENED V+MI K +K QRPKYSTRSKDR+KI  DQ+KAAKSN D D E E   EDED+ETLGGFIV DEVD  EQMD+D  EEEE LD
Subjt:  KKGTNSEDEDWTDENEDDVEMIAKTKKFQRPKYSTRSKDRHKIQQDQKKAAKSNNDSDEEDEDEDEDEDEETLGGFIVTDEVDTEEQMDQDDEEEEELLD

Query:  DDEEEED
        D+++EED
Subjt:  DDEEEED

XP_004146848.1 nucleolin 1 [Cucumis sativus]

1.3e-117

77.85

Show/hide

Query:  MEITGDDGSKLILRESVTIIGRGSGFASKDRTISRRHLLIEAKTSENSDGAFTEPRVSFEVFGCNPIWVRSAKNGEIRAFRRSEKGEMAPGESFCVGGQE
        MEITG+DGSKL+LRE VT+ GRGSGFASKDRTISRRH+LIEAKTSEN++GA  EP+VSFEV G NPIWVRS+KNGEIR F+RSEKGEMAPGESFCVGGQE
Subjt:  MEITGDDGSKLILRESVTIIGRGSGFASKDRTISRRHLLIEAKTSENSDGAFTEPRVSFEVFGCNPIWVRSAKNGEIRAFRRSEKGEMAPGESFCVGGQE

Query:  PIWFELNEMAEFEEGEQIGEEFENDFATRSSDLEDIDVSGIDPLKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEGRKDSDDD-EDYGRKKKRGVRGKR
        PIWFELN++AEFEEG+Q+         +RSSD +DIDVSGIDP+KEFGFLVMGHEFECYGNRVIRD KKWDWFLD   KDSDDD EDY RKKKRGV GKR
Subjt:  PIWFELNEMAEFEEGEQIGEEFENDFATRSSDLEDIDVSGIDPLKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEGRKDSDDD-EDYGRKKKRGVRGKR

Query:  KKGTNSEDEDWTDENEDDVEMIAKTKKFQRPKYSTRSKDRHKIQQDQKKAAKSNNDSDEEDEDEDEDEDEETLGGFIVTDEVDTEEQMDQDDEEEEELLD
        KKGTNS+DEDWTDENED VEMI K +K QRPKYSTRSKDR+KI  DQ+KAAKSN + + E E   EDED+ETLGGFIV DEVD  EQMD +DEEEEE LD
Subjt:  KKGTNSEDEDWTDENEDDVEMIAKTKKFQRPKYSTRSKDRHKIQQDQKKAAKSNNDSDEEDEDEDEDEDEETLGGFIVTDEVDTEEQMDQDDEEEEELLD

Query:  DDEEEED
        D+E+EED
Subjt:  DDEEEED

XP_008447630.1 PREDICTED: nucleolin 1 [Cucumis melo]

2.5e-116

76.55

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Query:  MEITGDDGSKLILRESVTIIGRGSGFASKDRTISRRHLLIEAKTSENSDGAFTEPRVSFEVFGCNPIWVRSAKNGEIRAFRRSEKGEMAPGESFCVGGQE
        MEI G+DGSKL+LRE VTI GRGSGFASKDRTISRRH+LIEAKTS+N++GA  EP+VSFEV G NPIWVRS+KNGEIR FRRSEKG+MAPGESFCVGGQE
Subjt:  MEITGDDGSKLILRESVTIIGRGSGFASKDRTISRRHLLIEAKTSENSDGAFTEPRVSFEVFGCNPIWVRSAKNGEIRAFRRSEKGEMAPGESFCVGGQE

Query:  PIWFELNEMAEFEEGEQIGEEFENDFATRSSDLEDIDVSGIDPLKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEGRKDS-DDDEDYGRKKKRGVRGKR
        PIWFELN++ EFEEG+ +        ++RSSD +DIDVSGIDP+KEFGFLVMGHEFECYGNRVIRD KKWDWFLD   KDS DDDEDY RKKKRGVRGKR
Subjt:  PIWFELNEMAEFEEGEQIGEEFENDFATRSSDLEDIDVSGIDPLKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEGRKDS-DDDEDYGRKKKRGVRGKR

Query:  KKGTNSEDEDWTDENEDDVEMIAKTKKFQRPKYSTRSKDRHKIQQDQKKAAKSNNDSDEEDEDEDEDEDEETLGGFIVTDEVDTEEQMDQDDEEEEELLD
        KKG NS+DEDWTDENED V+MI K +K QRPKYSTRSKDR+KI  DQ+KAAKSN D D E E   EDED+ETLGGFIV DEVD  EQMD+D  EEEE LD
Subjt:  KKGTNSEDEDWTDENEDDVEMIAKTKKFQRPKYSTRSKDRHKIQQDQKKAAKSNNDSDEEDEDEDEDEDEETLGGFIVTDEVDTEEQMDQDDEEEEELLD

Query:  DDEEEED
        D+++EED
Subjt:  DDEEEED

XP_022152655.1 protein bfr2 [Momordica charantia]

8.2e-120

77.35

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Query:  MEITGDDGSKLILRESVTIIGRGSGFASKDRTISRRHLLIEAKTSENSDGAFTEPRVSFEVFGCNPIWVRSAKNGEIRAFRRSEKGEMAPGESFCVGGQE
        MEI G+DGSKL++ E VTI GRGSGFASKDRT+SRRHLLIEAKTSEN DGA  EP +SFEV G NPIWVRS KNGEIR FRRSEKGE+APGESFCVGGQE
Subjt:  MEITGDDGSKLILRESVTIIGRGSGFASKDRTISRRHLLIEAKTSENSDGAFTEPRVSFEVFGCNPIWVRSAKNGEIRAFRRSEKGEMAPGESFCVGGQE

Query:  PIWFELNEMAEFEEGEQIGEEFENDFA---TRSSDLEDIDVSGIDPLKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEGRKDSDDDEDYGRKKKRGVRG
        P WF+LN++AE EEG++I  + E+ FA   TRSSD EDIDVSGIDP+KEFGFLVMGHEFECYGNRVIRDAKKWDWFLDE RK SDDDEDYGR+K+RGVRG
Subjt:  PIWFELNEMAEFEEGEQIGEEFENDFA---TRSSDLEDIDVSGIDPLKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEGRKDSDDDEDYGRKKKRGVRG

Query:  KRKKGTNSEDEDWTDENEDDVEMIAKTKKFQRPKYSTRSKDRHKIQQDQKKAAKSNNDSDEEDEDEDEDEDEETLGGFIVTDEVDTEEQMDQDDEEEEEL
        KRKKG NS+DEDWTDENED VEMIAK KK QRPKYSTRSKD +K  +DQ KAA SN D DE      EDED+ETLGGFIV DEVD EEQMD+D  EEEE 
Subjt:  KRKKGTNSEDEDWTDENEDDVEMIAKTKKFQRPKYSTRSKDRHKIQQDQKKAAKSNNDSDEEDEDEDEDEDEETLGGFIVTDEVDTEEQMDQDDEEEEEL

Query:  LDDDEEEED
         DDD+E+ED
Subjt:  LDDDEEEED

XP_038898830.1 protein PIF [Benincasa hispida]

2.8e-120

78.83

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Query:  MEITGDDGSKLILRESVTIIGRGSGFASKDRTISRRHLLIEAKTSENSDGAFTEPRVSFEVFGCNPIWVRSAKNGEIRAFRRSEKGEMAPGESFCVGGQE
        MEI G+DGSKL+LRE VTI GRGSGFASKDRT+SRRH+LIEAKTSENS+GA  EP VSFEV G NPIWVRS+KNGEIR FRRSEKGEMA GESFCVG QE
Subjt:  MEITGDDGSKLILRESVTIIGRGSGFASKDRTISRRHLLIEAKTSENSDGAFTEPRVSFEVFGCNPIWVRSAKNGEIRAFRRSEKGEMAPGESFCVGGQE

Query:  PIWFELNEMAEFEEGEQIGEEFENDFATRSSDLEDIDVSGIDPLKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEGRKDSDDDEDYGRKKKRGVRGKRK
        PIWFELN++AEFEE +Q        F +RSSD  DIDVSGIDP+KEFGFL MGHEFECYGNRVIRD KKWDWFLDE RKDSDDDEDYGRKKKRGV+GKRK
Subjt:  PIWFELNEMAEFEEGEQIGEEFENDFATRSSDLEDIDVSGIDPLKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEGRKDSDDDEDYGRKKKRGVRGKRK

Query:  KGTNSEDEDWTDENEDDVEMIAKTKKFQRPKYSTRSKDRHKIQQDQKKAAKSNNDSDEEDEDEDEDEDEETLGGFIVTDEVDTEEQMDQD---DEEEEEL
        KG NS+DEDWTDENED VEMI KTKKF+RPKYSTRSKDRHK   DQKKAA+SN D DEE E   EDED+ETLGGFIV DE D  EQMD+D   DEEEEE 
Subjt:  KGTNSEDEDWTDENEDDVEMIAKTKKFQRPKYSTRSKDRHKIQQDQKKAAKSNNDSDEEDEDEDEDEDEETLGGFIVTDEVDTEEQMDQD---DEEEEEL

Query:  LDDDEEE
         DDDEE+
Subjt:  LDDDEEE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LFR7 Uncharacterized protein

6.3e-118

77.85

Show/hide

Query:  MEITGDDGSKLILRESVTIIGRGSGFASKDRTISRRHLLIEAKTSENSDGAFTEPRVSFEVFGCNPIWVRSAKNGEIRAFRRSEKGEMAPGESFCVGGQE
        MEITG+DGSKL+LRE VT+ GRGSGFASKDRTISRRH+LIEAKTSEN++GA  EP+VSFEV G NPIWVRS+KNGEIR F+RSEKGEMAPGESFCVGGQE
Subjt:  MEITGDDGSKLILRESVTIIGRGSGFASKDRTISRRHLLIEAKTSENSDGAFTEPRVSFEVFGCNPIWVRSAKNGEIRAFRRSEKGEMAPGESFCVGGQE

Query:  PIWFELNEMAEFEEGEQIGEEFENDFATRSSDLEDIDVSGIDPLKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEGRKDSDDD-EDYGRKKKRGVRGKR
        PIWFELN++AEFEEG+Q+         +RSSD +DIDVSGIDP+KEFGFLVMGHEFECYGNRVIRD KKWDWFLD   KDSDDD EDY RKKKRGV GKR
Subjt:  PIWFELNEMAEFEEGEQIGEEFENDFATRSSDLEDIDVSGIDPLKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEGRKDSDDD-EDYGRKKKRGVRGKR

Query:  KKGTNSEDEDWTDENEDDVEMIAKTKKFQRPKYSTRSKDRHKIQQDQKKAAKSNNDSDEEDEDEDEDEDEETLGGFIVTDEVDTEEQMDQDDEEEEELLD
        KKGTNS+DEDWTDENED VEMI K +K QRPKYSTRSKDR+KI  DQ+KAAKSN + + E E   EDED+ETLGGFIV DEVD  EQMD +DEEEEE LD
Subjt:  KKGTNSEDEDWTDENEDDVEMIAKTKKFQRPKYSTRSKDRHKIQQDQKKAAKSNNDSDEEDEDEDEDEDEETLGGFIVTDEVDTEEQMDQDDEEEEELLD

Query:  DDEEEED
        D+E+EED
Subjt:  DDEEEED

A0A1S3BHB4 nucleolin 1

1.2e-116

76.55

Show/hide

Query:  MEITGDDGSKLILRESVTIIGRGSGFASKDRTISRRHLLIEAKTSENSDGAFTEPRVSFEVFGCNPIWVRSAKNGEIRAFRRSEKGEMAPGESFCVGGQE
        MEI G+DGSKL+LRE VTI GRGSGFASKDRTISRRH+LIEAKTS+N++GA  EP+VSFEV G NPIWVRS+KNGEIR FRRSEKG+MAPGESFCVGGQE
Subjt:  MEITGDDGSKLILRESVTIIGRGSGFASKDRTISRRHLLIEAKTSENSDGAFTEPRVSFEVFGCNPIWVRSAKNGEIRAFRRSEKGEMAPGESFCVGGQE

Query:  PIWFELNEMAEFEEGEQIGEEFENDFATRSSDLEDIDVSGIDPLKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEGRKDS-DDDEDYGRKKKRGVRGKR
        PIWFELN++ EFEEG+ +        ++RSSD +DIDVSGIDP+KEFGFLVMGHEFECYGNRVIRD KKWDWFLD   KDS DDDEDY RKKKRGVRGKR
Subjt:  PIWFELNEMAEFEEGEQIGEEFENDFATRSSDLEDIDVSGIDPLKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEGRKDS-DDDEDYGRKKKRGVRGKR

Query:  KKGTNSEDEDWTDENEDDVEMIAKTKKFQRPKYSTRSKDRHKIQQDQKKAAKSNNDSDEEDEDEDEDEDEETLGGFIVTDEVDTEEQMDQDDEEEEELLD
        KKG NS+DEDWTDENED V+MI K +K QRPKYSTRSKDR+KI  DQ+KAAKSN D D E E   EDED+ETLGGFIV DEVD  EQMD+D  EEEE LD
Subjt:  KKGTNSEDEDWTDENEDDVEMIAKTKKFQRPKYSTRSKDRHKIQQDQKKAAKSNNDSDEEDEDEDEDEDEETLGGFIVTDEVDTEEQMDQDDEEEEELLD

Query:  DDEEEED
        D+++EED
Subjt:  DDEEEED

A0A5A7T1L8 Nucleolin 1

9.1e-117

76.87

Show/hide

Query:  MEITGDDGSKLILRESVTIIGRGSGFASKDRTISRRHLLIEAKTSENSDGAFTEPRVSFEVFGCNPIWVRSAKNGEIRAFRRSEKGEMAPGESFCVGGQE
        MEI G+DGSKLILRE VTI GRGSGFASKDRTISRRH+LIEAKTS+N++GA  EP+VSFEV G NPIWVRS+KNGEIR FRRSEKG+MAPGESFCVGGQE
Subjt:  MEITGDDGSKLILRESVTIIGRGSGFASKDRTISRRHLLIEAKTSENSDGAFTEPRVSFEVFGCNPIWVRSAKNGEIRAFRRSEKGEMAPGESFCVGGQE

Query:  PIWFELNEMAEFEEGEQIGEEFENDFATRSSDLEDIDVSGIDPLKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEGRKDS-DDDEDYGRKKKRGVRGKR
        PIWFELN++ EFEEG+ +        ++RSSD +DIDVSGIDP+KEFGFLVMGHEFECYGNRVIRD KKWDWFLD   KDS DDDEDY RKKKRGVRGKR
Subjt:  PIWFELNEMAEFEEGEQIGEEFENDFATRSSDLEDIDVSGIDPLKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEGRKDS-DDDEDYGRKKKRGVRGKR

Query:  KKGTNSEDEDWTDENEDDVEMIAKTKKFQRPKYSTRSKDRHKIQQDQKKAAKSNNDSDEEDEDEDEDEDEETLGGFIVTDEVDTEEQMDQDDEEEEELLD
        KKG NS+DEDWTDENED V+MI K +K QRPKYSTRSKDR+KI  DQ+KAAKSN D D E E   EDED+ETLGGFIV DEVD  EQMD+D  EEEE LD
Subjt:  KKGTNSEDEDWTDENEDDVEMIAKTKKFQRPKYSTRSKDRHKIQQDQKKAAKSNNDSDEEDEDEDEDEDEETLGGFIVTDEVDTEEQMDQDDEEEEELLD

Query:  DDEEEED
        D+++EED
Subjt:  DDEEEED

A0A5D3BXV5 Nucleolin 1

1.2e-116

76.55

Show/hide

Query:  MEITGDDGSKLILRESVTIIGRGSGFASKDRTISRRHLLIEAKTSENSDGAFTEPRVSFEVFGCNPIWVRSAKNGEIRAFRRSEKGEMAPGESFCVGGQE
        MEI G+DGSKL+LRE VTI GRGSGFASKDRTISRRH+LIEAKTS+N++GA  EP+VSFEV G NPIWVRS+KNGEIR FRRSEKG+MAPGESFCVGGQE
Subjt:  MEITGDDGSKLILRESVTIIGRGSGFASKDRTISRRHLLIEAKTSENSDGAFTEPRVSFEVFGCNPIWVRSAKNGEIRAFRRSEKGEMAPGESFCVGGQE

Query:  PIWFELNEMAEFEEGEQIGEEFENDFATRSSDLEDIDVSGIDPLKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEGRKDS-DDDEDYGRKKKRGVRGKR
        PIWFELN++ EFEEG+ +        ++RSSD +DIDVSGIDP+KEFGFLVMGHEFECYGNRVIRD KKWDWFLD   KDS DDDEDY RKKKRGVRGKR
Subjt:  PIWFELNEMAEFEEGEQIGEEFENDFATRSSDLEDIDVSGIDPLKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEGRKDS-DDDEDYGRKKKRGVRGKR

Query:  KKGTNSEDEDWTDENEDDVEMIAKTKKFQRPKYSTRSKDRHKIQQDQKKAAKSNNDSDEEDEDEDEDEDEETLGGFIVTDEVDTEEQMDQDDEEEEELLD
        KKG NS+DEDWTDENED V+MI K +K QRPKYSTRSKDR+KI  DQ+KAAKSN D D E E   EDED+ETLGGFIV DEVD  EQMD+D  EEEE LD
Subjt:  KKGTNSEDEDWTDENEDDVEMIAKTKKFQRPKYSTRSKDRHKIQQDQKKAAKSNNDSDEEDEDEDEDEDEETLGGFIVTDEVDTEEQMDQDDEEEEELLD

Query:  DDEEEED
        D+++EED
Subjt:  DDEEEED

A0A6J1DEJ6 protein bfr2

3.9e-120

77.35

Show/hide

Query:  MEITGDDGSKLILRESVTIIGRGSGFASKDRTISRRHLLIEAKTSENSDGAFTEPRVSFEVFGCNPIWVRSAKNGEIRAFRRSEKGEMAPGESFCVGGQE
        MEI G+DGSKL++ E VTI GRGSGFASKDRT+SRRHLLIEAKTSEN DGA  EP +SFEV G NPIWVRS KNGEIR FRRSEKGE+APGESFCVGGQE
Subjt:  MEITGDDGSKLILRESVTIIGRGSGFASKDRTISRRHLLIEAKTSENSDGAFTEPRVSFEVFGCNPIWVRSAKNGEIRAFRRSEKGEMAPGESFCVGGQE

Query:  PIWFELNEMAEFEEGEQIGEEFENDFA---TRSSDLEDIDVSGIDPLKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEGRKDSDDDEDYGRKKKRGVRG
        P WF+LN++AE EEG++I  + E+ FA   TRSSD EDIDVSGIDP+KEFGFLVMGHEFECYGNRVIRDAKKWDWFLDE RK SDDDEDYGR+K+RGVRG
Subjt:  PIWFELNEMAEFEEGEQIGEEFENDFA---TRSSDLEDIDVSGIDPLKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEGRKDSDDDEDYGRKKKRGVRG

Query:  KRKKGTNSEDEDWTDENEDDVEMIAKTKKFQRPKYSTRSKDRHKIQQDQKKAAKSNNDSDEEDEDEDEDEDEETLGGFIVTDEVDTEEQMDQDDEEEEEL
        KRKKG NS+DEDWTDENED VEMIAK KK QRPKYSTRSKD +K  +DQ KAA SN D DE      EDED+ETLGGFIV DEVD EEQMD+D  EEEE 
Subjt:  KRKKGTNSEDEDWTDENEDDVEMIAKTKKFQRPKYSTRSKDRHKIQQDQKKAAKSNNDSDEEDEDEDEDEDEETLGGFIVTDEVDTEEQMDQDDEEEEEL

Query:  LDDDEEEED
         DDD+E+ED
Subjt:  LDDDEEEED

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G13780.1 SMAD/FHA domain-containing protein

1.1e-50

42.22

Show/hide

Query:  MEITGDDGSKLILRESV-TIIGRGSGFASKDRTISRRHLLIEAKTSENSDGAFTEP--RVSFEVFGCNPIWVRSAKNG-EIRAFRRSEKGEMAPGESFCV
        MEI G+DG+KL L+  V  + GRG+GF ++D T+SRRH+ +  K +     A TEP   VSFEV G NP+W+R+ + G +I+  R+ E GE+A G+ FCV
Subjt:  MEITGDDGSKLILRESV-TIIGRGSGFASKDRTISRRHLLIEAKTSENSDGAFTEP--RVSFEVFGCNPIWVRSAKNG-EIRAFRRSEKGEMAPGESFCV

Query:  GGQEPIWFELNEMAEFEEGEQIGEEFENDFATRSSDLEDIDVSGIDPLKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEGRK-DSDDDEDYGRKKKRGV
         G  PIWF L    E  E              R+ D  +I+++ IDP+KEFGFLV+G EF+ Y    +RD K+W+WFL++    +SD DED  +K ++G+
Subjt:  GGQEPIWFELNEMAEFEEGEQIGEEFENDFATRSSDLEDIDVSGIDPLKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEGRK-DSDDDEDYGRKKKRGV

Query:  RGKRKKGTNSEDEDWTDENEDDVEMIAKTKKFQRPKYSTRSKDRHKIQQDQKKAAKSNNDSDEED----EDEDEDEDEETLGGFIVTDEVDTEEQMDQDD
          KR++   +ED+DW+ E+++D E++ K+K+   P YSTRSK   K ++D   ++ S+N +  +     + E+ED+D+ETLGGFIV+DE   E ++++++
Subjt:  RGKRKKGTNSEDEDWTDENEDDVEMIAKTKKFQRPKYSTRSKDRHKIQQDQKKAAKSNNDSDEED----EDEDEDEDEETLGGFIVTDEVDTEEQMDQDD

Query:  EEEEELLDDDEEEED
        EEE+E   DDEE+ED
Subjt:  EEEEELLDDDEEEED

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAGATCACCGGAGACGACGGTTCAAAGCTAATTCTAAGAGAATCAGTGACGATAATCGGAAGAGGCTCAGGTTTTGCTTCAAAAGATCGAACAATATCTCGTCGTCA
CCTTTTGATCGAAGCCAAAACCTCCGAGAACAGTGATGGAGCTTTCACAGAACCTAGGGTTTCCTTCGAGGTCTTCGGCTGCAACCCTATTTGGGTTCGGAGCGCCAAAA
ATGGCGAAATCAGAGCGTTTAGAAGATCGGAGAAGGGCGAGATGGCGCCTGGTGAATCCTTCTGCGTGGGCGGCCAGGAACCGATCTGGTTCGAATTGAACGAAATGGCT
GAATTCGAAGAAGGGGAGCAAATTGGTGAGGAATTCGAGAACGATTTTGCTACGCGTTCTTCGGATTTGGAGGATATCGATGTTTCTGGCATTGATCCTCTCAAAGAATT
CGGTTTTCTTGTTATGGGACACGAGTTTGAATGCTATGGAAATCGAGTGATTCGTGATGCGAAAAAGTGGGACTGGTTTTTGGATGAGGGGAGAAAAGACAGTGATGATG
ATGAAGATTATGGGAGGAAAAAGAAGAGAGGAGTAAGAGGAAAGAGGAAGAAAGGAACAAACAGTGAGGATGAAGATTGGACAGATGAGAATGAAGATGATGTGGAAATG
ATTGCCAAAACAAAAAAGTTTCAAAGACCCAAATACTCCACAAGATCGAAAGACCGCCATAAAATTCAGCAGGATCAAAAGAAAGCTGCTAAATCCAATAATGACTCCGA
TGAAGAAGATGAGGATGAAGACGAAGACGAAGACGAAGAAACTTTAGGAGGTTTTATTGTTACTGATGAAGTAGATACTGAAGAACAGATGGATCAAGATGACGAAGAAG
AAGAAGAACTTTTGGACGATGACGAAGAGGAGGAAGATTGA

mRNA sequence

Show/hide mRNA sequence

GTCGGTGTCCGAAATTTCTGCTTCCGAAATTTTCTCAGCCGCATTAATCAATGGAGATCACCGGAGACGACGGTTCAAAGCTAATTCTAAGAGAATCAGTGACGATAATC
GGAAGAGGCTCAGGTTTTGCTTCAAAAGATCGAACAATATCTCGTCGTCACCTTTTGATCGAAGCCAAAACCTCCGAGAACAGTGATGGAGCTTTCACAGAACCTAGGGT
TTCCTTCGAGGTCTTCGGCTGCAACCCTATTTGGGTTCGGAGCGCCAAAAATGGCGAAATCAGAGCGTTTAGAAGATCGGAGAAGGGCGAGATGGCGCCTGGTGAATCCT
TCTGCGTGGGCGGCCAGGAACCGATCTGGTTCGAATTGAACGAAATGGCTGAATTCGAAGAAGGGGAGCAAATTGGTGAGGAATTCGAGAACGATTTTGCTACGCGTTCT
TCGGATTTGGAGGATATCGATGTTTCTGGCATTGATCCTCTCAAAGAATTCGGTTTTCTTGTTATGGGACACGAGTTTGAATGCTATGGAAATCGAGTGATTCGTGATGC
GAAAAAGTGGGACTGGTTTTTGGATGAGGGGAGAAAAGACAGTGATGATGATGAAGATTATGGGAGGAAAAAGAAGAGAGGAGTAAGAGGAAAGAGGAAGAAAGGAACAA
ACAGTGAGGATGAAGATTGGACAGATGAGAATGAAGATGATGTGGAAATGATTGCCAAAACAAAAAAGTTTCAAAGACCCAAATACTCCACAAGATCGAAAGACCGCCAT
AAAATTCAGCAGGATCAAAAGAAAGCTGCTAAATCCAATAATGACTCCGATGAAGAAGATGAGGATGAAGACGAAGACGAAGACGAAGAAACTTTAGGAGGTTTTATTGT
TACTGATGAAGTAGATACTGAAGAACAGATGGATCAAGATGACGAAGAAGAAGAAGAACTTTTGGACGATGACGAAGAGGAGGAAGATTGATGGGGCTAATGGCTTTGGT
TGTTGGCTTCTGCTAACTTAGGCTTGTTATAGAGAGGTTTGTCTTTGTATATTACTTACCTTTTTAGTTTCATAATCTTGTGAAATATAGAAGAAGGATCAGTTTTATGC
TGTATTTCTATTTCAATTTTTTGATTGAAAATGCTCTTCAGTTTCTTCTCCATTTAAAAAAAAAATTATTTAAAATGTTGACAATTTTGATAACCTTCCTGTAATTTTGT
TTTGTCTCTTGTTCTATGACTGATCAACTCATCTCATTTACAGACCTTTG

Protein sequence

Show/hide protein sequence

MEITGDDGSKLILRESVTIIGRGSGFASKDRTISRRHLLIEAKTSENSDGAFTEPRVSFEVFGCNPIWVRSAKNGEIRAFRRSEKGEMAPGESFCVGGQEPIWFELNEMA
EFEEGEQIGEEFENDFATRSSDLEDIDVSGIDPLKEFGFLVMGHEFECYGNRVIRDAKKWDWFLDEGRKDSDDDEDYGRKKKRGVRGKRKKGTNSEDEDWTDENEDDVEM
IAKTKKFQRPKYSTRSKDRHKIQQDQKKAAKSNNDSDEEDEDEDEDEDEETLGGFIVTDEVDTEEQMDQDDEEEEELLDDDEEEED

Sed0011511 (gene) of Chayote v1 genome