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Sed0011520 (gene) of Chayote v1 genome

Gene IDSed0011520
OrganismSechium edule (Chayote v1)
DescriptionDetected protein of confused Function
Genome locationLG08:36893135..36893467
RNA-Seq ExpressionSed0011520
SyntenySed0011520
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6584084.1 hypothetical protein SDJN03_20016, partial [Cucurbita argyrosperma subsp. sororia]7.4e-3978.57Show/hide
Query:  MSVLV--KKNGYSRMEKEDPDEKRHRKAQFLIYKIMEQANNGNKRRPSWLRIRIRKFKLRIGRRLKKMKKVLSMSFSTARIGICNQFGQLKTCKSLFGRA
        MS LV  ++NGYSRMEKEDP+EK+HR+AQFLIYKIMEQAN+G++RR S LRIRIRKFKLRIGRRLKK+KK +SM   TARIGIC QFGQL+TCKSLFGRA
Subjt:  MSVLV--KKNGYSRMEKEDPDEKRHRKAQFLIYKIMEQANNGNKRRPSWLRIRIRKFKLRIGRRLKKMKKVLSMSFSTARIGICNQFGQLKTCKSLFGRA

Query:  KEQNLAFPSLVT
        KE+ LAFPSLV+
Subjt:  KEQNLAFPSLVT
KAG7019685.1 hypothetical protein SDJN02_18648, partial [Cucurbita argyrosperma subsp. argyrosperma]4.8e-3877.68Show/hide
Query:  MSVLV--KKNGYSRMEKEDPDEKRHRKAQFLIYKIMEQANNGNKRRPSWLRIRIRKFKLRIGRRLKKMKKVLSMSFSTARIGICNQFGQLKTCKSLFGRA
        MS LV  ++NGYSRMEKEDP+EK+HR+AQFLIYKIMEQAN+G++RR S LRIRIRKFKLRIGRRLKK+KK +SM   TAR GIC QFGQL+TCKSLFGRA
Subjt:  MSVLV--KKNGYSRMEKEDPDEKRHRKAQFLIYKIMEQANNGNKRRPSWLRIRIRKFKLRIGRRLKKMKKVLSMSFSTARIGICNQFGQLKTCKSLFGRA

Query:  KEQNLAFPSLVT
        KE+ LAFPSLV+
Subjt:  KEQNLAFPSLVT
KGN64527.1 hypothetical protein Csa_013452 [Cucumis sativus]3.1e-3775.45Show/hide
Query:  MSVLV---KKNGYSRMEKEDPDEKRHRKAQFLIYKIMEQANNGNKRRPSWLRIRIRKFKLRIGRRLKKMKKVLSMSFSTARIGICNQFGQLKTCKSLFGR
        MSVL+   +  GYS+MEKEDPDEK+HR+AQFLIYKIMEQA+NG+KRRPS LRIRIRKFKLR+GRR KKMKK ++MSFSTARIGICNQFGQL++CKSLFG+
Subjt:  MSVLV---KKNGYSRMEKEDPDEKRHRKAQFLIYKIMEQANNGNKRRPSWLRIRIRKFKLRIGRRLKKMKKVLSMSFSTARIGICNQFGQLKTCKSLFGR

Query:  AKEQNLAFPS
         K + L FP+
Subjt:  AKEQNLAFPS
XP_022140046.1 uncharacterized protein LOC111010796 [Momordica charantia]4.5e-3674.34Show/hide
Query:  MSVLV--KKNGYSRMEKEDPDEKRHRKAQFLIYKIMEQANNGNKRRPSWLRIRIRKFKLRIGRRLKKMKKVLSMSFSTARIGICNQFGQLKTCKSLFGRA
        MSV++  K++GYSRMEKEDP+EK+HR+AQFLIYKIMEQAN+G++RRP+ LRIRIRKFKLRIGRRLKK++K +S S STARIGIC Q GQL+TCKSLFGR 
Subjt:  MSVLV--KKNGYSRMEKEDPDEKRHRKAQFLIYKIMEQANNGNKRRPSWLRIRIRKFKLRIGRRLKKMKKVLSMSFSTARIGICNQFGQLKTCKSLFGRA

Query:  -KEQNLAFPSLVT
         K + LAFPSLV+
Subjt:  -KEQNLAFPSLVT
XP_023001322.1 uncharacterized protein LOC111495486 [Cucurbita maxima]4.8e-3877.68Show/hide
Query:  MSVLV--KKNGYSRMEKEDPDEKRHRKAQFLIYKIMEQANNGNKRRPSWLRIRIRKFKLRIGRRLKKMKKVLSMSFSTARIGICNQFGQLKTCKSLFGRA
        MS LV  ++NGYSRMEKEDP+EK+HR+AQFLIYKIMEQAN+G +RR S LRIRIRKFKLRIGRRLKK+KK +SM F TAR GIC QFGQL+TCKSLFGR 
Subjt:  MSVLV--KKNGYSRMEKEDPDEKRHRKAQFLIYKIMEQANNGNKRRPSWLRIRIRKFKLRIGRRLKKMKKVLSMSFSTARIGICNQFGQLKTCKSLFGRA

Query:  KEQNLAFPSLVT
        KE+ LAFPSLV+
Subjt:  KEQNLAFPSLVT
TrEMBL top hitse value%identityAlignment
A0A0A0LUT4 Uncharacterized protein1.5e-3775.45Show/hide
Query:  MSVLV---KKNGYSRMEKEDPDEKRHRKAQFLIYKIMEQANNGNKRRPSWLRIRIRKFKLRIGRRLKKMKKVLSMSFSTARIGICNQFGQLKTCKSLFGR
        MSVL+   +  GYS+MEKEDPDEK+HR+AQFLIYKIMEQA+NG+KRRPS LRIRIRKFKLR+GRR KKMKK ++MSFSTARIGICNQFGQL++CKSLFG+
Subjt:  MSVLV---KKNGYSRMEKEDPDEKRHRKAQFLIYKIMEQANNGNKRRPSWLRIRIRKFKLRIGRRLKKMKKVLSMSFSTARIGICNQFGQLKTCKSLFGR

Query:  AKEQNLAFPS
         K + L FP+
Subjt:  AKEQNLAFPS
A0A540M3N5 Uncharacterized protein4.4e-2153.04Show/hide
Query:  MSVLVKKN--GYSRMEKEDPDEKRHRKAQFLIYKIMEQANNGNKRRPSWLRIRIRKFKLRIGRRLKKMKKVLSMSFSTARIGICNQ-FGQLKTCKSLFGR
        M++ ++K+   YS+M+KEDP+E  HR+AQFLIYK+M+Q     +RRPS LRIR+RK KL+IGRRLKK++K + +S S AR+ +  Q F QLKTCK+LFGR
Subjt:  MSVLVKKN--GYSRMEKEDPDEKRHRKAQFLIYKIMEQANNGNKRRPSWLRIRIRKFKLRIGRRLKKMKKVLSMSFSTARIGICNQ-FGQLKTCKSLFGR

Query:  AKEQNL--AFPSLVT
          + N+    P+L T
Subjt:  AKEQNL--AFPSLVT
A0A6J1CEK3 uncharacterized protein LOC1110107962.2e-3674.34Show/hide
Query:  MSVLV--KKNGYSRMEKEDPDEKRHRKAQFLIYKIMEQANNGNKRRPSWLRIRIRKFKLRIGRRLKKMKKVLSMSFSTARIGICNQFGQLKTCKSLFGRA
        MSV++  K++GYSRMEKEDP+EK+HR+AQFLIYKIMEQAN+G++RRP+ LRIRIRKFKLRIGRRLKK++K +S S STARIGIC Q GQL+TCKSLFGR 
Subjt:  MSVLV--KKNGYSRMEKEDPDEKRHRKAQFLIYKIMEQANNGNKRRPSWLRIRIRKFKLRIGRRLKKMKKVLSMSFSTARIGICNQFGQLKTCKSLFGRA

Query:  -KEQNLAFPSLVT
         K + LAFPSLV+
Subjt:  -KEQNLAFPSLVT
A0A6J1KG77 uncharacterized protein LOC1114954862.3e-3877.68Show/hide
Query:  MSVLV--KKNGYSRMEKEDPDEKRHRKAQFLIYKIMEQANNGNKRRPSWLRIRIRKFKLRIGRRLKKMKKVLSMSFSTARIGICNQFGQLKTCKSLFGRA
        MS LV  ++NGYSRMEKEDP+EK+HR+AQFLIYKIMEQAN+G +RR S LRIRIRKFKLRIGRRLKK+KK +SM F TAR GIC QFGQL+TCKSLFGR 
Subjt:  MSVLV--KKNGYSRMEKEDPDEKRHRKAQFLIYKIMEQANNGNKRRPSWLRIRIRKFKLRIGRRLKKMKKVLSMSFSTARIGICNQFGQLKTCKSLFGRA

Query:  KEQNLAFPSLVT
        KE+ LAFPSLV+
Subjt:  KEQNLAFPSLVT
W9RFE3 Uncharacterized protein7.5e-2155.79Show/hide
Query:  VLVKKNGYSRMEKEDPDEKRHRKAQFLIYKIMEQANNGNKRRPSWLRIRIRKFKLRIGRRLKKMKKVLSMSFSTARIGICNQF-GQLKTCKSLFG
        VL K N YS+++KEDP+E+  R+AQFLIYK+MEQA++ ++RRPS+LRIRIRK K++IG+RL K++K + +S S A++ +C Q   Q KTC+ LFG
Subjt:  VLVKKNGYSRMEKEDPDEKRHRKAQFLIYKIMEQANNGNKRRPSWLRIRIRKFKLRIGRRLKKMKKVLSMSFSTARIGICNQF-GQLKTCKSLFG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G11655.1 unknown protein2.7e-0742.62Show/hide
Query:  YSRMEKEDPDEKRHRKAQFLIYKIMEQANNGNKRRP--SWLRIRIRKFKLRIGRRLKKMKK
        YS+M+KEDP+E   R+A+FLIYK +++A+  ++R P  S++R+++   K++IG+RL K+++
Subjt:  YSRMEKEDPDEKRHRKAQFLIYKIMEQANNGNKRRP--SWLRIRIRKFKLRIGRRLKKMKK
AT4G04745.1 unknown protein2.7e-0741.56Show/hide
Query:  MSVLVKKN--GYSRMEKEDPDEKRHRKAQFLIYKIMEQAN-----NGNKRRPS--WLRIRIRKFKLRIGRRLKKMKK
        M+++VK +   Y++MEKEDP E  HR+AQFLI K++E+A+     +  +RR S   + IR+   ++RIG++L+K++K
Subjt:  MSVLVKKN--GYSRMEKEDPDEKRHRKAQFLIYKIMEQAN-----NGNKRRPS--WLRIRIRKFKLRIGRRLKKMKK
AT4G21902.1 unknown protein3.3e-0533.33Show/hide
Query:  MSVLVKKNGYSRMEKEDPDEKRHRKAQFLIYKIMEQAN----NGNKRRPSWLRI---RIRKFKLRIGRRLKKMKK
        M+++   N Y+++EKED +E  HR+AQFLI+KI+++A+       ++R + +++   R+   +++IG++L+K++K
Subjt:  MSVLVKKNGYSRMEKEDPDEKRHRKAQFLIYKIMEQAN----NGNKRRPSWLRI---RIRKFKLRIGRRLKKMKK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGTTTTGGTGAAGAAAAATGGATACTCAAGAATGGAAAAAGAAGACCCAGATGAGAAAAGGCACAGAAAAGCTCAGTTTTTGATATACAAGATAATGGAGCAGGC
AAACAATGGCAACAAGAGAAGACCCTCATGGCTTAGAATCAGAATAAGAAAGTTTAAGTTGAGGATTGGAAGGAGGTTGAAGAAGATGAAGAAGGTCTTGTCAATGAGCT
TTTCCACAGCAAGAATTGGAATTTGCAATCAATTTGGACAGCTTAAAACCTGTAAGAGCTTGTTTGGAAGAGCCAAGGAGCAAAATTTGGCATTTCCTTCTTTGGTTACT
TAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTGTTTTGGTGAAGAAAAATGGATACTCAAGAATGGAAAAAGAAGACCCAGATGAGAAAAGGCACAGAAAAGCTCAGTTTTTGATATACAAGATAATGGAGCAGGC
AAACAATGGCAACAAGAGAAGACCCTCATGGCTTAGAATCAGAATAAGAAAGTTTAAGTTGAGGATTGGAAGGAGGTTGAAGAAGATGAAGAAGGTCTTGTCAATGAGCT
TTTCCACAGCAAGAATTGGAATTTGCAATCAATTTGGACAGCTTAAAACCTGTAAGAGCTTGTTTGGAAGAGCCAAGGAGCAAAATTTGGCATTTCCTTCTTTGGTTACT
TAA
Protein sequenceShow/hide protein sequence
MSVLVKKNGYSRMEKEDPDEKRHRKAQFLIYKIMEQANNGNKRRPSWLRIRIRKFKLRIGRRLKKMKKVLSMSFSTARIGICNQFGQLKTCKSLFGRAKEQNLAFPSLVT