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Sed0011531 (gene) of Chayote v1 genome

Gene IDSed0011531
OrganismSechium edule (Chayote v1)
DescriptionTetratricopeptide-like helical
Genome locationLG13:7175818..7177709
RNA-Seq ExpressionSed0011531
SyntenySed0011531
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577295.1 hypothetical protein SDJN03_24869, partial [Cucurbita argyrosperma subsp. sororia]1.8e-0879.55Show/hide
Query:  MSVSLEALAMAGIDSDECAMNAREWERNEAEGDVPPHLLAEEDE
        MSVSLEALAMAGI S+E AM+A EWERNE E DVPPHLLA+ED+
Subjt:  MSVSLEALAMAGIDSDECAMNAREWERNEAEGDVPPHLLAEEDE

KAG6600647.1 hypothetical protein SDJN03_05880, partial [Cucurbita argyrosperma subsp. sororia]4.0e-0879.07Show/hide
Query:  MSVSLEALAMAGIDSDECAMNAREWERNEAEGDVPPHLLAEED
        MSVSLEALAMAGIDS+E AM+A EWERNE E ++PPHLLA+ED
Subjt:  MSVSLEALAMAGIDSDECAMNAREWERNEAEGDVPPHLLAEED

KAG7015382.1 hypothetical protein SDJN02_23017, partial [Cucurbita argyrosperma subsp. argyrosperma]6.8e-0879.07Show/hide
Query:  MSVSLEALAMAGIDSDECAMNAREWERNEAEGDVPPHLLAEED
        MSVSLEALAMAGIDS+E AM+A+EWER+E   DVPPHLL EED
Subjt:  MSVSLEALAMAGIDSDECAMNAREWERNEAEGDVPPHLLAEED

KAG7015383.1 hypothetical protein SDJN02_23018, partial [Cucurbita argyrosperma subsp. argyrosperma]1.8e-0879.55Show/hide
Query:  MSVSLEALAMAGIDSDECAMNAREWERNEAEGDVPPHLLAEEDE
        MSVSLEALAMAGI S+E AM+A EWERNE E DVPPHLLA+ED+
Subjt:  MSVSLEALAMAGIDSDECAMNAREWERNEAEGDVPPHLLAEEDE

XP_022943015.1 uncharacterized protein LOC111447880 [Cucurbita moschata]6.1e-0979.55Show/hide
Query:  MSVSLEALAMAGIDSDECAMNAREWERNEAEGDVPPHLLAEEDE
        MSVSLEALAMAGIDS+E AM+A EWERNE E D+PPHLLA+ED+
Subjt:  MSVSLEALAMAGIDSDECAMNAREWERNEAEGDVPPHLLAEEDE

TrEMBL top hitse value%identityAlignment
A0A0A0KWE7 Uncharacterized protein3.1e-0675Show/hide
Query:  MSVSLEALAMAGIDSDECAMNAREWERNEAEGDVPPHLLAEEDE
        MSVSLEALAMAGIDS+E AM+A EWERNE +  VPPHLLA+E++
Subjt:  MSVSLEALAMAGIDSDECAMNAREWERNEAEGDVPPHLLAEEDE

A0A1Q3CWR7 Uncharacterized protein4.4e-0560.87Show/hide
Query:  MSVSLEALAMAGIDSDECAMNAREWERNEAEGDVPPHLLAEEDEVL
        MSVSLEALAMAG+D +E  ++  EWER + E   PPHLLAEE+E++
Subjt:  MSVSLEALAMAGIDSDECAMNAREWERNEAEGDVPPHLLAEEDEVL

A0A5A7TS68 Tetratricopeptide-like helical6.8e-0672.73Show/hide
Query:  MSVSLEALAMAGIDSDECAMNAREWERNEAEGDVPPHLLAEEDE
        MSVSLEALAMAGIDS+E  M+A+EWERNE +  VPPHLLA+E++
Subjt:  MSVSLEALAMAGIDSDECAMNAREWERNEAEGDVPPHLLAEEDE

A0A5D3CZU0 Tetratricopeptide-like helical6.8e-0672.73Show/hide
Query:  MSVSLEALAMAGIDSDECAMNAREWERNEAEGDVPPHLLAEEDE
        MSVSLEALAMAGIDS+E  M+A+EWERNE +  VPPHLLA+E++
Subjt:  MSVSLEALAMAGIDSDECAMNAREWERNEAEGDVPPHLLAEEDE

A0A6J1FX98 uncharacterized protein LOC1114478803.0e-0979.55Show/hide
Query:  MSVSLEALAMAGIDSDECAMNAREWERNEAEGDVPPHLLAEEDE
        MSVSLEALAMAGIDS+E AM+A EWERNE E D+PPHLLA+ED+
Subjt:  MSVSLEALAMAGIDSDECAMNAREWERNEAEGDVPPHLLAEEDE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGTTTCTTTAGAAGCTTTGGCCATGGCGGGGATCGATTCTGACGAGTGCGCTATGAATGCTCGAGAATGGGAAAGAAATGAAGCGGAGGGTGACGTTCCACCACA
TTTACTAGCCGAGGAAGACGAGGTTTTGGCAATGGAGGAAATTGATTATGATGATTGTTCTATAGACGCTGAAGAATGGGAAGTTCTTCAAAGACAGAGCGTTCCGCCGC
ATTCGTTAGCCGAAGAAGACGAAGCTAATCAAGATGTAATGAGTAGAGCTCGTAGCTATGAGTCTCCGGTGACCGGATTCTTCCGCAGATGGTGGCGGAGGATGGCGGGG
CTGATGCTGTTCTTTGCAAGCAGAACCAATAGTAATAATGCAGAGAGAGAACACAGTGTTCTGACGAGGAGTAATATCAGAAATAAACAAAATTTTCAATTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCGGTTTCTTTAGAAGCTTTGGCCATGGCGGGGATCGATTCTGACGAGTGCGCTATGAATGCTCGAGAATGGGAAAGAAATGAAGCGGAGGGTGACGTTCCACCACA
TTTACTAGCCGAGGAAGACGAGGTTTTGGCAATGGAGGAAATTGATTATGATGATTGTTCTATAGACGCTGAAGAATGGGAAGTTCTTCAAAGACAGAGCGTTCCGCCGC
ATTCGTTAGCCGAAGAAGACGAAGCTAATCAAGATGTAATGAGTAGAGCTCGTAGCTATGAGTCTCCGGTGACCGGATTCTTCCGCAGATGGTGGCGGAGGATGGCGGGG
CTGATGCTGTTCTTTGCAAGCAGAACCAATAGTAATAATGCAGAGAGAGAACACAGTGTTCTGACGAGGAGTAATATCAGAAATAAACAAAATTTTCAATTTTAG
Protein sequenceShow/hide protein sequence
MSVSLEALAMAGIDSDECAMNAREWERNEAEGDVPPHLLAEEDEVLAMEEIDYDDCSIDAEEWEVLQRQSVPPHSLAEEDEANQDVMSRARSYESPVTGFFRRWWRRMAG
LMLFFASRTNSNNAEREHSVLTRSNIRNKQNFQF