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Sed0011536 (gene) of Chayote v1 genome

Gene IDSed0011536
OrganismSechium edule (Chayote v1)
Descriptionmucin-1
Genome locationLG06:4299734..4300453
RNA-Seq ExpressionSed0011536
SyntenySed0011536
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0066977.1 mucin-1 [Cucumis melo var. makuwa]4.1e-1851.25Show/hide
Query:  MTSQSLLVLALILVVAVVGVYSEAPTTSPSASPEKASNKTSDKASNTTSEAPSPSADKANSTASPTASPTASPKANSTDSKNSTKSSSPSPSPKASSPSS
        M SQS+LV ALI V AV GV++EAPT SPS SP       S KAS + SE+PSPS          ++SP ASPKA+         S + SPSP ASSPSS
Subjt:  MTSQSLLVLALILVVAVVGVYSEAPTTSPSASPEKASNKTSDKASNTTSEAPSPSADKANSTASPTASPTASPKANSTDSKNSTKSSSPSPSPKASSPSS

Query:  SSKAPSAESPAASTPKSSPSGSPSTSPSSSPASDSPANSPAADSPSADSPASDSPAGSPADSPAASSPGSDASSPPSPDAADGP-AADGPASADGPATAD
        S    S+++P + +P SSP  SPS SP  SPA+DSP          ADSPA+DSPA + AD+P A+SP SD SSPPSPDAAD P AADGP +ADGP TAD
Subjt:  SSKAPSAESPAASTPKSSPSGSPSTSPSSSPASDSPANSPAADSPSADSPASDSPAGSPADSPAASSPGSDASSPPSPDAADGP-AADGPASADGPATAD

Query:  GPAAADGPSATDSEPAGAAALKFTTATFAASVVIAGMFAF
         P  AD P+  D   +    LK T+A     V+ AG +AF
Subjt:  GPAAADGPSATDSEPAGAAALKFTTATFAASVVIAGMFAF

KAG6581073.1 hypothetical protein SDJN03_21075, partial [Cucurbita argyrosperma subsp. sororia]8.0e-1446.69Show/hide
Query:  MTSQS-LLVLALILVVAVVGVYSEAPTTSPSASPEKASNKTSDKASNTTSEAPSPSADKANSTA-SPTASPTASPKANSTDSKNSTKSSSPSPSP---KA
        M SQS ++V ALI V AV G ++EAPT SPS SP       + K++ + SEA SPS+  A+S A +P  +P  +P     D+   T + +P+ +P    A
Subjt:  MTSQS-LLVLALILVVAVVGVYSEAPTTSPSASPEKASNKTSDKASNTTSEAPSPSADKANSTA-SPTASPTASPKANSTDSKNSTKSSSPSPSP---KA

Query:  SSPSSSSKAPSAESPAASTPKS-SPSGSPSTSPSSSPASDSPANSPAADSPSADSPASDSPAGSPADSPA-ASSPGSDASSPPS--PDAADGPAADGPAS
         +P+ +     A++PAAS+  S SPS S  TSPS +PAS+SP +SP +    + SPA+DSPA SPADS + A+SP SD+SSPPS  PDAAD P ADGP+ 
Subjt:  SSPSSSSKAPSAESPAASTPKS-SPSGSPSTSPSSSPASDSPANSPAADSPSADSPASDSPAGSPADSPA-ASSPGSDASSPPS--PDAADGPAADGPAS

Query:  ADGPATADGPAAADG---PSATDS----EPAGAAALKFTTATF--AASVVIAGMFAF
        ADGP+ ADGP+ ADG    S  DS      +G +ALK T+A    A +V +AG+FAF
Subjt:  ADGPATADGPAAADG---PSATDS----EPAGAAALKFTTATF--AASVVIAGMFAF

XP_008450043.1 PREDICTED: mucin-1 [Cucumis melo]4.1e-1851.25Show/hide
Query:  MTSQSLLVLALILVVAVVGVYSEAPTTSPSASPEKASNKTSDKASNTTSEAPSPSADKANSTASPTASPTASPKANSTDSKNSTKSSSPSPSPKASSPSS
        M SQS+LV ALI V AV GV++EAPT SPS SP       S KAS + SE+PSPS          ++SP ASPKA+         S + SPSP ASSPSS
Subjt:  MTSQSLLVLALILVVAVVGVYSEAPTTSPSASPEKASNKTSDKASNTTSEAPSPSADKANSTASPTASPTASPKANSTDSKNSTKSSSPSPSPKASSPSS

Query:  SSKAPSAESPAASTPKSSPSGSPSTSPSSSPASDSPANSPAADSPSADSPASDSPAGSPADSPAASSPGSDASSPPSPDAADGP-AADGPASADGPATAD
        S    S+++P + +P SSP  SPS SP  SPA+DSP          ADSPA+DSPA + AD+P A+SP SD SSPPSPDAAD P AADGP +ADGP TAD
Subjt:  SSKAPSAESPAASTPKSSPSGSPSTSPSSSPASDSPANSPAADSPSADSPASDSPAGSPADSPAASSPGSDASSPPSPDAADGP-AADGPASADGPATAD

Query:  GPAAADGPSATDSEPAGAAALKFTTATFAASVVIAGMFAF
         P  AD P+  D   +    LK T+A     V+ AG +AF
Subjt:  GPAAADGPSATDSEPAGAAALKFTTATFAASVVIAGMFAF

XP_022934589.1 mucin-1-like [Cucurbita moschata]1.2e-1447.01Show/hide
Query:  MTSQS-LLVLALILVVAVVGVYSEAPTTSPSASPEKASNKTSDKASNTTSEAPSPSADKANSTASPTASPTASPKANSTDSKNSTKSSSPSPSPKASSPS
        M SQS +LV ALI V AV G ++EAPT +PS SP       + K++ + SEA SPS       +SP +SP  +P     D+   T + +P+ +P A +P+
Subjt:  MTSQS-LLVLALILVVAVVGVYSEAPTTSPSASPEKASNKTSDKASNTTSEAPSPSADKANSTASPTASPTASPKANSTDSKNSTKSSSPSPSPKASSPS

Query:  SSSKAPSAESPAASTPKS-SPSGSPSTSPSSSPASDSPANSPAADSPSADSPASDSPAGSPADSPA-ASSPGSDASSPPS--PDAADGPAADGPASADGP
         +     A++PAAS+  S SPS S  TSPS +PAS+SP +SP +    + SPA+DSPA SPADS + A+SP SD+SSPPS  PDAAD P ADGP+ ADGP
Subjt:  SSSKAPSAESPAASTPKS-SPSGSPSTSPSSSPASDSPANSPAADSPSADSPASDSPAGSPADSPA-ASSPGSDASSPPS--PDAADGPAADGPASADGP

Query:  ATADGPAAADG---PSATDS----EPAGAAALKFTTATFAASVVIAGMFAF
        + ADGP+ ADG    S  DS      +G +ALK T+A    +V +AG+FAF
Subjt:  ATADGPAAADG---PSATDS----EPAGAAALKFTTATFAASVVIAGMFAF

XP_031737954.1 classical arabinogalactan protein 11 [Cucumis sativus]4.1e-2653.44Show/hide
Query:  MTSQSLLVLALILVVAVVGVYSEAPTTSPSASPEKASNKTSDKASNTTSEAPSPSADKANSTASPTASPTASPKANSTDSKNSTKSSSPSPSPKASSPSS
        M SQ++LV ALI + AV GV++EAPT SPS SP       S KAS + SE+PSP      S++SP  SP ASP+             + SPSP ASSPSS
Subjt:  MTSQSLLVLALILVVAVVGVYSEAPTTSPSASPEKASNKTSDKASNTTSEAPSPSADKANSTASPTASPTASPKANSTDSKNSTKSSSPSPSPKASSPSS

Query:  SSKAPSAESPAASTPKSSPSGSPSTSPSSSPASDSPANSPAADSPSADSPASDSPAGSPADSPAASSPGSDASSPPSPDAADGPAADGPASADGPATADG
        SS AP++ SP      SSP+ SPS SP  SPA+DSP     +DSP++DSP +DSPA SPAD+P A+SP SD SSPPSPDAAD P ADGPA+ADGP  ADG
Subjt:  SSKAPSAESPAASTPKSSPSGSPSTSPSSSPASDSPANSPAADSPSADSPASDSPAGSPADSPAASSPGSDASSPPSPDAADGPAADGPASADGPATADG

Query:  PAAADGPSATDSEPAGAAA--------LKFTTATFAASVVIAGMFAF
        P AADGP A DS PA + A        LK T+A     V   G FAF
Subjt:  PAAADGPSATDSEPAGAAA--------LKFTTATFAASVVIAGMFAF

TrEMBL top hitse value%identityAlignment
A0A0A0LDP4 Uncharacterized protein1.3e-2555.81Show/hide
Query:  MTSQSLLVLALILVVAVVGVYSEAPTTSPSASPEKASNKTSDKASNTTSEAPSPSADKANSTASPTASPTASPKANSTDSKNSTKSSSPSPSPKASSPSS
        M SQ++LV ALI + AV GV++EAPT SPS SP       S KAS + SE+PSP      S++SP  SP ASP+             + SPSP ASSPSS
Subjt:  MTSQSLLVLALILVVAVVGVYSEAPTTSPSASPEKASNKTSDKASNTTSEAPSPSADKANSTASPTASPTASPKANSTDSKNSTKSSSPSPSPKASSPSS

Query:  SSKAPSAESPAASTPKSSPSGSPSTSPSSSPASDSPANSPAADSPSADSPASDSPAGSPADSPAASSPGSDASSPPSPDAADGPAADGPASADGPATADG
        SS AP++ SP      SSP+ SPS SP  SPA+DSP     +DSP++DSP +DSPA SPAD+P A+SP SD SSPPSPDAAD P ADGPA+ADGP  ADG
Subjt:  SSKAPSAESPAASTPKSSPSGSPSTSPSSSPASDSPANSPAADSPSADSPASDSPAGSPADSPAASSPGSDASSPPSPDAADGPAADGPASADGPATADG

Query:  PAAADGPSATDSEPA
        P AADGP+A D   A
Subjt:  PAAADGPSATDSEPA

A0A1S3BND1 mucin-12.0e-1851.25Show/hide
Query:  MTSQSLLVLALILVVAVVGVYSEAPTTSPSASPEKASNKTSDKASNTTSEAPSPSADKANSTASPTASPTASPKANSTDSKNSTKSSSPSPSPKASSPSS
        M SQS+LV ALI V AV GV++EAPT SPS SP       S KAS + SE+PSPS          ++SP ASPKA+         S + SPSP ASSPSS
Subjt:  MTSQSLLVLALILVVAVVGVYSEAPTTSPSASPEKASNKTSDKASNTTSEAPSPSADKANSTASPTASPTASPKANSTDSKNSTKSSSPSPSPKASSPSS

Query:  SSKAPSAESPAASTPKSSPSGSPSTSPSSSPASDSPANSPAADSPSADSPASDSPAGSPADSPAASSPGSDASSPPSPDAADGP-AADGPASADGPATAD
        S    S+++P + +P SSP  SPS SP  SPA+DSP          ADSPA+DSPA + AD+P A+SP SD SSPPSPDAAD P AADGP +ADGP TAD
Subjt:  SSKAPSAESPAASTPKSSPSGSPSTSPSSSPASDSPANSPAADSPSADSPASDSPAGSPADSPAASSPGSDASSPPSPDAADGP-AADGPASADGPATAD

Query:  GPAAADGPSATDSEPAGAAALKFTTATFAASVVIAGMFAF
         P  AD P+  D   +    LK T+A     V+ AG +AF
Subjt:  GPAAADGPSATDSEPAGAAALKFTTATFAASVVIAGMFAF

A0A5A7VIK3 Mucin-12.0e-1851.25Show/hide
Query:  MTSQSLLVLALILVVAVVGVYSEAPTTSPSASPEKASNKTSDKASNTTSEAPSPSADKANSTASPTASPTASPKANSTDSKNSTKSSSPSPSPKASSPSS
        M SQS+LV ALI V AV GV++EAPT SPS SP       S KAS + SE+PSPS          ++SP ASPKA+         S + SPSP ASSPSS
Subjt:  MTSQSLLVLALILVVAVVGVYSEAPTTSPSASPEKASNKTSDKASNTTSEAPSPSADKANSTASPTASPTASPKANSTDSKNSTKSSSPSPSPKASSPSS

Query:  SSKAPSAESPAASTPKSSPSGSPSTSPSSSPASDSPANSPAADSPSADSPASDSPAGSPADSPAASSPGSDASSPPSPDAADGP-AADGPASADGPATAD
        S    S+++P + +P SSP  SPS SP  SPA+DSP          ADSPA+DSPA + AD+P A+SP SD SSPPSPDAAD P AADGP +ADGP TAD
Subjt:  SSKAPSAESPAASTPKSSPSGSPSTSPSSSPASDSPANSPAADSPSADSPASDSPAGSPADSPAASSPGSDASSPPSPDAADGP-AADGPASADGPATAD

Query:  GPAAADGPSATDSEPAGAAALKFTTATFAASVVIAGMFAF
         P  AD P+  D   +    LK T+A     V+ AG +AF
Subjt:  GPAAADGPSATDSEPAGAAALKFTTATFAASVVIAGMFAF

A0A6J1F318 mucin-1-like6.0e-1547.01Show/hide
Query:  MTSQS-LLVLALILVVAVVGVYSEAPTTSPSASPEKASNKTSDKASNTTSEAPSPSADKANSTASPTASPTASPKANSTDSKNSTKSSSPSPSPKASSPS
        M SQS +LV ALI V AV G ++EAPT +PS SP       + K++ + SEA SPS       +SP +SP  +P     D+   T + +P+ +P A +P+
Subjt:  MTSQS-LLVLALILVVAVVGVYSEAPTTSPSASPEKASNKTSDKASNTTSEAPSPSADKANSTASPTASPTASPKANSTDSKNSTKSSSPSPSPKASSPS

Query:  SSSKAPSAESPAASTPKS-SPSGSPSTSPSSSPASDSPANSPAADSPSADSPASDSPAGSPADSPA-ASSPGSDASSPPS--PDAADGPAADGPASADGP
         +     A++PAAS+  S SPS S  TSPS +PAS+SP +SP +    + SPA+DSPA SPADS + A+SP SD+SSPPS  PDAAD P ADGP+ ADGP
Subjt:  SSSKAPSAESPAASTPKS-SPSGSPSTSPSSSPASDSPANSPAADSPSADSPASDSPAGSPADSPA-ASSPGSDASSPPS--PDAADGPAADGPASADGP

Query:  ATADGPAAADG---PSATDS----EPAGAAALKFTTATFAASVVIAGMFAF
        + ADGP+ ADG    S  DS      +G +ALK T+A    +V +AG+FAF
Subjt:  ATADGPAAADG---PSATDS----EPAGAAALKFTTATFAASVVIAGMFAF

A0A6J1J779 mucin-1-like5.8e-1044.4Show/hide
Query:  MTSQSLLVLALILVVAVVGVYSEAPTTSPSASP-EKASNKTSDKASNTTSEAPSPSADKANSTA-SPTASPTASPKANSTDSKNSTKSSSPSPSP---KA
        M SQS+LV ALI V AV G ++EAPT SPS SP  K++   S+ +S ++S A +P+   A++ A +P  +P  +P     D+   T + +P+ +P    A
Subjt:  MTSQSLLVLALILVVAVVGVYSEAPTTSPSASP-EKASNKTSDKASNTTSEAPSPSADKANSTA-SPTASPTASPKANSTDSKNSTKSSSPSPSP---KA

Query:  SSPSSSSKAPSAESPAASTPKS-SPSGSPSTSPSSSPASDSPANSPAADSPSADSPASDSPAGSPADSPA-ASSPGSDASSPPS--PDAADGPAADGPAS
         +P+ +     A++PAAS+  S SP+ S  TSPS +PAS+SP +SP +    + SP +DSPA SPADS + A+SP SD+SSPPS  PDAAD P ADGP+ 
Subjt:  SSPSSSSKAPSAESPAASTPKS-SPSGSPSTSPSSSPASDSPANSPAADSPSADSPASDSPAGSPADSPA-ASSPGSDASSPPS--PDAADGPAADGPAS

Query:  ADGPATADGPAAADGPSATDSEPAGAAALKFTTATF--AASVVIAGMFAF
         DGP T+D PA A    A     +G ++LK T+A    A +V +AG+FAF
Subjt:  ADGPATADGPAAADGPSATDSEPAGAAALKFTTATF--AASVVIAGMFAF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTTCTCAATCCCTCCTTGTTCTTGCTCTTATCCTCGTCGTTGCGGTGGTCGGAGTCTACTCCGAGGCTCCGACCACTTCCCCTTCCGCGTCACCCGAAAAAGCTTC
CAATAAAACTTCTGATAAAGCTTCCAATACAACTTCTGAAGCACCCTCCCCATCCGCTGACAAGGCTAACTCAACTGCCTCTCCTACTGCTTCTCCAACTGCCTCTCCCA
AGGCTAACTCGACGGATTCAAAGAATTCAACGAAGTCGTCGTCTCCATCACCGTCCCCGAAAGCCTCGTCTCCATCCTCGTCTTCCAAGGCTCCATCGGCCGAGTCGCCC
GCTGCTAGCACCCCGAAGTCCTCTCCTTCCGGTTCTCCTTCCACTTCTCCTTCTAGTTCTCCAGCATCCGACTCCCCAGCTAACTCCCCGGCTGCCGACTCCCCATCTGC
CGACTCCCCGGCTTCCGACTCTCCTGCTGGCTCCCCGGCTGACTCCCCGGCGGCTAGCTCACCTGGTTCCGACGCCTCTTCTCCCCCCTCTCCCGATGCAGCTGATGGCC
CCGCTGCTGATGGCCCGGCCTCTGCAGATGGCCCGGCCACGGCTGACGGCCCGGCCGCTGCTGATGGCCCTTCCGCCACTGATTCTGAACCGGCGGGTGCTGCCGCTCTG
AAATTCACCACCGCCACATTTGCTGCCTCCGTCGTTATTGCCGGAATGTTTGCATTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGACTTCTCAATCCCTCCTTGTTCTTGCTCTTATCCTCGTCGTTGCGGTGGTCGGAGTCTACTCCGAGGCTCCGACCACTTCCCCTTCCGCGTCACCCGAAAAAGCTTC
CAATAAAACTTCTGATAAAGCTTCCAATACAACTTCTGAAGCACCCTCCCCATCCGCTGACAAGGCTAACTCAACTGCCTCTCCTACTGCTTCTCCAACTGCCTCTCCCA
AGGCTAACTCGACGGATTCAAAGAATTCAACGAAGTCGTCGTCTCCATCACCGTCCCCGAAAGCCTCGTCTCCATCCTCGTCTTCCAAGGCTCCATCGGCCGAGTCGCCC
GCTGCTAGCACCCCGAAGTCCTCTCCTTCCGGTTCTCCTTCCACTTCTCCTTCTAGTTCTCCAGCATCCGACTCCCCAGCTAACTCCCCGGCTGCCGACTCCCCATCTGC
CGACTCCCCGGCTTCCGACTCTCCTGCTGGCTCCCCGGCTGACTCCCCGGCGGCTAGCTCACCTGGTTCCGACGCCTCTTCTCCCCCCTCTCCCGATGCAGCTGATGGCC
CCGCTGCTGATGGCCCGGCCTCTGCAGATGGCCCGGCCACGGCTGACGGCCCGGCCGCTGCTGATGGCCCTTCCGCCACTGATTCTGAACCGGCGGGTGCTGCCGCTCTG
AAATTCACCACCGCCACATTTGCTGCCTCCGTCGTTATTGCCGGAATGTTTGCATTCTGA
Protein sequenceShow/hide protein sequence
MTSQSLLVLALILVVAVVGVYSEAPTTSPSASPEKASNKTSDKASNTTSEAPSPSADKANSTASPTASPTASPKANSTDSKNSTKSSSPSPSPKASSPSSSSKAPSAESP
AASTPKSSPSGSPSTSPSSSPASDSPANSPAADSPSADSPASDSPAGSPADSPAASSPGSDASSPPSPDAADGPAADGPASADGPATADGPAAADGPSATDSEPAGAAAL
KFTTATFAASVVIAGMFAF