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Sed0011598 (gene) of Chayote v1 genome

Gene IDSed0011598
OrganismSechium edule (Chayote v1)
Description60S ribosomal protein L22-2-like
Genome locationLG04:47627922..47634588
RNA-Seq ExpressionSed0011598
SyntenySed0011598
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR002671 - Ribosomal protein L22e
IPR038526 - Ribosomal protein L22e superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588488.1 60S ribosomal protein L22-2, partial [Cucurbita argyrosperma subsp. sororia]3.6e-5895.97Show/hide
Query:  MSRGGAGGPKGKKKGVSFTVDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDTNFSKRYLKYLTKKYLKKHNVRDWLRVIA
        MSRGGA GPKGKKKGV+FT+DC+KPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSD+NFSKRYLKYLTKKYLKKHNVRDWLRVIA
Subjt:  MSRGGAGGPKGKKKGVSFTVDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDTNFSKRYLKYLTKKYLKKHNVRDWLRVIA

Query:  ANKDRNVYELRYFNIAENEGEEED
        ANKDRNVYELRYFNIAENEGEEED
Subjt:  ANKDRNVYELRYFNIAENEGEEED

KAG6590443.1 60S ribosomal protein L22-2, partial [Cucurbita argyrosperma subsp. sororia]1.2e-5896.77Show/hide
Query:  MSRGGAGGPKGKKKGVSFTVDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDTNFSKRYLKYLTKKYLKKHNVRDWLRVIA
        MSRGGA GPKGKKKGV+FT+DCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSD+NFSKRYLKYLTKKYLKKHNVRDWLRVIA
Subjt:  MSRGGAGGPKGKKKGVSFTVDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDTNFSKRYLKYLTKKYLKKHNVRDWLRVIA

Query:  ANKDRNVYELRYFNIAENEGEEED
        ANKDRNVYELRYFNIAENEGEEED
Subjt:  ANKDRNVYELRYFNIAENEGEEED

XP_004135607.1 60S ribosomal protein L22-2 [Cucumis sativus]8.0e-5895.16Show/hide
Query:  MSRGGAGGPKGKKKGVSFTVDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDTNFSKRYLKYLTKKYLKKHNVRDWLRVIA
        MSRGGA GPKGKKKGV+FT+DC+KPVEDKIMDIASLEKFLLERIKVGGKAGALGD+VSVTREKSKITVTSD+NFSKRYLKYLTKKYLKKHNVRDWLRVIA
Subjt:  MSRGGAGGPKGKKKGVSFTVDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDTNFSKRYLKYLTKKYLKKHNVRDWLRVIA

Query:  ANKDRNVYELRYFNIAENEGEEED
        ANKDRNVYELRYFNIAENEGEEED
Subjt:  ANKDRNVYELRYFNIAENEGEEED

XP_022146066.1 60S ribosomal protein L22-2 [Momordica charantia]3.6e-5895.97Show/hide
Query:  MSRGGAGGPKGKKKGVSFTVDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDTNFSKRYLKYLTKKYLKKHNVRDWLRVIA
        MSRGGA GPKGKKKGV+FT+DC+KPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSD+NFSKRYLKYLTKKYLKKHNVRDWLRVIA
Subjt:  MSRGGAGGPKGKKKGVSFTVDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDTNFSKRYLKYLTKKYLKKHNVRDWLRVIA

Query:  ANKDRNVYELRYFNIAENEGEEED
        ANKDRNVYELRYFNIAENEGEEED
Subjt:  ANKDRNVYELRYFNIAENEGEEED

XP_022961443.1 60S ribosomal protein L22-2-like [Cucurbita moschata]1.2e-5896.77Show/hide
Query:  MSRGGAGGPKGKKKGVSFTVDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDTNFSKRYLKYLTKKYLKKHNVRDWLRVIA
        MSRGGA GPKGKKKGV+FT+DCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSD+NFSKRYLKYLTKKYLKKHNVRDWLRVIA
Subjt:  MSRGGAGGPKGKKKGVSFTVDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDTNFSKRYLKYLTKKYLKKHNVRDWLRVIA

Query:  ANKDRNVYELRYFNIAENEGEEED
        ANKDRNVYELRYFNIAENEGEEED
Subjt:  ANKDRNVYELRYFNIAENEGEEED

TrEMBL top hitse value%identityAlignment
A0A6J1CY92 60S ribosomal protein L22-21.7e-5895.97Show/hide
Query:  MSRGGAGGPKGKKKGVSFTVDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDTNFSKRYLKYLTKKYLKKHNVRDWLRVIA
        MSRGGA GPKGKKKGV+FT+DC+KPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSD+NFSKRYLKYLTKKYLKKHNVRDWLRVIA
Subjt:  MSRGGAGGPKGKKKGVSFTVDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDTNFSKRYLKYLTKKYLKKHNVRDWLRVIA

Query:  ANKDRNVYELRYFNIAENEGEEED
        ANKDRNVYELRYFNIAENEGEEED
Subjt:  ANKDRNVYELRYFNIAENEGEEED

A0A6J1F0W8 60S ribosomal protein L22-21.7e-5895.97Show/hide
Query:  MSRGGAGGPKGKKKGVSFTVDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDTNFSKRYLKYLTKKYLKKHNVRDWLRVIA
        MSRGGA GPKGKKKGV+FT+DC+KPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSD+NFSKRYLKYLTKKYLKKHNVRDWLRVIA
Subjt:  MSRGGAGGPKGKKKGVSFTVDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDTNFSKRYLKYLTKKYLKKHNVRDWLRVIA

Query:  ANKDRNVYELRYFNIAENEGEEED
        ANKDRNVYELRYFNIAENEGEEED
Subjt:  ANKDRNVYELRYFNIAENEGEEED

A0A6J1HBU5 60S ribosomal protein L22-2-like6.0e-5996.77Show/hide
Query:  MSRGGAGGPKGKKKGVSFTVDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDTNFSKRYLKYLTKKYLKKHNVRDWLRVIA
        MSRGGA GPKGKKKGV+FT+DCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSD+NFSKRYLKYLTKKYLKKHNVRDWLRVIA
Subjt:  MSRGGAGGPKGKKKGVSFTVDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDTNFSKRYLKYLTKKYLKKHNVRDWLRVIA

Query:  ANKDRNVYELRYFNIAENEGEEED
        ANKDRNVYELRYFNIAENEGEEED
Subjt:  ANKDRNVYELRYFNIAENEGEEED

A0A6J1HVX5 60S ribosomal protein L22-2-like6.0e-5996.77Show/hide
Query:  MSRGGAGGPKGKKKGVSFTVDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDTNFSKRYLKYLTKKYLKKHNVRDWLRVIA
        MSRGGA GPKGKKKGV+FT+DCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSD+NFSKRYLKYLTKKYLKKHNVRDWLRVIA
Subjt:  MSRGGAGGPKGKKKGVSFTVDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDTNFSKRYLKYLTKKYLKKHNVRDWLRVIA

Query:  ANKDRNVYELRYFNIAENEGEEED
        ANKDRNVYELRYFNIAENEGEEED
Subjt:  ANKDRNVYELRYFNIAENEGEEED

A0A6J1I4P7 60S ribosomal protein L22-21.7e-5895.97Show/hide
Query:  MSRGGAGGPKGKKKGVSFTVDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDTNFSKRYLKYLTKKYLKKHNVRDWLRVIA
        MSRGGA GPKGKKKGV+FT+DC+KPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSD+NFSKRYLKYLTKKYLKKHNVRDWLRVIA
Subjt:  MSRGGAGGPKGKKKGVSFTVDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDTNFSKRYLKYLTKKYLKKHNVRDWLRVIA

Query:  ANKDRNVYELRYFNIAENEGEEED
        ANKDRNVYELRYFNIAENEGEEED
Subjt:  ANKDRNVYELRYFNIAENEGEEED

SwissProt top hitse value%identityAlignment
Q4R5I3 60S ribosomal protein L222.4e-3365.83Show/hide
Query:  AGGPKGKKKGVSFTVDCTKPVEDKIMDIASLEKFLLERIKVGGKAGAL-GDAVSVTREKSKITVTSDTNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKD
        A G K KK+ + FT+DCT PVED IMD A+ E+FL ERIKV GKAG L G  V++ R KSKITVTS+  FSKRYLKYLTKKYLKK+N+RDWLRV+A +K+
Subjt:  AGGPKGKKKGVSFTVDCTKPVEDKIMDIASLEKFLLERIKVGGKAGAL-GDAVSVTREKSKITVTSDTNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKD

Query:  RNVYELRYFNIAENEGEEED
           YELRYF I ++E EEED
Subjt:  RNVYELRYFNIAENEGEEED

Q90YU6 60S ribosomal protein L228.4e-3467.8Show/hide
Query:  GPKGKKKGVSFTVDCTKPVEDKIMDIASLEKFLLERIKVGGKAGAL-GDAVSVTREKSKITVTSDTNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRN
        G K KK+ + FT+DCT PVED IMD A+ E+FL ERIKV GKAG L G  VS+ R KSKITVTSD  FSKRYLKYLTKKYLKK+N+RDWLRV+A  K+  
Subjt:  GPKGKKKGVSFTVDCTKPVEDKIMDIASLEKFLLERIKVGGKAGAL-GDAVSVTREKSKITVTSDTNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRN

Query:  VYELRYFNIAENEGEEED
         YELRYF I ++E EEED
Subjt:  VYELRYFNIAENEGEEED

Q9FE58 60S ribosomal protein L22-31.1e-5487.1Show/hide
Query:  MSRGGAGGPKGKKKGVSFTVDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDTNFSKRYLKYLTKKYLKKHNVRDWLRVIA
        MSRG A   KGKKKGVSFT+DC+KPV+DKIM+IASLEKFL ERIKVGGKAGALGD+VS+TREKSKITVT+D  FSKRYLKYLTKKYLKKHNVRDWLRVIA
Subjt:  MSRGGAGGPKGKKKGVSFTVDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDTNFSKRYLKYLTKKYLKKHNVRDWLRVIA

Query:  ANKDRNVYELRYFNIAENEGEEED
        ANKDRN+YELRYFNIAENE EEED
Subjt:  ANKDRNVYELRYFNIAENEGEEED

Q9M9W1 60S ribosomal protein L22-22.3e-5587.9Show/hide
Query:  MSRGGAGGPKGKKKGVSFTVDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDTNFSKRYLKYLTKKYLKKHNVRDWLRVIA
        MSRGGA   KGKKKGVSFT+DC+KPV+DKIM+IASLEKFL ERIKVGGKAGALGD+V++TREKSKITVT+D  FSKRYLKYLTKKYLKKHNVRDWLRVIA
Subjt:  MSRGGAGGPKGKKKGVSFTVDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDTNFSKRYLKYLTKKYLKKHNVRDWLRVIA

Query:  ANKDRNVYELRYFNIAENEGEEED
        ANKDRN+YELRYFNIAENEGEEED
Subjt:  ANKDRNVYELRYFNIAENEGEEED

Q9SRX7 Putative 60S ribosomal protein L22-18.7e-3965.87Show/hide
Query:  MSRGGA--GGPKGKKKGVSFTVDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDTNFSKRYLKYLTKKYLKKHNVRDWLRV
        M+R GA   G   KKKGVSF +DC+KPV+D I++IA+LEKFL ERIKV GKAGALG++VS+TR   KI V +++NFSKRYLKYLTKKYLKK+N+RDWLRV
Subjt:  MSRGGA--GGPKGKKKGVSFTVDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDTNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IAANKDRNVYELRYFNIAENEGEEED
        IA+NKD+NVYE+RYF I +     E+
Subjt:  IAANKDRNVYELRYFNIAENEGEEED

Arabidopsis top hitse value%identityAlignment
AT1G02830.1 Ribosomal L22e protein family6.1e-4065.87Show/hide
Query:  MSRGGA--GGPKGKKKGVSFTVDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDTNFSKRYLKYLTKKYLKKHNVRDWLRV
        M+R GA   G   KKKGVSF +DC+KPV+D I++IA+LEKFL ERIKV GKAGALG++VS+TR   KI V +++NFSKRYLKYLTKKYLKK+N+RDWLRV
Subjt:  MSRGGA--GGPKGKKKGVSFTVDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDTNFSKRYLKYLTKKYLKKHNVRDWLRV

Query:  IAANKDRNVYELRYFNIAENEGEEED
        IA+NKD+NVYE+RYF I +     E+
Subjt:  IAANKDRNVYELRYFNIAENEGEEED

AT3G05560.1 Ribosomal L22e protein family1.6e-5687.9Show/hide
Query:  MSRGGAGGPKGKKKGVSFTVDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDTNFSKRYLKYLTKKYLKKHNVRDWLRVIA
        MSRGGA   KGKKKGVSFT+DC+KPV+DKIM+IASLEKFL ERIKVGGKAGALGD+V++TREKSKITVT+D  FSKRYLKYLTKKYLKKHNVRDWLRVIA
Subjt:  MSRGGAGGPKGKKKGVSFTVDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDTNFSKRYLKYLTKKYLKKHNVRDWLRVIA

Query:  ANKDRNVYELRYFNIAENEGEEED
        ANKDRN+YELRYFNIAENEGEEED
Subjt:  ANKDRNVYELRYFNIAENEGEEED

AT3G05560.2 Ribosomal L22e protein family1.6e-5687.9Show/hide
Query:  MSRGGAGGPKGKKKGVSFTVDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDTNFSKRYLKYLTKKYLKKHNVRDWLRVIA
        MSRGGA   KGKKKGVSFT+DC+KPV+DKIM+IASLEKFL ERIKVGGKAGALGD+V++TREKSKITVT+D  FSKRYLKYLTKKYLKKHNVRDWLRVIA
Subjt:  MSRGGAGGPKGKKKGVSFTVDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDTNFSKRYLKYLTKKYLKKHNVRDWLRVIA

Query:  ANKDRNVYELRYFNIAENEGEEED
        ANKDRN+YELRYFNIAENEGEEED
Subjt:  ANKDRNVYELRYFNIAENEGEEED

AT3G05560.3 Ribosomal L22e protein family1.6e-5687.9Show/hide
Query:  MSRGGAGGPKGKKKGVSFTVDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDTNFSKRYLKYLTKKYLKKHNVRDWLRVIA
        MSRGGA   KGKKKGVSFT+DC+KPV+DKIM+IASLEKFL ERIKVGGKAGALGD+V++TREKSKITVT+D  FSKRYLKYLTKKYLKKHNVRDWLRVIA
Subjt:  MSRGGAGGPKGKKKGVSFTVDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDTNFSKRYLKYLTKKYLKKHNVRDWLRVIA

Query:  ANKDRNVYELRYFNIAENEGEEED
        ANKDRN+YELRYFNIAENEGEEED
Subjt:  ANKDRNVYELRYFNIAENEGEEED

AT5G27770.1 Ribosomal L22e protein family8.0e-5687.1Show/hide
Query:  MSRGGAGGPKGKKKGVSFTVDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDTNFSKRYLKYLTKKYLKKHNVRDWLRVIA
        MSRG A   KGKKKGVSFT+DC+KPV+DKIM+IASLEKFL ERIKVGGKAGALGD+VS+TREKSKITVT+D  FSKRYLKYLTKKYLKKHNVRDWLRVIA
Subjt:  MSRGGAGGPKGKKKGVSFTVDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDTNFSKRYLKYLTKKYLKKHNVRDWLRVIA

Query:  ANKDRNVYELRYFNIAENEGEEED
        ANKDRN+YELRYFNIAENE EEED
Subjt:  ANKDRNVYELRYFNIAENEGEEED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTCGAGGAGGTGCAGGCGGGCCGAAGGGGAAGAAGAAGGGAGTGAGCTTCACAGTCGACTGTACGAAGCCGGTGGAAGATAAGATTATGGACATTGCTTCTCTCGA
GAAGTTTCTTCTGGAGAGGATCAAAGTCGGAGGCAAGGCTGGAGCTCTTGGCGATGCCGTCTCCGTTACTCGTGAAAAGAGTAAAATTACTGTCACTTCCGACACCAATT
TCTCCAAGAGGTATTTGAAGTACTTGACTAAGAAGTACCTGAAGAAACATAATGTGCGGGATTGGCTACGAGTTATTGCTGCCAACAAAGATAGAAATGTTTATGAACTC
AGGTACTTCAACATTGCCGAGAATGAAGGAGAGGAAGAGGATTAA
mRNA sequenceShow/hide mRNA sequence
GTGGTTGTCCGTATATAAAGTGAAAGCGGAGCTAATTTAGGGTTACACTGGGCGGCGTCTGAATCCTCGAGTGTTTCTGCAGCAACTGAGATTTTTGATCGAAAATGAGT
CGAGGAGGTGCAGGCGGGCCGAAGGGGAAGAAGAAGGGAGTGAGCTTCACAGTCGACTGTACGAAGCCGGTGGAAGATAAGATTATGGACATTGCTTCTCTCGAGAAGTT
TCTTCTGGAGAGGATCAAAGTCGGAGGCAAGGCTGGAGCTCTTGGCGATGCCGTCTCCGTTACTCGTGAAAAGAGTAAAATTACTGTCACTTCCGACACCAATTTCTCCA
AGAGGTATTTGAAGTACTTGACTAAGAAGTACCTGAAGAAACATAATGTGCGGGATTGGCTACGAGTTATTGCTGCCAACAAAGATAGAAATGTTTATGAACTCAGGTAC
TTCAACATTGCCGAGAATGAAGGAGAGGAAGAGGATTAAGTTTATAAATTTAGACATTGCATTCAAGGAACAACGGATAGCTTGAATCTCTCTTTTTTTGTTTGTAGTGT
TGCTTGTGTGATGCTCTGTTTTTTAACTAATGCAGTTTAGCAATTTTGTTTTCTTTGACAGACTAAGATTGCCCTTATTTTTTGTGTCATATTTGATTAAGACCTACAAA
TTTTCACTATCAAGCAATGTCTCTCATATTCTTATGGAATCTAGGTGGATGAAATTATTTATATTTGACCAAGATTTTGAATTCGCATTGTTATCCTGTTAGGAAGTACT
TTTCTGGATGAAGTTTAC
Protein sequenceShow/hide protein sequence
MSRGGAGGPKGKKKGVSFTVDCTKPVEDKIMDIASLEKFLLERIKVGGKAGALGDAVSVTREKSKITVTSDTNFSKRYLKYLTKKYLKKHNVRDWLRVIAANKDRNVYEL
RYFNIAENEGEEED