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Sed0011608 (gene) of Chayote v1 genome

Gene IDSed0011608
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG11:1631056..1631975
RNA-Seq ExpressionSed0011608
SyntenySed0011608
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586348.1 Ubiquitin-like domain-containing protein CIP73, partial [Cucurbita argyrosperma subsp. sororia]9.6e-0959.72Show/hide
Query:  MAILLLLLIISKAQGIRLLEKELNKEYKENVAVLGGKNGGDLLVSMK----RKALRKLPSSHWLPGFQEDYH
        MA+LLL LIIS+A+GIRLL+K ++KE K        +NGGDLL +MK     KA RK P SHWLPG QEDYH
Subjt:  MAILLLLLIISKAQGIRLLEKELNKEYKENVAVLGGKNGGDLLVSMK----RKALRKLPSSHWLPGFQEDYH
TrEMBL top hitse value%identityAlignment
A0A0A0LJ48 Uncharacterized protein6.1e-1765.06Show/hide
Query:  MAILLL-LLIISKAQGIRLLEKELNKEYKENVAVLGGKNGGDLLVSMKR----KALRKLPSSHWLPGFQEDYHGPRSHNSRHH
        MA+LLL L+I+ +AQGIRLLEK ++KEYK++   L  KNGGD L++MK+    +ALRK P SHWLPG QEDYHGPRSH SRHH
Subjt:  MAILLL-LLIISKAQGIRLLEKELNKEYKENVAVLGGKNGGDLLVSMKR----KALRKLPSSHWLPGFQEDYHGPRSHNSRHH
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGATTCTTCTTCTTTTACTTATCATCTCCAAAGCTCAAGGTATTAGATTGTTGGAGAAAGAATTAAACAAAGAGTACAAGGAAAATGTAGCTGTTTTGGGGGGTAA
AAATGGAGGAGATTTGTTGGTGAGCATGAAGAGAAAAGCCTTAAGAAAATTACCCTCTTCTCATTGGCTACCAGGCTTCCAAGAAGATTACCATGGTCCAAGAAGTCATA
ATTCTAGGCACCATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGATTCTTCTTCTTTTACTTATCATCTCCAAAGCTCAAGGTATTAGATTGTTGGAGAAAGAATTAAACAAAGAGTACAAGGAAAATGTAGCTGTTTTGGGGGGTAA
AAATGGAGGAGATTTGTTGGTGAGCATGAAGAGAAAAGCCTTAAGAAAATTACCCTCTTCTCATTGGCTACCAGGCTTCCAAGAAGATTACCATGGTCCAAGAAGTCATA
ATTCTAGGCACCATTAG
Protein sequenceShow/hide protein sequence
MAILLLLLIISKAQGIRLLEKELNKEYKENVAVLGGKNGGDLLVSMKRKALRKLPSSHWLPGFQEDYHGPRSHNSRHH