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Sed0011609 (gene) of Chayote v1 genome

Gene IDSed0011609
OrganismSechium edule (Chayote v1)
DescriptionTransmembrane protein
Genome locationLG14:24801959..24805120
RNA-Seq ExpressionSed0011609
SyntenySed0011609
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7026389.1 hypothetical protein SDJN02_10389 [Cucurbita argyrosperma subsp. argyrosperma]6.6e-7886.63Show/hide
Query:  MSAIMLSCCNPRLGCNYGGMDPRRIAFGHLRAIGRRNHGYQKLTVFALTEGSAKSSDSEETIPSWAKPDSEEPPPWARNEGKEAGSSLGFQVPFYVYLLA
        MSA +LS CNPRL CN G M+  R AFG LR IGRR++GY+KLTVF++TEGSAKSS+SEETIPSWAKPDSEEPPPWAR EGKE GS LGFQVPFYVYLLA
Subjt:  MSAIMLSCCNPRLGCNYGGMDPRRIAFGHLRAIGRRNHGYQKLTVFALTEGSAKSSDSEETIPSWAKPDSEEPPPWARNEGKEAGSSLGFQVPFYVYLLA

Query:  SSITAIAAIGSVFEYVNQKPVFGIINSDSIFYAPILGFFAFTGIPTAAFLWFKSVEVANKEAEDQDRRDGYL
        SSITAIAAIGSVFEYVNQKPVFGIINSDSIFYAP+LGFFAFTGIPTA FLWFKSVEVANKEAEDQDRRDGYL
Subjt:  SSITAIAAIGSVFEYVNQKPVFGIINSDSIFYAPILGFFAFTGIPTAAFLWFKSVEVANKEAEDQDRRDGYL

XP_022926368.1 uncharacterized protein LOC111433537 [Cucurbita moschata]2.3e-7886.63Show/hide
Query:  MSAIMLSCCNPRLGCNYGGMDPRRIAFGHLRAIGRRNHGYQKLTVFALTEGSAKSSDSEETIPSWAKPDSEEPPPWARNEGKEAGSSLGFQVPFYVYLLA
        MSA +LS CNPRL CNYG M+  R AF HLR IGRR++GY+KLTVF++TEGSAKSS+SEETIPSWAKPDSEEPPPW R EGKE GS LGFQVPFYVYLLA
Subjt:  MSAIMLSCCNPRLGCNYGGMDPRRIAFGHLRAIGRRNHGYQKLTVFALTEGSAKSSDSEETIPSWAKPDSEEPPPWARNEGKEAGSSLGFQVPFYVYLLA

Query:  SSITAIAAIGSVFEYVNQKPVFGIINSDSIFYAPILGFFAFTGIPTAAFLWFKSVEVANKEAEDQDRRDGYL
        SSITAIAAIGSVFEYVNQKPVFGIINSDSIFYAP+LGFFAFTGIPTA FLWFKSVEVANKEAEDQDRRDGYL
Subjt:  SSITAIAAIGSVFEYVNQKPVFGIINSDSIFYAPILGFFAFTGIPTAAFLWFKSVEVANKEAEDQDRRDGYL

XP_023003848.1 uncharacterized protein LOC111497315 [Cucurbita maxima]1.7e-7887.21Show/hide
Query:  MSAIMLSCCNPRLGCNYGGMDPRRIAFGHLRAIGRRNHGYQKLTVFALTEGSAKSSDSEETIPSWAKPDSEEPPPWARNEGKEAGSSLGFQVPFYVYLLA
        MSA +LS CNPRL CNYG M+  R AFGHLR IGRR +GY+KLTVF++TEGSAKSS+SEETIPSWAKPDSEEPPPWAR E KE GS LGFQVPFYVYLLA
Subjt:  MSAIMLSCCNPRLGCNYGGMDPRRIAFGHLRAIGRRNHGYQKLTVFALTEGSAKSSDSEETIPSWAKPDSEEPPPWARNEGKEAGSSLGFQVPFYVYLLA

Query:  SSITAIAAIGSVFEYVNQKPVFGIINSDSIFYAPILGFFAFTGIPTAAFLWFKSVEVANKEAEDQDRRDGYL
        SSITAIAAIGSVFEYVNQKPVFGIINSDSIFYAP+LGFFAFTGIPTA FLWFKSVEVANKEAEDQDRRDGYL
Subjt:  SSITAIAAIGSVFEYVNQKPVFGIINSDSIFYAPILGFFAFTGIPTAAFLWFKSVEVANKEAEDQDRRDGYL

XP_023518065.1 uncharacterized protein LOC111781610 [Cucurbita pepo subsp. pepo]5.4e-8087.79Show/hide
Query:  MSAIMLSCCNPRLGCNYGGMDPRRIAFGHLRAIGRRNHGYQKLTVFALTEGSAKSSDSEETIPSWAKPDSEEPPPWARNEGKEAGSSLGFQVPFYVYLLA
        MSA +LS CNPRL CNYG M+  R AFGHLR IGRR++GY+KLTVF++TEGSAKSS+SEETIPSWAKPDSEEPPPWAR EGKE GS LGFQVPFYVYLLA
Subjt:  MSAIMLSCCNPRLGCNYGGMDPRRIAFGHLRAIGRRNHGYQKLTVFALTEGSAKSSDSEETIPSWAKPDSEEPPPWARNEGKEAGSSLGFQVPFYVYLLA

Query:  SSITAIAAIGSVFEYVNQKPVFGIINSDSIFYAPILGFFAFTGIPTAAFLWFKSVEVANKEAEDQDRRDGYL
        SSITAIAAIGSVFEYVNQKPVFGIINSDSIFYAP+LGFFAFTGIPTA FLWFKSVEVANKEAEDQDRRDGYL
Subjt:  SSITAIAAIGSVFEYVNQKPVFGIINSDSIFYAPILGFFAFTGIPTAAFLWFKSVEVANKEAEDQDRRDGYL

XP_038881100.1 uncharacterized protein LOC120072709 isoform X2 [Benincasa hispida]7.8e-7986.63Show/hide
Query:  MSAIMLSCCNPRLGCNYGGMDPRRIAFGHLRAIGRRNHGYQKLTVFALTEGSAKSSDSEETIPSWAKPDSEEPPPWARNEGKEAGSSLGFQVPFYVYLLA
        MSA +LS CNP L CNYG MD + +AFGHLR+IG RN+GY+KLTVFA+TEGSAKSS+SEETIPSWAKPDSEEPPPWAR EGKE G+  GFQVPFYVYLLA
Subjt:  MSAIMLSCCNPRLGCNYGGMDPRRIAFGHLRAIGRRNHGYQKLTVFALTEGSAKSSDSEETIPSWAKPDSEEPPPWARNEGKEAGSSLGFQVPFYVYLLA

Query:  SSITAIAAIGSVFEYVNQKPVFGIINSDSIFYAPILGFFAFTGIPTAAFLWFKSVEVANKEAEDQDRRDGYL
        SSITAIAAIGSVFEYVNQKPVFGIINSDSI YAP+LGFFAFTGIPTAAFLWFKSVEVANKEAEDQDRRDGYL
Subjt:  SSITAIAAIGSVFEYVNQKPVFGIINSDSIFYAPILGFFAFTGIPTAAFLWFKSVEVANKEAEDQDRRDGYL

TrEMBL top hitse value%identityAlignment
A0A1S4DTF9 uncharacterized protein LOC1034842547.1e-7882.58Show/hide
Query:  EQQLGAMSAIMLSCCNPRLGCNYGGMDPRRIAFGHLRAIGRRNHGYQKLTVFALTEGSAKSSDSEETIPSWAKPDSEEPPPWARNEGKEAGSSLGFQVPF
        +++LG MSA +LS CNP L CNY  MD +R+A GHLR+IGRRN+G++KLTVFA+TEGSAKSS+SEETIPSWAK DSEEPPPWA+ E KE G+  GFQVPF
Subjt:  EQQLGAMSAIMLSCCNPRLGCNYGGMDPRRIAFGHLRAIGRRNHGYQKLTVFALTEGSAKSSDSEETIPSWAKPDSEEPPPWARNEGKEAGSSLGFQVPF

Query:  YVYLLASSITAIAAIGSVFEYVNQKPVFGIINSDSIFYAPILGFFAFTGIPTAAFLWFKSVEVANKEAEDQDRRDGYL
        YVYLLASSITAIAAIGSVFEYVNQKPVFGIINSDSI YAP+LGFFAFTGIPTAAFLWFKSVEVANKEAEDQDRRDGYL
Subjt:  YVYLLASSITAIAAIGSVFEYVNQKPVFGIINSDSIFYAPILGFFAFTGIPTAAFLWFKSVEVANKEAEDQDRRDGYL

A0A6J1EDF6 uncharacterized protein LOC1114333013.5e-7786.55Show/hide
Query:  MSAIMLSCCNPRLGCNYGGMDPRRIAFGHLRAIGRRNHGYQKLTVFALTEGSAKSSDSEETIPSWAKPDSEEPPPWARNEGKEAGSSLGFQVPFYVYLLA
        MSA +LS  NP L CNYG MD +RIAFG LR+IGRRN+G++ LTVFA TEGSAKSS+SEETIPSWAKPDSEEPPPWAR EGKE G+  GFQVPFYVYLLA
Subjt:  MSAIMLSCCNPRLGCNYGGMDPRRIAFGHLRAIGRRNHGYQKLTVFALTEGSAKSSDSEETIPSWAKPDSEEPPPWARNEGKEAGSSLGFQVPFYVYLLA

Query:  SSITAIAAIGSVFEYVNQKPVFGIINSDSIFYAPILGFFAFTGIPTAAFLWFKSVEVANKEAEDQDRRDGY
        SSITAIAAIGSVFEYVNQKPVFGIINSDSIFYAP+LGFFAFTGIPTAAFLWFKSVEVANKEAEDQDRRDGY
Subjt:  SSITAIAAIGSVFEYVNQKPVFGIINSDSIFYAPILGFFAFTGIPTAAFLWFKSVEVANKEAEDQDRRDGY

A0A6J1EER1 uncharacterized protein LOC1114335371.1e-7886.63Show/hide
Query:  MSAIMLSCCNPRLGCNYGGMDPRRIAFGHLRAIGRRNHGYQKLTVFALTEGSAKSSDSEETIPSWAKPDSEEPPPWARNEGKEAGSSLGFQVPFYVYLLA
        MSA +LS CNPRL CNYG M+  R AF HLR IGRR++GY+KLTVF++TEGSAKSS+SEETIPSWAKPDSEEPPPW R EGKE GS LGFQVPFYVYLLA
Subjt:  MSAIMLSCCNPRLGCNYGGMDPRRIAFGHLRAIGRRNHGYQKLTVFALTEGSAKSSDSEETIPSWAKPDSEEPPPWARNEGKEAGSSLGFQVPFYVYLLA

Query:  SSITAIAAIGSVFEYVNQKPVFGIINSDSIFYAPILGFFAFTGIPTAAFLWFKSVEVANKEAEDQDRRDGYL
        SSITAIAAIGSVFEYVNQKPVFGIINSDSIFYAP+LGFFAFTGIPTA FLWFKSVEVANKEAEDQDRRDGYL
Subjt:  SSITAIAAIGSVFEYVNQKPVFGIINSDSIFYAPILGFFAFTGIPTAAFLWFKSVEVANKEAEDQDRRDGYL

A0A6J1IIG9 uncharacterized protein LOC1114777934.6e-7786.55Show/hide
Query:  MSAIMLSCCNPRLGCNYGGMDPRRIAFGHLRAIGRRNHGYQKLTVFALTEGSAKSSDSEETIPSWAKPDSEEPPPWARNEGKEAGSSLGFQVPFYVYLLA
        MSA +LS  NP L CNYG MD  RIAFG LR+IGRRN+G++ LTVFA TEGSAKSS+SEETIPSWAKPDSEEPPPWAR EGKE G+  GFQVPFYVYLLA
Subjt:  MSAIMLSCCNPRLGCNYGGMDPRRIAFGHLRAIGRRNHGYQKLTVFALTEGSAKSSDSEETIPSWAKPDSEEPPPWARNEGKEAGSSLGFQVPFYVYLLA

Query:  SSITAIAAIGSVFEYVNQKPVFGIINSDSIFYAPILGFFAFTGIPTAAFLWFKSVEVANKEAEDQDRRDGY
        SSITAIAAIGSVFEYVNQKPVFGIINSDSIFYAP+LGFFAFTGIPTAAFLWFKSVEVANKEAEDQDRRDGY
Subjt:  SSITAIAAIGSVFEYVNQKPVFGIINSDSIFYAPILGFFAFTGIPTAAFLWFKSVEVANKEAEDQDRRDGY

A0A6J1KQE7 uncharacterized protein LOC1114973158.4e-7987.21Show/hide
Query:  MSAIMLSCCNPRLGCNYGGMDPRRIAFGHLRAIGRRNHGYQKLTVFALTEGSAKSSDSEETIPSWAKPDSEEPPPWARNEGKEAGSSLGFQVPFYVYLLA
        MSA +LS CNPRL CNYG M+  R AFGHLR IGRR +GY+KLTVF++TEGSAKSS+SEETIPSWAKPDSEEPPPWAR E KE GS LGFQVPFYVYLLA
Subjt:  MSAIMLSCCNPRLGCNYGGMDPRRIAFGHLRAIGRRNHGYQKLTVFALTEGSAKSSDSEETIPSWAKPDSEEPPPWARNEGKEAGSSLGFQVPFYVYLLA

Query:  SSITAIAAIGSVFEYVNQKPVFGIINSDSIFYAPILGFFAFTGIPTAAFLWFKSVEVANKEAEDQDRRDGYL
        SSITAIAAIGSVFEYVNQKPVFGIINSDSIFYAP+LGFFAFTGIPTA FLWFKSVEVANKEAEDQDRRDGYL
Subjt:  SSITAIAAIGSVFEYVNQKPVFGIINSDSIFYAPILGFFAFTGIPTAAFLWFKSVEVANKEAEDQDRRDGYL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G51510.1 unknown protein1.8e-4959.2Show/hide
Query:  CCNPRLGCNYGGMDPRRIAF-GHLRAIGRR--------NHGYQKLTVFALTEGSAKSSDSEETIPSWAKPDSEEPPPWARNEGKEAGSSLGFQVPFYVYL
        CCN           P +  F GH    GRR            ++L V A TEGS KS +SE   PSWA PDS+EPPPWARNEG+ + S   F+VPF+VYL
Subjt:  CCNPRLGCNYGGMDPRRIAF-GHLRAIGRR--------NHGYQKLTVFALTEGSAKSSDSEETIPSWAKPDSEEPPPWARNEGKEAGSSLGFQVPFYVYL

Query:  LASSITAIAAIGSVFEYVNQKPVFGIINSDSIFYAPILGFFAFTGIPTAAFLWFKSVEVANKEAEDQDRRDGYL
        LAS+ITAIAAIGSVFEY ++ PVFGI+ SDSIFY P+LGFFA TGIPT+ FLWFKSVE ANKEA++QD+RDG+L
Subjt:  LASSITAIAAIGSVFEYVNQKPVFGIINSDSIFYAPILGFFAFTGIPTAAFLWFKSVEVANKEAEDQDRRDGYL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGTGTCTCATTTTGATTCTGAATTTTCTGTACGAAATTTAATTTTATTGAAGCTGATCGTGAAAGAACAACAACTGGGAGCAATGTCTGCGATCATGTTGTCTTG
TTGCAATCCAAGATTAGGGTGTAATTACGGGGGGATGGATCCCAGACGCATTGCATTCGGGCATTTACGGGCTATTGGAAGGAGAAACCATGGCTATCAAAAGCTTACTG
TGTTTGCCCTTACAGAAGGGTCTGCGAAATCGAGCGACTCCGAAGAAACTATCCCTTCTTGGGCTAAACCCGACTCGGAGGAGCCTCCTCCTTGGGCGAGGAATGAGGGA
AAGGAAGCTGGATCCTCGCTGGGATTTCAGGTTCCTTTCTATGTTTACTTACTCGCCTCATCGATCACTGCCATTGCCGCGATAGGTTCTGTATTTGAGTACGTCAACCA
GAAGCCTGTCTTTGGAATTATAAATTCAGACAGCATATTTTACGCTCCAATTCTCGGCTTTTTCGCATTTACTGGCATTCCCACTGCTGCATTCCTTTGGTTCAAATCTG
TTGAAGTTGCTAATAAGGAAGCTGAGGATCAAGACAGAAGGGATGGTTACTTGTAG
mRNA sequenceShow/hide mRNA sequence
GTTTATTTGAATTTAATTTTTGTGTGGTTGGTCATGGTTATCCTGAGAGTATTATATCTCCTTCGAAAGTGAGCGCTCGTTCAGTCCTCTACCCTATCCCTGCCGGTAGC
CCCACGGAGGCCGGAAAGTTCAGCGCTACGCTCTCGCGTTTCACTCAAATCTCTTCAACAAAGTTCATCTCTCTTACTTTTCCTTTTCTCTTTCTCGCGTTTCAAGCAAA
AATCATGGCATCTTTTCTATTACCACAGATTTTATATGTTGGTGTCTCATTTTGATTCTGAATTTTCTGTACGAAATTTAATTTTATTGAAGCTGATCGTGAAAGAACAA
CAACTGGGAGCAATGTCTGCGATCATGTTGTCTTGTTGCAATCCAAGATTAGGGTGTAATTACGGGGGGATGGATCCCAGACGCATTGCATTCGGGCATTTACGGGCTAT
TGGAAGGAGAAACCATGGCTATCAAAAGCTTACTGTGTTTGCCCTTACAGAAGGGTCTGCGAAATCGAGCGACTCCGAAGAAACTATCCCTTCTTGGGCTAAACCCGACT
CGGAGGAGCCTCCTCCTTGGGCGAGGAATGAGGGAAAGGAAGCTGGATCCTCGCTGGGATTTCAGGTTCCTTTCTATGTTTACTTACTCGCCTCATCGATCACTGCCATT
GCCGCGATAGGTTCTGTATTTGAGTACGTCAACCAGAAGCCTGTCTTTGGAATTATAAATTCAGACAGCATATTTTACGCTCCAATTCTCGGCTTTTTCGCATTTACTGG
CATTCCCACTGCTGCATTCCTTTGGTTCAAATCTGTTGAAGTTGCTAATAAGGAAGCTGAGGATCAAGACAGAAGGGATGGTTACTTGTAGAATATTTTCTCAAACACGT
CTTCACTGTCCTATATAACAATGCCGATTTCTTTTTTTTTTTTGCTTCACTTGTGAACTGTATATTCTCTTTGAGCAGCAGGCTACAGTTTACTGTTGCTAATTAGGCAG
CTACTGTTGTATCAAAGTTTCAATCTATGACTGAATTAGGTCAGTAACACAGTGGTTTCATTGTTCGGTTGCAAACTACTTCAGTACCGGCGTCACAAGTACTTGTCCCC
CCTCTTCTGATATGTACT
Protein sequenceShow/hide protein sequence
MLVSHFDSEFSVRNLILLKLIVKEQQLGAMSAIMLSCCNPRLGCNYGGMDPRRIAFGHLRAIGRRNHGYQKLTVFALTEGSAKSSDSEETIPSWAKPDSEEPPPWARNEG
KEAGSSLGFQVPFYVYLLASSITAIAAIGSVFEYVNQKPVFGIINSDSIFYAPILGFFAFTGIPTAAFLWFKSVEVANKEAEDQDRRDGYL