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Sed0011638 (gene) of Chayote v1 genome

Gene IDSed0011638
OrganismSechium edule (Chayote v1)
Descriptionprotein LITTLE ZIPPER 4
Genome locationLG02:42942507..42944027
RNA-Seq ExpressionSed0011638
SyntenySed0011638
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR039312 - Protein LITTLE ZIPPER


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB1223589.1 hypothetical protein CJ030_MR2G024120 [Morella rubra]3.2e-1980.82Show/hide
Query:  MERLNSDLYIQNCYIMKENERLRKKAQLLNQENQVLLSELKQKLSKG----NASKSIPDLNLSSTSVTNPNSS
        MERLNS LY+QNCYIMKENERLRKKAQ+LNQENQVLLSELKQKLSKG    NA+ +IPDLNLSS+S  NP+SS
Subjt:  MERLNSDLYIQNCYIMKENERLRKKAQLLNQENQVLLSELKQKLSKG----NASKSIPDLNLSSTSVTNPNSS

KAF3441681.1 hypothetical protein FNV43_RR15596 [Rhamnella rubrinervis]5.4e-1981.08Show/hide
Query:  MERLNSDLYIQNCYIMKENERLRKKAQLLNQENQVLLSELKQKL----SKGNASKSIPDLNLSSTSVTNPNSSN
        MERLNS LY+QNCYIMKENERLRKKAQLLNQENQ LLSELKQKL    SK NA+KSIPDLNLSSTS  NP+ S+
Subjt:  MERLNSDLYIQNCYIMKENERLRKKAQLLNQENQVLLSELKQKL----SKGNASKSIPDLNLSSTSVTNPNSSN

KAG7028099.1 Protein LITTLE ZIPPER 4, partial [Cucurbita argyrosperma subsp. argyrosperma]1.9e-1982.86Show/hide
Query:  MERLNSDLYIQNCYIMKENERLRKKAQLLNQENQVLLSELKQKLSKGNASKSIPDLNLSSTSVTNPNSSN
        MERLNSDLY+QNCYIMKENERLRKKAQ+LNQENQ LLSELKQKLSKG  +KSIPDLNL S S+TNP++S+
Subjt:  MERLNSDLYIQNCYIMKENERLRKKAQLLNQENQVLLSELKQKLSKGNASKSIPDLNLSSTSVTNPNSSN

XP_008442826.1 PREDICTED: protein LITTLE ZIPPER 4 [Cucumis melo]1.2e-1880.56Show/hide
Query:  MERLNSDLYIQNCYIMKENERLRKKAQLLNQENQVLLSELKQKLSKG----NASKSIPDLNLSSTSVTNPNS
        MERLNS+LY+QNCYIMKENERLRKKAQLLNQENQ LLSELKQKLSKG    NASKSIPDLNLSS + +N ++
Subjt:  MERLNSDLYIQNCYIMKENERLRKKAQLLNQENQVLLSELKQKLSKG----NASKSIPDLNLSSTSVTNPNS

XP_022144704.1 protein LITTLE ZIPPER 4 [Momordica charantia]1.3e-2082.43Show/hide
Query:  MERLNSDLYIQNCYIMKENERLRKKAQLLNQENQVLLSELKQKLSKGN-----ASKSIPDLNLSSTSVTNPNSS
        MERLNSDLY+QNCYIMKENERLRKKAQ+LNQENQ LLSELKQKLSKG+     +SKSIPDLNLSS SVTNP++S
Subjt:  MERLNSDLYIQNCYIMKENERLRKKAQLLNQENQVLLSELKQKLSKGN-----ASKSIPDLNLSSTSVTNPNSS

TrEMBL top hitse value%identityAlignment
A0A0A0LE03 Uncharacterized protein5.8e-1980.56Show/hide
Query:  MERLNSDLYIQNCYIMKENERLRKKAQLLNQENQVLLSELKQKLSKG----NASKSIPDLNLSSTSVTNPNS
        MERLNS+LY+QNCYIMKENERLRKKAQLLNQENQ LLSELKQKLSKG    NASKSIPDLNLSS + +N ++
Subjt:  MERLNSDLYIQNCYIMKENERLRKKAQLLNQENQVLLSELKQKLSKG----NASKSIPDLNLSSTSVTNPNS

A0A1S3B7E3 protein LITTLE ZIPPER 45.8e-1980.56Show/hide
Query:  MERLNSDLYIQNCYIMKENERLRKKAQLLNQENQVLLSELKQKLSKG----NASKSIPDLNLSSTSVTNPNS
        MERLNS+LY+QNCYIMKENERLRKKAQLLNQENQ LLSELKQKLSKG    NASKSIPDLNLSS + +N ++
Subjt:  MERLNSDLYIQNCYIMKENERLRKKAQLLNQENQVLLSELKQKLSKG----NASKSIPDLNLSSTSVTNPNS

A0A6A1WE89 Uncharacterized protein1.5e-1980.82Show/hide
Query:  MERLNSDLYIQNCYIMKENERLRKKAQLLNQENQVLLSELKQKLSKG----NASKSIPDLNLSSTSVTNPNSS
        MERLNS LY+QNCYIMKENERLRKKAQ+LNQENQVLLSELKQKLSKG    NA+ +IPDLNLSS+S  NP+SS
Subjt:  MERLNSDLYIQNCYIMKENERLRKKAQLLNQENQVLLSELKQKLSKG----NASKSIPDLNLSSTSVTNPNSS

A0A6J1CT31 protein LITTLE ZIPPER 46.2e-2182.43Show/hide
Query:  MERLNSDLYIQNCYIMKENERLRKKAQLLNQENQVLLSELKQKLSKGN-----ASKSIPDLNLSSTSVTNPNSS
        MERLNSDLY+QNCYIMKENERLRKKAQ+LNQENQ LLSELKQKLSKG+     +SKSIPDLNLSS SVTNP++S
Subjt:  MERLNSDLYIQNCYIMKENERLRKKAQLLNQENQVLLSELKQKLSKGN-----ASKSIPDLNLSSTSVTNPNSS

A0A6P6AQP1 protein LITTLE ZIPPER 4-like isoform X21.3e-1877.03Show/hide
Query:  MERLNSDLYIQNCYIMKENERLRKKAQLLNQENQVLLSELKQKL----SKGNASKSIPDLNLSSTSVTNPNSSN
        MERLNS+LY+QNCYIMKENERLRKKAQLLNQENQ LLSELKQKL    SKGN++ +IPDLNLSS+S  NP++S+
Subjt:  MERLNSDLYIQNCYIMKENERLRKKAQLLNQENQVLLSELKQKL----SKGNASKSIPDLNLSSTSVTNPNSSN

SwissProt top hitse value%identityAlignment
F4IG60 Protein LITTLE ZIPPER 16.7e-0453.49Show/hide
Query:  MERLNSDLYIQNCYIMKENERLRKKAQLLNQENQVLLSELKQK
        ME +N  LY++N  I++ENE+L+KKA LL+QEN+ L S L+ K
Subjt:  MERLNSDLYIQNCYIMKENERLRKKAQLLNQENQVLLSELKQK

Q56WL5 Protein LITTLE ZIPPER 44.6e-1363.38Show/hide
Query:  MERLNSDLYIQNCYIMKENERLRKKAQLLNQENQVLLSELKQKLSK-GNASKSIPDLNLSSTSVTNPNSSN
        MERLNS LY+QNCYI+KENERLRKKAQ+LNQENQ LL ELKQKLSK  N+S S    N ++ ++++ +S++
Subjt:  MERLNSDLYIQNCYIMKENERLRKKAQLLNQENQVLLSELKQKLSK-GNASKSIPDLNLSSTSVTNPNSSN

Q9LXI8 Protein LITTLE ZIPPER 31.0e-1264.06Show/hide
Query:  MERLNSDLYIQNCYIMKENERLRKKAQLLNQENQVLLSELKQKLSKGNASKSIPDLNLSSTSVT
        MERLNS L+++NCYIMKENERLRKKA+LLNQENQ LL +LKQKLSK   S +  + +  S+S +
Subjt:  MERLNSDLYIQNCYIMKENERLRKKAQLLNQENQVLLSELKQKLSKGNASKSIPDLNLSSTSVT

Arabidopsis top hitse value%identityAlignment
AT2G45450.1 protein binding4.7e-0553.49Show/hide
Query:  MERLNSDLYIQNCYIMKENERLRKKAQLLNQENQVLLSELKQK
        ME +N  LY++N  I++ENE+L+KKA LL+QEN+ L S L+ K
Subjt:  MERLNSDLYIQNCYIMKENERLRKKAQLLNQENQVLLSELKQK

AT3G52770.1 protein binding7.3e-1464.06Show/hide
Query:  MERLNSDLYIQNCYIMKENERLRKKAQLLNQENQVLLSELKQKLSKGNASKSIPDLNLSSTSVT
        MERLNS L+++NCYIMKENERLRKKA+LLNQENQ LL +LKQKLSK   S +  + +  S+S +
Subjt:  MERLNSDLYIQNCYIMKENERLRKKAQLLNQENQVLLSELKQKLSKGNASKSIPDLNLSSTSVT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAGGCTAAATTCAGATCTGTACATTCAAAACTGTTACATAATGAAGGAAAATGAGAGACTGAGGAAGAAAGCTCAGCTATTGAACCAAGAAAATCAAGTGCTTCT
TTCAGAGCTTAAGCAGAAATTGTCAAAGGGAAATGCTTCAAAATCAATCCCTGATCTTAATCTCTCCTCTACTTCTGTTACAAATCCAAATTCTTCCAATTGA
mRNA sequenceShow/hide mRNA sequence
CTTTCCTCTTCTTTCTGCTTCTTCCACACAAGTGCTTCTGTTGCAATATCCACTTTGTTTTCTCTCTCTTCCCAACCAACCCCATCTCCAAAAGGTGATCTTTTTTGAAA
TTATAAAGAAATTTAACAAACACCCACTTTCTCTCTCCTCTTTACATTTTACATATATCCTTTGTTGTCTTCTTCAAGTTCTCCTCTTGCTTTTTCTTTCATCAACAAAG
GATAAGGAAGGGAGGTTTGGATTTTGGAAGAAGGATCAATTGATAAATATTTATACAATTAATCCAATTGTTGATTTATCAGAGGAGAAATGGAGAGGCTAAATTCAGAT
CTGTACATTCAAAACTGTTACATAATGAAGGAAAATGAGAGACTGAGGAAGAAAGCTCAGCTATTGAACCAAGAAAATCAAGTGCTTCTTTCAGAGCTTAAGCAGAAATT
GTCAAAGGGAAATGCTTCAAAATCAATCCCTGATCTTAATCTCTCCTCTACTTCTGTTACAAATCCAAATTCTTCCAATTGATTTCATAATATCAATGGAAGAACAAGAA
CAAGATGAAGATGATGATGATGATATCATGACATCACTAAAAGTTTATCTTTTTTTGTTTCATTTTTTGTGAATTACCATAGCCAACAGTATCTACTAGTGTTTGGGGTT
TCAGTTATATAGGACAGTCTGTAGTTTTAGC
Protein sequenceShow/hide protein sequence
MERLNSDLYIQNCYIMKENERLRKKAQLLNQENQVLLSELKQKLSKGNASKSIPDLNLSSTSVTNPNSSN