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Sed0011643 (gene) of Chayote v1 genome

Gene IDSed0011643
OrganismSechium edule (Chayote v1)
DescriptionEpidermal patterning factor-like protein
Genome locationLG01:57423613..57423858
RNA-Seq ExpressionSed0011643
SyntenySed0011643
Gene Ontology termsGO:0010052 - guard cell differentiation (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR039455 - EPIDERMAL PATTERNING FACTOR-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146810.1 EPIDERMAL PATTERNING FACTOR-like protein 3 [Cucumis sativus]1.8e-2676.32Show/hide
Query:  SVKVVEGVKENGVMYRGMRKVGSSLPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGCKCKCGPSFHSP
        S + V+GVKE    YRGMRK+GSS P CEHKCYGCIPCEAIQVPT   R +HVGVQYTNYEPEG KCKCGPSF+SP
Subjt:  SVKVVEGVKENGVMYRGMRKVGSSLPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGCKCKCGPSFHSP

XP_008447616.1 PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 3 [Cucumis melo]3.1e-2673.68Show/hide
Query:  SVKVVEGVKENGVMYRGMRKVGSSLPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGCKCKCGPSFHSP
        S + V+G+KE    YRGMRK+GSS P CEHKCYGCIPCEAIQVPT   R +H+GVQYTNYEPEG KCKCGPSF+SP
Subjt:  SVKVVEGVKENGVMYRGMRKVGSSLPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGCKCKCGPSFHSP

XP_022955437.1 EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucurbita moschata]1.6e-2777.92Show/hide
Query:  SVKVV-EGVKENGVMYRGMRKVGSSLPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGCKCKCGPSFHSP
        SVK V EGV + G +YRGMRK+GSS P CEHKCYGC PCEAIQVPTNN+R +HVG+QYTNYEPEG KCKCGPSF+SP
Subjt:  SVKVV-EGVKENGVMYRGMRKVGSSLPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGCKCKCGPSFHSP

XP_022980756.1 EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucurbita maxima]2.1e-2777.92Show/hide
Query:  SVKVV-EGVKENGVMYRGMRKVGSSLPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGCKCKCGPSFHSP
        SVK V EGV + G +YRGMRK+GSS P CEHKCYGC PCEAIQVPTNN+R +HVG+QYTNYEPEG KCKCGPSF+SP
Subjt:  SVKVV-EGVKENGVMYRGMRKVGSSLPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGCKCKCGPSFHSP

XP_023526549.1 EPIDERMAL PATTERNING FACTOR-like protein 2 [Cucurbita pepo subsp. pepo]1.6e-2777.92Show/hide
Query:  SVKVV-EGVKENGVMYRGMRKVGSSLPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGCKCKCGPSFHSP
        SVK V EGV + G +YRGMRK+GSS P CEHKCYGC PCEAIQVPTNN+R +HVG+QYTNYEPEG KCKCGPSF+SP
Subjt:  SVKVV-EGVKENGVMYRGMRKVGSSLPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGCKCKCGPSFHSP

TrEMBL top hitse value%identityAlignment
A0A0A0LCQ8 Epidermal patterning factor-like protein2.3e-2777.33Show/hide
Query:  VKVVEGVKENGVMYRGMRKVGSSLPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGCKCKCGPSFHSP
        +K V+GVKE    YRGMRK+GSS P CEHKCYGCIPCEAIQVPT   R +HVGVQYTNYEPEG KCKCGPSF+SP
Subjt:  VKVVEGVKENGVMYRGMRKVGSSLPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGCKCKCGPSFHSP

A0A1S3BIS6 Epidermal patterning factor-like protein1.5e-2673.68Show/hide
Query:  SVKVVEGVKENGVMYRGMRKVGSSLPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGCKCKCGPSFHSP
        S + V+G+KE    YRGMRK+GSS P CEHKCYGCIPCEAIQVPT   R +H+GVQYTNYEPEG KCKCGPSF+SP
Subjt:  SVKVVEGVKENGVMYRGMRKVGSSLPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGCKCKCGPSFHSP

A0A5D3BVF6 Epidermal patterning factor-like protein1.5e-2673.68Show/hide
Query:  SVKVVEGVKENGVMYRGMRKVGSSLPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGCKCKCGPSFHSP
        S + V+G+KE    YRGMRK+GSS P CEHKCYGCIPCEAIQVPT   R +H+GVQYTNYEPEG KCKCGPSF+SP
Subjt:  SVKVVEGVKENGVMYRGMRKVGSSLPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGCKCKCGPSFHSP

A0A6J1GTM4 Epidermal patterning factor-like protein7.9e-2877.92Show/hide
Query:  SVKVV-EGVKENGVMYRGMRKVGSSLPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGCKCKCGPSFHSP
        SVK V EGV + G +YRGMRK+GSS P CEHKCYGC PCEAIQVPTNN+R +HVG+QYTNYEPEG KCKCGPSF+SP
Subjt:  SVKVV-EGVKENGVMYRGMRKVGSSLPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGCKCKCGPSFHSP

A0A6J1IUG9 Epidermal patterning factor-like protein1.0e-2777.92Show/hide
Query:  SVKVV-EGVKENGVMYRGMRKVGSSLPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGCKCKCGPSFHSP
        SVK V EGV + G +YRGMRK+GSS P CEHKCYGC PCEAIQVPTNN+R +HVG+QYTNYEPEG KCKCGPSF+SP
Subjt:  SVKVV-EGVKENGVMYRGMRKVGSSLPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGCKCKCGPSFHSP

SwissProt top hitse value%identityAlignment
C4B8C4 EPIDERMAL PATTERNING FACTOR-like protein 32.2e-1154.72Show/hide
Query:  RKVGSSLPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGCKCKCGP
        R++GS  P CE KCYGC PCEAIQ PT +    H+   Y NY+PEG +C C P
Subjt:  RKVGSSLPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGCKCKCGP

Q1PEY6 EPIDERMAL PATTERNING FACTOR-like protein 61.8e-0540.98Show/hide
Query:  RGMRKVGSSLPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGCKCKCGPSFHSP
        R +R +GSS P C  KC  C PC+ + VP     GT V  +   Y PE  +CKCG   + P
Subjt:  RGMRKVGSSLPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGCKCKCGPSFHSP

Q9LFT5 EPIDERMAL PATTERNING FACTOR-like protein 19.7e-0736.84Show/hide
Query:  KVGSSLPMCEHKCYGCIPCEAIQVPTNNKRG-------------------THVGVQYTNYEPEGCKCKCGPSFHSP
        ++GS+ P C ++C  C PC AIQVPT   R                    T V  QY+NY+P G KC C   F++P
Subjt:  KVGSSLPMCEHKCYGCIPCEAIQVPTNNKRG-------------------THVGVQYTNYEPEGCKCKCGPSFHSP

Arabidopsis top hitse value%identityAlignment
AT2G30370.1 allergen-related1.3e-0640.98Show/hide
Query:  RGMRKVGSSLPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGCKCKCGPSFHSP
        R +R +GSS P C  KC  C PC+ + VP     GT V  +   Y PE  +CKCG   + P
Subjt:  RGMRKVGSSLPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGCKCKCGPSFHSP

AT2G30370.2 allergen-related1.3e-0640.98Show/hide
Query:  RGMRKVGSSLPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGCKCKCGPSFHSP
        R +R +GSS P C  KC  C PC+ + VP     GT V  +   Y PE  +CKCG   + P
Subjt:  RGMRKVGSSLPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGCKCKCGPSFHSP

AT3G13898.1 unknown protein1.6e-1254.72Show/hide
Query:  RKVGSSLPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGCKCKCGP
        R++GS  P CE KCYGC PCEAIQ PT +    H+   Y NY+PEG +C C P
Subjt:  RKVGSSLPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGCKCKCGP

AT5G10310.1 unknown protein6.9e-0836.84Show/hide
Query:  KVGSSLPMCEHKCYGCIPCEAIQVPTNNKRG-------------------THVGVQYTNYEPEGCKCKCGPSFHSP
        ++GS+ P C ++C  C PC AIQVPT   R                    T V  QY+NY+P G KC C   F++P
Subjt:  KVGSSLPMCEHKCYGCIPCEAIQVPTNNKRG-------------------THVGVQYTNYEPEGCKCKCGPSFHSP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAACTCTGGCTGTCTGTGAAGGTTGTTGAAGGTGTAAAGGAAAATGGAGTAATGTACAGAGGGATGAGGAAAGTAGGGTCCAGTCTACCAATGTGTGAGCACAAGTG
CTATGGATGCATCCCATGTGAAGCCATTCAAGTCCCAACCAACAACAAAAGGGGCACCCATGTAGGGGTCCAATACACTAACTATGAGCCTGAGGGATGTAAATGCAAGT
GTGGCCCTTCCTTTCACAGCCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAACTCTGGCTGTCTGTGAAGGTTGTTGAAGGTGTAAAGGAAAATGGAGTAATGTACAGAGGGATGAGGAAAGTAGGGTCCAGTCTACCAATGTGTGAGCACAAGTG
CTATGGATGCATCCCATGTGAAGCCATTCAAGTCCCAACCAACAACAAAAGGGGCACCCATGTAGGGGTCCAATACACTAACTATGAGCCTGAGGGATGTAAATGCAAGT
GTGGCCCTTCCTTTCACAGCCCTTGA
Protein sequenceShow/hide protein sequence
MQLWLSVKVVEGVKENGVMYRGMRKVGSSLPMCEHKCYGCIPCEAIQVPTNNKRGTHVGVQYTNYEPEGCKCKCGPSFHSP