; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0011660 (gene) of Chayote v1 genome

Gene IDSed0011660
OrganismSechium edule (Chayote v1)
Descriptionglycine-rich cell wall structural protein 1
Genome locationLG04:34547367..34548041
RNA-Seq ExpressionSed0011660
SyntenySed0011660
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050716.1 hypothetical protein E6C27_scaffold560G00130 [Cucumis melo var. makuwa]3.5e-0560.47Show/hide
Query:  MGGEWKRVSLLLCLLCFHVLMSTATQ----VEERLLFSDESGGSGGGFGG--GFGGG-GGGNGGGSGGGHGVGGGSGSGGGFGGGHGAGS--GSGSGSGS
        M   WKRV+ LL LLCFHVL+          EE+ LF  +SGG GGGFGG  GFGGG GGG GGG GGG G GGG G GGG+GGGHG G   G G G G 
Subjt:  MGGEWKRVSLLLCLLCFHVLMSTATQ----VEERLLFSDESGGSGGGFGG--GFGGG-GGGNGGGSGGGHGVGGGSGSGGGFGGGHGAGS--GSGSGSGS

Query:  GSGNGFGGGHGVGGGSGSGGGFGGGHGVGSGSGGGRGVGGSNGRGGGDGVGSGSGNGGGFGGGRGVGSGSGGGFGKGGGVGGSFGKGDGGGFGGGSDGGR
        G G G GGG GVGGG G GGG GGG G G G GGG G G   G G G G+G G G GGG GG    G+G+GGGFGKGGG+GG  GK  GGG GGG+  G 
Subjt:  GSGNGFGGGHGVGGGSGSGGGFGGGHGVGSGSGGGRGVGGSNGRGGGDGVGSGSGNGGGFGGGRGVGSGSGGGFGKGGGVGGSFGKGDGGGFGGGSDGGR

Query:  GFGSGGGGGGGSGSG
        GFG GGG GGG G G
Subjt:  GFGSGGGGGGGSGSG

XP_010670979.1 PREDICTED: glycine-rich cell wall structural protein [Beta vulgaris subsp. vulgaris]1.6e-0553.72Show/hide
Query:  MGGEWKRVSLLLCLLCFHVLMSTA----------TQVEERLLFSDESGGSGGGFGGGFGGGGGGNGGGSGGGHGVGGGSGSGGGFGGGHGAGSGSGSGSG
        M G  KR+SLL  LLCFH+ +++           +  +E+ LF     G GGGFGGGFGGGGGG GGG GGG G GGG+G GGGFGGG G G G G+G G
Subjt:  MGGEWKRVSLLLCLLCFHVLMSTA----------TQVEERLLFSDESGGSGGGFGGGFGGGGGGNGGGSGGGHGVGGGSGSGGGFGGGHGAGSGSGSGSG

Query:  SGSGNGFGGGHGVGGGSGSGGGFGGGHGVGSGSGGGRGVGGSNGRGGGDGVGSGSGN------------------GGGFGGGRGVGSGSGGGFGKGGGVG
         G G G GGGHG+GG    GGG GGGHG+G G GGG G+GG  G GGG GVG G G                   GGGFGGG GVG G GGG GKGGG+G
Subjt:  SGSGNGFGGGHGVGGGSGSGGGFGGGHGVGSGSGGGRGVGGSNGRGGGDGVGSGSGN------------------GGGFGGGRGVGSGSGGGFGKGGGVG

Query:  GSFGK--------GDGGGFGGGSDGGRGFGSGGGGGGGSGSG
        G  GK        G GGGFGGG   G G G G GGG G G G
Subjt:  GSFGK--------GDGGGFGGGSDGGRGFGSGGGGGGGSGSG

XP_016902584.1 PREDICTED: glycine-rich cell wall structural protein 1 [Cucumis melo]1.6e-0557.5Show/hide
Query:  MGGEWKRVSLLLCLLCFHVLMSTATQ----VEERLLFSDESGGSGGGFGG--GFGGG-GGGNGGGSGGGHGVGGGSGSGGGFGGGHGAGS--GSGSGSGS
        M   WKRV+ LL LLCFHVL+          EE+ LF  +SGG GGGFGG  GFGGG GGG GGG GGG G GGG G GGG+GGGHG G   G G G G 
Subjt:  MGGEWKRVSLLLCLLCFHVLMSTATQ----VEERLLFSDESGGSGGGFGG--GFGGG-GGGNGGGSGGGHGVGGGSGSGGGFGGGHGAGS--GSGSGSGS

Query:  GSGNGFGGGHGVGGGSGSGGGFGGGHGVGSGSGGGRG-------------------VGGSNGRGG------GDGVGSGSGNGGGFGGGRGVGSGSGGGFG
        G G G GGG GVGGG G GGG GGG G G G GGG G                   VGG  G+GG      G G G G G GGG G G G G G+GGGFG
Subjt:  GSGNGFGGGHGVGGGSGSGGGFGGGHGVGSGSGGGRG-------------------VGGSNGRGG------GDGVGSGSGNGGGFGGGRGVGSGSGGGFG

Query:  KGGGVGGSFGKGDGGGFGGGSDGGRGFGSGGGGGGGSGSG
        KGGGVGG FGK  GGGFGGG  GG G G GGGGGGG G G
Subjt:  KGGGVGGSFGKGDGGGFGGGSDGGRGFGSGGGGGGGSGSG

XP_021721872.1 glycine-rich cell wall structural protein-like [Chenopodium quinoa]1.0e-0458.22Show/hide
Query:  MGGEWKRVSLLLCLLCFHVLMS--------TATQVEERLLFSDESGGSGGGFGGGFGG-GGGGNGGGSGGGHGVGGGSGSGGGFGGGHGAGSGSGSGSGS
        M G  KR+SLL  L+CFHV +S        T    +E+ LFS + GG GGGFGGG GG GGGG GGG GGG G GGG G GGGFGGG G G G G G G 
Subjt:  MGGEWKRVSLLLCLLCFHVLMS--------TATQVEERLLFSDESGGSGGGFGGGFGG-GGGGNGGGSGGGHGVGGGSGSGGGFGGGHGAGSGSGSGSGS

Query:  GSGNGFGGGHGVGGGSGSGGGFGGGHGVGSGSGGGRGVGGSNGRGG--GDGVGSGSGNGGGFGGGRGVGSGSGGGFGKGGGVGGSF--------GKGDGG
        G G   GGG G+GGG G GGG GGGHGVG G GGG G+GG  G+GG  G G+G G G GGG GGG GVG G GGG+GKGGG+GG          G G GG
Subjt:  GSGNGFGGGHGVGGGSGSGGGFGGGHGVGSGSGGGRGVGGSNGRGG--GDGVGSGSGNGGGFGGGRGVGSGSGGGFGKGGGVGGSF--------GKGDGG

Query:  GFGGGSDGGRGFGSGGGGGGGSGSG
        G GGG  GG G G G GGG G G G
Subjt:  GFGGGSDGGRGFGSGGGGGGGSGSG

XP_021752225.1 glycine-rich cell wall structural protein-like [Chenopodium quinoa]1.2e-0557.59Show/hide
Query:  MGGEWKRVSLLLCLLCFHVLMSTAT--------QVEERLLFSDESGGSGGGFGGGFGGGGGGNGGGSGGGHGVGGGSGSGGGFGGGHGAGSGSGSGSGSG
        M G  KR+SLL  L+CFHV +S+ +          +E+ LF     G GGGFGGGFGGGGGG GGG GGG G GGG G GGG G G GAG G G G G G
Subjt:  MGGEWKRVSLLLCLLCFHVLMSTAT--------QVEERLLFSDESGGSGGGFGGGFGGGGGGNGGGSGGGHGVGGGSGSGGGFGGGHGAGSGSGSGSGSG

Query:  SGNGFGGGHGVGGGSGSGGGFGGGHGVGSGSGGGRGVGGSNGRGG--GDGVGSGSGNGGGFGGGRGVGSGSGGGFGKGGGVGGSF--------GKGDGGG
         G G GGG G+GGG G GGG GGGHGVG G GGG G+GG  G+GG  G G+G G G GGG GGG GVG G GGG+GKGGG+GG          G G GGG
Subjt:  SGNGFGGGHGVGGGSGSGGGFGGGHGVGSGSGGGRGVGGSNGRGG--GDGVGSGSGNGGGFGGGRGVGSGSGGGFGKGGGVGGSF--------GKGDGGG

Query:  FGGGSDGGRGFGSGGGGGGGSGSG
         GGG  GG G G G GGG G G G
Subjt:  FGGGSDGGRGFGSGGGGGGGSGSG

TrEMBL top hitse value%identityAlignment
A0A0A0LIH7 Uncharacterized protein1.0e-0560.09Show/hide
Query:  MGGEWKRVSLLLCLLCFHVLMSTATQ----VEERLLFSDESGGSGGGFGGGFG-GGGGGNGGGSGGGHGVGGGSGSGGGFGGGHGAGS--GSGSGSGSGS
        M   WKRV+ LL LLCF V++          EE+ LF  +SGG G GFGGG G GGGGG GGG GGG G GGG G G GFGGGHG G   G G G G G 
Subjt:  MGGEWKRVSLLLCLLCFHVLMSTATQ----VEERLLFSDESGGSGGGFGGGFG-GGGGGNGGGSGGGHGVGGGSGSGGGFGGGHGAGS--GSGSGSGSGS

Query:  GNGFGGGHGVGG--------GSGSGGGFGGGHGVGSGSGGGRGVGGSNGRGGGDGVGSGSGNGGGF--GGGRGVGSGSGGGFGKGGGVGGSFGKGDGGGF
        G G GGG GVGG        G GSGGGFG G G+G G+GGG G GG  G G G G G G G GGG   GGG G G G+GGGFGKGGGVGG FGK  GGGF
Subjt:  GNGFGGGHGVGG--------GSGSGGGFGGGHGVGSGSGGGRGVGGSNGRGGGDGVGSGSGNGGGF--GGGRGVGSGSGGGFGKGGGVGGSFGKGDGGGF

Query:  GGGSDGGRGFGSGGGGGGGSGSG
        GGG  GG G G GGGGGGG G G
Subjt:  GGGSDGGRGFGSGGGGGGGSGSG

A0A1S2XY29 glycine-rich cell wall structural protein isoform X11.4e-0459.72Show/hide
Query:  KRVSLLLCLLCFHVLMSTAT--------QVEERLLFSDESGGSGGGFGGGFGGGGGGNGGGSGGGHGVGGGSGSGGGFGGGHGAGSGSGSGSGSGSGNGF
        KRV++LL LLC HV +++          + EE+ L   + GG GGGFGGG GG GGG GGG GGG G+GGG+G GGGFGGG G G G G G G G G G 
Subjt:  KRVSLLLCLLCFHVLMSTAT--------QVEERLLFSDESGGSGGGFGGGFGGGGGGNGGGSGGGHGVGGGSGSGGGFGGGHGAGSGSGSGSGSGSGNGF

Query:  GGGHGVGGGSGSGGGFGGGHGVGSGSGGGRGVGGSNGRGG--GDGVGSGSGNGGGFGGGRGVGSGSGGGFGKGGGVGGSFGKGDGGGFG-----GGSDGG
        GGGHG+GGG G GGG GGG G G G G G G GG  G+GG  G G G G G GGGFG G GVG G+GGGFGKGGG+GG  GKG GGGFG     GG  GG
Subjt:  GGGHGVGGGSGSGGGFGGGHGVGSGSGGGRGVGGSNGRGG--GDGVGSGSGNGGGFGGGRGVGSGSGGGFGKGGGVGGSFGKGDGGGFG-----GGSDGG

Query:  RGFGSGGGGGGGSGSG
         GFG GGG GGG G G
Subjt:  RGFGSGGGGGGGSGSG

A0A1S4E2X3 glycine-rich cell wall structural protein 17.7e-0657.5Show/hide
Query:  MGGEWKRVSLLLCLLCFHVLMSTATQ----VEERLLFSDESGGSGGGFGG--GFGGG-GGGNGGGSGGGHGVGGGSGSGGGFGGGHGAGS--GSGSGSGS
        M   WKRV+ LL LLCFHVL+          EE+ LF  +SGG GGGFGG  GFGGG GGG GGG GGG G GGG G GGG+GGGHG G   G G G G 
Subjt:  MGGEWKRVSLLLCLLCFHVLMSTATQ----VEERLLFSDESGGSGGGFGG--GFGGG-GGGNGGGSGGGHGVGGGSGSGGGFGGGHGAGS--GSGSGSGS

Query:  GSGNGFGGGHGVGGGSGSGGGFGGGHGVGSGSGGGRG-------------------VGGSNGRGG------GDGVGSGSGNGGGFGGGRGVGSGSGGGFG
        G G G GGG GVGGG G GGG GGG G G G GGG G                   VGG  G+GG      G G G G G GGG G G G G G+GGGFG
Subjt:  GSGNGFGGGHGVGGGSGSGGGFGGGHGVGSGSGGGRG-------------------VGGSNGRGG------GDGVGSGSGNGGGFGGGRGVGSGSGGGFG

Query:  KGGGVGGSFGKGDGGGFGGGSDGGRGFGSGGGGGGGSGSG
        KGGGVGG FGK  GGGFGGG  GG G G GGGGGGG G G
Subjt:  KGGGVGGSFGKGDGGGFGGGSDGGRGFGSGGGGGGGSGSG

A0A5D3BTN6 Uncharacterized protein1.7e-0560.47Show/hide
Query:  MGGEWKRVSLLLCLLCFHVLMSTATQ----VEERLLFSDESGGSGGGFGG--GFGGG-GGGNGGGSGGGHGVGGGSGSGGGFGGGHGAGS--GSGSGSGS
        M   WKRV+ LL LLCFHVL+          EE+ LF  +SGG GGGFGG  GFGGG GGG GGG GGG G GGG G GGG+GGGHG G   G G G G 
Subjt:  MGGEWKRVSLLLCLLCFHVLMSTATQ----VEERLLFSDESGGSGGGFGG--GFGGG-GGGNGGGSGGGHGVGGGSGSGGGFGGGHGAGS--GSGSGSGS

Query:  GSGNGFGGGHGVGGGSGSGGGFGGGHGVGSGSGGGRGVGGSNGRGGGDGVGSGSGNGGGFGGGRGVGSGSGGGFGKGGGVGGSFGKGDGGGFGGGSDGGR
        G G G GGG GVGGG G GGG GGG G G G GGG G G   G G G G+G G G GGG GG    G+G+GGGFGKGGG+GG  GK  GGG GGG+  G 
Subjt:  GSGNGFGGGHGVGGGSGSGGGFGGGHGVGSGSGGGRGVGGSNGRGGGDGVGSGSGNGGGFGGGRGVGSGSGGGFGKGGGVGGSFGKGDGGGFGGGSDGGR

Query:  GFGSGGGGGGGSGSG
        GFG GGG GGG G G
Subjt:  GFGSGGGGGGGSGSG

A0A5N6RDW5 Uncharacterized protein8.5e-0557.01Show/hide
Query:  MGGEWKRVSLLLCLLCFHVLMSTAT--------QVEERLLFSDESGGSGGGFGGGFGGGGGGNGG---GSGGGHGVGGGSGSGGGFGGGHGAGSGSGSGS
        MG   +RV+ LL LLC +VL+ +          + EE   FS  SGG GGGFGGGFGGGGG  GG   G G G G GGG+G GGG GGGHG G G+G G+
Subjt:  MGGEWKRVSLLLCLLCFHVLMSTAT--------QVEERLLFSDESGGSGGGFGGGFGGGGGGNGG---GSGGGHGVGGGSGSGGGFGGGHGAGSGSGSGS

Query:  GSGSGNGFGGGHGVGGGSGSGGGFGGGHGVGSGSGGGRGVGG--SNGRGGGDGVGSGSGNGGGFGGGRGVGSGSGGGFGKGGGVGGSFGKGD--GGGFGG
        G G+G GF      GGG+G GGG GGGHG+G G+GGG G GG    G G G GVG G+G GGG GGG G+G G+GGGFGKGGG+GG  GKG   GGG GG
Subjt:  GSGSGNGFGGGHGVGGGSGSGGGFGGGHGVGSGSGGGRGVGG--SNGRGGGDGVGSGSGNGGGFGGGRGVGSGSGGGFGKGGGVGGSFGKGD--GGGFGG

Query:  GSDGGRGFGSGGGGGGGSGSG
        G   G G G GGG GGG G G
Subjt:  GSDGGRGFGSGGGGGGGSGSG

SwissProt top hitse value%identityAlignment
P09789 Glycine-rich cell wall structural protein 14.0e-0465.91Show/hide
Query:  GGSGGGFGGGFGGGGG-GNGGGSGGGHGVGGGSGSGGGFGGGHGAGS----GSGSGSGSGSGNGFGGGHGVGGGSGSGGGFGGGHGVGSGSGGGRGVGGS
        GG+GGG GGG GGGGG G GGG+GGG G+GGG G+GGGFGGG G G+    G G G G G G G GGG GVGGG+GSGGGFG G GVG G+G G GVGG 
Subjt:  GGSGGGFGGGFGGGGG-GNGGGSGGGHGVGGGSGSGGGFGGGHGAGS----GSGSGSGSGSGNGFGGGHGVGGGSGSGGGFGGGHGVGSGSGGGRGVGGS

Query:  N--GRGGGDGVGSGSGNGGGFGGGRGVGSGSGGGFGKGGGVGGSFGKGDGGGFGGGSDGGRGFGSGGGGGGGSGSG
           G GGG GVG GSG+GGGFG G GVG G+GGG G G G GG  G G GGG GGGS  G GFG+GGG GGG G G
Subjt:  N--GRGGGDGVGSGSGNGGGFGGGRGVGSGSGGGFGKGGGVGGSFGKGDGGGFGGGSDGGRGFGSGGGGGGGSGSG

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGGTGAATGGAAGAGAGTGAGTTTGTTGTTATGTTTGTTGTGTTTTCATGTTCTTATGTCCACTGCCACTCAAGTGGAAGAGAGGCTGCTATTCTCTGACGAATC
TGGTGGAAGTGGAGGTGGTTTTGGAGGAGGATTCGGTGGCGGCGGTGGCGGAAATGGCGGTGGTTCTGGAGGGGGACATGGGGTGGGAGGCGGAAGCGGAAGTGGTGGCG
GTTTTGGAGGGGGACATGGGGCTGGAAGTGGCAGTGGCAGTGGCAGTGGAAGTGGAAGTGGCAATGGTTTTGGAGGGGGACATGGGGTTGGCGGCGGAAGCGGAAGTGGC
GGCGGTTTTGGAGGGGGACATGGGGTTGGCAGTGGTAGCGGAGGAGGACGAGGGGTTGGAGGCAGTAACGGAAGAGGTGGAGGAGACGGGGTTGGCAGCGGAAGCGGAAA
TGGTGGCGGTTTTGGAGGGGGACGTGGAGTTGGCAGCGGAAGTGGTGGAGGATTTGGTAAAGGTGGAGGTGTTGGCGGCAGCTTTGGAAAAGGTGATGGTGGAGGTTTTG
GTGGTGGTTCTGATGGTGGTCGTGGATTCGGAAGCGGTGGCGGAGGAGGTGGTGGAAGTGGCAGCGGCCAAATTGAACACCACTAA
mRNA sequenceShow/hide mRNA sequence
CAAATTAATATTGTTTAGATTGACGTGTACTCCAACAAGATGGGAGGTGAATGGAAGAGAGTGAGTTTGTTGTTATGTTTGTTGTGTTTTCATGTTCTTATGTCCACTGC
CACTCAAGTGGAAGAGAGGCTGCTATTCTCTGACGAATCTGGTGGAAGTGGAGGTGGTTTTGGAGGAGGATTCGGTGGCGGCGGTGGCGGAAATGGCGGTGGTTCTGGAG
GGGGACATGGGGTGGGAGGCGGAAGCGGAAGTGGTGGCGGTTTTGGAGGGGGACATGGGGCTGGAAGTGGCAGTGGCAGTGGCAGTGGAAGTGGAAGTGGCAATGGTTTT
GGAGGGGGACATGGGGTTGGCGGCGGAAGCGGAAGTGGCGGCGGTTTTGGAGGGGGACATGGGGTTGGCAGTGGTAGCGGAGGAGGACGAGGGGTTGGAGGCAGTAACGG
AAGAGGTGGAGGAGACGGGGTTGGCAGCGGAAGCGGAAATGGTGGCGGTTTTGGAGGGGGACGTGGAGTTGGCAGCGGAAGTGGTGGAGGATTTGGTAAAGGTGGAGGTG
TTGGCGGCAGCTTTGGAAAAGGTGATGGTGGAGGTTTTGGTGGTGGTTCTGATGGTGGTCGTGGATTCGGAAGCGGTGGCGGAGGAGGTGGTGGAAGTGGCAGCGGCCAA
ATTGAACACCACTAA
Protein sequenceShow/hide protein sequence
MGGEWKRVSLLLCLLCFHVLMSTATQVEERLLFSDESGGSGGGFGGGFGGGGGGNGGGSGGGHGVGGGSGSGGGFGGGHGAGSGSGSGSGSGSGNGFGGGHGVGGGSGSG
GGFGGGHGVGSGSGGGRGVGGSNGRGGGDGVGSGSGNGGGFGGGRGVGSGSGGGFGKGGGVGGSFGKGDGGGFGGGSDGGRGFGSGGGGGGGSGSGQIEHH