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Sed0011662 (gene) of Chayote v1 genome

Gene IDSed0011662
OrganismSechium edule (Chayote v1)
DescriptionVQ motif-containing protein 29
Genome locationLG05:45671350..45671691
RNA-Seq ExpressionSed0011662
SyntenySed0011662
Gene Ontology termsNA
InterPro domainsIPR008889 - VQ


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045761.1 VQ motif-containing protein 29 [Cucumis melo var. makuwa]3.2e-0547.06Show/hide
Query:  MEPHSSSFCCSETPESPRL--KRVM--EQPDPPRRIKWVYKVDSINFKDVVQRLTVAPEFLEPRLRDMPLPQPTPVYLSRTPSPS
        MEPHS SF  ++   S +   K+ +   +P PP+    VYKVD INF+DVVQ+LT APEF + RL+ MP P+P     SR P  S
Subjt:  MEPHSSSFCCSETPESPRL--KRVM--EQPDPPRRIKWVYKVDSINFKDVVQRLTVAPEFLEPRLRDMPLPQPTPVYLSRTPSPS

KAE8651906.1 hypothetical protein Csa_006780 [Cucumis sativus]1.6e-0447.95Show/hide
Query:  MEPHSSSFCCSE--TPESPRLKRVM--EQPDPPRRIKWVYKVDSINFKDVVQRLTVAPEFLEPRLRDMPLPQP
        MEPHS SF   +   P     K+ +   +P PP+    VYKVD INF+DVVQ+LT AP+F + RL+ MP P+P
Subjt:  MEPHSSSFCCSE--TPESPRLKRVM--EQPDPPRRIKWVYKVDSINFKDVVQRLTVAPEFLEPRLRDMPLPQP

KAG6605217.1 hypothetical protein SDJN03_02534, partial [Cucurbita argyrosperma subsp. sororia]2.7e-0442.17Show/hide
Query:  MEPHSSSFCCSE--------------TPESPRLKRVMEQPDPPRRIKWVYKVDSINFKDVVQRLTVAPEFLEPRLRDMPLPQP
        MEPHS S   S               +  SP+       P PPR    VYKV+ I F+DVVQ+LT  PE+L+PRL+ MP P+P
Subjt:  MEPHSSSFCCSE--------------TPESPRLKRVMEQPDPPRRIKWVYKVDSINFKDVVQRLTVAPEFLEPRLRDMPLPQP

XP_022149539.1 VQ motif-containing protein 29 [Momordica charantia]1.6e-0447.89Show/hide
Query:  MEPHSSSFCCSETPESPRLKRVMEQPDPPRRIKWVYKVDSINFKDVVQRLTVAPEFLEPRLRDMPLPQPTP
        MEPHSSS   S     P  + V   P  P +I   YKV+ ++F+DVVQ+LT APEF + RL+ MP P+P+P
Subjt:  MEPHSSSFCCSETPESPRLKRVMEQPDPPRRIKWVYKVDSINFKDVVQRLTVAPEFLEPRLRDMPLPQPTP

TrEMBL top hitse value%identityAlignment
A0A5A7TW54 VQ motif-containing protein 291.6e-0547.06Show/hide
Query:  MEPHSSSFCCSETPESPRL--KRVM--EQPDPPRRIKWVYKVDSINFKDVVQRLTVAPEFLEPRLRDMPLPQPTPVYLSRTPSPS
        MEPHS SF  ++   S +   K+ +   +P PP+    VYKVD INF+DVVQ+LT APEF + RL+ MP P+P     SR P  S
Subjt:  MEPHSSSFCCSETPESPRL--KRVM--EQPDPPRRIKWVYKVDSINFKDVVQRLTVAPEFLEPRLRDMPLPQPTPVYLSRTPSPS

A0A6J1D7B4 VQ motif-containing protein 297.7e-0547.89Show/hide
Query:  MEPHSSSFCCSETPESPRLKRVMEQPDPPRRIKWVYKVDSINFKDVVQRLTVAPEFLEPRLRDMPLPQPTP
        MEPHSSS   S     P  + V   P  P +I   YKV+ ++F+DVVQ+LT APEF + RL+ MP P+P+P
Subjt:  MEPHSSSFCCSETPESPRLKRVMEQPDPPRRIKWVYKVDSINFKDVVQRLTVAPEFLEPRLRDMPLPQPTP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACCACATTCTTCTTCTTTTTGCTGCTCCGAGACGCCGGAGAGCCCGCGGTTGAAGAGGGTGATGGAACAGCCAGATCCACCTCGCCGGATAAAGTGGGTTTACAA
GGTCGACTCAATAAACTTCAAGGATGTTGTTCAAAGGCTAACCGTAGCCCCTGAGTTTTTAGAACCCCGTCTTCGAGACATGCCGCTTCCCCAGCCAACTCCGGTATATC
TGTCTCGCACTCCGTCTCCGTCTCCGTCTCCCTCTCCGTCTCCCTCTCCGCCTTCCTCTCCGCCTTCCTCTCCTCCTTCTGCCCGCAAGGGCTCTCTTTCTTTAGATGAC
AAAGAATTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAACCACATTCTTCTTCTTTTTGCTGCTCCGAGACGCCGGAGAGCCCGCGGTTGAAGAGGGTGATGGAACAGCCAGATCCACCTCGCCGGATAAAGTGGGTTTACAA
GGTCGACTCAATAAACTTCAAGGATGTTGTTCAAAGGCTAACCGTAGCCCCTGAGTTTTTAGAACCCCGTCTTCGAGACATGCCGCTTCCCCAGCCAACTCCGGTATATC
TGTCTCGCACTCCGTCTCCGTCTCCGTCTCCCTCTCCGTCTCCCTCTCCGCCTTCCTCTCCGCCTTCCTCTCCTCCTTCTGCCCGCAAGGGCTCTCTTTCTTTAGATGAC
AAAGAATTGTAA
Protein sequenceShow/hide protein sequence
MEPHSSSFCCSETPESPRLKRVMEQPDPPRRIKWVYKVDSINFKDVVQRLTVAPEFLEPRLRDMPLPQPTPVYLSRTPSPSPSPSPSPSPPSSPPSSPPSARKGSLSLDD
KEL