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Sed0011665 (gene) of Chayote v1 genome

Gene IDSed0011665
OrganismSechium edule (Chayote v1)
DescriptionSRP54 domain-containing protein
Genome locationLG02:42745298..42746920
RNA-Seq ExpressionSed0011665
SyntenySed0011665
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596576.1 Rho GTPase-activating protein 1, partial [Cucurbita argyrosperma subsp. sororia]6.7e-2673.47Show/hide
Query:  GRGDGATDGAGSQFPAADVDRELHPGHNKHVEVDPVSSQVSESLQAKEKAKRKAADEEERKKEKKKETVQTLKTTFIVSAVIAAVAAAAFAIVKKLGQ
        GR  GAT GAGS+FPA DVDRELHPGHN+HV VDP+SSQV+ S++ KE+AKRKA  EEER++ KKK+T+QTLKTTFIVS VIAAVA AAF +VKKL Q
Subjt:  GRGDGATDGAGSQFPAADVDRELHPGHNKHVEVDPVSSQVSESLQAKEKAKRKAADEEERKKEKKKETVQTLKTTFIVSAVIAAVAAAAFAIVKKLGQ
XP_022144747.1 uncharacterized protein LOC111014362 [Momordica charantia]2.0e-2575Show/hide
Query:  MASPGRGDGATDGAGSQFPAADVDRELHPGHNKHVEVDPVSSQVSESLQAKEKAKRKAADEEERKKEKKKETVQTLKTTFIVSAVIAAVAAAAFAIVKKL
        MASPG   G +D AGS FPAADVDREL+PGHN+HVEVDPVSS+V+ SL+ KE+AKRKA  EEERK+ KK +T++TLKTTFIVS VIAAVA AAFAIVKKL
Subjt:  MASPGRGDGATDGAGSQFPAADVDRELHPGHNKHVEVDPVSSQVSESLQAKEKAKRKAADEEERKKEKKKETVQTLKTTFIVSAVIAAVAAAAFAIVKKL
XP_022947065.1 uncharacterized protein LOC111451047 [Cucurbita moschata]1.4e-2874.51Show/hide
Query:  MASPGRGDGATDGAGSQFPAADVDRELHPGHNKHVEVDPVSSQVSESLQAKEKAKRKAADEEERKKEKKKETVQTLKTTFIVSAVIAAVAAAAFAIVKKL
        MASPGR  GAT GAGS+FPA DVDRELHPGHN+HV VDP+SSQV+ S++ KE+AKRKA  EEERK+ KKK+T+QTLKTTFIVS V+AAVA AAF +VKKL
Subjt:  MASPGRGDGATDGAGSQFPAADVDRELHPGHNKHVEVDPVSSQVSESLQAKEKAKRKAADEEERKKEKKKETVQTLKTTFIVSAVIAAVAAAAFAIVKKL

Query:  GQ
         Q
Subjt:  GQ
XP_023005785.1 uncharacterized protein LOC111498680 [Cucurbita maxima]1.1e-2875.49Show/hide
Query:  MASPGRGDGATDGAGSQFPAADVDRELHPGHNKHVEVDPVSSQVSESLQAKEKAKRKAADEEERKKEKKKETVQTLKTTFIVSAVIAAVAAAAFAIVKKL
        MASPGR  GAT GAGS+FPA DVDRELHPGHN+HV VDP+SSQV+ S++ KE+AKRKA  EEERK+ KKK+T+QTLKTTFIVS VIAAVA AAF +VKKL
Subjt:  MASPGRGDGATDGAGSQFPAADVDRELHPGHNKHVEVDPVSSQVSESLQAKEKAKRKAADEEERKKEKKKETVQTLKTTFIVSAVIAAVAAAAFAIVKKL

Query:  GQ
         Q
Subjt:  GQ
XP_023539528.1 uncharacterized protein LOC111800168 [Cucurbita pepo subsp. pepo]4.1e-2373.86Show/hide
Query:  GSQFPAADVDRELHPGHNKHVEVDPVSSQVSESLQAKEKAKRKAADEEERKKEKKKETVQTLKTTFIVSAVIAAVAAAAFAIVKKLGQ
        GS+FPA DVDRELHPGHN+HV VDP+SSQV+ S++ KE+AKRKA  EEERK+ KKK+T+QTLKTTFIVS V+AAVA AAF +VKKL Q
Subjt:  GSQFPAADVDRELHPGHNKHVEVDPVSSQVSESLQAKEKAKRKAADEEERKKEKKKETVQTLKTTFIVSAVIAAVAAAAFAIVKKLGQ
TrEMBL top hitse value%identityAlignment
A0A0A0LBF7 Uncharacterized protein7.0e-2170.21Show/hide
Query:  GDGATDGAGSQFPAADVDRELHPGHNKHVEVDPVSSQVSESLQAKEKAKRKAADEEERKKEKKKETVQTLKTTFIVSAVIAAVAAAAFAIVKKL
        G    DG G  FPA DV+REL+PG NKHVEVDPVSSQV+ SL+AKE  KRKAA++E ++ +KKKE +QTLKTTFIVS +IAAVA AAFAIVKKL
Subjt:  GDGATDGAGSQFPAADVDRELHPGHNKHVEVDPVSSQVSESLQAKEKAKRKAADEEERKKEKKKETVQTLKTTFIVSAVIAAVAAAAFAIVKKL
A0A1S3B6R1 uncharacterized protein LOC1034866212.0e-2069.15Show/hide
Query:  GDGATDGAGSQFPAADVDRELHPGHNKHVEVDPVSSQVSESLQAKEKAKRKAADEEERKKEKKKETVQTLKTTFIVSAVIAAVAAAAFAIVKKL
        G    DG G  FPA DV+REL+PG NKHVEVDP+SSQV+ SL+AKE  KR AA+EE ++ +KKKE +QTLKTTFIVS +IAAVA AAFAIVKKL
Subjt:  GDGATDGAGSQFPAADVDRELHPGHNKHVEVDPVSSQVSESLQAKEKAKRKAADEEERKKEKKKETVQTLKTTFIVSAVIAAVAAAAFAIVKKL
A0A6J1CUK2 uncharacterized protein LOC1110143629.5e-2675Show/hide
Query:  MASPGRGDGATDGAGSQFPAADVDRELHPGHNKHVEVDPVSSQVSESLQAKEKAKRKAADEEERKKEKKKETVQTLKTTFIVSAVIAAVAAAAFAIVKKL
        MASPG   G +D AGS FPAADVDREL+PGHN+HVEVDPVSS+V+ SL+ KE+AKRKA  EEERK+ KK +T++TLKTTFIVS VIAAVA AAFAIVKKL
Subjt:  MASPGRGDGATDGAGSQFPAADVDRELHPGHNKHVEVDPVSSQVSESLQAKEKAKRKAADEEERKKEKKKETVQTLKTTFIVSAVIAAVAAAAFAIVKKL
A0A6J1G5S8 uncharacterized protein LOC1114510477.0e-2974.51Show/hide
Query:  MASPGRGDGATDGAGSQFPAADVDRELHPGHNKHVEVDPVSSQVSESLQAKEKAKRKAADEEERKKEKKKETVQTLKTTFIVSAVIAAVAAAAFAIVKKL
        MASPGR  GAT GAGS+FPA DVDRELHPGHN+HV VDP+SSQV+ S++ KE+AKRKA  EEERK+ KKK+T+QTLKTTFIVS V+AAVA AAF +VKKL
Subjt:  MASPGRGDGATDGAGSQFPAADVDRELHPGHNKHVEVDPVSSQVSESLQAKEKAKRKAADEEERKKEKKKETVQTLKTTFIVSAVIAAVAAAAFAIVKKL

Query:  GQ
         Q
Subjt:  GQ
A0A6J1KYC8 uncharacterized protein LOC1114986805.4e-2975.49Show/hide
Query:  MASPGRGDGATDGAGSQFPAADVDRELHPGHNKHVEVDPVSSQVSESLQAKEKAKRKAADEEERKKEKKKETVQTLKTTFIVSAVIAAVAAAAFAIVKKL
        MASPGR  GAT GAGS+FPA DVDRELHPGHN+HV VDP+SSQV+ S++ KE+AKRKA  EEERK+ KKK+T+QTLKTTFIVS VIAAVA AAF +VKKL
Subjt:  MASPGRGDGATDGAGSQFPAADVDRELHPGHNKHVEVDPVSSQVSESLQAKEKAKRKAADEEERKKEKKKETVQTLKTTFIVSAVIAAVAAAAFAIVKKL

Query:  GQ
         Q
Subjt:  GQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G52620.1 unknown protein5.5e-1051.81Show/hide
Query:  FPAADVDRELHPGHNKHVEVDPVSSQVSESLQAKEKAKRKAADEEERKKEKKKETVQTLKTTFIVSAVIAAVAAAAFAIVKKL
        FP  D + EL+PG NK+ EVDPVSS++     A EK ++     E  K   K++  +TLK T IVSAVI AVA AAFAI KKL
Subjt:  FPAADVDRELHPGHNKHVEVDPVSSQVSESLQAKEKAKRKAADEEERKKEKKKETVQTLKTTFIVSAVIAAVAAAAFAIVKKL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAGCCCAGGCAGAGGTGACGGAGCTACCGATGGTGCCGGTTCCCAGTTTCCGGCTGCTGACGTGGACAGAGAATTACATCCTGGCCATAACAAGCACGTTGAGGT
CGATCCCGTTTCCTCTCAAGTTTCTGAATCTCTCCAAGCTAAGGAGAAGGCGAAGAGGAAAGCAGCCGATGAAGAAGAGAGAAAGAAGGAGAAGAAGAAGGAAACCGTGC
AGACATTGAAGACGACGTTCATCGTCTCTGCCGTCATCGCTGCTGTGGCCGCCGCCGCCTTCGCCATCGTTAAGAAATTAGGCCAAAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAGCCCAGGCAGAGGTGACGGAGCTACCGATGGTGCCGGTTCCCAGTTTCCGGCTGCTGACGTGGACAGAGAATTACATCCTGGCCATAACAAGCACGTTGAGGT
CGATCCCGTTTCCTCTCAAGTTTCTGAATCTCTCCAAGCTAAGGAGAAGGCGAAGAGGAAAGCAGCCGATGAAGAAGAGAGAAAGAAGGAGAAGAAGAAGGAAACCGTGC
AGACATTGAAGACGACGTTCATCGTCTCTGCCGTCATCGCTGCTGTGGCCGCCGCCGCCTTCGCCATCGTTAAGAAATTAGGCCAAAAATAA
Protein sequenceShow/hide protein sequence
MASPGRGDGATDGAGSQFPAADVDRELHPGHNKHVEVDPVSSQVSESLQAKEKAKRKAADEEERKKEKKKETVQTLKTTFIVSAVIAAVAAAAFAIVKKLGQK