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Sed0011687 (gene) of Chayote v1 genome

Gene IDSed0011687
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG14:17828628..17829504
RNA-Seq ExpressionSed0011687
SyntenySed0011687
Gene Ontology termsNA
InterPro domainsIPR027854 - Short transmembrane mitochondrial protein 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7034311.1 hypothetical protein SDJN02_04038, partial [Cucurbita argyrosperma subsp. argyrosperma]1.4e-2092.98Show/hide
Query:  MGFIRSSFSLIAGTVVGIYIAQNYNVPNIRKLANTGLLMAKHIEENYRKPKKREDDD
        MG IRS FSLIAGTV+GIYIAQNYNVPNIRKLANTGL+MAKHIEENYRKPKKREDDD
Subjt:  MGFIRSSFSLIAGTVVGIYIAQNYNVPNIRKLANTGLLMAKHIEENYRKPKKREDDD
XP_022132505.1 uncharacterized protein LOC111005345 [Momordica charantia]2.3e-2089.47Show/hide
Query:  MGFIRSSFSLIAGTVVGIYIAQNYNVPNIRKLANTGLLMAKHIEENYRKPKKREDDD
        MGFIRSSFS IAGTV+GIY+AQNYNVPNIRKLANTGL++AKHIEENYRKPKKR+DDD
Subjt:  MGFIRSSFSLIAGTVVGIYIAQNYNVPNIRKLANTGLLMAKHIEENYRKPKKREDDD
XP_022949611.1 uncharacterized protein LOC111452953 [Cucurbita moschata]1.4e-2092.98Show/hide
Query:  MGFIRSSFSLIAGTVVGIYIAQNYNVPNIRKLANTGLLMAKHIEENYRKPKKREDDD
        MG IRS FSLIAGTV+GIYIAQNYNVPNIRKLANTGL+MAKHIEENYRKPKKREDDD
Subjt:  MGFIRSSFSLIAGTVVGIYIAQNYNVPNIRKLANTGLLMAKHIEENYRKPKKREDDD
XP_038882745.1 uncharacterized protein LOC120073906 [Benincasa hispida]2.1e-2192.98Show/hide
Query:  MGFIRSSFSLIAGTVVGIYIAQNYNVPNIRKLANTGLLMAKHIEENYRKPKKREDDD
        MGFIRSSFS IAGTV+GIY+AQNYNVPNIRKLANTGL+MAKHIEENYRKPKKREDDD
Subjt:  MGFIRSSFSLIAGTVVGIYIAQNYNVPNIRKLANTGLLMAKHIEENYRKPKKREDDD
XP_038882750.1 uncharacterized protein LOC120073907 [Benincasa hispida]2.3e-2091.23Show/hide
Query:  MGFIRSSFSLIAGTVVGIYIAQNYNVPNIRKLANTGLLMAKHIEENYRKPKKREDDD
        MGFIRSSFS I GTV GIY+AQNYNVPNIRKLANTGL+MAKHIEENYRKPKKREDDD
Subjt:  MGFIRSSFSLIAGTVVGIYIAQNYNVPNIRKLANTGLLMAKHIEENYRKPKKREDDD
TrEMBL top hitse value%identityAlignment
A0A6J1BSM8 uncharacterized protein LOC1110053451.1e-2089.47Show/hide
Query:  MGFIRSSFSLIAGTVVGIYIAQNYNVPNIRKLANTGLLMAKHIEENYRKPKKREDDD
        MGFIRSSFS IAGTV+GIY+AQNYNVPNIRKLANTGL++AKHIEENYRKPKKR+DDD
Subjt:  MGFIRSSFSLIAGTVVGIYIAQNYNVPNIRKLANTGLLMAKHIEENYRKPKKREDDD
A0A6J1GCJ7 uncharacterized protein LOC1114529536.6e-2192.98Show/hide
Query:  MGFIRSSFSLIAGTVVGIYIAQNYNVPNIRKLANTGLLMAKHIEENYRKPKKREDDD
        MG IRS FSLIAGTV+GIYIAQNYNVPNIRKLANTGL+MAKHIEENYRKPKKREDDD
Subjt:  MGFIRSSFSLIAGTVVGIYIAQNYNVPNIRKLANTGLLMAKHIEENYRKPKKREDDD
A0A6J1HHR2 uncharacterized protein LOC1114636302.5e-2089.47Show/hide
Query:  MGFIRSSFSLIAGTVVGIYIAQNYNVPNIRKLANTGLLMAKHIEENYRKPKKREDDD
        MGFIRSSFS I GTV GIY+AQNY+VPNIRKLANTG+LMAKHIEENYRKPKKREDDD
Subjt:  MGFIRSSFSLIAGTVVGIYIAQNYNVPNIRKLANTGLLMAKHIEENYRKPKKREDDD
A0A6J1IPG1 uncharacterized protein LOC1114787636.6e-2192.98Show/hide
Query:  MGFIRSSFSLIAGTVVGIYIAQNYNVPNIRKLANTGLLMAKHIEENYRKPKKREDDD
        MG IRS FSLIAGTV+GIYIAQNYNVPNIRKLANTGL+MAKHIEENYRKPKKREDDD
Subjt:  MGFIRSSFSLIAGTVVGIYIAQNYNVPNIRKLANTGLLMAKHIEENYRKPKKREDDD
A0A6J1KVJ8 uncharacterized protein LOC1114968252.5e-2089.47Show/hide
Query:  MGFIRSSFSLIAGTVVGIYIAQNYNVPNIRKLANTGLLMAKHIEENYRKPKKREDDD
        MGFIRSSFS I GTV GIY+AQNY+VPNIRKLANTG+LMAKHIEENYRKPKKREDDD
Subjt:  MGFIRSSFSLIAGTVVGIYIAQNYNVPNIRKLANTGLLMAKHIEENYRKPKKREDDD
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G35736.1 unknown protein4.0e-1875Show/hide
Query:  MGFIRSSFSLIAGTVVGIYIAQNYNVPNIRKLANTGLLMAKHIEENYRKPKK
        MG  RS FS I G+V G+Y+AQNYNVPNIRKL NTGL++AKH+EENYRKPKK
Subjt:  MGFIRSSFSLIAGTVVGIYIAQNYNVPNIRKLANTGLLMAKHIEENYRKPKK
AT2G35736.2 unknown protein4.0e-1875Show/hide
Query:  MGFIRSSFSLIAGTVVGIYIAQNYNVPNIRKLANTGLLMAKHIEENYRKPKK
        MG  RS FS I G+V G+Y+AQNYNVPNIRKL NTGL++AKH+EENYRKPKK
Subjt:  MGFIRSSFSLIAGTVVGIYIAQNYNVPNIRKLANTGLLMAKHIEENYRKPKK
AT4G25225.1 unknown protein1.1e-1569.09Show/hide
Query:  MGFIRSSFSLIAGTVVGIYIAQNYNVPNIRKLANTGLLMAKHIEENYRKPKKRED
        MG IRSSFS I GTV GIYIAQ YNVPNI+KL +  + MAK +EE YRKPK R+D
Subjt:  MGFIRSSFSLIAGTVVGIYIAQNYNVPNIRKLANTGLLMAKHIEENYRKPKKRED

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCTTCATCAGAAGCAGCTTCTCCCTCATTGCGGGAACTGTGGTTGGGATTTACATTGCTCAAAATTACAACGTTCCCAACATCAGGAAGCTCGCCAATACAGGGCT
TTTGATGGCCAAACACATTGAAGAGAATTACAGGAAGCCCAAGAAGAGGGAGGATGATGATTGA
mRNA sequenceShow/hide mRNA sequence
CAGAAATGGGCACGCAAATCAGGTCCGTGGAGAGCAAGAAAGCCTTCAAACCGCACCAATACAAATTGGAGAAATCGACGAAGAACCCTAATCGGAGACTAACGACTAGC
GAGTTCGAGCGATAAACCCTAATCGGAGAGTTCGAGCACTTCAACAAAGGGTTCCGGCGAAAGTTGACGCCGATGGGCTTCATCAGAAGCAGCTTCTCCCTCATTGCGGG
AACTGTGGTTGGGATTTACATTGCTCAAAATTACAACGTTCCCAACATCAGGAAGCTCGCCAATACAGGGCTTTTGATGGCCAAACACATTGAAGAGAATTACAGGAAGC
CCAAGAAGAGGGAGGATGATGATTGATTCGAAGATTTACGAGCCAGGTTCCCCTTTTCACATACTACTATTGATGAATTTCTTCTTATTTCTGGATCTGTAGCAATAGTA
CTGCTATATGTTGAAATTTTTGTGGTTATAAATTCAGGAAACTGAAATTGTTAGCTAGTAAATGAGTTTTGATATGGTAGTCGGAGTGTGGGAATTGTTCTTCTTATATG
AATGCATCATTGTTGTTTTGGGTGGTATTGTGGTTATTAAATTGGGAATAAGTCAAATCTTCTAAAACCCTAGGGATGTGTTTGATTCTCTGCAAGTATGTATCGTTTGA
ATTTGCAATCTAGCGATGCTTATTTTTTTTTAACAGTTTGATGCATTTTGTCTATAGAGTATTCTTTAATTCTGTATTTTAGAAGACATTCCTTGAGGGAAATGTGACTC
AGACGGTTTCTGTGCA
Protein sequenceShow/hide protein sequence
MGFIRSSFSLIAGTVVGIYIAQNYNVPNIRKLANTGLLMAKHIEENYRKPKKREDDD