; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0011706 (gene) of Chayote v1 genome

Gene IDSed0011706
OrganismSechium edule (Chayote v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationLG01:30209232..30210284
RNA-Seq ExpressionSed0011706
SyntenySed0011706
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022141574.1 pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like [Momordica charantia]9.8e-9353.28Show/hide
Query:  MLGKHLCFEPLWDAIESMSTEGLISLATFSSVFSGYVALIVLR---MSFKHL------------------------------------------------
        MLGK+L FEP+WDA++SM  EGL+SLATF+SVFS Y+    ++   M+F+ +                                                
Subjt:  MLGKHLCFEPLWDAIESMSTEGLISLATFSSVFSGYVALIVLR---MSFKHL------------------------------------------------

Query:  ---------------RLWMLMVVLVGWDPTNTPTYSSFLCVLLKYPDGLVEALMLYKRLKDKVCYSGFKFFKLALDECVKNGDVKVGKYLWIEIIESTHF
                       + +  MV  +GWDPTNTP Y+SFLCVLLK PDGL EAL  +KRLKDK+CY GFKFFK+ALDECVKNGD K   YLW E++ES +F
Subjt:  ---------------RLWMLMVVLVGWDPTNTPTYSSFLCVLLKYPDGLVEALMLYKRLKDKVCYSGFKFFKLALDECVKNGDVKVGKYLWIEIIESTHF

Query:  QLDTHMYNLMIALRCHKNDIDAAKRLLDKMIFNGAFPNLETYNLLFQFLLNGRMLKEASSVFDEMTKNEFVPSH---------------PNGAIKVWKYM
        Q DTHMYN MI + CH+ND DAA+RLLD+MI  GAFP++ETYNLLFQFLL  R L++AS++FDEM KNEFVPS                PNGAIKVWK M
Subjt:  QLDTHMYNLMIALRCHKNDIDAAKRLLDKMIFNGAFPNLETYNLLFQFLLNGRMLKEASSVFDEMTKNEFVPSH---------------PNGAIKVWKYM

Query:  LKNYESDLEEIGNFFILGLRDLKRLSEAVKYAHEMTDRGIILRHSTFSKLK
        LK+YESDLE+IGNF I+GL+D KRL EAVKYAHEM DRG++L+HST SKLK
Subjt:  LKNYESDLEEIGNFFILGLRDLKRLSEAVKYAHEMTDRGIILRHSTFSKLK

XP_022963446.1 pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like [Cucurbita moschata]8.0e-9555.56Show/hide
Query:  MLGKHLCFEPLWDAIESMSTEGLISLATFSSVFSGYVALIVLR---MSFKHLRLW---------------------------------------------
        MLGK+L FEP+WDA++SM  EGLISLATF+SVFS Y+    ++   +SF+ + L+                                             
Subjt:  MLGKHLCFEPLWDAIESMSTEGLISLATFSSVFSGYVALIVLR---MSFKHLRLW---------------------------------------------

Query:  ------------------MLMVVLVGWDPTNTPTYSSFLCVLLKYPDGLVEALMLYKRLKDKVCYSGFKFFKLALDECVKNGDVKVGKYLWIEIIESTHF
                          + M+  +GWDPTNTP Y+SFLC+LLK P+GL EALM +KRLKDK+CY GFKFFKLALDEC KN DVK GKYLW EIIES +F
Subjt:  ------------------MLMVVLVGWDPTNTPTYSSFLCVLLKYPDGLVEALMLYKRLKDKVCYSGFKFFKLALDECVKNGDVKVGKYLWIEIIESTHF

Query:  QLDTHMYNLMIALRCHKNDIDAAKRLLDKMIFNGAFPNLETYNLLFQFLLNGRMLKEASSVFDEMTKNEFVPSH---------------PNGAIKVWKYM
        Q DTHMYN MI L CH+ND DAA+RLLD+MI  GAFPNLETYNLLF+FLL  + L+EASS+FDEM KNEFVPSH               PNGAIKVWK M
Subjt:  QLDTHMYNLMIALRCHKNDIDAAKRLLDKMIFNGAFPNLETYNLLFQFLLNGRMLKEASSVFDEMTKNEFVPSH---------------PNGAIKVWKYM

Query:  LKNYESDLEEIGNFFILGLRDLKRLSEAVKYAHEMTDRGIILRHSTFSKLK
        +K YESDLEEIGNF I+GL+D +RL EAVKYA+EM DRGIIL+HST SKLK
Subjt:  LKNYESDLEEIGNFFILGLRDLKRLSEAVKYAHEMTDRGIILRHSTFSKLK

XP_022990962.1 pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like [Cucurbita maxima]7.5e-9354.42Show/hide
Query:  MLGKHLCFEPLWDAIESMSTEGLISLATFSSVFSGYVALIVLR---MSFKHL------------------------------------------------
        +LGK+L FEP+WDA++SM  EGLISLATF+SVFS Y+    ++   MSF+ +                                                
Subjt:  MLGKHLCFEPLWDAIESMSTEGLISLATFSSVFSGYVALIVLR---MSFKHL------------------------------------------------

Query:  ---------------RLWMLMVVLVGWDPTNTPTYSSFLCVLLKYPDGLVEALMLYKRLKDKVCYSGFKFFKLALDECVKNGDVKVGKYLWIEIIESTHF
                       + ++ M+  +GWDPTNTP Y+SFLCVLLK P+GL EALM +KRLKDK+CY GFKFFKLALDEC KN DVK GKYLW EI+ES +F
Subjt:  ---------------RLWMLMVVLVGWDPTNTPTYSSFLCVLLKYPDGLVEALMLYKRLKDKVCYSGFKFFKLALDECVKNGDVKVGKYLWIEIIESTHF

Query:  QLDTHMYNLMIALRCHKNDIDAAKRLLDKMIFNGAFPNLETYNLLFQFLLNGRMLKEASSVFDEMTKNEFVPSH---------------PNGAIKVWKYM
        Q DTHMYN MI L CH+ND DAA+R+LD+MI  G FPNLETYNLLF++LL  + L+EASS+FDEM KNEFVPSH               PNGAIKVWK M
Subjt:  QLDTHMYNLMIALRCHKNDIDAAKRLLDKMIFNGAFPNLETYNLLFQFLLNGRMLKEASSVFDEMTKNEFVPSH---------------PNGAIKVWKYM

Query:  LKNYESDLEEIGNFFILGLRDLKRLSEAVKYAHEMTDRGIILRHSTFSKLK
        +K YESDLEEI NF I+GL+D KRL EAVKYA+EM DRGIIL+HST SKLK
Subjt:  LKNYESDLEEIGNFFILGLRDLKRLSEAVKYAHEMTDRGIILRHSTFSKLK

XP_023511926.1 pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like [Cucurbita pepo subsp. pepo]4.0e-9455.27Show/hide
Query:  MLGKHLCFEPLWDAIESMSTEGLISLATFSSVFSGYVALIVLR---MSFKHL------------------------------------------------
        MLGK+L FEP+WDA++SM  EGLISLATF+SVFS Y+    ++   +SF+ +                                                
Subjt:  MLGKHLCFEPLWDAIESMSTEGLISLATFSSVFSGYVALIVLR---MSFKHL------------------------------------------------

Query:  ---------------RLWMLMVVLVGWDPTNTPTYSSFLCVLLKYPDGLVEALMLYKRLKDKVCYSGFKFFKLALDECVKNGDVKVGKYLWIEIIESTHF
                       + ++ M+  +GWDPTNTP Y+SFLCVLLK P+GL EALM +KRLKDK+CY GFKFFKLALDEC KN DVK GKYLW EI+ES +F
Subjt:  ---------------RLWMLMVVLVGWDPTNTPTYSSFLCVLLKYPDGLVEALMLYKRLKDKVCYSGFKFFKLALDECVKNGDVKVGKYLWIEIIESTHF

Query:  QLDTHMYNLMIALRCHKNDIDAAKRLLDKMIFNGAFPNLETYNLLFQFLLNGRMLKEASSVFDEMTKNEFVPSH---------------PNGAIKVWKYM
        Q DTHMYN MI L CH+ND DAA+RLLD+MI  G FPNLETYNLLF+FLL  + L+EASS+FDEM KNEFVPSH               PNGAIKVWK M
Subjt:  QLDTHMYNLMIALRCHKNDIDAAKRLLDKMIFNGAFPNLETYNLLFQFLLNGRMLKEASSVFDEMTKNEFVPSH---------------PNGAIKVWKYM

Query:  LKNYESDLEEIGNFFILGLRDLKRLSEAVKYAHEMTDRGIILRHSTFSKLK
        +K YESDLEEIGNF I+GL+D KRL EAVKYA+EM DRGIIL+HST SKLK
Subjt:  LKNYESDLEEIGNFFILGLRDLKRLSEAVKYAHEMTDRGIILRHSTFSKLK

XP_038906581.1 pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like [Benincasa hispida]4.4e-9354.42Show/hide
Query:  MLGKHLCFEPLWDAIESMSTEGLISLATFSSVFSGYVALIVLR---MSFKHL------------------------------------------------
        MLGK+L F+P+WDA++SM  EGL+SLATF SVFS Y+    ++   M+F+ +                                                
Subjt:  MLGKHLCFEPLWDAIESMSTEGLISLATFSSVFSGYVALIVLR---MSFKHL------------------------------------------------

Query:  ---------------RLWMLMVVLVGWDPTNTPTYSSFLCVLLKYPDGLVEALMLYKRLKDKVCYSGFKFFKLALDECVKNGDVKVGKYLWIEIIESTHF
                       + +  M+  +GWDPTNTP Y+SFLCVLLK PDGL EAL+ +KRLKDK CY GFKFFKLALDECVKNGD+K GKYLW EIIES +F
Subjt:  ---------------RLWMLMVVLVGWDPTNTPTYSSFLCVLLKYPDGLVEALMLYKRLKDKVCYSGFKFFKLALDECVKNGDVKVGKYLWIEIIESTHF

Query:  QLDTHMYNLMIALRCHKNDIDAAKRLLDKMIFNGAFPNLETYNLLFQFLLNGRMLKEASSVFDEMTKNEFVPSH---------------PNGAIKVWKYM
        Q DTHMYN MI L CH+ND D A+RLLD+MI  GAFPN+ETYNLLFQFLL GR L++AS+VFDEM KNEFVPS                PN A+KVWK M
Subjt:  QLDTHMYNLMIALRCHKNDIDAAKRLLDKMIFNGAFPNLETYNLLFQFLLNGRMLKEASSVFDEMTKNEFVPSH---------------PNGAIKVWKYM

Query:  LKNYESDLEEIGNFFILGLRDLKRLSEAVKYAHEMTDRGIILRHSTFSKLK
        LKNY+SDLEEIGNF I+GLRD KRL EAVKYAHEM DR I+L++ST +KLK
Subjt:  LKNYESDLEEIGNFFILGLRDLKRLSEAVKYAHEMTDRGIILRHSTFSKLK

TrEMBL top hitse value%identityAlignment
A0A0A0KTM8 Uncharacterized protein7.1e-8951.85Show/hide
Query:  MLGKHLCFEPLWDAIESMSTEGLISLATFSSVFSGYVALIVLR---MSFKHL------------------------------------------------
        MLGK+L F+P+WDA++SM +EGL+SLATF+SVFS YV    ++   M+F+ +                                                
Subjt:  MLGKHLCFEPLWDAIESMSTEGLISLATFSSVFSGYVALIVLR---MSFKHL------------------------------------------------

Query:  ---------------RLWMLMVVLVGWDPTNTPTYSSFLCVLLKYPDGLVEALMLYKRLKDKVCYSGFKFFKLALDECVKNGDVKVGKYLWIEIIESTHF
                       + +  M+  +GWDPTNTP Y+SFLCVLL+ P+GL  AL+ ++RLKDK+CY GFKFFKLALDEC+K GD+K GKYLW EII+S +F
Subjt:  ---------------RLWMLMVVLVGWDPTNTPTYSSFLCVLLKYPDGLVEALMLYKRLKDKVCYSGFKFFKLALDECVKNGDVKVGKYLWIEIIESTHF

Query:  QLDTHMYNLMIALRCHKNDIDAAKRLLDKMIFNGAFPNLETYNLLFQFLLNGRMLKEASSVFDEMTKNEFVPSH---------------PNGAIKVWKYM
        Q DT+M+N MIAL CH+ND D A+RLLD+MI  GAFPN ETYNLLFQFLL GR L++AS++FDEM KNEF+PSH               PNGAIKVWK M
Subjt:  QLDTHMYNLMIALRCHKNDIDAAKRLLDKMIFNGAFPNLETYNLLFQFLLNGRMLKEASSVFDEMTKNEFVPSH---------------PNGAIKVWKYM

Query:  LKNYESDLEEIGNFFILGLRDLKRLSEAVKYAHEMTDRGIILRHSTFSKLK
        LKNY+SDLEE GNF I+ L+D KRL EAVKYAHEM DR I L+ ST +KLK
Subjt:  LKNYESDLEEIGNFFILGLRDLKRLSEAVKYAHEMTDRGIILRHSTFSKLK

A0A5A7V509 Pentatricopeptide repeat-containing protein4.6e-8851.57Show/hide
Query:  MLGKHLCFEPLWDAIESMSTEGLISLATFSSVFSGYVALIVLR---MSFKHL------------------------------------------------
        MLGK+L F+P+WDAI+SM +EGL+SLATF+SVFS YV    ++   M+F+ +                                                
Subjt:  MLGKHLCFEPLWDAIESMSTEGLISLATFSSVFSGYVALIVLR---MSFKHL------------------------------------------------

Query:  ---------------RLWMLMVVLVGWDPTNTPTYSSFLCVLLKYPDGLVEALMLYKRLKDKVCYSGFKFFKLALDECVKNGDVKVGKYLWIEIIESTHF
                       + +  M+  +GWDPTNTP Y+SFLCVLL+ P+GL  AL+ ++RLKDK+CY GFKFFKLALDECVK GD+K GKYLW EII+  +F
Subjt:  ---------------RLWMLMVVLVGWDPTNTPTYSSFLCVLLKYPDGLVEALMLYKRLKDKVCYSGFKFFKLALDECVKNGDVKVGKYLWIEIIESTHF

Query:  QLDTHMYNLMIALRCHKNDIDAAKRLLDKMIFNGAFPNLETYNLLFQFLLNGRMLKEASSVFDEMTKNEFVPSH---------------PNGAIKVWKYM
        Q DT+M+N MIAL CH+ND D A+RLLD+MI  GAFPN ETYNLLFQFLL GR L++AS++ DEM KNEF+PSH               PNGA+KVWK M
Subjt:  QLDTHMYNLMIALRCHKNDIDAAKRLLDKMIFNGAFPNLETYNLLFQFLLNGRMLKEASSVFDEMTKNEFVPSH---------------PNGAIKVWKYM

Query:  LKNYESDLEEIGNFFILGLRDLKRLSEAVKYAHEMTDRGIILRHSTFSKLK
        LKNY+SDLEE GNF I+ L+D KRL EAVKYAHEM DR I L++ST +KLK
Subjt:  LKNYESDLEEIGNFFILGLRDLKRLSEAVKYAHEMTDRGIILRHSTFSKLK

A0A6J1CJ17 pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like4.7e-9353.28Show/hide
Query:  MLGKHLCFEPLWDAIESMSTEGLISLATFSSVFSGYVALIVLR---MSFKHL------------------------------------------------
        MLGK+L FEP+WDA++SM  EGL+SLATF+SVFS Y+    ++   M+F+ +                                                
Subjt:  MLGKHLCFEPLWDAIESMSTEGLISLATFSSVFSGYVALIVLR---MSFKHL------------------------------------------------

Query:  ---------------RLWMLMVVLVGWDPTNTPTYSSFLCVLLKYPDGLVEALMLYKRLKDKVCYSGFKFFKLALDECVKNGDVKVGKYLWIEIIESTHF
                       + +  MV  +GWDPTNTP Y+SFLCVLLK PDGL EAL  +KRLKDK+CY GFKFFK+ALDECVKNGD K   YLW E++ES +F
Subjt:  ---------------RLWMLMVVLVGWDPTNTPTYSSFLCVLLKYPDGLVEALMLYKRLKDKVCYSGFKFFKLALDECVKNGDVKVGKYLWIEIIESTHF

Query:  QLDTHMYNLMIALRCHKNDIDAAKRLLDKMIFNGAFPNLETYNLLFQFLLNGRMLKEASSVFDEMTKNEFVPSH---------------PNGAIKVWKYM
        Q DTHMYN MI + CH+ND DAA+RLLD+MI  GAFP++ETYNLLFQFLL  R L++AS++FDEM KNEFVPS                PNGAIKVWK M
Subjt:  QLDTHMYNLMIALRCHKNDIDAAKRLLDKMIFNGAFPNLETYNLLFQFLLNGRMLKEASSVFDEMTKNEFVPSH---------------PNGAIKVWKYM

Query:  LKNYESDLEEIGNFFILGLRDLKRLSEAVKYAHEMTDRGIILRHSTFSKLK
        LK+YESDLE+IGNF I+GL+D KRL EAVKYAHEM DRG++L+HST SKLK
Subjt:  LKNYESDLEEIGNFFILGLRDLKRLSEAVKYAHEMTDRGIILRHSTFSKLK

A0A6J1HG58 pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like3.9e-9555.56Show/hide
Query:  MLGKHLCFEPLWDAIESMSTEGLISLATFSSVFSGYVALIVLR---MSFKHLRLW---------------------------------------------
        MLGK+L FEP+WDA++SM  EGLISLATF+SVFS Y+    ++   +SF+ + L+                                             
Subjt:  MLGKHLCFEPLWDAIESMSTEGLISLATFSSVFSGYVALIVLR---MSFKHLRLW---------------------------------------------

Query:  ------------------MLMVVLVGWDPTNTPTYSSFLCVLLKYPDGLVEALMLYKRLKDKVCYSGFKFFKLALDECVKNGDVKVGKYLWIEIIESTHF
                          + M+  +GWDPTNTP Y+SFLC+LLK P+GL EALM +KRLKDK+CY GFKFFKLALDEC KN DVK GKYLW EIIES +F
Subjt:  ------------------MLMVVLVGWDPTNTPTYSSFLCVLLKYPDGLVEALMLYKRLKDKVCYSGFKFFKLALDECVKNGDVKVGKYLWIEIIESTHF

Query:  QLDTHMYNLMIALRCHKNDIDAAKRLLDKMIFNGAFPNLETYNLLFQFLLNGRMLKEASSVFDEMTKNEFVPSH---------------PNGAIKVWKYM
        Q DTHMYN MI L CH+ND DAA+RLLD+MI  GAFPNLETYNLLF+FLL  + L+EASS+FDEM KNEFVPSH               PNGAIKVWK M
Subjt:  QLDTHMYNLMIALRCHKNDIDAAKRLLDKMIFNGAFPNLETYNLLFQFLLNGRMLKEASSVFDEMTKNEFVPSH---------------PNGAIKVWKYM

Query:  LKNYESDLEEIGNFFILGLRDLKRLSEAVKYAHEMTDRGIILRHSTFSKLK
        +K YESDLEEIGNF I+GL+D +RL EAVKYA+EM DRGIIL+HST SKLK
Subjt:  LKNYESDLEEIGNFFILGLRDLKRLSEAVKYAHEMTDRGIILRHSTFSKLK

A0A6J1JKD0 pentatricopeptide repeat-containing protein At1g77360, mitochondrial-like3.6e-9354.42Show/hide
Query:  MLGKHLCFEPLWDAIESMSTEGLISLATFSSVFSGYVALIVLR---MSFKHL------------------------------------------------
        +LGK+L FEP+WDA++SM  EGLISLATF+SVFS Y+    ++   MSF+ +                                                
Subjt:  MLGKHLCFEPLWDAIESMSTEGLISLATFSSVFSGYVALIVLR---MSFKHL------------------------------------------------

Query:  ---------------RLWMLMVVLVGWDPTNTPTYSSFLCVLLKYPDGLVEALMLYKRLKDKVCYSGFKFFKLALDECVKNGDVKVGKYLWIEIIESTHF
                       + ++ M+  +GWDPTNTP Y+SFLCVLLK P+GL EALM +KRLKDK+CY GFKFFKLALDEC KN DVK GKYLW EI+ES +F
Subjt:  ---------------RLWMLMVVLVGWDPTNTPTYSSFLCVLLKYPDGLVEALMLYKRLKDKVCYSGFKFFKLALDECVKNGDVKVGKYLWIEIIESTHF

Query:  QLDTHMYNLMIALRCHKNDIDAAKRLLDKMIFNGAFPNLETYNLLFQFLLNGRMLKEASSVFDEMTKNEFVPSH---------------PNGAIKVWKYM
        Q DTHMYN MI L CH+ND DAA+R+LD+MI  G FPNLETYNLLF++LL  + L+EASS+FDEM KNEFVPSH               PNGAIKVWK M
Subjt:  QLDTHMYNLMIALRCHKNDIDAAKRLLDKMIFNGAFPNLETYNLLFQFLLNGRMLKEASSVFDEMTKNEFVPSH---------------PNGAIKVWKYM

Query:  LKNYESDLEEIGNFFILGLRDLKRLSEAVKYAHEMTDRGIILRHSTFSKLK
        +K YESDLEEI NF I+GL+D KRL EAVKYA+EM DRGIIL+HST SKLK
Subjt:  LKNYESDLEEIGNFFILGLRDLKRLSEAVKYAHEMTDRGIILRHSTFSKLK

SwissProt top hitse value%identityAlignment
Q8VZE4 Pentatricopeptide repeat-containing protein At4g015701.5e-0626.98Show/hide
Query:  ALMLYKRLKDKVCYSGFKFFKLALDECVKN---------GDVKVGKYLWIEIIESTHFQLDTHMYNLMIALRCHKNDIDAAKRLLDKMIFNGAFPNLETY
        AL L+K +K++    G  F     D C  N         G  K    +W E+  S H + D   Y ++I   C    +D A R+  +M +NG  P+   Y
Subjt:  ALMLYKRLKDKVCYSGFKFFKLALDECVKN---------GDVKVGKYLWIEIIESTHFQLDTHMYNLMIALRCHKNDIDAAKRLLDKMIFNGAFPNLETY

Query:  NLLFQFLLNGRMLKEASSVFDEMTKNEFVPSHPNGAIKVWKY------MLKNYES--------DLEEIGNFF------ILGLRDLK--RLSEAVKYAHEM
        N L    L  R + EA  +F++M +     S        W Y      + +N  +        DL++ G F       I+GL+  +  +L  AVK   EM
Subjt:  NLLFQFLLNGRMLKEASSVFDEMTKNEFVPSHPNGAIKVWKY------MLKNYES--------DLEEIGNFF------ILGLRDLK--RLSEAVKYAHEM

Query:  TDRGIILRHSTFSKL
          RG  +   T S L
Subjt:  TDRGIILRHSTFSKL

Q9C8T7 Pentatricopeptide repeat-containing protein At1g633309.4e-0628.26Show/hide
Query:  TYSSFLCVLLKYPDGLVEALMLYKRLKDKVCYSGFKFFKLALDECVKNGDVKVGKYLWIEIIESTHFQL--DTHMYNLMIALRCHKNDIDAAKRLLDKMI
        TY+S +     + D L +A  +++ +  K C+     +   +    K+  V+ G  L+ E+   +H  L  DT  Y  +I    H  D D A+++  +M+
Subjt:  TYSSFLCVLLKYPDGLVEALMLYKRLKDKVCYSGFKFFKLALDECVKNGDVKVGKYLWIEIIESTHFQL--DTHMYNLMIALRCHKNDIDAAKRLLDKMI

Query:  FNGAFPNLETYNLLFQFLLNGRMLKEASSVFDEMTKNE
         +G  P++ TY++L   L N   L++A  VFD M K+E
Subjt:  FNGAFPNLETYNLLFQFLLNGRMLKEASSVFDEMTKNE

Q9FMQ1 Pentatricopeptide repeat-containing protein At5g12100, mitochondrial4.1e-0925.47Show/hide
Query:  LCVLLKYPDGLVEALMLYKRLKDKVCYSGFKFFKLALDECVKNGDVKVGKYLWIEIIESTHFQLDTHMYNLMIALRCHKNDIDAAKRLLDKMIFNGAFPN
        L VLL     + EA  L+  L+++  Y       L LD  VK    +V   +++ I+ES  F+    MY   I      +D+     L ++M  +  +P+
Subjt:  LCVLLKYPDGLVEALMLYKRLKDKVCYSGFKFFKLALDECVKNGDVKVGKYLWIEIIESTHFQLDTHMYNLMIALRCHKNDIDAAKRLLDKMIFNGAFPN

Query:  LETYNLLFQFLLNGRMLKEASSVFDEMTKNEFVPS---------------HPNGAIKVWKYMLKNYESDLEEIGNFFILGLRDLKRLSEAVKYAHEMTDR
        +  YN+L   L  G+ + +A  +FDEM     +PS               +P  + KV + M  ++        N  + GL     + +A     EM D 
Subjt:  LETYNLLFQFLLNGRMLKEASSVFDEMTKNEFVPS---------------HPNGAIKVWKYMLKNYESDLEEIGNFFILGLRDLKRLSEAVKYAHEMTDR

Query:  GIILRHSTFSKL
        G +    TFS L
Subjt:  GIILRHSTFSKL

Q9SFV9 Pentatricopeptide repeat-containing protein At3g07290, mitochondrial1.6e-0526.23Show/hide
Query:  QLDTHMYNLMIALRCHKNDIDAAKRLLDKMIFNGAFPNLETYNLLFQFLLNGRMLKEASSVFDEMTKNEFVPSHPNGAIKVWKYMLKNYESDLEEIGNFF
        Q  T  Y ++I   C +  ID A  L D+MI  G  PN+ TY +L   L     ++EA+ V  +M K+   PS     +  +  ++  Y  D   +  F 
Subjt:  QLDTHMYNLMIALRCHKNDIDAAKRLLDKMIFNGAFPNLETYNLLFQFLLNGRMLKEASSVFDEMTKNEFVPSHPNGAIKVWKYMLKNYESDLEEIGNFF

Query:  ILGLRDLKRLSEAVKYAHEMTD
        +L + + +     V+  +E+ +
Subjt:  ILGLRDLKRLSEAVKYAHEMTD

Q9SXD8 Pentatricopeptide repeat-containing protein At1g625901.6e-0528.8Show/hide
Query:  DGLVEALMLYKRLKDKVCYSGFKFFKLALDECVKNGDVKVGKYLWIEIIESTHFQL--DTHMYNLMIALRCHKNDIDAAKRLLDKMIFNGAFPNLETYNL
        D L +A  +++ +  K C+     +   +    K+  V+ G  L+ E+   +H  L  DT  Y  +I    H  D D A+++  +M+ +G  P++ TY++
Subjt:  DGLVEALMLYKRLKDKVCYSGFKFFKLALDECVKNGDVKVGKYLWIEIIESTHFQL--DTHMYNLMIALRCHKNDIDAAKRLLDKMIFNGAFPNLETYNL

Query:  LFQFLLNGRMLKEASSVFDEMTKNE
        L   L N   L++A  VFD M K+E
Subjt:  LFQFLLNGRMLKEASSVFDEMTKNE

Arabidopsis top hitse value%identityAlignment
AT1G62590.1 pentatricopeptide (PPR) repeat-containing protein1.1e-0628.8Show/hide
Query:  DGLVEALMLYKRLKDKVCYSGFKFFKLALDECVKNGDVKVGKYLWIEIIESTHFQL--DTHMYNLMIALRCHKNDIDAAKRLLDKMIFNGAFPNLETYNL
        D L +A  +++ +  K C+     +   +    K+  V+ G  L+ E+   +H  L  DT  Y  +I    H  D D A+++  +M+ +G  P++ TY++
Subjt:  DGLVEALMLYKRLKDKVCYSGFKFFKLALDECVKNGDVKVGKYLWIEIIESTHFQL--DTHMYNLMIALRCHKNDIDAAKRLLDKMIFNGAFPNLETYNL

Query:  LFQFLLNGRMLKEASSVFDEMTKNE
        L   L N   L++A  VFD M K+E
Subjt:  LFQFLLNGRMLKEASSVFDEMTKNE

AT1G63330.1 Pentatricopeptide repeat (PPR) superfamily protein6.7e-0728.26Show/hide
Query:  TYSSFLCVLLKYPDGLVEALMLYKRLKDKVCYSGFKFFKLALDECVKNGDVKVGKYLWIEIIESTHFQL--DTHMYNLMIALRCHKNDIDAAKRLLDKMI
        TY+S +     + D L +A  +++ +  K C+     +   +    K+  V+ G  L+ E+   +H  L  DT  Y  +I    H  D D A+++  +M+
Subjt:  TYSSFLCVLLKYPDGLVEALMLYKRLKDKVCYSGFKFFKLALDECVKNGDVKVGKYLWIEIIESTHFQL--DTHMYNLMIALRCHKNDIDAAKRLLDKMI

Query:  FNGAFPNLETYNLLFQFLLNGRMLKEASSVFDEMTKNE
         +G  P++ TY++L   L N   L++A  VFD M K+E
Subjt:  FNGAFPNLETYNLLFQFLLNGRMLKEASSVFDEMTKNE

AT1G77340.1 Pentatricopeptide repeat (PPR) superfamily protein8.8e-0727.87Show/hide
Query:  EALMLYKRLKDKVCYSGFKFFKLALDECVKNGDVKVGKYLWIEIIESTHFQLDTHMYNLMIALRCHKNDIDAAKRLLDKMIFNGAFPNLETYNLLFQFLL
        EAL L  ++KD  C    + + + +D    +G       L+ ++ ES   + D  MY ++I   C  + +D A  LL+ M+ NG  PN+ TYN L +   
Subjt:  EALMLYKRLKDKVCYSGFKFFKLALDECVKNGDVKVGKYLWIEIIESTHFQLDTHMYNLMIALRCHKNDIDAAKRLLDKMIFNGAFPNLETYNLLFQFLL

Query:  NGRMLKEASSVFDEMTKNEFVP
          + + +A  +  +M +   VP
Subjt:  NGRMLKEASSVFDEMTKNEFVP

AT4G01570.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.0e-0726.98Show/hide
Query:  ALMLYKRLKDKVCYSGFKFFKLALDECVKN---------GDVKVGKYLWIEIIESTHFQLDTHMYNLMIALRCHKNDIDAAKRLLDKMIFNGAFPNLETY
        AL L+K +K++    G  F     D C  N         G  K    +W E+  S H + D   Y ++I   C    +D A R+  +M +NG  P+   Y
Subjt:  ALMLYKRLKDKVCYSGFKFFKLALDECVKN---------GDVKVGKYLWIEIIESTHFQLDTHMYNLMIALRCHKNDIDAAKRLLDKMIFNGAFPNLETY

Query:  NLLFQFLLNGRMLKEASSVFDEMTKNEFVPSHPNGAIKVWKY------MLKNYES--------DLEEIGNFF------ILGLRDLK--RLSEAVKYAHEM
        N L    L  R + EA  +F++M +     S        W Y      + +N  +        DL++ G F       I+GL+  +  +L  AVK   EM
Subjt:  NLLFQFLLNGRMLKEASSVFDEMTKNEFVPSHPNGAIKVWKY------MLKNYES--------DLEEIGNFF------ILGLRDLK--RLSEAVKYAHEM

Query:  TDRGIILRHSTFSKL
          RG  +   T S L
Subjt:  TDRGIILRHSTFSKL

AT5G12100.1 pentatricopeptide (PPR) repeat-containing protein2.9e-1025.47Show/hide
Query:  LCVLLKYPDGLVEALMLYKRLKDKVCYSGFKFFKLALDECVKNGDVKVGKYLWIEIIESTHFQLDTHMYNLMIALRCHKNDIDAAKRLLDKMIFNGAFPN
        L VLL     + EA  L+  L+++  Y       L LD  VK    +V   +++ I+ES  F+    MY   I      +D+     L ++M  +  +P+
Subjt:  LCVLLKYPDGLVEALMLYKRLKDKVCYSGFKFFKLALDECVKNGDVKVGKYLWIEIIESTHFQLDTHMYNLMIALRCHKNDIDAAKRLLDKMIFNGAFPN

Query:  LETYNLLFQFLLNGRMLKEASSVFDEMTKNEFVPS---------------HPNGAIKVWKYMLKNYESDLEEIGNFFILGLRDLKRLSEAVKYAHEMTDR
        +  YN+L   L  G+ + +A  +FDEM     +PS               +P  + KV + M  ++        N  + GL     + +A     EM D 
Subjt:  LETYNLLFQFLLNGRMLKEASSVFDEMTKNEFVPS---------------HPNGAIKVWKYMLKNYESDLEEIGNFFILGLRDLKRLSEAVKYAHEMTDR

Query:  GIILRHSTFSKL
        G +    TFS L
Subjt:  GIILRHSTFSKL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGGTAAGCATTTATGTTTTGAACCATTGTGGGATGCTATAGAATCCATGAGCACTGAAGGGCTCATTTCTTTGGCCACTTTTTCTTCCGTGTTTAGTGGTTATGT
TGCACTCATCGTGTTAAGGATGTCATTCAAGCATTTGAGGTTATGGATGCTTATGGTTGTTCTCGTTGGTTGGGATCCGACCAATACCCCTACTTATAGTTCCTTTTTAT
GTGTATTGCTGAAGTACCCCGATGGATTGGTCGAGGCATTGATGTTATACAAGAGATTAAAGGATAAGGTGTGCTATTCGGGGTTTAAGTTTTTCAAGCTTGCCCTTGAT
GAGTGTGTAAAGAATGGCGACGTCAAAGTGGGGAAGTACCTTTGGATTGAAATCATAGAGAGTACTCATTTCCAGCTTGATACACACATGTACAATTTGATGATTGCTTT
AAGATGTCATAAAAATGACATTGATGCAGCAAAAAGACTGTTAGATAAGATGATATTTAATGGGGCATTTCCAAATTTGGAAACTTACAATTTGTTATTTCAGTTCTTAT
TAAACGGAAGAATGTTGAAGGAGGCTTCCAGTGTATTTGATGAAATGACAAAAAATGAGTTTGTTCCGAGCCATCCAAATGGGGCCATAAAAGTATGGAAATATATGCTT
AAAAACTATGAATCTGATCTTGAAGAGATTGGTAATTTCTTTATTCTAGGACTTCGAGATCTAAAGAGGTTGTCAGAAGCAGTTAAATATGCTCATGAGATGACTGATAG
AGGAATCATATTAAGACATTCGACTTTTTCCAAACTAAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGTTGGGTAAGCATTTATGTTTTGAACCATTGTGGGATGCTATAGAATCCATGAGCACTGAAGGGCTCATTTCTTTGGCCACTTTTTCTTCCGTGTTTAGTGGTTATGT
TGCACTCATCGTGTTAAGGATGTCATTCAAGCATTTGAGGTTATGGATGCTTATGGTTGTTCTCGTTGGTTGGGATCCGACCAATACCCCTACTTATAGTTCCTTTTTAT
GTGTATTGCTGAAGTACCCCGATGGATTGGTCGAGGCATTGATGTTATACAAGAGATTAAAGGATAAGGTGTGCTATTCGGGGTTTAAGTTTTTCAAGCTTGCCCTTGAT
GAGTGTGTAAAGAATGGCGACGTCAAAGTGGGGAAGTACCTTTGGATTGAAATCATAGAGAGTACTCATTTCCAGCTTGATACACACATGTACAATTTGATGATTGCTTT
AAGATGTCATAAAAATGACATTGATGCAGCAAAAAGACTGTTAGATAAGATGATATTTAATGGGGCATTTCCAAATTTGGAAACTTACAATTTGTTATTTCAGTTCTTAT
TAAACGGAAGAATGTTGAAGGAGGCTTCCAGTGTATTTGATGAAATGACAAAAAATGAGTTTGTTCCGAGCCATCCAAATGGGGCCATAAAAGTATGGAAATATATGCTT
AAAAACTATGAATCTGATCTTGAAGAGATTGGTAATTTCTTTATTCTAGGACTTCGAGATCTAAAGAGGTTGTCAGAAGCAGTTAAATATGCTCATGAGATGACTGATAG
AGGAATCATATTAAGACATTCGACTTTTTCCAAACTAAAATAG
Protein sequenceShow/hide protein sequence
MLGKHLCFEPLWDAIESMSTEGLISLATFSSVFSGYVALIVLRMSFKHLRLWMLMVVLVGWDPTNTPTYSSFLCVLLKYPDGLVEALMLYKRLKDKVCYSGFKFFKLALD
ECVKNGDVKVGKYLWIEIIESTHFQLDTHMYNLMIALRCHKNDIDAAKRLLDKMIFNGAFPNLETYNLLFQFLLNGRMLKEASSVFDEMTKNEFVPSHPNGAIKVWKYML
KNYESDLEEIGNFFILGLRDLKRLSEAVKYAHEMTDRGIILRHSTFSKLK