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Sed0011708 (gene) of Chayote v1 genome

Gene IDSed0011708
OrganismSechium edule (Chayote v1)
DescriptionCalcium-binding EF-hand family protein
Genome locationLG04:43005629..43006432
RNA-Seq ExpressionSed0011708
SyntenySed0011708
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589130.1 hypothetical protein SDJN03_17695, partial [Cucurbita argyrosperma subsp. sororia]1.7e-6189.05Show/hide
Query:  MSVEVLDGITIVNFVEDDEVFGATVRERFRHLDIDRDGVLSYDEMLRELQRLRVFESHFGIDVKPDPDELSSAYGSLFSQFDRDCNGKVDLGEFMEETKK
        MSVE+LDG TIVNFVEDDEVFGA VRERF HLDID DGVLSY+EMLRELQ LRVFE+HFGIDVKPDPDELSS YGSLF QFDRDCNGKVD+GEFMEETKK
Subjt:  MSVEVLDGITIVNFVEDDEVFGATVRERFRHLDIDRDGVLSYDEMLRELQRLRVFESHFGIDVKPDPDELSSAYGSLFSQFDRDCNGKVDLGEFMEETKK

Query:  MMLAMANGIGFSPVQMVLEENSFLKKAVERESAKVGA
        MM+AMANGIGFSPVQMVLEENS LK+AVERES KVGA
Subjt:  MMLAMANGIGFSPVQMVLEENSFLKKAVERESAKVGA

XP_022930660.1 uncharacterized protein LOC111437061 [Cucurbita moschata]2.9e-6189.05Show/hide
Query:  MSVEVLDGITIVNFVEDDEVFGATVRERFRHLDIDRDGVLSYDEMLRELQRLRVFESHFGIDVKPDPDELSSAYGSLFSQFDRDCNGKVDLGEFMEETKK
        MSVE+LD  TIVNFVEDDEVFGA VRERF HLDID DGVLSY+EMLRELQ LRVFE+HFGIDVKPDPDELSS YGSLF QFDRDC+GKVD+GEFMEETKK
Subjt:  MSVEVLDGITIVNFVEDDEVFGATVRERFRHLDIDRDGVLSYDEMLRELQRLRVFESHFGIDVKPDPDELSSAYGSLFSQFDRDCNGKVDLGEFMEETKK

Query:  MMLAMANGIGFSPVQMVLEENSFLKKAVERESAKVGA
        MM+AMANGIGFSPVQMVLEENSFLKKAVERES KVGA
Subjt:  MMLAMANGIGFSPVQMVLEENSFLKKAVERESAKVGA

XP_022989006.1 uncharacterized protein LOC111486199 [Cucurbita maxima]1.9e-6089.05Show/hide
Query:  MSVEVLDGITIVNFVEDDEVFGATVRERFRHLDIDRDGVLSYDEMLRELQRLRVFESHFGIDVKPDPDELSSAYGSLFSQFDRDCNGKVDLGEFMEETKK
        MSVE+LDG TIVNFVEDDEVFGA VRERF HLDID DGVLSY+EMLRELQ LRVFE+HFGIDVKPDPDELSS YGSLF QFDRD +GKVD+GEFMEETKK
Subjt:  MSVEVLDGITIVNFVEDDEVFGATVRERFRHLDIDRDGVLSYDEMLRELQRLRVFESHFGIDVKPDPDELSSAYGSLFSQFDRDCNGKVDLGEFMEETKK

Query:  MMLAMANGIGFSPVQMVLEENSFLKKAVERESAKVGA
        MM+AMANGIGFSPVQMVLEENSFLKKAVERES KVGA
Subjt:  MMLAMANGIGFSPVQMVLEENSFLKKAVERESAKVGA

XP_023529817.1 uncharacterized protein LOC111792531 [Cucurbita pepo subsp. pepo]3.8e-6189.78Show/hide
Query:  MSVEVLDGITIVNFVEDDEVFGATVRERFRHLDIDRDGVLSYDEMLRELQRLRVFESHFGIDVKPDPDELSSAYGSLFSQFDRDCNGKVDLGEFMEETKK
        MSVE+LDG TIVNFVEDDEVFGA VRERF HLDID DGVLSY+EMLRELQ LRVFE+HFGIDVKPDPDELSS YGSLF QFDRD NGKVD+GEFMEETKK
Subjt:  MSVEVLDGITIVNFVEDDEVFGATVRERFRHLDIDRDGVLSYDEMLRELQRLRVFESHFGIDVKPDPDELSSAYGSLFSQFDRDCNGKVDLGEFMEETKK

Query:  MMLAMANGIGFSPVQMVLEENSFLKKAVERESAKVGA
        MM+AMANGIGFSPVQMVLEENSFLKKAVERES KVGA
Subjt:  MMLAMANGIGFSPVQMVLEENSFLKKAVERESAKVGA

XP_023529818.1 uncharacterized protein LOC111792532 [Cucurbita pepo subsp. pepo]1.9e-6088.32Show/hide
Query:  MSVEVLDGITIVNFVEDDEVFGATVRERFRHLDIDRDGVLSYDEMLRELQRLRVFESHFGIDVKPDPDELSSAYGSLFSQFDRDCNGKVDLGEFMEETKK
        MSVE+LDG TIVNFVEDDEVFGA VRERF HLDID DGVLSY+EMLRELQ LRVFE+HFGIDVKPDPDELSS YGSLF QFDRDCNGKVD+GEFMEETKK
Subjt:  MSVEVLDGITIVNFVEDDEVFGATVRERFRHLDIDRDGVLSYDEMLRELQRLRVFESHFGIDVKPDPDELSSAYGSLFSQFDRDCNGKVDLGEFMEETKK

Query:  MMLAMANGIGFSPVQMVLEENSFLKKAVERESAKVGA
        MM+AMANGIG  PVQMVLEENS LKKAVERES KVGA
Subjt:  MMLAMANGIGFSPVQMVLEENSFLKKAVERESAKVGA

TrEMBL top hitse value%identityAlignment
A0A0A0K1Y0 Calcium ion binding protein5.8e-5579.56Show/hide
Query:  MSVEVLDGITIVNFVEDDEVFGATVRERFRHLDIDRDGVLSYDEMLRELQRLRVFESHFGIDVKPDPDELSSAYGSLFSQFDRDCNGKVDLGEFMEETKK
        MSVE+L+  TI+NFVED+E F   +RERF HLDIDRDGVL Y EML+ELQ LRV E+HFGID KPDP+ELSS YGSLF QFDRDCNGKVDLGEFMEETKK
Subjt:  MSVEVLDGITIVNFVEDDEVFGATVRERFRHLDIDRDGVLSYDEMLRELQRLRVFESHFGIDVKPDPDELSSAYGSLFSQFDRDCNGKVDLGEFMEETKK

Query:  MMLAMANGIGFSPVQMVLEENSFLKKAVERESAKVGA
        MMLAMANGIG SPVQM+LEENSFLKKAV+RES K+ A
Subjt:  MMLAMANGIGFSPVQMVLEENSFLKKAVERESAKVGA

A0A6J1C2G7 uncharacterized protein LOC1110078494.0e-5681.75Show/hide
Query:  MSVEVLDGITIVNFVEDDEVFGATVRERFRHLDIDRDGVLSYDEMLRELQRLRVFESHFGIDVKPDPDELSSAYGSLFSQFDRDCNGKVDLGEFMEETKK
        MSVE+LDG TIV+FVED+EVFGATV+ERF HLD DRDGVLSY EMLRELQ LRV E+HFGIDVKPDPDE+S+ YGSLF  FDRDCNGKVDLGEFM ETKK
Subjt:  MSVEVLDGITIVNFVEDDEVFGATVRERFRHLDIDRDGVLSYDEMLRELQRLRVFESHFGIDVKPDPDELSSAYGSLFSQFDRDCNGKVDLGEFMEETKK

Query:  MMLAMANGIGFSPVQMVLEENSFLKKAVERESAKVGA
        MMLAMANGIG  P+QMVLEEN FLKKAVERE+ K+ A
Subjt:  MMLAMANGIGFSPVQMVLEENSFLKKAVERESAKVGA

A0A6J1EXF9 uncharacterized protein LOC1114370611.4e-6189.05Show/hide
Query:  MSVEVLDGITIVNFVEDDEVFGATVRERFRHLDIDRDGVLSYDEMLRELQRLRVFESHFGIDVKPDPDELSSAYGSLFSQFDRDCNGKVDLGEFMEETKK
        MSVE+LD  TIVNFVEDDEVFGA VRERF HLDID DGVLSY+EMLRELQ LRVFE+HFGIDVKPDPDELSS YGSLF QFDRDC+GKVD+GEFMEETKK
Subjt:  MSVEVLDGITIVNFVEDDEVFGATVRERFRHLDIDRDGVLSYDEMLRELQRLRVFESHFGIDVKPDPDELSSAYGSLFSQFDRDCNGKVDLGEFMEETKK

Query:  MMLAMANGIGFSPVQMVLEENSFLKKAVERESAKVGA
        MM+AMANGIGFSPVQMVLEENSFLKKAVERES KVGA
Subjt:  MMLAMANGIGFSPVQMVLEENSFLKKAVERESAKVGA

A0A6J1JEK7 uncharacterized protein LOC1114862001.0e-5987.59Show/hide
Query:  MSVEVLDGITIVNFVEDDEVFGATVRERFRHLDIDRDGVLSYDEMLRELQRLRVFESHFGIDVKPDPDELSSAYGSLFSQFDRDCNGKVDLGEFMEETKK
        MSVE+LDG TIVNFVEDDEVFGA VRERF HLDID DGVLSY+EMLRELQ LRVFE+HFGIDVKPDPDELSS YGSLF QFDRD +GKVD+GEFMEETKK
Subjt:  MSVEVLDGITIVNFVEDDEVFGATVRERFRHLDIDRDGVLSYDEMLRELQRLRVFESHFGIDVKPDPDELSSAYGSLFSQFDRDCNGKVDLGEFMEETKK

Query:  MMLAMANGIGFSPVQMVLEENSFLKKAVERESAKVGA
        MM+AMANGIG SPVQMVLEENS LKKAVERES KVGA
Subjt:  MMLAMANGIGFSPVQMVLEENSFLKKAVERESAKVGA

A0A6J1JIT4 uncharacterized protein LOC1114861999.2e-6189.05Show/hide
Query:  MSVEVLDGITIVNFVEDDEVFGATVRERFRHLDIDRDGVLSYDEMLRELQRLRVFESHFGIDVKPDPDELSSAYGSLFSQFDRDCNGKVDLGEFMEETKK
        MSVE+LDG TIVNFVEDDEVFGA VRERF HLDID DGVLSY+EMLRELQ LRVFE+HFGIDVKPDPDELSS YGSLF QFDRD +GKVD+GEFMEETKK
Subjt:  MSVEVLDGITIVNFVEDDEVFGATVRERFRHLDIDRDGVLSYDEMLRELQRLRVFESHFGIDVKPDPDELSSAYGSLFSQFDRDCNGKVDLGEFMEETKK

Query:  MMLAMANGIGFSPVQMVLEENSFLKKAVERESAKVGA
        MM+AMANGIGFSPVQMVLEENSFLKKAVERES KVGA
Subjt:  MMLAMANGIGFSPVQMVLEENSFLKKAVERESAKVGA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G54530.1 Calcium-binding EF hand family protein3.0e-1132.81Show/hide
Query:  VLDGITIVNFVEDDEVFGATVRERFRHLDIDRDGVLSYDEMLRELQRLRVFESHFGIDVKPDPDELSSAYGSLFSQFDRDCNGKVDLGEFMEETKKMMLA
        V+   T++ F+ D + F +   + F+ LD+D++G+LS  E+ + L  +   ES    +V P  DE  + Y ++F +F  D   K     F +   +++ A
Subjt:  VLDGITIVNFVEDDEVFGATVRERFRHLDIDRDGVLSYDEMLRELQRLRVFESHFGIDVKPDPDELSSAYGSLFSQFDRDCNGKVDLGEFMEETKKMMLA

Query:  MANGIGFSPVQMVLEENSFLKKAVERES
        MA GIG SPV MV+  +  + KAV  ES
Subjt:  MANGIGFSPVQMVLEENSFLKKAVERES

AT2G44310.1 Calcium-binding EF-hand family protein7.5e-3146.72Show/hide
Query:  MSVEVLDGITIVNFVEDDEVFGATVRERFRHLDIDRDGVLSYDEMLRELQRLRVFESHFGIDVKPDPDELSSAYGSLFSQFDRDCNGKVDLGEFMEETKK
        M V ++DG T+ +FV+D+E F  +V ERF  LD+++DGVLS  E+ +  + +R+ ESHFG+DV    DEL++ Y S+F +FD D +G VDL EF  E KK
Subjt:  MSVEVLDGITIVNFVEDDEVFGATVRERFRHLDIDRDGVLSYDEMLRELQRLRVFESHFGIDVKPDPDELSSAYGSLFSQFDRDCNGKVDLGEFMEETKK

Query:  MMLAMANGIGFSPVQMVL--EENSFLKKAVERESAKV
        ++LA+A+G+G  P+ MVL  ++++FLKKA + E++K+
Subjt:  MMLAMANGIGFSPVQMVL--EENSFLKKAVERESAKV

AT4G38810.2 Calcium-binding EF-hand family protein1.1e-0829.6Show/hide
Query:  EVLDGITIVNFVEDDEVFGATVRERFRHLDIDRDGVLSYDEMLRELQRLRVFESHFGIDVKPDPDELSSAYGSLFSQFDRDCNGKVDLGEFMEETKKMML
        +VLDG  IV  VE+++VF   V ++F+ LD D DG LS  E+   +  +            PD D +   Y  + ++F      KV   EF E    ++L
Subjt:  EVLDGITIVNFVEDDEVFGATVRERFRHLDIDRDGVLSYDEMLRELQRLRVFESHFGIDVKPDPDELSSAYGSLFSQFDRDCNGKVDLGEFMEETKKMML

Query:  AMANGIGFSPVQMVLEENSFLKKAV
         MA G+   P+ ++  +   L + V
Subjt:  AMANGIGFSPVQMVLEENSFLKKAV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCGTAGAAGTTTTGGATGGTATCACCATTGTCAATTTTGTAGAAGACGACGAAGTTTTCGGTGCGACGGTTAGGGAGCGTTTCCGTCACCTCGACATCGATCGAGA
TGGAGTTCTTTCTTACGACGAGATGCTGAGGGAGTTGCAAAGGCTTAGGGTGTTTGAATCCCATTTCGGAATCGATGTGAAACCTGACCCGGACGAGCTTTCTTCGGCTT
ACGGCTCGTTGTTCTCTCAATTCGATCGAGATTGCAATGGAAAAGTTGATCTAGGCGAGTTCATGGAAGAAACTAAGAAGATGATGTTGGCAATGGCAAATGGAATAGGG
TTTTCGCCAGTTCAAATGGTGTTGGAAGAGAATAGCTTTTTGAAGAAAGCTGTGGAGAGGGAATCTGCCAAAGTGGGTGCTTAA
mRNA sequenceShow/hide mRNA sequence
GTAATTCTATGGGATTTCTCAAAACTTGCTTCTCGAGTCCGACCAACCAATAGTAGTGAAGTCAGAAACATGAAGAAAAAAAAACCAACGGCTAAAAACCTAAAAAGACA
CAAATTTCCTTAAACAACGCGCAAAAATCTCTCATTGCCACAATGACAAAGCTCTCTTTTTTTTACCCCTATATATATCAAAAAGAACTTCCACTTCATCACAAAATCAC
AATCTTCTTTCTCCTCTTTAATTTCGTGATAATTAATTCAAAATGAGCGTAGAAGTTTTGGATGGTATCACCATTGTCAATTTTGTAGAAGACGACGAAGTTTTCGGTGC
GACGGTTAGGGAGCGTTTCCGTCACCTCGACATCGATCGAGATGGAGTTCTTTCTTACGACGAGATGCTGAGGGAGTTGCAAAGGCTTAGGGTGTTTGAATCCCATTTCG
GAATCGATGTGAAACCTGACCCGGACGAGCTTTCTTCGGCTTACGGCTCGTTGTTCTCTCAATTCGATCGAGATTGCAATGGAAAAGTTGATCTAGGCGAGTTCATGGAA
GAAACTAAGAAGATGATGTTGGCAATGGCAAATGGAATAGGGTTTTCGCCAGTTCAAATGGTGTTGGAAGAGAATAGCTTTTTGAAGAAAGCTGTGGAGAGGGAATCTGC
CAAAGTGGGTGCTTAATTAATTGCAAAGTCTTTTATTTATTTTTTTTACATTTTGTGTTGTTGAGTGTTAATTAATTAATTGCGTTAATTTTGATTTTCTATATAAGGAT
AATTAAATTTGATCATCACATTGTTGAAGAAAAA
Protein sequenceShow/hide protein sequence
MSVEVLDGITIVNFVEDDEVFGATVRERFRHLDIDRDGVLSYDEMLRELQRLRVFESHFGIDVKPDPDELSSAYGSLFSQFDRDCNGKVDLGEFMEETKKMMLAMANGIG
FSPVQMVLEENSFLKKAVERESAKVGA