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Sed0011742 (gene) of Chayote v1 genome

Gene IDSed0011742
OrganismSechium edule (Chayote v1)
DescriptionBnaC03g34390D protein
Genome locationLG10:34056867..34057160
RNA-Seq ExpressionSed0011742
SyntenySed0011742
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6592309.1 hypothetical protein SDJN03_14655, partial [Cucurbita argyrosperma subsp. sororia]4.0e-2874.16Show/hide
Query:  MGGNKQ-KKSHSSFSIFSFFRFRKSRKGDLYDHNSSWDEMSSSSKVWRSDEDKAHRWVAEPGIDRKAKDYIDKIYQNRVSETERQIVTI
        MGGN Q KKSHSSFSIF+FF+FRK RK D YDH   W++M  S KVW SDEDK HRWVAEPGIDRKAKDYIDKIY+NR+ E+ERQ VT+
Subjt:  MGGNKQ-KKSHSSFSIFSFFRFRKSRKGDLYDHNSSWDEMSSSSKVWRSDEDKAHRWVAEPGIDRKAKDYIDKIYQNRVSETERQIVTI

KAG6592311.1 hypothetical protein SDJN03_14657, partial [Cucurbita argyrosperma subsp. sororia]3.0e-2873.56Show/hide
Query:  GGNKQKKSHSSFSIFSFFRFRKSRKGDLYDHNSSWDEMSSSSKVWRSDEDKAHRWVAEPGIDRKAKDYIDKIYQNRVSETERQIVTI
        G N+ KKSHSSFSIF+FF+FRK RK D YDH   W+EM  S KVW SDEDK HRWVAEPGIDRKAKDYIDKIY+NR+ E+ERQ VT+
Subjt:  GGNKQKKSHSSFSIFSFFRFRKSRKGDLYDHNSSWDEMSSSSKVWRSDEDKAHRWVAEPGIDRKAKDYIDKIYQNRVSETERQIVTI

KAG6592313.1 hypothetical protein SDJN03_14659, partial [Cucurbita argyrosperma subsp. sororia]3.0e-2873.56Show/hide
Query:  GGNKQKKSHSSFSIFSFFRFRKSRKGDLYDHNSSWDEMSSSSKVWRSDEDKAHRWVAEPGIDRKAKDYIDKIYQNRVSETERQIVTI
        G N+ KKSHSSFSIF+FF+FRK RK D YDH   W+EM  S KVW SDEDK HRWVAEPGIDRKAKDYIDKIY+NR+ E+ERQ VT+
Subjt:  GGNKQKKSHSSFSIFSFFRFRKSRKGDLYDHNSSWDEMSSSSKVWRSDEDKAHRWVAEPGIDRKAKDYIDKIYQNRVSETERQIVTI

KGN45870.1 hypothetical protein Csa_004960 [Cucumis sativus]5.5e-3073.2Show/hide
Query:  MGGNKQKKSHSSFSIFSFFRFRKSRKGDLYDHNSSW-DEMSSSSKVWRSDEDKAHRWVAEPGIDRKAKDYIDKIYQNRVSETERQIVTIHP--MKSN
        MGGN+QKKSHSSFSIFSFF+ ++ RKGD YDH  +W DEM  S+KVW SDEDKAH W+AEPGIDRKAKDYID+IY+NRV E+ERQ VTI P   KSN
Subjt:  MGGNKQKKSHSSFSIFSFFRFRKSRKGDLYDHNSSW-DEMSSSSKVWRSDEDKAHRWVAEPGIDRKAKDYIDKIYQNRVSETERQIVTIHP--MKSN

KGN45873.1 hypothetical protein Csa_005148 [Cucumis sativus]5.5e-3067.71Show/hide
Query:  GGNKQKKSHSSFSIFSFFRFRKSRKGDLYDHNSSWDEMSSSSKVWRSDEDKAHRWVAEPGIDRKAKDYIDKIYQNRVSETERQIVTIHPMKSNHDM
        G ++QKK+HSSFSIFSFF+ ++ RKGD+Y+H ++W+++ SSSKVW SDEDK +RWVAEPGIDRKAKDYID+IY+NRV ETERQ VTIHP   N ++
Subjt:  GGNKQKKSHSSFSIFSFFRFRKSRKGDLYDHNSSWDEMSSSSKVWRSDEDKAHRWVAEPGIDRKAKDYIDKIYQNRVSETERQIVTIHPMKSNHDM

TrEMBL top hitse value%identityAlignment
A0A0A0K7Y2 Uncharacterized protein2.7e-3073.2Show/hide
Query:  MGGNKQKKSHSSFSIFSFFRFRKSRKGDLYDHNSSW-DEMSSSSKVWRSDEDKAHRWVAEPGIDRKAKDYIDKIYQNRVSETERQIVTIHP--MKSN
        MGGN+QKKSHSSFSIFSFF+ ++ RKGD YDH  +W DEM  S+KVW SDEDKAH W+AEPGIDRKAKDYID+IY+NRV E+ERQ VTI P   KSN
Subjt:  MGGNKQKKSHSSFSIFSFFRFRKSRKGDLYDHNSSW-DEMSSSSKVWRSDEDKAHRWVAEPGIDRKAKDYIDKIYQNRVSETERQIVTIHP--MKSN

A0A0A0K8V3 Uncharacterized protein9.5e-2875.28Show/hide
Query:  MGGNKQKKSHSSFSIFSFFRFRKSRKGDLYDHNSSW-DEMSSSSKVWRSDEDKAHRWVAEPGIDRKAKDYIDKIYQNRVSETERQIVTI
        MGG+K KKSHSSFS FSF + + SRKGD YDH  SW DE S S KVW SDEDKAH WVAEPGIDRKAKDYID+IY+NRV E+ERQ VTI
Subjt:  MGGNKQKKSHSSFSIFSFFRFRKSRKGDLYDHNSSW-DEMSSSSKVWRSDEDKAHRWVAEPGIDRKAKDYIDKIYQNRVSETERQIVTI

A0A0A0K8W0 Uncharacterized protein2.7e-3067.71Show/hide
Query:  GGNKQKKSHSSFSIFSFFRFRKSRKGDLYDHNSSWDEMSSSSKVWRSDEDKAHRWVAEPGIDRKAKDYIDKIYQNRVSETERQIVTIHPMKSNHDM
        G ++QKK+HSSFSIFSFF+ ++ RKGD+Y+H ++W+++ SSSKVW SDEDK +RWVAEPGIDRKAKDYID+IY+NRV ETERQ VTIHP   N ++
Subjt:  GGNKQKKSHSSFSIFSFFRFRKSRKGDLYDHNSSWDEMSSSSKVWRSDEDKAHRWVAEPGIDRKAKDYIDKIYQNRVSETERQIVTIHPMKSNHDM

A0A0A0KBW1 Uncharacterized protein9.2e-3175.26Show/hide
Query:  MGGNKQKKSHSSFSIFSFFRFRKSRKGDLYDHNSSW-DEMSSSSKVWRSDEDKAHRWVAEPGIDRKAKDYIDKIYQNRVSETERQIVTIHP--MKSN
        MGGN+QKKSHSSFSIFSFF+ R+ RKGD YDH  +W DEM  S+KVW SDEDKAH WVAEPGIDRKAKDYID+IY+NRV E+ERQ VTI P   KSN
Subjt:  MGGNKQKKSHSSFSIFSFFRFRKSRKGDLYDHNSSW-DEMSSSSKVWRSDEDKAHRWVAEPGIDRKAKDYIDKIYQNRVSETERQIVTIHP--MKSN

A0A5A7SYN4 Uncharacterized protein8.1e-2773.03Show/hide
Query:  MGGNKQKKSHSSFSIFSFFRFRKSRKGDLYDHNSSW-DEMSSSSKVWRSDEDKAHRWVAEPGIDRKAKDYIDKIYQNRVSETERQIVTI
        MGG+K KKSHSSFS FSFF+ + S+K D YDH  SW D+ S S KVW SDEDKAH WVAEPGIDRKAKDYID+IY+NRV E+ERQ VTI
Subjt:  MGGNKQKKSHSSFSIFSFFRFRKSRKGDLYDHNSSW-DEMSSSSKVWRSDEDKAHRWVAEPGIDRKAKDYIDKIYQNRVSETERQIVTI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G05858.1 unknown protein2.7e-1447.31Show/hide
Query:  MGGNKQKKSHSSFSIFSFFRFRKSRKGDLYDHNSSWDEMSSSSKVWRSDEDKAHRWVAEPGIDRKAKDYIDKIYQNRVSETERQIVTIHPMKS
        MGG  +  S   FS+FSFF+ R+S +    + + SWD+   + K   SDEDK + WVAEPGIDRKA  +I K +  RVSE+ERQ  T+ P +S
Subjt:  MGGNKQKKSHSSFSIFSFFRFRKSRKGDLYDHNSSWDEMSSSSKVWRSDEDKAHRWVAEPGIDRKAKDYIDKIYQNRVSETERQIVTIHPMKS

AT5G26620.1 unknown protein2.5e-1254.69Show/hide
Query:  NSSWDEMSSSSKVWRSDEDKAHRWVAEPGIDRKAKDYIDKIYQNRVSETERQIVTIHPMKSNHD
        ++SWD++  + K W SDEDK + WVAEPGIDRKA  +I K + +RVSE+ERQ  T+ P +S+HD
Subjt:  NSSWDEMSSSSKVWRSDEDKAHRWVAEPGIDRKAKDYIDKIYQNRVSETERQIVTIHPMKSNHD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGGAAACAAGCAAAAAAAATCACACTCTTCCTTCTCAATCTTTAGCTTTTTTAGATTTAGAAAAAGTAGAAAAGGAGATCTTTACGACCACAACAGCTCGTGGGA
TGAGATGTCGAGTTCGAGTAAGGTGTGGCGAAGTGATGAGGACAAAGCTCATCGTTGGGTCGCCGAACCCGGAATCGACCGAAAAGCCAAAGATTACATTGACAAGATCT
ATCAGAACCGTGTCTCAGAAACTGAACGACAAATTGTCACTATTCATCCTATGAAATCCAACCATGACATGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGGAAACAAGCAAAAAAAATCACACTCTTCCTTCTCAATCTTTAGCTTTTTTAGATTTAGAAAAAGTAGAAAAGGAGATCTTTACGACCACAACAGCTCGTGGGA
TGAGATGTCGAGTTCGAGTAAGGTGTGGCGAAGTGATGAGGACAAAGCTCATCGTTGGGTCGCCGAACCCGGAATCGACCGAAAAGCCAAAGATTACATTGACAAGATCT
ATCAGAACCGTGTCTCAGAAACTGAACGACAAATTGTCACTATTCATCCTATGAAATCCAACCATGACATGTGA
Protein sequenceShow/hide protein sequence
MGGNKQKKSHSSFSIFSFFRFRKSRKGDLYDHNSSWDEMSSSSKVWRSDEDKAHRWVAEPGIDRKAKDYIDKIYQNRVSETERQIVTIHPMKSNHDM