; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0011758 (gene) of Chayote v1 genome

Gene IDSed0011758
OrganismSechium edule (Chayote v1)
DescriptionGlycine-rich RNA-binding family protein
Genome locationLG01:24530106..24534184
RNA-Seq ExpressionSed0011758
SyntenySed0011758
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR001878 - Zinc finger, CCHC-type
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily
IPR036875 - Zinc finger, CCHC-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602289.1 Glycine-rich RNA-binding protein RZ1C, partial [Cucurbita argyrosperma subsp. sororia]2.2e-14387.67Show/hide
Query:  MGSKDEYRIFVGGLSWNVTERQLENAFTRYGTILETQIMTERDTGRPRGFGFITFSDRRGMDDAIREMHGHELGDRTISVNKAEPKVDGDDTDRGFRGGG
        M +KDEYRIFVGGLSWNV+ER+LENAF+RYG I+ETQIM ERDTGRPRGFGFITF+DRRGMDDAIREMHGHE G+R ISVNKAEPK++GDD + GFRGGG
Subjt:  MGSKDEYRIFVGGLSWNVTERQLENAFTRYGTILETQIMTERDTGRPRGFGFITFSDRRGMDDAIREMHGHELGDRTISVNKAEPKVDGDDTDRGFRGGG

Query:  YSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGGVGRGGGRGSFSSRSRFDSDDRGDRFGGGRDRHVGDRYDGGRDGGRFGDRDRFDRRDDK
        YSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGG   GRG GRGSFSSRSRFD D RGDRFGG RDR+V DRYDGGRDGGR+GDRDRFDRRDDK
Subjt:  YSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGGVGRGGGRGSFSSRSRFDSDDRGDRFGGGRDRHVGDRYDGGRDGGRFGDRDRFDRRDDK

Query:  YGSRDRYFEDRFPSSGDRFAGGDRYDVSDRYPQNGYVKDRGGYDRDIAPRSGSDRYGSGGGPGRYEGRSYRDRPGPYERPSRGARASSYDRY
        YGSRDRYF+DR+PS+GDRFAGGDRYDVSDRYPQNGYVKDRGGYDRDI PRSGSDRYG+GGGPGRYEGRSYRDRPGPY+RPSRG R SSY+RY
Subjt:  YGSRDRYFEDRFPSSGDRFAGGDRYDVSDRYPQNGYVKDRGGYDRDIAPRSGSDRYGSGGGPGRYEGRSYRDRPGPYERPSRGARASSYDRY

XP_022133790.1 glycine-rich RNA-binding protein RZ1C-like isoform X1 [Momordica charantia]1.0e-13585.62Show/hide
Query:  MGSKDEYRIFVGGLSWNVTERQLENAFTRYGTILETQIMTERDTGRPRGFGFITFSDRRGMDDAIREMHGHELGDRTISVNKAEPKVDGDDTDRGFRGGG
        M  KDEYRIFVGGLSWN++ERQLENAF+RYG ILETQIM ERDTGRPRGFGFITF+DRRGMDDAIREMHG ELG+RTISVNKAEPK++GDD + GFRGGG
Subjt:  MGSKDEYRIFVGGLSWNVTERQLENAFTRYGTILETQIMTERDTGRPRGFGFITFSDRRGMDDAIREMHGHELGDRTISVNKAEPKVDGDDTDRGFRGGG

Query:  YSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGGVGRGGGRGSFSSRSRFDSDDRGDRFGGGRDRHVGDRYDGGRDGGRFGDRDRFDRRDDK
        YSSGGR SFGRGGDRSVGQDECFKCGRPGHWARDCPS GG   GRG GRGSFSSRSRFDSD RGDRFGG RDR+V DRY    DGGR+GDRD FDRRDDK
Subjt:  YSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGGVGRGGGRGSFSSRSRFDSDDRGDRFGGGRDRHVGDRYDGGRDGGRFGDRDRFDRRDDK

Query:  YGSRDRYFEDRFPSSGDRFAGGDRYDVSDRYPQNGYVKDRGGYDRDIAPRSGSDRYGSGGGPGRYEGRSYRDRPGPYERPSRGARASSYDRY
        YGSRDRYF+DR+PS GDRFAGGDRYDVSDRYPQNGYVKDRGGY+RDI PRSGSDRYGS GGPGRYEGRSYRDR GPY+RPSRG R SSY+RY
Subjt:  YGSRDRYFEDRFPSSGDRFAGGDRYDVSDRYPQNGYVKDRGGYDRDIAPRSGSDRYGSGGGPGRYEGRSYRDRPGPYERPSRGARASSYDRY

XP_022961758.1 glycine-rich RNA-binding protein RZ1C-like [Cucurbita moschata]6.5e-14387.33Show/hide
Query:  MGSKDEYRIFVGGLSWNVTERQLENAFTRYGTILETQIMTERDTGRPRGFGFITFSDRRGMDDAIREMHGHELGDRTISVNKAEPKVDGDDTDRGFRGGG
        M +KDEYRIFVGGLSWNV+ER+LENAF+RYG I+ETQIM ERDTGRPRGFGFITF+DRRGMDDAIREMHGHE G+R ISVNKAEPK++GDD + GFRGGG
Subjt:  MGSKDEYRIFVGGLSWNVTERQLENAFTRYGTILETQIMTERDTGRPRGFGFITFSDRRGMDDAIREMHGHELGDRTISVNKAEPKVDGDDTDRGFRGGG

Query:  YSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGGVGRGGGRGSFSSRSRFDSDDRGDRFGGGRDRHVGDRYDGGRDGGRFGDRDRFDRRDDK
        YSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGG   GRG GRGSFSSRSRFD D RGDRFGG RDR+V DRYDGGRDGGR+GDRDRFDRRDDK
Subjt:  YSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGGVGRGGGRGSFSSRSRFDSDDRGDRFGGGRDRHVGDRYDGGRDGGRFGDRDRFDRRDDK

Query:  YGSRDRYFEDRFPSSGDRFAGGDRYDVSDRYPQNGYVKDRGGYDRDIAPRSGSDRYGSGGGPGRYEGRSYRDRPGPYERPSRGARASSYDRY
        YGSRDRYF+DR+PS+GDRF GGDRYDVSDRYPQNGYVKDRGGYDRDI PRSGSDRYG+GGGPGRYEGRSYRDRPGPY+RPSRG R SSY+RY
Subjt:  YGSRDRYFEDRFPSSGDRFAGGDRYDVSDRYPQNGYVKDRGGYDRDIAPRSGSDRYGSGGGPGRYEGRSYRDRPGPYERPSRGARASSYDRY

XP_022990423.1 glycine-rich RNA-binding protein RZ1C [Cucurbita maxima]5.0e-14387.33Show/hide
Query:  MGSKDEYRIFVGGLSWNVTERQLENAFTRYGTILETQIMTERDTGRPRGFGFITFSDRRGMDDAIREMHGHELGDRTISVNKAEPKVDGDDTDRGFRGGG
        M +KDEYRIFVGGLSWNV+ER+LENAF+RYG I+ETQIM ERDTGRPRGFGFITF+DRRGMDDAIREMHGHE G+R ISVNKAEPK++GDD + GFRGGG
Subjt:  MGSKDEYRIFVGGLSWNVTERQLENAFTRYGTILETQIMTERDTGRPRGFGFITFSDRRGMDDAIREMHGHELGDRTISVNKAEPKVDGDDTDRGFRGGG

Query:  YSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGGVGRGGGRGSFSSRSRFDSDDRGDRFGGGRDRHVGDRYDGGRDGGRFGDRDRFDRRDDK
        YSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGG   GRG GRGSFSSRSRFD D RGDRFGG RDR+V DRYDGGRDGGR+GDRDRFDRRDDK
Subjt:  YSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGGVGRGGGRGSFSSRSRFDSDDRGDRFGGGRDRHVGDRYDGGRDGGRFGDRDRFDRRDDK

Query:  YGSRDRYFEDRFPSSGDRFAGGDRYDVSDRYPQNGYVKDRGGYDRDIAPRSGSDRYGSGGGPGRYEGRSYRDRPGPYERPSRGARASSYDRY
        YGSRDRYF+DR+PS+GDRFAGGDRYDVSDRYPQNGYVKDRGGYDRDI PRSGSDRYG+GGGPGRYEGR+YRDRPGPY+RPSRG R SSY+RY
Subjt:  YGSRDRYFEDRFPSSGDRFAGGDRYDVSDRYPQNGYVKDRGGYDRDIAPRSGSDRYGSGGGPGRYEGRSYRDRPGPYERPSRGARASSYDRY

XP_023544240.1 glycine-rich RNA-binding protein RZ1C [Cucurbita pepo subsp. pepo]8.5e-14387.33Show/hide
Query:  MGSKDEYRIFVGGLSWNVTERQLENAFTRYGTILETQIMTERDTGRPRGFGFITFSDRRGMDDAIREMHGHELGDRTISVNKAEPKVDGDDTDRGFRGGG
        M +KDEYRIFVGGLSWNV+ER+LENAF+RYG I+ETQIM ERDTGRPRGFGFITF+DRRGMDDAIREMHGHE G+R ISVNKAEPK++GDD + GFRGGG
Subjt:  MGSKDEYRIFVGGLSWNVTERQLENAFTRYGTILETQIMTERDTGRPRGFGFITFSDRRGMDDAIREMHGHELGDRTISVNKAEPKVDGDDTDRGFRGGG

Query:  YSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGGVGRGGGRGSFSSRSRFDSDDRGDRFGGGRDRHVGDRYDGGRDGGRFGDRDRFDRRDDK
        YSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPS GG   GRG GRGSFSSRSRFD D RGDRFGG RDR+V DRYDGGRDGGR+GDRDRFDRRDDK
Subjt:  YSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGGVGRGGGRGSFSSRSRFDSDDRGDRFGGGRDRHVGDRYDGGRDGGRFGDRDRFDRRDDK

Query:  YGSRDRYFEDRFPSSGDRFAGGDRYDVSDRYPQNGYVKDRGGYDRDIAPRSGSDRYGSGGGPGRYEGRSYRDRPGPYERPSRGARASSYDRY
        YGSRDRYFEDR+PS+GDRFAGGDRYDVSDRYPQNGYVK+RGGYDRDI PRSGSDRYG+GGGPGRYEGRSYRDRPGPY+RPSRG R SSY+RY
Subjt:  YGSRDRYFEDRFPSSGDRFAGGDRYDVSDRYPQNGYVKDRGGYDRDIAPRSGSDRYGSGGGPGRYEGRSYRDRPGPYERPSRGARASSYDRY

TrEMBL top hitse value%identityAlignment
A0A0A0LQB5 Uncharacterized protein2.8e-13183.9Show/hide
Query:  MGSKDEYRIFVGGLSWNVTERQLENAFTRYGTILETQIMTERDTGRPRGFGFITFSDRRGMDDAIREMHGHELGDRTISVNKAEPKVDGDDTDRGFRGGG
        M SKDEYRIFVGGLSWN++ERQLENAF R+G +LETQIM ERDTGRPRGFGFITF+DRRGMDDAIREMHG ELG+R ISVNKAEPK++GDDT++GFRGGG
Subjt:  MGSKDEYRIFVGGLSWNVTERQLENAFTRYGTILETQIMTERDTGRPRGFGFITFSDRRGMDDAIREMHGHELGDRTISVNKAEPKVDGDDTDRGFRGGG

Query:  YSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGGVGRGGGRGSFSSRSRFDSDDRGDRFGGGRDRHVGDRYDGGRDGGRFGDRDRFDRRDDK
        YSSGGRASFGRG DRSVGQDECFKCGRPGHWARDCPS GG   GRGGGRGSFSSRSRFDSD RGDRFGG RDR+V +RY    +GGR+GDRDRFDRRDDK
Subjt:  YSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGGVGRGGGRGSFSSRSRFDSDDRGDRFGGGRDRHVGDRYDGGRDGGRFGDRDRFDRRDDK

Query:  YGSRDRYFEDRFPSSGDRFAGGDRYDVSDRYPQNGYVKDRGGYDRDIAPRSGSDRYGSGGGPGRYEGRSYRDRPGPYERPSRGARASSYDRY
        YGSRDRYF+DR+PS+GDRF G DRYDVSDRYPQNGYVKDR  YDRDI PRSGSDRYGS GGPGR+EGRSYRDR GPY+RPSR  R SSYDRY
Subjt:  YGSRDRYFEDRFPSSGDRFAGGDRYDVSDRYPQNGYVKDRGGYDRDIAPRSGSDRYGSGGGPGRYEGRSYRDRPGPYERPSRGARASSYDRY

A0A6J1BW59 glycine-rich RNA-binding protein RZ1C-like isoform X21.3e-11585.83Show/hide
Query:  MTERDTGRPRGFGFITFSDRRGMDDAIREMHGHELGDRTISVNKAEPKVDGDDTDRGFRGGGYSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSA
        M ERDTGRPRGFGFITF+DRRGMDDAIREMHG ELG+RTISVNKAEPK++GDD + GFRGGGYSSGGR SFGRGGDRSVGQDECFKCGRPGHWARDCPS 
Subjt:  MTERDTGRPRGFGFITFSDRRGMDDAIREMHGHELGDRTISVNKAEPKVDGDDTDRGFRGGGYSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSA

Query:  GGGGVGRGGGRGSFSSRSRFDSDDRGDRFGGGRDRHVGDRYDGGRDGGRFGDRDRFDRRDDKYGSRDRYFEDRFPSSGDRFAGGDRYDVSDRYPQNGYVK
        GG   GRG GRGSFSSRSRFDSD RGDRFGG RDR+V DRY    DGGR+GDRD FDRRDDKYGSRDRYF+DR+PS GDRFAGGDRYDVSDRYPQNGYVK
Subjt:  GGGGVGRGGGRGSFSSRSRFDSDDRGDRFGGGRDRHVGDRYDGGRDGGRFGDRDRFDRRDDKYGSRDRYFEDRFPSSGDRFAGGDRYDVSDRYPQNGYVK

Query:  DRGGYDRDIAPRSGSDRYGSGGGPGRYEGRSYRDRPGPYERPSRGARASSYDRY
        DRGGY+RDI PRSGSDRYGS GGPGRYEGRSYRDR GPY+RPSRG R SSY+RY
Subjt:  DRGGYDRDIAPRSGSDRYGSGGGPGRYEGRSYRDRPGPYERPSRGARASSYDRY

A0A6J1BW89 glycine-rich RNA-binding protein RZ1C-like isoform X14.9e-13685.62Show/hide
Query:  MGSKDEYRIFVGGLSWNVTERQLENAFTRYGTILETQIMTERDTGRPRGFGFITFSDRRGMDDAIREMHGHELGDRTISVNKAEPKVDGDDTDRGFRGGG
        M  KDEYRIFVGGLSWN++ERQLENAF+RYG ILETQIM ERDTGRPRGFGFITF+DRRGMDDAIREMHG ELG+RTISVNKAEPK++GDD + GFRGGG
Subjt:  MGSKDEYRIFVGGLSWNVTERQLENAFTRYGTILETQIMTERDTGRPRGFGFITFSDRRGMDDAIREMHGHELGDRTISVNKAEPKVDGDDTDRGFRGGG

Query:  YSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGGVGRGGGRGSFSSRSRFDSDDRGDRFGGGRDRHVGDRYDGGRDGGRFGDRDRFDRRDDK
        YSSGGR SFGRGGDRSVGQDECFKCGRPGHWARDCPS GG   GRG GRGSFSSRSRFDSD RGDRFGG RDR+V DRY    DGGR+GDRD FDRRDDK
Subjt:  YSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGGVGRGGGRGSFSSRSRFDSDDRGDRFGGGRDRHVGDRYDGGRDGGRFGDRDRFDRRDDK

Query:  YGSRDRYFEDRFPSSGDRFAGGDRYDVSDRYPQNGYVKDRGGYDRDIAPRSGSDRYGSGGGPGRYEGRSYRDRPGPYERPSRGARASSYDRY
        YGSRDRYF+DR+PS GDRFAGGDRYDVSDRYPQNGYVKDRGGY+RDI PRSGSDRYGS GGPGRYEGRSYRDR GPY+RPSRG R SSY+RY
Subjt:  YGSRDRYFEDRFPSSGDRFAGGDRYDVSDRYPQNGYVKDRGGYDRDIAPRSGSDRYGSGGGPGRYEGRSYRDRPGPYERPSRGARASSYDRY

A0A6J1HB93 glycine-rich RNA-binding protein RZ1C-like3.2e-14387.33Show/hide
Query:  MGSKDEYRIFVGGLSWNVTERQLENAFTRYGTILETQIMTERDTGRPRGFGFITFSDRRGMDDAIREMHGHELGDRTISVNKAEPKVDGDDTDRGFRGGG
        M +KDEYRIFVGGLSWNV+ER+LENAF+RYG I+ETQIM ERDTGRPRGFGFITF+DRRGMDDAIREMHGHE G+R ISVNKAEPK++GDD + GFRGGG
Subjt:  MGSKDEYRIFVGGLSWNVTERQLENAFTRYGTILETQIMTERDTGRPRGFGFITFSDRRGMDDAIREMHGHELGDRTISVNKAEPKVDGDDTDRGFRGGG

Query:  YSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGGVGRGGGRGSFSSRSRFDSDDRGDRFGGGRDRHVGDRYDGGRDGGRFGDRDRFDRRDDK
        YSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGG   GRG GRGSFSSRSRFD D RGDRFGG RDR+V DRYDGGRDGGR+GDRDRFDRRDDK
Subjt:  YSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGGVGRGGGRGSFSSRSRFDSDDRGDRFGGGRDRHVGDRYDGGRDGGRFGDRDRFDRRDDK

Query:  YGSRDRYFEDRFPSSGDRFAGGDRYDVSDRYPQNGYVKDRGGYDRDIAPRSGSDRYGSGGGPGRYEGRSYRDRPGPYERPSRGARASSYDRY
        YGSRDRYF+DR+PS+GDRF GGDRYDVSDRYPQNGYVKDRGGYDRDI PRSGSDRYG+GGGPGRYEGRSYRDRPGPY+RPSRG R SSY+RY
Subjt:  YGSRDRYFEDRFPSSGDRFAGGDRYDVSDRYPQNGYVKDRGGYDRDIAPRSGSDRYGSGGGPGRYEGRSYRDRPGPYERPSRGARASSYDRY

A0A6J1JS04 glycine-rich RNA-binding protein RZ1C2.4e-14387.33Show/hide
Query:  MGSKDEYRIFVGGLSWNVTERQLENAFTRYGTILETQIMTERDTGRPRGFGFITFSDRRGMDDAIREMHGHELGDRTISVNKAEPKVDGDDTDRGFRGGG
        M +KDEYRIFVGGLSWNV+ER+LENAF+RYG I+ETQIM ERDTGRPRGFGFITF+DRRGMDDAIREMHGHE G+R ISVNKAEPK++GDD + GFRGGG
Subjt:  MGSKDEYRIFVGGLSWNVTERQLENAFTRYGTILETQIMTERDTGRPRGFGFITFSDRRGMDDAIREMHGHELGDRTISVNKAEPKVDGDDTDRGFRGGG

Query:  YSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGGVGRGGGRGSFSSRSRFDSDDRGDRFGGGRDRHVGDRYDGGRDGGRFGDRDRFDRRDDK
        YSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGG   GRG GRGSFSSRSRFD D RGDRFGG RDR+V DRYDGGRDGGR+GDRDRFDRRDDK
Subjt:  YSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGGVGRGGGRGSFSSRSRFDSDDRGDRFGGGRDRHVGDRYDGGRDGGRFGDRDRFDRRDDK

Query:  YGSRDRYFEDRFPSSGDRFAGGDRYDVSDRYPQNGYVKDRGGYDRDIAPRSGSDRYGSGGGPGRYEGRSYRDRPGPYERPSRGARASSYDRY
        YGSRDRYF+DR+PS+GDRFAGGDRYDVSDRYPQNGYVKDRGGYDRDI PRSGSDRYG+GGGPGRYEGR+YRDRPGPY+RPSRG R SSY+RY
Subjt:  YGSRDRYFEDRFPSSGDRFAGGDRYDVSDRYPQNGYVKDRGGYDRDIAPRSGSDRYGSGGGPGRYEGRSYRDRPGPYERPSRGARASSYDRY

SwissProt top hitse value%identityAlignment
O22703 Glycine-rich RNA-binding protein RZ1B4.7e-6755.85Show/hide
Query:  EYRIFVGGLSWNVTERQLENAFTRYGTILETQIMTERDTGRPRGFGFITFSDRRGMDDAIREMHGHELGDRTISVNKAEPKVDGDDTDRGFRGGGYSSGG
        E RIFVGGLSW+VTERQLE+ F RYG I E QIM  RDTGRPRGFGFITF+DRRG DDAI+ MHG ELG++ ISVNKAEPKV G+D D+  +GGGYSS G
Subjt:  EYRIFVGGLSWNVTERQLENAFTRYGTILETQIMTERDTGRPRGFGFITFSDRRGMDDAIREMHGHELGDRTISVNKAEPKVDGDDTDRGFRGGGYSSGG

Query:  RASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGGVGRGGGRGSFSSRSRF-DSDDRGDRFGG-------GRDRHVGDRYDGG---RDGGRFGDRDRF
        + +          +DECFKC RPGHWARDCPS G     R   R   + RSR  D D   DR+G         R+R   DRY  G   RDGGR+  RDRF
Subjt:  RASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGGVGRGGGRGSFSSRSRF-DSDDRGDRFGG-------GRDRHVGDRYDGG---RDGGRFGDRDRF

Query:  DRRDDKYGSRDRYFEDRFPSSGDRFAGGDRYDVSDRYPQNGYVKDRGGYDRDIAPRSGSDRYGSGGGPGRYEGRSYRDRPGPYERPSR-GARASSYDRY
        D   DKY  RD Y  +R+   GDRF   DRY + + + +N Y      YDRD   R  SDRYG   GP R EGR YR RPGPY+RPSR G R SSY+R+
Subjt:  DRRDDKYGSRDRYFEDRFPSSGDRFAGGDRYDVSDRYPQNGYVKDRGGYDRDIAPRSGSDRYGSGGGPGRYEGRSYRDRPGPYERPSR-GARASSYDRY

P49310 Glycine-rich RNA-binding protein GRP1A9.8e-2542.69Show/hide
Query:  MGSKD-EYRIFVGGLSWNVTERQLENAFTRYGTILETQIMTERDTGRPRGFGFITFSDRRGMDDAIREMHGHELGDRTISVNKAEPKVDGDDTDRGFRGG
        M S D EYR FVGGL+W   +R LE AF++YG +L+++I+ +R+TGR RGFGF+TF D + M DAI  M+G +L  R+I+VN+A+ +  G        GG
Subjt:  MGSKD-EYRIFVGGLSWNVTERQLENAFTRYGTILETQIMTERDTGRPRGFGFITFSDRRGMDDAIREMHGHELGDRTISVNKAEPKVDGDDTDRGFRGG

Query:  GYSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGGVGRGGGRGSFSSRSRFDSDDRGDRFGGG
        GY SGG   +G GG    G       GR G ++      GGG   RGGG G +    R D  + G   G G
Subjt:  GYSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGGVGRGGGRGSFSSRSRFDSDDRGDRFGGG

Q03250 Glycine-rich RNA-binding protein 78.3e-2442.41Show/hide
Query:  MGSKD-EYRIFVGGLSWNVTERQLENAFTRYGTILETQIMTERDTGRPRGFGFITFSDRRGMDDAIREMHGHELGDRTISVNKAEPK-VDGDDTDRGFRG
        M S D EYR FVGGL+W   +R LE AF +YG +++++I+ +R+TGR RGFGF+TF D + M DAI  M+G +L  R+I+VN+A+ +   G    RG  G
Subjt:  MGSKD-EYRIFVGGLSWNVTERQLENAFTRYGTILETQIMTERDTGRPRGFGFITFSDRRGMDDAIREMHGHELGDRTISVNKAEPK-VDGDDTDRGFRG

Query:  GGYSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGGVGRGGGRGSFSSRSRFDSDDRGDRFGGGRDRHVGDRYDGGRDGGRFG
        GGY SGG   +  GG    G          G   R+      GG G  GG G +SSR        G  +GGGR R  G  Y GG  GG  G
Subjt:  GGYSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGGVGRGGGRGSFSSRSRFDSDDRGDRFGGGRDRHVGDRYDGGRDGGRFG

Q8RWN5 Glycine-rich RNA-binding protein RZ1C6.1e-7557.23Show/hide
Query:  MGSKDEYRIFVGGLSWNVTERQLENAFTRYGTILETQIMTERDTGRPRGFGFITFSDRRGMDDAIREMHGHELGDRTISVNKAEPKVDGDDTD----RGF
        M +K+  RIFVGGLS  VT+R LE AF+R+G IL+ QIM ERDTGR RGFGFITF+DRR MD++IREMHG + GDR ISVN+AEPK+  DD +    RG 
Subjt:  MGSKDEYRIFVGGLSWNVTERQLENAFTRYGTILETQIMTERDTGRPRGFGFITFSDRRGMDDAIREMHGHELGDRTISVNKAEPKVDGDDTD----RGF

Query:  RGGGYSSGGRASFGRGGDRS--VGQDECFKCGRPGHWARDCPSAGGGGVGRGGGRGSFSSRSRF--DSDDRGDRFGG-----GRDRHVGDRYDGGRDGGR
        R  GYS  G+ SFG GG     VG+DECFKCGR GHWARDCPSAGG   GRGG  G FSSR+     SD R DR+        R+R++ DRYDG     R
Subjt:  RGGGYSSGGRASFGRGGDRS--VGQDECFKCGRPGHWARDCPSAGGGGVGRGGGRGSFSSRSRF--DSDDRGDRFGG-----GRDRHVGDRYDGGRDGGR

Query:  FGDRDRFDRRDDKYGSRDRYFEDRFPSSGDRFAGGDRYD-VSDRYPQNGYVKDRGGYDRDIAPRSGSDRYGSG--GGP---GRYEGRSYRDRPG-PYERP
        +G RDRFD R + Y  RDRY  DR+ +  DRFAGGDRY   SDRYP   Y K R  ++RDIAP +GSDRYG G  GGP   G  EGR +R R G PYERP
Subjt:  FGDRDRFDRRDDKYGSRDRYFEDRFPSSGDRFAGGDRYD-VSDRYPQNGYVKDRGGYDRDIAPRSGSDRYGSG--GGP---GRYEGRSYRDRPG-PYERP

Query:  SRGA------RASSYDRY
        SR         +S++DRY
Subjt:  SRGA------RASSYDRY

Q9LIN3 Glycine-rich RNA-binding protein RZ1A4.7e-3543.35Show/hide
Query:  MGSKDEYRIFVGGLSWNVTERQLENAFTRYGTILETQIMTERDTGRPRGFGFITFSDRRGMDDAIREMHGHELGDRTISVNKAEPKVDG----DDTDRGF
        M    EYR F+GGL+W  ++R L +AF +YG ++E +++ ++ +GR RGFGFITF +++ MD+AI  M+G +L  RTI+V+KA+P   G    +D DRG 
Subjt:  MGSKDEYRIFVGGLSWNVTERQLENAFTRYGTILETQIMTERDTGRPRGFGFITFSDRRGMDDAIREMHGHELGDRTISVNKAEPKVDG----DDTDRGF

Query:  RGGGYSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGGVGRGGGRGSFSSR-SRFDSDDRGDRFGGGRDRHVG--DRYDGGRDGGRFGDRDR
          G      R S GRGG       +CFKCG+PGH+AR+CPS       R GG G FSS+  R+ S D  DR+G   DR+    DRY G +D       DR
Subjt:  RGGGYSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGGVGRGGGRGSFSSR-SRFDSDDRGDRFGGGRDRHVG--DRYDGGRDGGRFGDRDR

Query:  FDRRDDKYGSRD----RYFEDRFPSSGDRFAGGDRYDVSDRYPQNGYVKDRGGYDRDIAPRSG
        +  +DD+YGSRD    RY  DR   SG+R AGG   D   R    G    R  YDR   PR+G
Subjt:  FDRRDDKYGSRD----RYFEDRFPSSGDRFAGGDRYDVSDRYPQNGYVKDRGGYDRDIAPRSG

Arabidopsis top hitse value%identityAlignment
AT1G60650.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain3.3e-6855.85Show/hide
Query:  EYRIFVGGLSWNVTERQLENAFTRYGTILETQIMTERDTGRPRGFGFITFSDRRGMDDAIREMHGHELGDRTISVNKAEPKVDGDDTDRGFRGGGYSSGG
        E RIFVGGLSW+VTERQLE+ F RYG I E QIM  RDTGRPRGFGFITF+DRRG DDAI+ MHG ELG++ ISVNKAEPKV G+D D+  +GGGYSS G
Subjt:  EYRIFVGGLSWNVTERQLENAFTRYGTILETQIMTERDTGRPRGFGFITFSDRRGMDDAIREMHGHELGDRTISVNKAEPKVDGDDTDRGFRGGGYSSGG

Query:  RASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGGVGRGGGRGSFSSRSRF-DSDDRGDRFGG-------GRDRHVGDRYDGG---RDGGRFGDRDRF
        + +          +DECFKC RPGHWARDCPS G     R   R   + RSR  D D   DR+G         R+R   DRY  G   RDGGR+  RDRF
Subjt:  RASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGGVGRGGGRGSFSSRSRF-DSDDRGDRFGG-------GRDRHVGDRYDGG---RDGGRFGDRDRF

Query:  DRRDDKYGSRDRYFEDRFPSSGDRFAGGDRYDVSDRYPQNGYVKDRGGYDRDIAPRSGSDRYGSGGGPGRYEGRSYRDRPGPYERPSR-GARASSYDRY
        D   DKY  RD Y  +R+   GDRF   DRY + + + +N Y      YDRD   R  SDRYG   GP R EGR YR RPGPY+RPSR G R SSY+R+
Subjt:  DRRDDKYGSRDRYFEDRFPSSGDRFAGGDRYDVSDRYPQNGYVKDRGGYDRDIAPRSGSDRYGSGGGPGRYEGRSYRDRPGPYERPSR-GARASSYDRY

AT1G60650.2 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain3.3e-6855.85Show/hide
Query:  EYRIFVGGLSWNVTERQLENAFTRYGTILETQIMTERDTGRPRGFGFITFSDRRGMDDAIREMHGHELGDRTISVNKAEPKVDGDDTDRGFRGGGYSSGG
        E RIFVGGLSW+VTERQLE+ F RYG I E QIM  RDTGRPRGFGFITF+DRRG DDAI+ MHG ELG++ ISVNKAEPKV G+D D+  +GGGYSS G
Subjt:  EYRIFVGGLSWNVTERQLENAFTRYGTILETQIMTERDTGRPRGFGFITFSDRRGMDDAIREMHGHELGDRTISVNKAEPKVDGDDTDRGFRGGGYSSGG

Query:  RASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGGVGRGGGRGSFSSRSRF-DSDDRGDRFGG-------GRDRHVGDRYDGG---RDGGRFGDRDRF
        + +          +DECFKC RPGHWARDCPS G     R   R   + RSR  D D   DR+G         R+R   DRY  G   RDGGR+  RDRF
Subjt:  RASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGGVGRGGGRGSFSSRSRF-DSDDRGDRFGG-------GRDRHVGDRYDGG---RDGGRFGDRDRF

Query:  DRRDDKYGSRDRYFEDRFPSSGDRFAGGDRYDVSDRYPQNGYVKDRGGYDRDIAPRSGSDRYGSGGGPGRYEGRSYRDRPGPYERPSR-GARASSYDRY
        D   DKY  RD Y  +R+   GDRF   DRY + + + +N Y      YDRD   R  SDRYG   GP R EGR YR RPGPY+RPSR G R SSY+R+
Subjt:  DRRDDKYGSRDRYFEDRFPSSGDRFAGGDRYDVSDRYPQNGYVKDRGGYDRDIAPRSGSDRYGSGGGPGRYEGRSYRDRPGPYERPSR-GARASSYDRY

AT2G21660.1 cold, circadian rhythm, and rna binding 25.9e-2542.41Show/hide
Query:  MGSKD-EYRIFVGGLSWNVTERQLENAFTRYGTILETQIMTERDTGRPRGFGFITFSDRRGMDDAIREMHGHELGDRTISVNKAEPK-VDGDDTDRGFRG
        M S D EYR FVGGL+W   +R LE AF +YG +++++I+ +R+TGR RGFGF+TF D + M DAI  M+G +L  R+I+VN+A+ +   G    RG  G
Subjt:  MGSKD-EYRIFVGGLSWNVTERQLENAFTRYGTILETQIMTERDTGRPRGFGFITFSDRRGMDDAIREMHGHELGDRTISVNKAEPK-VDGDDTDRGFRG

Query:  GGYSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGGVGRGGGRGSFSSRSRFDSDDRGDRFGGGRDRHVGDRYDGGRDGGRFG
        GGY SGG   +  GG    G          G   R+      GG G  GG G +SSR        G  +GGGR R  G  Y GG  GG  G
Subjt:  GGYSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGGVGRGGGRGSFSSRSRFDSDDRGDRFGGGRDRHVGDRYDGGRDGGRFG

AT3G26420.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain3.3e-3643.35Show/hide
Query:  MGSKDEYRIFVGGLSWNVTERQLENAFTRYGTILETQIMTERDTGRPRGFGFITFSDRRGMDDAIREMHGHELGDRTISVNKAEPKVDG----DDTDRGF
        M    EYR F+GGL+W  ++R L +AF +YG ++E +++ ++ +GR RGFGFITF +++ MD+AI  M+G +L  RTI+V+KA+P   G    +D DRG 
Subjt:  MGSKDEYRIFVGGLSWNVTERQLENAFTRYGTILETQIMTERDTGRPRGFGFITFSDRRGMDDAIREMHGHELGDRTISVNKAEPKVDG----DDTDRGF

Query:  RGGGYSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGGVGRGGGRGSFSSR-SRFDSDDRGDRFGGGRDRHVG--DRYDGGRDGGRFGDRDR
          G      R S GRGG       +CFKCG+PGH+AR+CPS       R GG G FSS+  R+ S D  DR+G   DR+    DRY G +D       DR
Subjt:  RGGGYSSGGRASFGRGGDRSVGQDECFKCGRPGHWARDCPSAGGGGVGRGGGRGSFSSR-SRFDSDDRGDRFGGGRDRHVG--DRYDGGRDGGRFGDRDR

Query:  FDRRDDKYGSRD----RYFEDRFPSSGDRFAGGDRYDVSDRYPQNGYVKDRGGYDRDIAPRSG
        +  +DD+YGSRD    RY  DR   SG+R AGG   D   R    G    R  YDR   PR+G
Subjt:  FDRRDDKYGSRD----RYFEDRFPSSGDRFAGGDRYDVSDRYPQNGYVKDRGGYDRDIAPRSG

AT5G04280.1 RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain4.3e-7657.23Show/hide
Query:  MGSKDEYRIFVGGLSWNVTERQLENAFTRYGTILETQIMTERDTGRPRGFGFITFSDRRGMDDAIREMHGHELGDRTISVNKAEPKVDGDDTD----RGF
        M +K+  RIFVGGLS  VT+R LE AF+R+G IL+ QIM ERDTGR RGFGFITF+DRR MD++IREMHG + GDR ISVN+AEPK+  DD +    RG 
Subjt:  MGSKDEYRIFVGGLSWNVTERQLENAFTRYGTILETQIMTERDTGRPRGFGFITFSDRRGMDDAIREMHGHELGDRTISVNKAEPKVDGDDTD----RGF

Query:  RGGGYSSGGRASFGRGGDRS--VGQDECFKCGRPGHWARDCPSAGGGGVGRGGGRGSFSSRSRF--DSDDRGDRFGG-----GRDRHVGDRYDGGRDGGR
        R  GYS  G+ SFG GG     VG+DECFKCGR GHWARDCPSAGG   GRGG  G FSSR+     SD R DR+        R+R++ DRYDG     R
Subjt:  RGGGYSSGGRASFGRGGDRS--VGQDECFKCGRPGHWARDCPSAGGGGVGRGGGRGSFSSRSRF--DSDDRGDRFGG-----GRDRHVGDRYDGGRDGGR

Query:  FGDRDRFDRRDDKYGSRDRYFEDRFPSSGDRFAGGDRYD-VSDRYPQNGYVKDRGGYDRDIAPRSGSDRYGSG--GGP---GRYEGRSYRDRPG-PYERP
        +G RDRFD R + Y  RDRY  DR+ +  DRFAGGDRY   SDRYP   Y K R  ++RDIAP +GSDRYG G  GGP   G  EGR +R R G PYERP
Subjt:  FGDRDRFDRRDDKYGSRDRYFEDRFPSSGDRFAGGDRYD-VSDRYPQNGYVKDRGGYDRDIAPRSGSDRYGSG--GGP---GRYEGRSYRDRPG-PYERP

Query:  SRGA------RASSYDRY
        SR         +S++DRY
Subjt:  SRGA------RASSYDRY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCTCGAAGGACGAGTATCGAATATTTGTGGGAGGGCTCTCATGGAATGTTACGGAGCGTCAGCTCGAAAACGCTTTCACCCGCTACGGCACAATTCTTGAAACTCA
GATCATGACAGAACGAGATACAGGACGTCCTCGTGGGTTCGGTTTTATTACCTTTTCAGACCGTCGAGGGATGGATGACGCAATAAGAGAGATGCATGGCCATGAGCTTG
GTGATCGGACTATCTCTGTAAATAAGGCTGAGCCAAAGGTGGATGGAGATGATACAGACCGAGGATTCAGAGGGGGTGGCTACTCATCTGGTGGCAGAGCTAGTTTTGGG
AGAGGAGGAGATAGATCTGTGGGGCAAGATGAATGCTTCAAGTGTGGGCGCCCAGGACATTGGGCACGAGACTGTCCTTCAGCTGGTGGTGGTGGTGTTGGACGTGGTGG
GGGTAGAGGTTCATTTTCATCACGTTCTCGATTTGATAGTGATGATCGTGGGGATCGTTTTGGAGGAGGTCGTGACCGCCATGTGGGTGACCGTTATGATGGAGGGCGAG
ATGGGGGACGATTTGGTGATAGAGATCGTTTTGATCGTAGGGATGACAAGTATGGAAGTCGAGACCGCTATTTCGAAGACAGGTTCCCATCTTCTGGAGATCGTTTTGCC
GGTGGTGATAGGTATGATGTTAGTGATCGCTATCCTCAAAATGGGTATGTCAAAGACAGAGGTGGCTATGATAGGGATATTGCTCCAAGGAGTGGCAGTGATCGGTATGG
TAGCGGCGGAGGTCCTGGCCGTTATGAGGGAAGAAGTTACAGAGATAGGCCAGGGCCCTACGAACGCCCGAGCAGGGGAGCACGAGCGTCTTCCTACGACCGCTATTAA
mRNA sequenceShow/hide mRNA sequence
ATAGAATTGTGTTATGAACCGGAGAACATGTCGATCTAAGACGCTAGGGTTTAATACTGAGAGTCCAAAAACCCTGCACAAAGGAATTGATTGATAGCCGAAGGGCTAAT
GGGCTCGAAGGACGAGTATCGAATATTTGTGGGAGGGCTCTCATGGAATGTTACGGAGCGTCAGCTCGAAAACGCTTTCACCCGCTACGGCACAATTCTTGAAACTCAGA
TCATGACAGAACGAGATACAGGACGTCCTCGTGGGTTCGGTTTTATTACCTTTTCAGACCGTCGAGGGATGGATGACGCAATAAGAGAGATGCATGGCCATGAGCTTGGT
GATCGGACTATCTCTGTAAATAAGGCTGAGCCAAAGGTGGATGGAGATGATACAGACCGAGGATTCAGAGGGGGTGGCTACTCATCTGGTGGCAGAGCTAGTTTTGGGAG
AGGAGGAGATAGATCTGTGGGGCAAGATGAATGCTTCAAGTGTGGGCGCCCAGGACATTGGGCACGAGACTGTCCTTCAGCTGGTGGTGGTGGTGTTGGACGTGGTGGGG
GTAGAGGTTCATTTTCATCACGTTCTCGATTTGATAGTGATGATCGTGGGGATCGTTTTGGAGGAGGTCGTGACCGCCATGTGGGTGACCGTTATGATGGAGGGCGAGAT
GGGGGACGATTTGGTGATAGAGATCGTTTTGATCGTAGGGATGACAAGTATGGAAGTCGAGACCGCTATTTCGAAGACAGGTTCCCATCTTCTGGAGATCGTTTTGCCGG
TGGTGATAGGTATGATGTTAGTGATCGCTATCCTCAAAATGGGTATGTCAAAGACAGAGGTGGCTATGATAGGGATATTGCTCCAAGGAGTGGCAGTGATCGGTATGGTA
GCGGCGGAGGTCCTGGCCGTTATGAGGGAAGAAGTTACAGAGATAGGCCAGGGCCCTACGAACGCCCGAGCAGGGGAGCACGAGCGTCTTCCTACGACCGCTATTAAAAT
TCACATGCACGTACTACTCTTAGTTGTTTATTTACATTTCAAATCATTTTACAAACTTGTGAGTTAGCTAGGATGTGCTTTTGCCATGAAACTCTGTATGCAAACCTCTT
GTCCTTTTTGGATTTGATGCTATCCAATTCTCACTGCTTTTCAATTTTTGGATGTTACATCTACAAGTATCTGATATTCATCTAAATGATCCAAC
Protein sequenceShow/hide protein sequence
MGSKDEYRIFVGGLSWNVTERQLENAFTRYGTILETQIMTERDTGRPRGFGFITFSDRRGMDDAIREMHGHELGDRTISVNKAEPKVDGDDTDRGFRGGGYSSGGRASFG
RGGDRSVGQDECFKCGRPGHWARDCPSAGGGGVGRGGGRGSFSSRSRFDSDDRGDRFGGGRDRHVGDRYDGGRDGGRFGDRDRFDRRDDKYGSRDRYFEDRFPSSGDRFA
GGDRYDVSDRYPQNGYVKDRGGYDRDIAPRSGSDRYGSGGGPGRYEGRSYRDRPGPYERPSRGARASSYDRY