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Sed0011795 (gene) of Chayote v1 genome

Gene IDSed0011795
OrganismSechium edule (Chayote v1)
DescriptionProtein ALP1-like
Genome locationLG09:10661855..10663640
RNA-Seq ExpressionSed0011795
SyntenySed0011795
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR027806 - Harbinger transposase-derived nuclease domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0068176.1 putative nuclease HARBI1 isoform X1 [Cucumis melo var. makuwa]5.4e-5571.24Show/hide
Query:  VFKDWIDAIDGTHIDASVLQNLQIPFRGRKSNITWNIMCVCSFDMLFTYVMSDWEGSANNSRILLECIKHLENKFHMPK--------------GGFLVPY
        +FKD I AIDGTH+ AS+ QN QIPFRGRK+N TWNIMCVCSFDMLFTYVMS WEGSAN+SRIL ECIK+ ENKF MPK               GFL P+
Subjt:  VFKDWIDAIDGTHIDASVLQNLQIPFRGRKSNITWNIMCVCSFDMLFTYVMSDWEGSANNSRILLECIKHLENKFHMPK--------------GGFLVPY

Query:  RSQRYHLRDFRERRHQPRGKEEVFNYRHSSLQNVVERCFGMLKARFLSLNKCP
        R QRYHLRDFRERRH+PRG+EEVFNYRHSSL+NV+ERCFG+LKARF  L + P
Subjt:  RSQRYHLRDFRERRHQPRGKEEVFNYRHSSLQNVVERCFGMLKARFLSLNKCP

TYK06269.1 protein ALP1-like [Cucumis melo var. makuwa]4.2e-5568.1Show/hide
Query:  FKDWIDAIDGTHIDASVLQNLQIPFRGRKSNITWNIMCVCSFDMLFTYVMSDWEGSANNSRILLECIKHLENKFHMPK--------------GGFLVPYR
        FKD I AIDGTH+ AS+ QN QIPFRGRK+N TWNIMCVCSFDMLFTYVMS WEGSAN+SRIL ECIK+ ENKF MPK               GFL P+R
Subjt:  FKDWIDAIDGTHIDASVLQNLQIPFRGRKSNITWNIMCVCSFDMLFTYVMSDWEGSANNSRILLECIKHLENKFHMPK--------------GGFLVPYR

Query:  SQRYHLRDFRERRHQPRGKEEVFNYRHSSLQNVVERCFGMLKARFLSLNKCPLIHSKHKNIYP
         QRYHLRDFRERRH+PRG+EEVFNYRHSSL+NV+ERCFG+LKARF  L + P    K +   P
Subjt:  SQRYHLRDFRERRHQPRGKEEVFNYRHSSLQNVVERCFGMLKARFLSLNKCPLIHSKHKNIYP

TYK21096.1 protein ALP1-like [Cucumis melo var. makuwa]7.1e-5571.71Show/hide
Query:  FKDWIDAIDGTHIDASVLQNLQIPFRGRKSNITWNIMCVCSFDMLFTYVMSDWEGSANNSRILLECIKHLENKFHMPK--------------GGFLVPYR
        FKD I AIDGTH+ AS+ QN QIPFRGRK+N TWNIMCVCSFDMLFTYVMS WEGSAN+SRIL ECIK+ ENKF MPK               GFL P+R
Subjt:  FKDWIDAIDGTHIDASVLQNLQIPFRGRKSNITWNIMCVCSFDMLFTYVMSDWEGSANNSRILLECIKHLENKFHMPK--------------GGFLVPYR

Query:  SQRYHLRDFRERRHQPRGKEEVFNYRHSSLQNVVERCFGMLKARFLSLNKCP
         QRYHLRDFRERRH+PRG+EEVFNYRHSSL+NV+ERCFG+LKARF  L + P
Subjt:  SQRYHLRDFRERRHQPRGKEEVFNYRHSSLQNVVERCFGMLKARFLSLNKCP

XP_016901856.1 PREDICTED: uncharacterized protein LOC103496041 [Cucumis melo]3.8e-4866.45Show/hide
Query:  FKDWIDAIDGTHIDASVLQNLQIPFRGRKSNITWNIMCVCSFDMLFTYVMSDWEGSANNSRILLECIKHLENKFHMPKGG--------------FLVPYR
        FKD+I AID TH+ AS+LQN QI FRGRK+N TWNIMCVCSFDMLFTYVMS WEGS N+ RIL ECI++ ENKF MPK                FL P++
Subjt:  FKDWIDAIDGTHIDASVLQNLQIPFRGRKSNITWNIMCVCSFDMLFTYVMSDWEGSANNSRILLECIKHLENKFHMPKGG--------------FLVPYR

Query:  SQRYHLRDFRERRHQPRGKEEVFNYRHSSLQNVVERCFGMLKARFLSLNKCP
         +RYHLRDFRERRH PRG+ EVFNYRHSSL+NV+ERCFG+LKARF  L + P
Subjt:  SQRYHLRDFRERRHQPRGKEEVFNYRHSSLQNVVERCFGMLKARFLSLNKCP

XP_026432987.1 uncharacterized protein LOC113330380 [Papaver somniferum]2.9e-4052.76Show/hide
Query:  FKDWIDAIDGTHIDASVLQNLQIPFRGRKSNITWNIMCVCSFDMLFTYVMSDWEGSANNSRILLECIKHLENKFHMPK--------------GGFLVPYR
        F D + AIDGTHI A V  + QIPFRGRK+ IT NIMC CSFDMLFT+V + WEG+AN++R+L++ I + ENKF MP+               GFL PYR
Subjt:  FKDWIDAIDGTHIDASVLQNLQIPFRGRKSNITWNIMCVCSFDMLFTYVMSDWEGSANNSRILLECIKHLENKFHMPK--------------GGFLVPYR

Query:  SQRYHLRDFRERRHQPRGKEEVFNYRHSSLQNVVERCFGMLKARFLSLNKCPLIHSKHKNIYP
         +RYHLRDFR R  Q +G  E+FN+RHSSL+NV+ERCFG+ K+RF  L   P    + + + P
Subjt:  SQRYHLRDFRERRHQPRGKEEVFNYRHSSLQNVVERCFGMLKARFLSLNKCPLIHSKHKNIYP

TrEMBL top hitse value%identityAlignment
A0A1S4E0U9 uncharacterized protein LOC1034960411.8e-4866.45Show/hide
Query:  FKDWIDAIDGTHIDASVLQNLQIPFRGRKSNITWNIMCVCSFDMLFTYVMSDWEGSANNSRILLECIKHLENKFHMPKGG--------------FLVPYR
        FKD+I AID TH+ AS+LQN QI FRGRK+N TWNIMCVCSFDMLFTYVMS WEGS N+ RIL ECI++ ENKF MPK                FL P++
Subjt:  FKDWIDAIDGTHIDASVLQNLQIPFRGRKSNITWNIMCVCSFDMLFTYVMSDWEGSANNSRILLECIKHLENKFHMPKGG--------------FLVPYR

Query:  SQRYHLRDFRERRHQPRGKEEVFNYRHSSLQNVVERCFGMLKARFLSLNKCP
         +RYHLRDFRERRH PRG+ EVFNYRHSSL+NV+ERCFG+LKARF  L + P
Subjt:  SQRYHLRDFRERRHQPRGKEEVFNYRHSSLQNVVERCFGMLKARFLSLNKCP

A0A4Y7J673 Uncharacterized protein1.8e-4052.76Show/hide
Query:  FKDWIDAIDGTHIDASVLQNLQIPFRGRKSNITWNIMCVCSFDMLFTYVMSDWEGSANNSRILLECIKHLENKFHMPK--------------GGFLVPYR
        F D + AIDGTHI A V  + QIPFRGRK+ IT NIMC CSFDMLFT+V + WEG+AN++R+L++ I + ENKF MP+               GFL PYR
Subjt:  FKDWIDAIDGTHIDASVLQNLQIPFRGRKSNITWNIMCVCSFDMLFTYVMSDWEGSANNSRILLECIKHLENKFHMPK--------------GGFLVPYR

Query:  SQRYHLRDFRERRHQPRGKEEVFNYRHSSLQNVVERCFGMLKARFLSLNKCPLIHSKHKNIYP
         +RYHLRDFR R  Q +G  E+FN+RHSSL+NV+ERCFG+ K+RF  L   P    + + + P
Subjt:  SQRYHLRDFRERRHQPRGKEEVFNYRHSSLQNVVERCFGMLKARFLSLNKCPLIHSKHKNIYP

A0A5A7VNL5 Putative nuclease HARBI1 isoform X12.6e-5571.24Show/hide
Query:  VFKDWIDAIDGTHIDASVLQNLQIPFRGRKSNITWNIMCVCSFDMLFTYVMSDWEGSANNSRILLECIKHLENKFHMPK--------------GGFLVPY
        +FKD I AIDGTH+ AS+ QN QIPFRGRK+N TWNIMCVCSFDMLFTYVMS WEGSAN+SRIL ECIK+ ENKF MPK               GFL P+
Subjt:  VFKDWIDAIDGTHIDASVLQNLQIPFRGRKSNITWNIMCVCSFDMLFTYVMSDWEGSANNSRILLECIKHLENKFHMPK--------------GGFLVPY

Query:  RSQRYHLRDFRERRHQPRGKEEVFNYRHSSLQNVVERCFGMLKARFLSLNKCP
        R QRYHLRDFRERRH+PRG+EEVFNYRHSSL+NV+ERCFG+LKARF  L + P
Subjt:  RSQRYHLRDFRERRHQPRGKEEVFNYRHSSLQNVVERCFGMLKARFLSLNKCP

A0A5D3C7F6 Protein ALP1-like2.0e-5568.1Show/hide
Query:  FKDWIDAIDGTHIDASVLQNLQIPFRGRKSNITWNIMCVCSFDMLFTYVMSDWEGSANNSRILLECIKHLENKFHMPK--------------GGFLVPYR
        FKD I AIDGTH+ AS+ QN QIPFRGRK+N TWNIMCVCSFDMLFTYVMS WEGSAN+SRIL ECIK+ ENKF MPK               GFL P+R
Subjt:  FKDWIDAIDGTHIDASVLQNLQIPFRGRKSNITWNIMCVCSFDMLFTYVMSDWEGSANNSRILLECIKHLENKFHMPK--------------GGFLVPYR

Query:  SQRYHLRDFRERRHQPRGKEEVFNYRHSSLQNVVERCFGMLKARFLSLNKCPLIHSKHKNIYP
         QRYHLRDFRERRH+PRG+EEVFNYRHSSL+NV+ERCFG+LKARF  L + P    K +   P
Subjt:  SQRYHLRDFRERRHQPRGKEEVFNYRHSSLQNVVERCFGMLKARFLSLNKCPLIHSKHKNIYP

A0A5D3DC11 Protein ALP1-like3.4e-5571.71Show/hide
Query:  FKDWIDAIDGTHIDASVLQNLQIPFRGRKSNITWNIMCVCSFDMLFTYVMSDWEGSANNSRILLECIKHLENKFHMPK--------------GGFLVPYR
        FKD I AIDGTH+ AS+ QN QIPFRGRK+N TWNIMCVCSFDMLFTYVMS WEGSAN+SRIL ECIK+ ENKF MPK               GFL P+R
Subjt:  FKDWIDAIDGTHIDASVLQNLQIPFRGRKSNITWNIMCVCSFDMLFTYVMSDWEGSANNSRILLECIKHLENKFHMPK--------------GGFLVPYR

Query:  SQRYHLRDFRERRHQPRGKEEVFNYRHSSLQNVVERCFGMLKARFLSLNKCP
         QRYHLRDFRERRH+PRG+EEVFNYRHSSL+NV+ERCFG+LKARF  L + P
Subjt:  SQRYHLRDFRERRHQPRGKEEVFNYRHSSLQNVVERCFGMLKARFLSLNKCP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G43722.1 unknown protein1.8e-1634.39Show/hide
Query:  LFVDFRSSLVFKDWIDAIDGTHIDASVLQNLQIPFRGRKSNITWNIMCVCSFDMLFTYVMSDWEGSANNSRILLECIKHLENKFHMP-------------
        L VD R    F  ++ A+DGTH+   V  +LQ  +  R  N + NIM +C   MLFTY+ +   GS  ++ + L+  +  +++F +P             
Subjt:  LFVDFRSSLVFKDWIDAIDGTHIDASVLQNLQIPFRGRKSNITWNIMCVCSFDMLFTYVMSDWEGSANNSRILLECIKHLENKFHMP-------------

Query:  -KGGFLVPYRSQ-----RYHLRDFRERRHQPRGKEEVFNYRHSSLQNVVERCFGMLK
         K G L PYRS      RYH+  F     +PR K E+FN  H+SL++V+ER F + K
Subjt:  -KGGFLVPYRSQ-----RYHLRDFRERRHQPRGKEEVFNYRHSSLQNVVERCFGMLK

AT5G28730.1 unknown protein2.7e-0426.73Show/hide
Query:  TWNIMCVCSFDMLFTYVMSDWEGSANNSRILLECIKHLENKFHMP--------------KGGFLVPYRSQRYHLRDFRERRHQPRGKEEVFNYRHSSLQN
        ++N++ +C  DMLFTY      GS +++R+L   I   +  FH+P              K G+L PYR +    +D            E  N +     N
Subjt:  TWNIMCVCSFDMLFTYVMSDWEGSANNSRILLECIKHLENKFHMP--------------KGGFLVPYRSQRYHLRDFRERRHQPRGKEEVFNYRHSSLQN

Query:  V
        V
Subjt:  V

AT5G28950.1 unknown protein1.7e-1443.59Show/hide
Query:  FKDWIDAIDGTHIDASVLQNLQIPFRGRKSNITWNIMCVCSFDMLFTYVMSDWEGSANNSRILLECIKHLENKFHMPK
        FKD + AID THI A V Q     FR RK +I+ N++  C+FD+ F YV+S WEGSA++S++L + +    N+  +P+
Subjt:  FKDWIDAIDGTHIDASVLQNLQIPFRGRKSNITWNIMCVCSFDMLFTYVMSDWEGSANNSRILLECIKHLENKFHMPK

AT5G35695.1 CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912)7.4e-1839.32Show/hide
Query:  RKSNITWNIMCVCSFDMLFTYVMSDWEGSANNSRILLECIKHLENKFHMPKGG------FLVPYRSQRYHLRDFRERRHQPRGKEEVFNYRHSSLQNVVE
        RK+N+  +         +F YV+S WEGSA++SR+L + ++    KF++   G      FL P+R  RYHL++F  +R  P    E+FN RH SL+NV+E
Subjt:  RKSNITWNIMCVCSFDMLFTYVMSDWEGSANNSRILLECIKHLENKFHMPKGG------FLVPYRSQRYHLRDFRERRHQPRGKEEVFNYRHSSLQNVVE

Query:  RCFGMLKARFLSLNKCP
        R FG+ K+RF      P
Subjt:  RCFGMLKARFLSLNKCP

AT5G41980.1 CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912)1.1e-1632.45Show/hide
Query:  FKDWIDAIDGTHIDASVLQNLQIPFRGRKSNITWNIMCVCSFDMLFTYVMSDWEGSANNSRILLECIKHLENKFHMPKG-------------GFLVPYRS
        FKD +  +D  HI   V  + Q PFR     +T N++   SFD+ F YV++ WEGSA++ ++L   +    NK  +P+G             GF+ PY  
Subjt:  FKDWIDAIDGTHIDASVLQNLQIPFRGRKSNITWNIMCVCSFDMLFTYVMSDWEGSANNSRILLECIKHLENKFHMPKG-------------GFLVPYRS

Query:  QRYHLRDFRERRHQPRGKEEVFNYRHSSLQNVVERCFGMLKARFLSLNKCP
           + R+           +E+FN RH  L   + R FG LK RF  L   P
Subjt:  QRYHLRDFRERRHQPRGKEEVFNYRHSSLQNVVERCFGMLKARFLSLNKCP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTCTAGCTACTATCTCCAAATGCCGATTTCCAACGATTTTGTCAATCTTTTTAGCATAATCTTGTTTGTAGACTTCCGATCATCTCTCGTCTTCAAGGATTGGAT
TGATGCAATTGACGGAACTCATATTGATGCAAGTGTTCTCCAAAACTTACAAATACCTTTTCGGGGTAGAAAATCTAATATAACATGGAATATAATGTGTGTATGTTCAT
TTGATATGTTATTCACATATGTCATGTCTGATTGGGAAGGATCAGCCAATAATTCTCGCATACTTCTTGAATGTATCAAGCATCTCGAGAACAAATTTCATATGCCTAAA
GGAGGATTTTTAGTACCATATCGCAGTCAAAGATACCATTTGCGAGATTTTAGAGAAAGAAGACATCAACCTCGAGGTAAGGAAGAGGTGTTTAACTATCGACACTCTTC
ACTTCAAAATGTTGTTGAACGTTGTTTTGGCATGTTGAAAGCTCGATTCCTATCTTTAAACAAATGCCCCCTTATCCACTCAAAACACAAAAATATTTACCCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTCTCTAGCTACTATCTCCAAATGCCGATTTCCAACGATTTTGTCAATCTTTTTAGCATAATCTTGTTTGTAGACTTCCGATCATCTCTCGTCTTCAAGGATTGGAT
TGATGCAATTGACGGAACTCATATTGATGCAAGTGTTCTCCAAAACTTACAAATACCTTTTCGGGGTAGAAAATCTAATATAACATGGAATATAATGTGTGTATGTTCAT
TTGATATGTTATTCACATATGTCATGTCTGATTGGGAAGGATCAGCCAATAATTCTCGCATACTTCTTGAATGTATCAAGCATCTCGAGAACAAATTTCATATGCCTAAA
GGAGGATTTTTAGTACCATATCGCAGTCAAAGATACCATTTGCGAGATTTTAGAGAAAGAAGACATCAACCTCGAGGTAAGGAAGAGGTGTTTAACTATCGACACTCTTC
ACTTCAAAATGTTGTTGAACGTTGTTTTGGCATGTTGAAAGCTCGATTCCTATCTTTAAACAAATGCCCCCTTATCCACTCAAAACACAAAAATATTTACCCTTAG
Protein sequenceShow/hide protein sequence
MFSSYYLQMPISNDFVNLFSIILFVDFRSSLVFKDWIDAIDGTHIDASVLQNLQIPFRGRKSNITWNIMCVCSFDMLFTYVMSDWEGSANNSRILLECIKHLENKFHMPK
GGFLVPYRSQRYHLRDFRERRHQPRGKEEVFNYRHSSLQNVVERCFGMLKARFLSLNKCPLIHSKHKNIYP