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Sed0011800 (gene) of Chayote v1 genome

Gene IDSed0011800
OrganismSechium edule (Chayote v1)
Descriptioncysteine-rich and transmembrane domain-containing protein WIH2-like
Genome locationLG08:30068888..30072237
RNA-Seq ExpressionSed0011800
SyntenySed0011800
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR044850 - Cysteine-rich and transmembrane domain-containing protein WIH1/2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581126.1 hypothetical protein SDJN03_21128, partial [Cucurbita argyrosperma subsp. sororia]2.0e-3676.99Show/hide
Query:  MSYPYGYHHPPPETYPPPGYPPPPQPGYPGNPPPPGYPGHPPPPPPHHSYQGYFYDGYQPSAPPPP----PPPPSYHHHHCHYDDRNDCSSFFRGCLATL
        M+YPYGY HPPPETYPPPGY  PPQPGYPG+ P P     PPPPPPH  YQGYFYDGY PSAPPPP    PPPP Y H H HYDDRNDCSSF  GCLATL
Subjt:  MSYPYGYHHPPPETYPPPGYPPPPQPGYPGNPPPPGYPGHPPPPPPHHSYQGYFYDGYQPSAPPPP----PPPPSYHHHHCHYDDRNDCSSFFRGCLATL

Query:  CCCCLLEECLACF
        CCCC+LEECLACF
Subjt:  CCCCLLEECLACF

XP_004145697.1 cysteine-rich and transmembrane domain-containing protein WIH2 [Cucumis sativus]3.3e-3980.73Show/hide
Query:  MSYPYGYHHPPPETYPPPGYPPPPQPGYPGNPPPPGYPGHPPPPPPHHSYQGYFYDGYQPSAPPPPPPPPSYHHHHCHYDDRNDCSSFFRGCLATLCCCC
        MSYPYGY+HPPPETYPPPGY PPPQPGYPG  P        PPPPPH  YQGYFYDGYQPSAPPPPPPPP  HH H HYDDRNDCSSF  GCLATLCCCC
Subjt:  MSYPYGYHHPPPETYPPPGYPPPPQPGYPGNPPPPGYPGHPPPPPPHHSYQGYFYDGYQPSAPPPPPPPPSYHHHHCHYDDRNDCSSFFRGCLATLCCCC

Query:  LLEECLACF
        +LEECLACF
Subjt:  LLEECLACF

XP_008450006.1 PREDICTED: cysteine-rich and transmembrane domain-containing protein A-like [Cucumis melo]1.0e-4080.73Show/hide
Query:  MSYPYGYHHPPPETYPPPGYPPPPQPGYPGNPPPPGYPGHPPPPPPHHSYQGYFYDGYQPSAPPPPPPPPSYHHHHCHYDDRNDCSSFFRGCLATLCCCC
        MSY YGY+HPPPETYPPPGY PPPQPGYPG+         PPPPPPH  YQGYFYDGYQPSAPPPPPPPP YHH H HYDDRNDCSSF  GCLATLCCCC
Subjt:  MSYPYGYHHPPPETYPPPGYPPPPQPGYPGNPPPPGYPGHPPPPPPHHSYQGYFYDGYQPSAPPPPPPPPSYHHHHCHYDDRNDCSSFFRGCLATLCCCC

Query:  LLEECLACF
        +LEECLACF
Subjt:  LLEECLACF

XP_022934109.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Cucurbita moschata]7.5e-3673.68Show/hide
Query:  MSYPYGYHHPPPETYPPPGYPPPPQPGYPGNPPPPGYPGHPP-PPPPHHSYQGYFYDGYQPSAPPPP----PPPPSYHHHHCHYDDRNDCSSFFRGCLAT
        M+YPYGY HPPPETYPPPGY           PP PGYPGH P PPPPH  YQGYFYDGY PSAPPPP    PPPP Y H H HYDDRNDCSSF  GCLAT
Subjt:  MSYPYGYHHPPPETYPPPGYPPPPQPGYPGNPPPPGYPGHPP-PPPPHHSYQGYFYDGYQPSAPPPP----PPPPSYHHHHCHYDDRNDCSSFFRGCLAT

Query:  LCCCCLLEECLACF
        LCCCC+LEECLACF
Subjt:  LCCCCLLEECLACF

XP_038879833.1 cysteine-rich and transmembrane domain-containing protein WIH2 [Benincasa hispida]2.9e-4081.65Show/hide
Query:  MSYPYGYHHPPPETYPPPGYPPPPQPGYPGNPPPPGYPGHPPPPPPHHSYQGYFYDGYQPSAPPPPPPPPSYHHHHCHYDDRNDCSSFFRGCLATLCCCC
        MSYPYGYH PPPETYPPPGY PPPQPGYPG+         PPPPPPH  YQGYFYDGYQPSAPPPPPPPP YHH H HYDDRNDCSSF  GCLATLCCCC
Subjt:  MSYPYGYHHPPPETYPPPGYPPPPQPGYPGNPPPPGYPGHPPPPPPHHSYQGYFYDGYQPSAPPPPPPPPSYHHHHCHYDDRNDCSSFFRGCLATLCCCC

Query:  LLEECLACF
        +LEECLACF
Subjt:  LLEECLACF

TrEMBL top hitse value%identityAlignment
A0A0A0L8F9 Uncharacterized protein1.6e-3980.73Show/hide
Query:  MSYPYGYHHPPPETYPPPGYPPPPQPGYPGNPPPPGYPGHPPPPPPHHSYQGYFYDGYQPSAPPPPPPPPSYHHHHCHYDDRNDCSSFFRGCLATLCCCC
        MSYPYGY+HPPPETYPPPGY PPPQPGYPG  P        PPPPPH  YQGYFYDGYQPSAPPPPPPPP  HH H HYDDRNDCSSF  GCLATLCCCC
Subjt:  MSYPYGYHHPPPETYPPPGYPPPPQPGYPGNPPPPGYPGHPPPPPPHHSYQGYFYDGYQPSAPPPPPPPPSYHHHHCHYDDRNDCSSFFRGCLATLCCCC

Query:  LLEECLACF
        +LEECLACF
Subjt:  LLEECLACF

A0A1S3BP97 cysteine-rich and transmembrane domain-containing protein A-like4.9e-4180.73Show/hide
Query:  MSYPYGYHHPPPETYPPPGYPPPPQPGYPGNPPPPGYPGHPPPPPPHHSYQGYFYDGYQPSAPPPPPPPPSYHHHHCHYDDRNDCSSFFRGCLATLCCCC
        MSY YGY+HPPPETYPPPGY PPPQPGYPG+         PPPPPPH  YQGYFYDGYQPSAPPPPPPPP YHH H HYDDRNDCSSF  GCLATLCCCC
Subjt:  MSYPYGYHHPPPETYPPPGYPPPPQPGYPGNPPPPGYPGHPPPPPPHHSYQGYFYDGYQPSAPPPPPPPPSYHHHHCHYDDRNDCSSFFRGCLATLCCCC

Query:  LLEECLACF
        +LEECLACF
Subjt:  LLEECLACF

A0A6J1EL88 cysteine-rich and transmembrane domain-containing protein WIH2-like6.2e-3673.45Show/hide
Query:  MSYPYGYHHPPPETYPPPGYPPPPQPGYPGNPPPPGYPGHPPPPPPHHSYQGYFYDGYQPSA----PPPPPPPPSYHHHHCHYDDRNDCSSFFRGCLATL
        MSYPY +HH PPETYPPPGY PPPQPGYPGN           PPPPH  YQ YFYDGYQPSA    PPP PPPP YHH H HYDDR++CSSF RGCLATL
Subjt:  MSYPYGYHHPPPETYPPPGYPPPPQPGYPGNPPPPGYPGHPPPPPPHHSYQGYFYDGYQPSA----PPPPPPPPSYHHHHCHYDDRNDCSSFFRGCLATL

Query:  CCCCLLEECLACF
        CCCC+LEECLACF
Subjt:  CCCCLLEECLACF

A0A6J1F1N0 cysteine-rich and transmembrane domain-containing protein WIH2-like3.6e-3673.68Show/hide
Query:  MSYPYGYHHPPPETYPPPGYPPPPQPGYPGNPPPPGYPGHPP-PPPPHHSYQGYFYDGYQPSAPPPP----PPPPSYHHHHCHYDDRNDCSSFFRGCLAT
        M+YPYGY HPPPETYPPPGY           PP PGYPGH P PPPPH  YQGYFYDGY PSAPPPP    PPPP Y H H HYDDRNDCSSF  GCLAT
Subjt:  MSYPYGYHHPPPETYPPPGYPPPPQPGYPGNPPPPGYPGHPP-PPPPHHSYQGYFYDGYQPSAPPPP----PPPPSYHHHHCHYDDRNDCSSFFRGCLAT

Query:  LCCCCLLEECLACF
        LCCCC+LEECLACF
Subjt:  LCCCCLLEECLACF

A0A6J1J313 cysteine-rich and transmembrane domain-containing protein WIH2-like3.6e-3673.68Show/hide
Query:  MSYPYGYHHPPPETYPPPGYPPPPQPGYPGNPPPPGYPGHPP-PPPPHHSYQGYFYDGYQPSAPPPP----PPPPSYHHHHCHYDDRNDCSSFFRGCLAT
        M+YPYGY HPPPETYPPPGY           PP PGYPGH P PPPPH  YQGYFYDGY PSAPPPP    PPPP Y H H HYDDRNDCSSF  GCLAT
Subjt:  MSYPYGYHHPPPETYPPPGYPPPPQPGYPGNPPPPGYPGHPP-PPPPHHSYQGYFYDGYQPSAPPPP----PPPPSYHHHHCHYDDRNDCSSFFRGCLAT

Query:  LCCCCLLEECLACF
        LCCCC+LEECLACF
Subjt:  LCCCCLLEECLACF

SwissProt top hitse value%identityAlignment
Q8S8M0 Cysteine-rich and transmembrane domain-containing protein WIH22.1e-0444.9Show/hide
Query:  PPPETYPPPGYPPPPQPGYPGNPPPPGYP--GHPPPPPPHHSYQGYFYDGYQPSAPPPPPPPPSYHHHHCHYDDRNDCSSFFRGCLATLCCCCLLEEC
        PPP+ YPP GYP    P  P   PP GYP  G+PP   P    QGY   GY P   P  PPPP        +  +     F  GCLA LCCCCLL+ C
Subjt:  PPPETYPPPGYPPPPQPGYPGNPPPPGYP--GHPPPPPPHHSYQGYFYDGYQPSAPPPPPPPPSYHHHHCHYDDRNDCSSFFRGCLATLCCCCLLEEC

Arabidopsis top hitse value%identityAlignment
AT1G12810.1 proline-rich family protein1.2e-1854.26Show/hide
Query:  YHHPPPETYPPPGYPPP-PQPGYPGNPPPPGYP-------GHPPP------PPP-----HHSYQGYFYDG---YQPSAPPPPPPPPSY---HHHHCHYDD
        Y   PPE+YPPPGY    P PGYP  PPPPGYP       G+PPP      PPP        YQGYF  G   +Q   PPPPPPP +Y   HH H HY D
Subjt:  YHHPPPETYPPPGYPPP-PQPGYPGNPPPPGYP-------GHPPP------PPP-----HHSYQGYFYDG---YQPSAPPPPPPPPSY---HHHHCHYDD

Query:  RND-CSSFFRGCLATLCCCCLLEECLACF
         +  C SF RGCLA LCCCCLLEEC  CF
Subjt:  RND-CSSFFRGCLATLCCCCLLEECLACF

AT1G12810.2 proline-rich family protein1.5e-1343.21Show/hide
Query:  YHHPPPETYPPPGYPPP-PQPGYPGNPPPPGYP-------GHPPP------PPP-----HHSYQGYFYDG---YQPSAPPPPPPPPSY---HHHHCHYDD
        Y   PPE+YPPPGY    P PGYP  PPPPGYP       G+PPP      PPP        YQGYF  G   +Q   PPPPPPP +Y   HH H HY D
Subjt:  YHHPPPETYPPPGYPPP-PQPGYPGNPPPPGYP-------GHPPP------PPP-----HHSYQGYFYDG---YQPSAPPPPPPPPSY---HHHHCHYDD

Query:  RND-CSSFFRGC---------------------------------LATLCCCCLLEECLACF
         +  C SF RGC                                 LA LCCCCLLEEC  CF
Subjt:  RND-CSSFFRGC---------------------------------LATLCCCCLLEECLACF

AT2G41420.1 proline-rich family protein1.5e-0544.9Show/hide
Query:  PPPETYPPPGYPPPPQPGYPGNPPPPGYP--GHPPPPPPHHSYQGYFYDGYQPSAPPPPPPPPSYHHHHCHYDDRNDCSSFFRGCLATLCCCCLLEEC
        PPP+ YPP GYP    P  P   PP GYP  G+PP   P    QGY   GY P   P  PPPP        +  +     F  GCLA LCCCCLL+ C
Subjt:  PPPETYPPPGYPPPPQPGYPGNPPPPGYP--GHPPPPPPHHSYQGYFYDGYQPSAPPPPPPPPSYHHHHCHYDDRNDCSSFFRGCLATLCCCCLLEEC

AT3G49845.1 unknown protein1.6e-0748.72Show/hide
Query:  PYGYHHPPPETYPPPGYPPPPQPGYPGNPPPPGYP--GHPPP--PPPHHSY-QGYFYDGYQPSAPP---PP------PPPPSY-HHHHCHYDDRNDCSSF
        P GY  PP E YPP GYPPP   GY    PPP YP  G+PP   PPP   Y QGY   GY P   P   PP      PPPP Y      +  D+ D   F
Subjt:  PYGYHHPPPETYPPPGYPPPPQPGYPGNPPPPGYP--GHPPP--PPPHHSY-QGYFYDGYQPSAPP---PP------PPPPSY-HHHHCHYDDRNDCSSF

Query:  FRGCLATLCCCCLLEEC
          GCLA LCCC LLE C
Subjt:  FRGCLATLCCCCLLEEC

AT5G07740.1 actin binding2.8e-0449.37Show/hide
Query:  PYGYHHPPPETYPPPGY-----PPPPQPGY----PGNPPPPGYPGHPPPPPPHHSYQGYFYDGYQPSAPPPPPPPPSYH
        P  Y  PPP   PPP Y     PPPP P Y    P  PPPPGY   PPPPPP  SY           +PPPPPPPP  H
Subjt:  PYGYHHPPPETYPPPGY-----PPPPQPGY----PGNPPPPGYPGHPPPPPPHHSYQGYFYDGYQPSAPPPPPPPPSYH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGCAACAAATACAGTTCATATGACAGCTAAAAAAGACCCAAATTATTGGTCTGCACTTTGTAATCTTCTTCATTCTTCAATCTCAAGAGTTATGAGTTACCCTTA
CGGCTACCACCATCCTCCGCCGGAAACCTACCCTCCTCCCGGCTACCCTCCGCCGCCACAGCCTGGATATCCCGGGAATCCGCCGCCGCCTGGTTATCCCGGCCATCCTC
CTCCGCCTCCGCCGCATCATTCCTATCAAGGCTATTTCTACGACGGCTATCAGCCATCGGCGCCGCCTCCTCCTCCTCCTCCTCCGTCTTACCATCATCACCACTGTCAC
TACGACGATCGCAACGACTGCTCCTCATTCTTTCGTGGATGTTTAGCTACACTGTGTTGTTGTTGTTTGCTGGAGGAGTGCTTGGCCTGCTTCTGA
mRNA sequenceShow/hide mRNA sequence
AATTAATGTACAATTTCTCATCTAAAGGCCTTTTAAATGATTGCAACAAATACAGTTCATATGACAGCTAAAAAAGACCCAAATTATTGGTCTGCACTTTGTAATCTTCT
TCATTCTTCAATCTCAAGAGTTATGAGTTACCCTTACGGCTACCACCATCCTCCGCCGGAAACCTACCCTCCTCCCGGCTACCCTCCGCCGCCACAGCCTGGATATCCCG
GGAATCCGCCGCCGCCTGGTTATCCCGGCCATCCTCCTCCGCCTCCGCCGCATCATTCCTATCAAGGCTATTTCTACGACGGCTATCAGCCATCGGCGCCGCCTCCTCCT
CCTCCTCCTCCGTCTTACCATCATCACCACTGTCACTACGACGATCGCAACGACTGCTCCTCATTCTTTCGTGGATGTTTAGCTACACTGTGTTGTTGTTGTTTGCTGGA
GGAGTGCTTGGCCTGCTTCTGATAGACGTTGTGAAATCGGTGTTCTTTTTCAGCCTGTTTGTCCACGTGTGTTTGTCTTTGATTATGAAGCAACGCCTGTTCTTGAGTCG
ATTGAAATAAGATTTATAGTTTTCTAGGTTGTGATTGTAAACTTTCTGTGTTGATATCTAAAAGCTCTTATTTATTTGTATGCAATACCTAAACAAATAATAGTTTATGC
TTGTAAACTTGGAATCCCTATTGTTGTCATTCAGATTCAACTTTCTATGAGATTTTTTATGCAAATTTTATGTGGAGCCTTTATTATATAGAAAGGAGAATATGCTTATT
TGAAACTTGGCT
Protein sequenceShow/hide protein sequence
MIATNTVHMTAKKDPNYWSALCNLLHSSISRVMSYPYGYHHPPPETYPPPGYPPPPQPGYPGNPPPPGYPGHPPPPPPHHSYQGYFYDGYQPSAPPPPPPPPSYHHHHCH
YDDRNDCSSFFRGCLATLCCCCLLEECLACF