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Sed0011807 (gene) of Chayote v1 genome

Gene IDSed0011807
OrganismSechium edule (Chayote v1)
Description(R)-mandelonitrile lyase 1-like
Genome locationLG03:45658387..45658961
RNA-Seq ExpressionSed0011807
SyntenySed0011807
Gene Ontology termsGO:0016614 - oxidoreductase activity, acting on CH-OH group of donors (molecular function)
GO:0016829 - lyase activity (molecular function)
GO:0050660 - flavin adenine dinucleotide binding (molecular function)
InterPro domainsIPR036188 - FAD/NAD(P)-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8651660.1 hypothetical protein Csa_021193 [Cucumis sativus]2.9e-3175.27Show/hide
Query:  MELVDKAYQWVEETVVFQPNLSGWNAAFRTALLEAEVGPDNGFDLRHLVGTRTGGSIFDGNGNRHGAVELLNKADPDNINVTIQAMVQKILFS
        MELV+KAY+WVEETVV QP L+ W +AFR++LLE  V PDNGFDLRHLVGT+TGGSIFD  GNRHGAVELLNKA+P NI V I+A VQ+ILFS
Subjt:  MELVDKAYQWVEETVVFQPNLSGWNAAFRTALLEAEVGPDNGFDLRHLVGTRTGGSIFDGNGNRHGAVELLNKADPDNINVTIQAMVQKILFS

XP_011650116.2 (R)-mandelonitrile lyase 1 [Cucumis sativus]2.9e-3175.27Show/hide
Query:  MELVDKAYQWVEETVVFQPNLSGWNAAFRTALLEAEVGPDNGFDLRHLVGTRTGGSIFDGNGNRHGAVELLNKADPDNINVTIQAMVQKILFS
        MELV+KAY+WVEETVV QP L+ W +AFR++LLE  V PDNGFDLRHLVGT+TGGSIFD  GNRHGAVELLNKA+P NI V I+A VQ+ILFS
Subjt:  MELVDKAYQWVEETVVFQPNLSGWNAAFRTALLEAEVGPDNGFDLRHLVGTRTGGSIFDGNGNRHGAVELLNKADPDNINVTIQAMVQKILFS

XP_022153313.1 (R)-mandelonitrile lyase 1-like [Momordica charantia]1.3e-3175.27Show/hide
Query:  MELVDKAYQWVEETVVFQPNLSGWNAAFRTALLEAEVGPDNGFDLRHLVGTRTGGSIFDGNGNRHGAVELLNKADPDNINVTIQAMVQKILFS
        MELV+KAYQWVEETVV +PNLS W +AFR+ALLE+ V PDNGFDLRHLVGTR GGS FDG GNRHGAVELLNKA+P N+ V I+A V++I+FS
Subjt:  MELVDKAYQWVEETVVFQPNLSGWNAAFRTALLEAEVGPDNGFDLRHLVGTRTGGSIFDGNGNRHGAVELLNKADPDNINVTIQAMVQKILFS

XP_038889314.1 (R)-mandelonitrile lyase 1-like [Benincasa hispida]7.6e-3277.42Show/hide
Query:  MELVDKAYQWVEETVVFQPNLSGWNAAFRTALLEAEVGPDNGFDLRHLVGTRTGGSIFDGNGNRHGAVELLNKADPDNINVTIQAMVQKILFS
        MELV+KAYQWVEETV  +P L+ W +AFR+ALLEA V PDNGFDLRHLVGT+TGGSIFD  GNRHGAVELLNKA+P NI V I+A VQKILFS
Subjt:  MELVDKAYQWVEETVVFQPNLSGWNAAFRTALLEAEVGPDNGFDLRHLVGTRTGGSIFDGNGNRHGAVELLNKADPDNINVTIQAMVQKILFS

XP_038889699.1 (R)-mandelonitrile lyase 1-like [Benincasa hispida]1.3e-3173.12Show/hide
Query:  MELVDKAYQWVEETVVFQPNLSGWNAAFRTALLEAEVGPDNGFDLRHLVGTRTGGSIFDGNGNRHGAVELLNKADPDNINVTIQAMVQKILFS
        MELV+KAYQWVE+TVV +P+LS W +AFR ALLEA VGPDNGFDL+HLVGT+TGGSIFD  GNRHGAVELLNKA+P N+ V  QA+V++I+F+
Subjt:  MELVDKAYQWVEETVVFQPNLSGWNAAFRTALLEAEVGPDNGFDLRHLVGTRTGGSIFDGNGNRHGAVELLNKADPDNINVTIQAMVQKILFS

TrEMBL top hitse value%identityAlignment
A0A1S3BSR3 (R)-mandelonitrile lyase 1-like isoform X13.1e-3174.19Show/hide
Query:  MELVDKAYQWVEETVVFQPNLSGWNAAFRTALLEAEVGPDNGFDLRHLVGTRTGGSIFDGNGNRHGAVELLNKADPDNINVTIQAMVQKILFS
        MELV+KAY+WVEETVV QP L  W AAFR+ALLE  + PDNGFDLRHLVGT+TGGSIFD  GNRHGAVELLNKA+P N+ V I+  VQ+ILFS
Subjt:  MELVDKAYQWVEETVVFQPNLSGWNAAFRTALLEAEVGPDNGFDLRHLVGTRTGGSIFDGNGNRHGAVELLNKADPDNINVTIQAMVQKILFS

A0A1S3BSS8 (R)-mandelonitrile lyase 1-like isoform X23.1e-3174.19Show/hide
Query:  MELVDKAYQWVEETVVFQPNLSGWNAAFRTALLEAEVGPDNGFDLRHLVGTRTGGSIFDGNGNRHGAVELLNKADPDNINVTIQAMVQKILFS
        MELV+KAY+WVEETVV QP L  W AAFR+ALLE  + PDNGFDLRHLVGT+TGGSIFD  GNRHGAVELLNKA+P N+ V I+  VQ+ILFS
Subjt:  MELVDKAYQWVEETVVFQPNLSGWNAAFRTALLEAEVGPDNGFDLRHLVGTRTGGSIFDGNGNRHGAVELLNKADPDNINVTIQAMVQKILFS

A0A1S3BTY8 (R)-mandelonitrile lyase 1-like isoform X33.1e-3174.19Show/hide
Query:  MELVDKAYQWVEETVVFQPNLSGWNAAFRTALLEAEVGPDNGFDLRHLVGTRTGGSIFDGNGNRHGAVELLNKADPDNINVTIQAMVQKILFS
        MELV+KAY+WVEETVV QP L  W AAFR+ALLE  + PDNGFDLRHLVGT+TGGSIFD  GNRHGAVELLNKA+P N+ V I+  VQ+ILFS
Subjt:  MELVDKAYQWVEETVVFQPNLSGWNAAFRTALLEAEVGPDNGFDLRHLVGTRTGGSIFDGNGNRHGAVELLNKADPDNINVTIQAMVQKILFS

A0A5A7VHS6 (R)-mandelonitrile lyase 1-like isoform X13.1e-3174.19Show/hide
Query:  MELVDKAYQWVEETVVFQPNLSGWNAAFRTALLEAEVGPDNGFDLRHLVGTRTGGSIFDGNGNRHGAVELLNKADPDNINVTIQAMVQKILFS
        MELV+KAY+WVEETVV QP L  W AAFR+ALLE  + PDNGFDLRHLVGT+TGGSIFD  GNRHGAVELLNKA+P N+ V I+  VQ+ILFS
Subjt:  MELVDKAYQWVEETVVFQPNLSGWNAAFRTALLEAEVGPDNGFDLRHLVGTRTGGSIFDGNGNRHGAVELLNKADPDNINVTIQAMVQKILFS

A0A6J1DH55 (R)-mandelonitrile lyase 1-like6.3e-3275.27Show/hide
Query:  MELVDKAYQWVEETVVFQPNLSGWNAAFRTALLEAEVGPDNGFDLRHLVGTRTGGSIFDGNGNRHGAVELLNKADPDNINVTIQAMVQKILFS
        MELV+KAYQWVEETVV +PNLS W +AFR+ALLE+ V PDNGFDLRHLVGTR GGS FDG GNRHGAVELLNKA+P N+ V I+A V++I+FS
Subjt:  MELVDKAYQWVEETVVFQPNLSGWNAAFRTALLEAEVGPDNGFDLRHLVGTRTGGSIFDGNGNRHGAVELLNKADPDNINVTIQAMVQKILFS

SwissProt top hitse value%identityAlignment
O24243 (R)-mandelonitrile lyase 12.3e-2345.97Show/hide
Query:  MELVDKAYQWVEETVVFQPNLSGWNAAFRTALLEAEVGPDNGFDLRHLVGTRTGGSIFDGNGNRHGAVELLNKADPDNINVTIQAMVQKILFSSTFFTEF
        ++LV+K Y+WVE+ +V +PN   W +      LEA + PDNGF L H  GTR  GS FD NG RH A ELLNK DP+N+ V +QA V+KILFSS      
Subjt:  MELVDKAYQWVEETVVFQPNLSGWNAAFRTALLEAEVGPDNGFDLRHLVGTRTGGSIFDGNGNRHGAVELLNKADPDNINVTIQAMVQKILFSSTFFTEF

Query:  QTYNLIVIRLYKMSVEFSSRNWFI
         T NL  I +     + +S   F+
Subjt:  QTYNLIVIRLYKMSVEFSSRNWFI

O50048 (R)-mandelonitrile lyase 24.6e-2455.32Show/hide
Query:  MELVDKAYQWVEETVVFQPNLSGWNAAFRTALLEAEVGPDNGFDLRHLVGTRTGGSIFDGNGNRHGAVELLNKADPDNINVTIQAMVQKILFSS
        M+LV+K Y WVE+T+VF+P+   W     TA LE  + PDNGF L HL GTR  GS FD NG RH + ELLNK DP+N+ V + A V+KI+FSS
Subjt:  MELVDKAYQWVEETVVFQPNLSGWNAAFRTALLEAEVGPDNGFDLRHLVGTRTGGSIFDGNGNRHGAVELLNKADPDNINVTIQAMVQKILFSS

O82784 (R)-mandelonitrile lyase 42.3e-2353.19Show/hide
Query:  MELVDKAYQWVEETVVFQPNLSGWNAAFRTALLEAEVGPDNGFDLRHLVGTRTGGSIFDGNGNRHGAVELLNKADPDNINVTIQAMVQKILFSS
        ++LV++AY+WVE+ +V++P+   W +   TA LEA V PDNGF L H  GTR  GS FD +G RH + ELLNK DPDN+ V ++A VQKI+FS+
Subjt:  MELVDKAYQWVEETVVFQPNLSGWNAAFRTALLEAEVGPDNGFDLRHLVGTRTGGSIFDGNGNRHGAVELLNKADPDNINVTIQAMVQKILFSS

P52706 (R)-mandelonitrile lyase 14.3e-2252.13Show/hide
Query:  MELVDKAYQWVEETVVFQPNLSGWNAAFRTALLEAEVGPDNGFDLRHLVGTRTGGSIFDGNGNRHGAVELLNKADPDNINVTIQAMVQKILFSS
        M+LV+K Y+WVE+T+VF+PN   W +   TA LEA V P++GF L H  GTR  GS FD  G RH A ELLNK + +N+ V + A V+KI+FS+
Subjt:  MELVDKAYQWVEETVVFQPNLSGWNAAFRTALLEAEVGPDNGFDLRHLVGTRTGGSIFDGNGNRHGAVELLNKADPDNINVTIQAMVQKILFSS

P52707 (R)-mandelonitrile lyase 31.2e-2454.26Show/hide
Query:  MELVDKAYQWVEETVVFQPNLSGWNAAFRTALLEAEVGPDNGFDLRHLVGTRTGGSIFDGNGNRHGAVELLNKADPDNINVTIQAMVQKILFSS
        M+LV++ Y+WVE+T+VF+P+   W     TA LEA + P+NGF + HL GTR  GS FD NG RH + ELLNK DP+N+ V +QA V+KI+FSS
Subjt:  MELVDKAYQWVEETVVFQPNLSGWNAAFRTALLEAEVGPDNGFDLRHLVGTRTGGSIFDGNGNRHGAVELLNKADPDNINVTIQAMVQKILFSS

Arabidopsis top hitse value%identityAlignment
AT1G12570.1 Glucose-methanol-choline (GMC) oxidoreductase family protein2.9e-2152.22Show/hide
Query:  LVDKAYQWVEETVVFQPNLSGWNAAFRTALLEAEVGPDNGFDLRHLVGTRTGGSIFDGNGNRHGAVELLNKADPDNINVTIQAMVQKILF
        L +++YQWVE  V FQP +  W  A R  LLEA + P+NGF   H+ GT+ GG+IFD NGNRH A +LL  ADP  I V + A V +ILF
Subjt:  LVDKAYQWVEETVVFQPNLSGWNAAFRTALLEAEVGPDNGFDLRHLVGTRTGGSIFDGNGNRHGAVELLNKADPDNINVTIQAMVQKILF

AT3G56060.1 Glucose-methanol-choline (GMC) oxidoreductase family protein2.9e-2153.33Show/hide
Query:  VDKAYQWVEETVVFQPNLSGWNAAFRTALLEAEVGPDNGFDLRHLVGTRTGGSIFDGNGNRHGAVELLNKADPDNINVTIQAMVQKILFS
        V+ AY+WVE+ VVF+P ++ W +AFR  LLEA V P NGF   H+VGT+ GG+IFD +G+RH A  LL  A+P+ I V + A V KILF+
Subjt:  VDKAYQWVEETVVFQPNLSGWNAAFRTALLEAEVGPDNGFDLRHLVGTRTGGSIFDGNGNRHGAVELLNKADPDNINVTIQAMVQKILFS

AT5G51930.1 Glucose-methanol-choline (GMC) oxidoreductase family protein8.4e-2148.94Show/hide
Query:  MELVDKAYQWVEETVVFQPNLSGWNAAFRTALLEAEVGPDNGFDLRHLVGTRTGGSIFDGNGNRHGAVELLNKADPDNINVTIQAMVQKILFSS
        ME V+ AY+WVE+ +VF+P +  W  AF+  LLEA   PDNGF   H+ GT+ GG+IFD  G+RH A  LL  A+P+ I V + A V K+LF++
Subjt:  MELVDKAYQWVEETVVFQPNLSGWNAAFRTALLEAEVGPDNGFDLRHLVGTRTGGSIFDGNGNRHGAVELLNKADPDNINVTIQAMVQKILFSS

AT5G51950.1 Glucose-methanol-choline (GMC) oxidoreductase family protein4.9e-2143.51Show/hide
Query:  VDKAYQWVEETVVFQPNLSGWNAAFRTALLEAEVGPDNGFDLRHLVGTRTGGSIFDGNGNRHGAVELLNKADPDNINVTIQAMVQKILFSSTFFTEFQTY
        V+ AY+WVE+ V FQP + GW  AF+  LLEA   P NGF   H+ GT+ GG+IFD  G+RH A +LL  A+P NI V + A V KILF++      + Y
Subjt:  VDKAYQWVEETVVFQPNLSGWNAAFRTALLEAEVGPDNGFDLRHLVGTRTGGSIFDGNGNRHGAVELLNKADPDNINVTIQAMVQKILFSSTFFTEFQTY

Query:  NLIVIR----LYKMSVEFSSRNWFICNWGFI
         +I       L+K  +E +S N  I + G I
Subjt:  NLIVIR----LYKMSVEFSSRNWFICNWGFI

AT5G51950.2 Glucose-methanol-choline (GMC) oxidoreductase family protein4.9e-2143.51Show/hide
Query:  VDKAYQWVEETVVFQPNLSGWNAAFRTALLEAEVGPDNGFDLRHLVGTRTGGSIFDGNGNRHGAVELLNKADPDNINVTIQAMVQKILFSSTFFTEFQTY
        V+ AY+WVE+ V FQP + GW  AF+  LLEA   P NGF   H+ GT+ GG+IFD  G+RH A +LL  A+P NI V + A V KILF++      + Y
Subjt:  VDKAYQWVEETVVFQPNLSGWNAAFRTALLEAEVGPDNGFDLRHLVGTRTGGSIFDGNGNRHGAVELLNKADPDNINVTIQAMVQKILFSSTFFTEFQTY

Query:  NLIVIR----LYKMSVEFSSRNWFICNWGFI
         +I       L+K  +E +S N  I + G I
Subjt:  NLIVIR----LYKMSVEFSSRNWFICNWGFI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTTGGTGGACAAGGCTTACCAATGGGTTGAAGAAACTGTGGTTTTTCAGCCCAATTTGAGTGGTTGGAATGCTGCTTTTAGAACTGCCCTATTGGAAGCTGAGGT
TGGCCCTGATAATGGATTTGATTTGAGGCACCTTGTGGGGACTAGAACTGGTGGCTCCATCTTTGATGGCAATGGAAATAGACATGGAGCTGTGGAGCTTCTCAACAAAG
CAGACCCCGACAATATTAATGTTACAATCCAAGCCATGGTCCAAAAAATCCTCTTCTCTAGTACTTTCTTTACCGAGTTTCAAACCTATAATCTCATAGTGATTAGATTA
TACAAAATGTCAGTAGAGTTCTCTTCTCGTAATTGGTTTATCTGCAACTGGGGTTTCATATTTGGATCAAAATGGAAAGTTGCATACAGCATTCATCCGAAACAAAAGAG
AGATTATTTTGAGTGCTGGAGCCATCGGAAGCCCTCAACTTCTCCTTCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGTTGGTGGACAAGGCTTACCAATGGGTTGAAGAAACTGTGGTTTTTCAGCCCAATTTGAGTGGTTGGAATGCTGCTTTTAGAACTGCCCTATTGGAAGCTGAGGT
TGGCCCTGATAATGGATTTGATTTGAGGCACCTTGTGGGGACTAGAACTGGTGGCTCCATCTTTGATGGCAATGGAAATAGACATGGAGCTGTGGAGCTTCTCAACAAAG
CAGACCCCGACAATATTAATGTTACAATCCAAGCCATGGTCCAAAAAATCCTCTTCTCTAGTACTTTCTTTACCGAGTTTCAAACCTATAATCTCATAGTGATTAGATTA
TACAAAATGTCAGTAGAGTTCTCTTCTCGTAATTGGTTTATCTGCAACTGGGGTTTCATATTTGGATCAAAATGGAAAGTTGCATACAGCATTCATCCGAAACAAAAGAG
AGATTATTTTGAGTGCTGGAGCCATCGGAAGCCCTCAACTTCTCCTTCTTAG
Protein sequenceShow/hide protein sequence
MELVDKAYQWVEETVVFQPNLSGWNAAFRTALLEAEVGPDNGFDLRHLVGTRTGGSIFDGNGNRHGAVELLNKADPDNINVTIQAMVQKILFSSTFFTEFQTYNLIVIRL
YKMSVEFSSRNWFICNWGFIFGSKWKVAYSIHPKQKRDYFECWSHRKPSTSPS