CuGenDBv2

Gene ID	Sed0011841
Organism	Sechium edule (Chayote v1)
Description	nuclear pore complex protein NUP1-like isoform X1
Genome location	LG06:43839795..43845215
RNA-Seq Expression	Sed0011841
Synteny	Sed0011841
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7032030.1 Nuclear pore complex protein NUP1, partial [Cucurbita argyrosperma subsp. argyrosperma]

0.0e+00

62.59

Show/hide

Query:  MATARKQQIQEEEEEEEWLRTAGKFTDGRFLRKSPAKPYDRPPA---PTGKNSWILKLVDPAQRLISSGSQMLSSSAFR--------RLASRESSQSRKD
        MATAR    + +  EEE LRTAGKF D RF RK P KPYDRPP     +G NSWILKLVDPAQRLISSGSQML SS FR        R +S ESSQSR+D
Subjt:  MATARKQQIQEEEEEEEWLRTAGKFTDGRFLRKSPAKPYDRPPA---PTGKNSWILKLVDPAQRLISSGSQMLSSSAFR--------RLASRESSQSRKD

Query:  DKKEDGTVPFEFQVEETNVVENWDKSEQFGMMELERTMKQKTFTRSQIAHLTALLHSRTVDLPVEIEEKKFEFISSIPKSIRKEFDEVPNSEVTMDRQSI
        DKK D T PFE QV   NV +N +++++F M+ELE+ MKQKTFTRS+I HLTAL+HS+ VDLP   EEK+ +FISSIP+S R EF ++PNSEV M RQS 
Subjt:  DKKEDGTVPFEFQVEETNVVENWDKSEQFGMMELERTMKQKTFTRSQIAHLTALLHSRTVDLPVEIEEKKFEFISSIPKSIRKEFDEVPNSEVTMDRQSI

Query:  STPILTSSVLDEDISSPAEIARAYMHSKLRKVCPSIQSSRATRLGENSAGSNSQSFSSKSTDLLLVPSTTTQGLKRRSSFSYSHIGSILPPRSIRQKRNI
         TPIL+SSVLDEDISSPAEIARAYM S+  K+CPS+ S RA  LGENSA   S SFSSKSTD+LLVPS+T QGLKRRSSF  +HI   +P R I QK NI
Subjt:  STPILTSSVLDEDISSPAEIARAYMHSKLRKVCPSIQSSRATRLGENSAGSNSQSFSSKSTDLLLVPSTTTQGLKRRSSFSYSHIGSILPPRSIRQKRNI

Query:  HLSKGLSLPISSRPNSVPVDGLSFDASQSSKFAKVRHFQSPIRNLQLPLKPKISFPRKSIMNVESNSITGAGSSSIYTPS-YHVMASKILEQ---LTPSK
        HLSKGLSLP+S+RP SVPVD LSFDASQSSKF KV +F S I N QL LKPK +  RK IMNVES++I GAGSSSIYTPS  + MASKILEQ   LTP K
Subjt:  HLSKGLSLPISSRPNSVPVDGLSFDASQSSKFAKVRHFQSPIRNLQLPLKPKISFPRKSIMNVESNSITGAGSSSIYTPS-YHVMASKILEQ---LTPSK

Query:  KKVSALSQLPVGEKAPLKLSPFTIGEHQRNVKDVDLP-SEEFVHEEKQSNGLHWIPYHDNQDDTFQNREKPENMKPLDPHHRCALLKNSGSIGCNNDSTN
        +KV    +LPVGE +P KLSPFT+  H + VKDVDLP  EE VH+ KQS  LH +PYHDNQ++T QN+EK ENMKP DPHHRCALLK+SGSIG + DS  
Subjt:  KKVSALSQLPVGEKAPLKLSPFTIGEHQRNVKDVDLP-SEEFVHEEKQSNGLHWIPYHDNQDDTFQNREKPENMKPLDPHHRCALLKNSGSIGCNNDSTN

Query:  NLEVPACAVVKSIIQPPVNKPAFQMV-PDKDSLDHDESS-DHIVPATAEVIESDNCLALRQITANEALAPANSQTTSEVIVDSPLNRSSDSKTFDERIDE
        +L VPA AVVKSIIQPP NK AFQM+ PDKD +DHDESS D + PATAE  E D  LALRQ TANEALAP+  QT SEVIV SPLNRSSD KT +  + +
Subjt:  NLEVPACAVVKSIIQPPVNKPAFQMV-PDKDSLDHDESS-DHIVPATAEVIESDNCLALRQITANEALAPANSQTTSEVIVDSPLNRSSDSKTFDERIDE

Query:  DMVTRFTLQNASSLATASQPETIDSAPTNSLGSKDLPENKQNDSPDFSFENNISPRK--HTSLTTFDDGNKDASPTESHFAPKNCNGAPCPYTQSNPASS
        DM T FT Q A      SQPETIDSAPTNS G+ DLPE K+ DSP FSF NN+SPRK  + S T FD GNKDAS TE   AP+N NGAP PYTQ NPASS
Subjt:  DMVTRFTLQNASSLATASQPETIDSAPTNSLGSKDLPENKQNDSPDFSFENNISPRK--HTSLTTFDDGNKDASPTESHFAPKNCNGAPCPYTQSNPASS

Query:  YSDVQESVYLNADISSNHELDRSWGTCNDAF------------SFWSSARTQSSTNGPSISCPSLFSSHGSSIASTSQSSSRNIFLSA----------TT
        YSDVQ SVYLNA  SSNH+LD SWGTCNDAF            SF S+AR QS  NG SISCPS +SS      S  QSSSR IFLSA          T 
Subjt:  YSDVQESVYLNADISSNHELDRSWGTCNDAF------------SFWSSARTQSSTNGPSISCPSLFSSHGSSIASTSQSSSRNIFLSA----------TT

Query:  DNHPSTTNLAPSFAPSTTGLVTYEEQIKQDASPNKENDTYFNSITTPEISNNSMSSFGAAATPSSMND-RLGTPTVINATELGAQEVSAGKEFIANAERA
          HPSTTN+  S APS  GL T+E++IKQDAS +  N+TYF+SI+TP  S+ +M SF   ATPS +N+ +L TPTV +A EL AQ  SAGKEF ANAE+ 
Subjt:  DNHPSTTNLAPSFAPSTTGLVTYEEQIKQDASPNKENDTYFNSITTPEISNNSMSSFGAAATPSSMND-RLGTPTVINATELGAQEVSAGKEFIANAERA

Query:  PMVSPSSMLNASSGMAGKSSDSSAISFGCSSSASELFNQGSIPSEFPINGLTSDPATSTIGTSYDATSSTRLGFESSTVASFSSICPTTSSATALVGSSL
         ++  S M +ASS +AGK+S SS ISFGCSS ASELF+ GS PSEFPI G T  PATST    + +T  T LGFE+ T ASFSSIC TTS+A A+ GSS 
Subjt:  PMVSPSSMLNASSGMAGKSSDSSAISFGCSSSASELFNQGSIPSEFPINGLTSDPATSTIGTSYDATSSTRLGFESSTVASFSSICPTTSSATALVGSSL

Query:  KPVSSNSHPKVAIRVSSGNNQFEARGISKDNAPLFRQKPIPPLSSGLSFRPAASVLNPSQVGKRQNYS-----------SLEAKARGSFTLSVGDGDGDK
        K VSSNSHP VA RVS+GN   E +G SKDN P+F QKP+PP SSG SF  A S  NP  V K+Q  +           S   +ARGSF LS   G G+K
Subjt:  KPVSSNSHPKVAIRVSSGNNQFEARGISKDNAPLFRQKPIPPLSSGLSFRPAASVLNPSQVGKRQNYS-----------SLEAKARGSFTLSVGDGDGDK

Query:  ARRRFVKFRRKK
        A RR VK +RKK
Subjt:  ARRRFVKFRRKK

XP_022956526.1 nuclear pore complex protein NUP1-like isoform X1 [Cucurbita moschata]

0.0e+00

62.56

Show/hide

Query:  MATARKQQIQEEEEEEEWLRTAGKFTDGRFLRKSPAKPYDRPPA---PTGKNSWILKLVDPAQRLISSGSQMLSSSAFR--------RLASRESSQSRKD
        MATAR    + +  EEE LRTAGKF D RF RK P KPYDRPP     +G NSWILKLVDPAQRLISSGSQML SS FR        R +S ESSQSR+D
Subjt:  MATARKQQIQEEEEEEEWLRTAGKFTDGRFLRKSPAKPYDRPPA---PTGKNSWILKLVDPAQRLISSGSQMLSSSAFR--------RLASRESSQSRKD

Query:  DKKEDGTVPFEFQVEETNVVENWDKSEQFGMMELERTMKQKTFTRSQIAHLTALLHSRTVDLPVEIEEKKFEFISSIPKSIRKEFDEVPNSEVTMDRQSI
        DKK D T PFE QV   NV +N +++++F M+ELE+ MKQKTFTRS+I HLTAL+HS+ VDLP   EEK+ +FISSIP+S R EF ++PNSEV M RQS 
Subjt:  DKKEDGTVPFEFQVEETNVVENWDKSEQFGMMELERTMKQKTFTRSQIAHLTALLHSRTVDLPVEIEEKKFEFISSIPKSIRKEFDEVPNSEVTMDRQSI

Query:  STPILTSSVLDEDISSPAEIARAYMHSKLRKVCPSIQSSRATRLGENSAGSNSQSFSSKSTDLLLVPSTTTQGLKRRSSFSYSHIGSILPPRSIRQKRNI
         TPIL+SSVLDEDISSPAEIARAYM S+  K+CPS+ S RA  LGENSA   S SFSSKSTD+LLVPS+T QGLKRRSSF  +HIG  +P R I QK NI
Subjt:  STPILTSSVLDEDISSPAEIARAYMHSKLRKVCPSIQSSRATRLGENSAGSNSQSFSSKSTDLLLVPSTTTQGLKRRSSFSYSHIGSILPPRSIRQKRNI

Query:  HLSKGLSLPISSRPNSVPVDGLSFDASQSSKFAKVRHFQSPIRNLQLPLKPKISFPRKSIMNVESNSITGAGSSSIYTPS-YHVMASKILEQ---LTPSK
        HLSKG SLP+S+RP SVPVD LSFDASQSSKF KV +F S I N QL LKPK +  RK IMNVES++I GAGSSSIYTPS  + MASKILEQ   LTP K
Subjt:  HLSKGLSLPISSRPNSVPVDGLSFDASQSSKFAKVRHFQSPIRNLQLPLKPKISFPRKSIMNVESNSITGAGSSSIYTPS-YHVMASKILEQ---LTPSK

Query:  KKVSALSQLPVGEKAPLKLSPFTIGEHQRNVKDVDLP-SEEFVHEEKQSNGLHWIPYHDNQDDTFQNREKPENMKPLDPHHRCALLKNSGSIGCNNDSTN
        +KV    +LPVGE +P KLSPFT+  H + VKDVDLP  EE VH+ KQS  LH +PYHDNQ++T QN+EK ENMKP DPHHRCALLK+SGSIG + DS  
Subjt:  KKVSALSQLPVGEKAPLKLSPFTIGEHQRNVKDVDLP-SEEFVHEEKQSNGLHWIPYHDNQDDTFQNREKPENMKPLDPHHRCALLKNSGSIGCNNDSTN

Query:  NLEVPACAVVKSIIQPPVNKPAFQMVPDKDSLDHDESS-DHIVPATAEVIESDNCLALRQITANEALAPANSQTTSEVIVDSPLNRSSDSKTFDERIDED
        +L VPA AVVKSIIQPP NK AFQM PDKD +D DESS D + PATAE  E D  LA+RQ TANE LAP+  QT SEVIV SPLNRSSD KT +  + +D
Subjt:  NLEVPACAVVKSIIQPPVNKPAFQMVPDKDSLDHDESS-DHIVPATAEVIESDNCLALRQITANEALAPANSQTTSEVIVDSPLNRSSDSKTFDERIDED

Query:  MVTRFTLQNASSLATASQPETIDSAPTNSLGSKDLPENKQNDSPDFSFENNISPRK--HTSLTTFDDGNKDASPTESHFAPKNCNGAPCPYTQSNPASSY
        M T FT Q A      SQPETIDSAPTNS G+ DLPE K+ DSP FSF NN+SPRK  + S T FD GNKDAS TE   AP+N NGAP PYTQ NPASSY
Subjt:  MVTRFTLQNASSLATASQPETIDSAPTNSLGSKDLPENKQNDSPDFSFENNISPRK--HTSLTTFDDGNKDASPTESHFAPKNCNGAPCPYTQSNPASSY

Query:  SDVQESVYLNADISSNHELDRSWGTCNDAF------------SFWSSARTQSSTNGPSISCPSLFSSHGSSIASTSQSSSRNIFLSA----------TTD
        SDVQ SVYLNA  SSNH+LD SWGTCNDAF            SF S+AR QS  NG SISCPS +SS      S  QSSSR IFLSA          T  
Subjt:  SDVQESVYLNADISSNHELDRSWGTCNDAF------------SFWSSARTQSSTNGPSISCPSLFSSHGSSIASTSQSSSRNIFLSA----------TTD

Query:  NHPSTTNLAPSFAPSTTGLVTYEEQIKQDASPNKENDTYFNSITTPEISNNSMSSFGAAATPSSMND-RLGTPTVINATELGAQEVSAGKEFIANAERAP
         HPSTTN+  S APS  GL T+E++IKQDAS +  N+TYF+SI+TP  S+ +M SF   ATPS +N+ +L TPTV +A EL AQ  SAGKEF ANAE+  
Subjt:  NHPSTTNLAPSFAPSTTGLVTYEEQIKQDASPNKENDTYFNSITTPEISNNSMSSFGAAATPSSMND-RLGTPTVINATELGAQEVSAGKEFIANAERAP

Query:  MVSPSSMLNASSGMAGKSSDSSAISFGCSSSASELFNQGSIPSEFPINGLTSDPATSTIGTSYDATSSTRLGFESSTVASFSSICPTTSSATALVGSSLK
        ++  S M +ASS MAGK+S SS ISFGCSS ASELF+ GS PSEFPI G T  PATST    + +T  T LGFES T ASFSSIC TTS+A A+  SS K
Subjt:  MVSPSSMLNASSGMAGKSSDSSAISFGCSSSASELFNQGSIPSEFPINGLTSDPATSTIGTSYDATSSTRLGFESSTVASFSSICPTTSSATALVGSSLK

Query:  PVSSNSHPKVAIRVSSGNNQFEARGISKDNAPLFRQKPIPPLSSGLSFRPAASVLNPSQVGKRQNYS-----------SLEAKARGSFTLSVGDGDGDKA
         VSSNSHP VA RVS+GNN  E +G SKDN P+F QKP+PP SSG SF  A S  NP  V K+Q  +           S   +ARGSF LS   G G+KA
Subjt:  PVSSNSHPKVAIRVSSGNNQFEARGISKDNAPLFRQKPIPPLSSGLSFRPAASVLNPSQVGKRQNYS-----------SLEAKARGSFTLSVGDGDGDKA

Query:  RRRFVKFRRKK
         RR VK +RKK
Subjt:  RRRFVKFRRKK

XP_022956529.1 nuclear pore complex protein NUP1-like isoform X2 [Cucurbita moschata]

0.0e+00

62.2

Show/hide

Query:  MATARKQQIQEEEEEEEWLRTAGKFTDGRFLRKSPAKPYDRPPA---PTGKNSWILKLVDPAQRLISSGSQMLSSSAFR--------RLASRESSQSRKD
        MATAR    + +  EEE LRTAGKF D RF RK P KPYDRPP     +G NSWILKLVDPAQRLISSGSQML SS FR        R +S ESSQSR+D
Subjt:  MATARKQQIQEEEEEEEWLRTAGKFTDGRFLRKSPAKPYDRPPA---PTGKNSWILKLVDPAQRLISSGSQMLSSSAFR--------RLASRESSQSRKD

Query:  DKKEDGTVPFEFQVEETNVVENWDKSEQFGMMELERTMKQKTFTRSQIAHLTALLHSRTVDLPVEIEEKKFEFISSIPKSIRKEFDEVPNSEVTMDRQSI
        DKK D T      V   NV +N +++++F M+ELE+ MKQKTFTRS+I HLTAL+HS+ VDLP   EEK+ +FISSIP+S R EF ++PNSEV M RQS 
Subjt:  DKKEDGTVPFEFQVEETNVVENWDKSEQFGMMELERTMKQKTFTRSQIAHLTALLHSRTVDLPVEIEEKKFEFISSIPKSIRKEFDEVPNSEVTMDRQSI

Query:  STPILTSSVLDEDISSPAEIARAYMHSKLRKVCPSIQSSRATRLGENSAGSNSQSFSSKSTDLLLVPSTTTQGLKRRSSFSYSHIGSILPPRSIRQKRNI
         TPIL+SSVLDEDISSPAEIARAYM S+  K+CPS+ S RA  LGENSA   S SFSSKSTD+LLVPS+T QGLKRRSSF  +HIG  +P R I QK NI
Subjt:  STPILTSSVLDEDISSPAEIARAYMHSKLRKVCPSIQSSRATRLGENSAGSNSQSFSSKSTDLLLVPSTTTQGLKRRSSFSYSHIGSILPPRSIRQKRNI

Query:  HLSKGLSLPISSRPNSVPVDGLSFDASQSSKFAKVRHFQSPIRNLQLPLKPKISFPRKSIMNVESNSITGAGSSSIYTPS-YHVMASKILEQ---LTPSK
        HLSKG SLP+S+RP SVPVD LSFDASQSSKF KV +F S I N QL LKPK +  RK IMNVES++I GAGSSSIYTPS  + MASKILEQ   LTP K
Subjt:  HLSKGLSLPISSRPNSVPVDGLSFDASQSSKFAKVRHFQSPIRNLQLPLKPKISFPRKSIMNVESNSITGAGSSSIYTPS-YHVMASKILEQ---LTPSK

Query:  KKVSALSQLPVGEKAPLKLSPFTIGEHQRNVKDVDLP-SEEFVHEEKQSNGLHWIPYHDNQDDTFQNREKPENMKPLDPHHRCALLKNSGSIGCNNDSTN
        +KV    +LPVGE +P KLSPFT+  H + VKDVDLP  EE VH+ KQS  LH +PYHDNQ++T QN+EK ENMKP DPHHRCALLK+SGSIG + DS  
Subjt:  KKVSALSQLPVGEKAPLKLSPFTIGEHQRNVKDVDLP-SEEFVHEEKQSNGLHWIPYHDNQDDTFQNREKPENMKPLDPHHRCALLKNSGSIGCNNDSTN

Query:  NLEVPACAVVKSIIQPPVNKPAFQMVPDKDSLDHDESS-DHIVPATAEVIESDNCLALRQITANEALAPANSQTTSEVIVDSPLNRSSDSKTFDERIDED
        +L VPA AVVKSIIQPP NK AFQM PDKD +D DESS D + PATAE  E D  LA+RQ TANE LAP+  QT SEVIV SPLNRSSD KT +  + +D
Subjt:  NLEVPACAVVKSIIQPPVNKPAFQMVPDKDSLDHDESS-DHIVPATAEVIESDNCLALRQITANEALAPANSQTTSEVIVDSPLNRSSDSKTFDERIDED

Query:  MVTRFTLQNASSLATASQPETIDSAPTNSLGSKDLPENKQNDSPDFSFENNISPRK--HTSLTTFDDGNKDASPTESHFAPKNCNGAPCPYTQSNPASSY
        M T FT Q A      SQPETIDSAPTNS G+ DLPE K+ DSP FSF NN+SPRK  + S T FD GNKDAS TE   AP+N NGAP PYTQ NPASSY
Subjt:  MVTRFTLQNASSLATASQPETIDSAPTNSLGSKDLPENKQNDSPDFSFENNISPRK--HTSLTTFDDGNKDASPTESHFAPKNCNGAPCPYTQSNPASSY

Query:  SDVQESVYLNADISSNHELDRSWGTCNDAF------------SFWSSARTQSSTNGPSISCPSLFSSHGSSIASTSQSSSRNIFLSA----------TTD
        SDVQ SVYLNA  SSNH+LD SWGTCNDAF            SF S+AR QS  NG SISCPS +SS      S  QSSSR IFLSA          T  
Subjt:  SDVQESVYLNADISSNHELDRSWGTCNDAF------------SFWSSARTQSSTNGPSISCPSLFSSHGSSIASTSQSSSRNIFLSA----------TTD

Query:  NHPSTTNLAPSFAPSTTGLVTYEEQIKQDASPNKENDTYFNSITTPEISNNSMSSFGAAATPSSMND-RLGTPTVINATELGAQEVSAGKEFIANAERAP
         HPSTTN+  S APS  GL T+E++IKQDAS +  N+TYF+SI+TP  S+ +M SF   ATPS +N+ +L TPTV +A EL AQ  SAGKEF ANAE+  
Subjt:  NHPSTTNLAPSFAPSTTGLVTYEEQIKQDASPNKENDTYFNSITTPEISNNSMSSFGAAATPSSMND-RLGTPTVINATELGAQEVSAGKEFIANAERAP

Query:  MVSPSSMLNASSGMAGKSSDSSAISFGCSSSASELFNQGSIPSEFPINGLTSDPATSTIGTSYDATSSTRLGFESSTVASFSSICPTTSSATALVGSSLK
        ++  S M +ASS MAGK+S SS ISFGCSS ASELF+ GS PSEFPI G T  PATST    + +T  T LGFES T ASFSSIC TTS+A A+  SS K
Subjt:  MVSPSSMLNASSGMAGKSSDSSAISFGCSSSASELFNQGSIPSEFPINGLTSDPATSTIGTSYDATSSTRLGFESSTVASFSSICPTTSSATALVGSSLK

Query:  PVSSNSHPKVAIRVSSGNNQFEARGISKDNAPLFRQKPIPPLSSGLSFRPAASVLNPSQVGKRQNYS-----------SLEAKARGSFTLSVGDGDGDKA
         VSSNSHP VA RVS+GNN  E +G SKDN P+F QKP+PP SSG SF  A S  NP  V K+Q  +           S   +ARGSF LS   G G+KA
Subjt:  PVSSNSHPKVAIRVSSGNNQFEARGISKDNAPLFRQKPIPPLSSGLSFRPAASVLNPSQVGKRQNYS-----------SLEAKARGSFTLSVGDGDGDKA

Query:  RRRFVKFRRKK
         RR VK +RKK
Subjt:  RRRFVKFRRKK

XP_023528132.1 nuclear pore complex protein NUP1-like isoform X1 [Cucurbita pepo subsp. pepo]

0.0e+00

62.47

Show/hide

Query:  MATARKQQIQEEEEEEEWLRTAGKFTDGRFLRKSPAKPYDRPPA---PTGKNSWILKLVDPAQRLISSGSQMLSSSAFR--------RLASRESSQSRKD
        M TAR+Q    +  EEE LRTAGKF D RF RK P KPYDRPP     +G NSWILKLVDPAQRLISSGSQML SS FR        R++S ESSQSR+D
Subjt:  MATARKQQIQEEEEEEEWLRTAGKFTDGRFLRKSPAKPYDRPPA---PTGKNSWILKLVDPAQRLISSGSQMLSSSAFR--------RLASRESSQSRKD

Query:  DKKEDGTVPFEFQVEETNVVENWDKSEQFGMMELERTMKQKTFTRSQIAHLTALLHSRTVDLPVEIEEKKFEFISSIPKSIRKEFDEVPNSEVTMDRQSI
        DKK D T PFE QV   NV +N +++++F M+ELE+ MKQKTFTRS+I HLTAL+HS+ VDLP   EEK+ +FISSIP+S R EF ++PNSEV M RQS 
Subjt:  DKKEDGTVPFEFQVEETNVVENWDKSEQFGMMELERTMKQKTFTRSQIAHLTALLHSRTVDLPVEIEEKKFEFISSIPKSIRKEFDEVPNSEVTMDRQSI

Query:  STPILTSSVLDEDISSPAEIARAYMHSKLRKVCPSIQSSRATRLGENSAGSNSQSFSSKSTDLLLVPSTTTQGLKRRSSFSYSHIGSILPPRSIRQKRNI
         TPIL+SSVLDEDISSPA+IARAYM S+  K+CPS+ S RA  LGENSAG  S SFSSKS D+LLVPS+T+QGLKRRSSF ++HIG  +P R IRQK NI
Subjt:  STPILTSSVLDEDISSPAEIARAYMHSKLRKVCPSIQSSRATRLGENSAGSNSQSFSSKSTDLLLVPSTTTQGLKRRSSFSYSHIGSILPPRSIRQKRNI

Query:  HLSKGLSLPISSRPNSVPVDGLSFDASQSSKFAKVRHFQSPIRNLQLPLKPKISFPRKSIMNVESNSITGAGSSSIYTPS-YHVMASKILEQ---LTPSK
         LSKGLSLP+S+RP SVPVD LSFDASQSSKF KV +F S I N QL  KPK +  RK IMNVES++I GAGSSSIYTPS  + MASKILEQ   LTP K
Subjt:  HLSKGLSLPISSRPNSVPVDGLSFDASQSSKFAKVRHFQSPIRNLQLPLKPKISFPRKSIMNVESNSITGAGSSSIYTPS-YHVMASKILEQ---LTPSK

Query:  KKVSALSQLPVGEKAPLKLSPFTIGEHQRNVKDVDLP-SEEFVHEEKQSNGLHWIPYHDNQDDTFQNREKPENMKPLDPHHRCALLKNSGSIGCNNDSTN
        +KV    +LPVGE +P KLSPFT+  H + VKDVDLP  EE VH+ KQS  LH +PYHDNQ++T QN+EK ENMKP DPHHRCALLK+SGSIG + DS  
Subjt:  KKVSALSQLPVGEKAPLKLSPFTIGEHQRNVKDVDLP-SEEFVHEEKQSNGLHWIPYHDNQDDTFQNREKPENMKPLDPHHRCALLKNSGSIGCNNDSTN

Query:  NLEVPACAVVKSIIQPPVNKPAFQMVPDKDSLDHDESS-DHIVPATAEVIESDNCLALRQITANEALAPANSQTTSEVIVDSPLNRSSDSKTFDERIDED
        +L VPA AVVKSIIQPP NK AFQM PDKD +DHDESS D I PATAE  E D  LA+RQ TANEAL P+ SQT SEVIVDSPLNRSSD KT +  + +D
Subjt:  NLEVPACAVVKSIIQPPVNKPAFQMVPDKDSLDHDESS-DHIVPATAEVIESDNCLALRQITANEALAPANSQTTSEVIVDSPLNRSSDSKTFDERIDED

Query:  MVTRFTLQNASSLATASQPETIDSAPTNSLGSKDLPENKQNDSPDFSFENNISPRK--HTSLTTFDDGNKDASPTESHFAPKNCNGAPCPYTQSNPASSY
        M T FT Q A      SQPETIDSAPTNS G+ DLPE K+ DSP FSF NN+SPRK  + S T FD GNK+AS TE   A +N N AP PYTQ NPASSY
Subjt:  MVTRFTLQNASSLATASQPETIDSAPTNSLGSKDLPENKQNDSPDFSFENNISPRK--HTSLTTFDDGNKDASPTESHFAPKNCNGAPCPYTQSNPASSY

Query:  SDVQESVYLNADISSNHELDRSWGTCNDAF------------SFWSSARTQSSTNGPSISCPSLFSSHGSSIASTSQSSSRNIFLSA----------TTD
        SD+Q SVYL+A  SSNH+LD SWGTCNDAF            SF S+AR QS  +G SISCPS +SS      S  QSSSR IFLSA          T D
Subjt:  SDVQESVYLNADISSNHELDRSWGTCNDAF------------SFWSSARTQSSTNGPSISCPSLFSSHGSSIASTSQSSSRNIFLSA----------TTD

Query:  NHPSTTNLAPSFAPSTTGLVTYEEQIKQDASPNKENDTYFNSITTPEISNNSMSSFGAAATPSSMND-RLGTPTVINATELGAQEVSAGKEFIANAERAP
         HPSTTN+  S APS  GL T+E++IKQDAS +  N+TYF+SI+TP  S+ +M SF   ATPS +N+ +L TPTV +A EL AQ VSAGKEF ANAE+  
Subjt:  NHPSTTNLAPSFAPSTTGLVTYEEQIKQDASPNKENDTYFNSITTPEISNNSMSSFGAAATPSSMND-RLGTPTVINATELGAQEVSAGKEFIANAERAP

Query:  MVSPSSMLNASSGMAGKSSDSSAISFGCSSSASELFNQGSIPSEFPINGLTSDPATSTIGTSYDATSSTRLGFESSTVASFSSICPTTSSATALVGSSLK
        ++  S M +ASS MAGK+S SS ISFGC S ASELF+ G  PSEFPI G T  PA+S +GTS  +TS T LGFES    SFSSIC TTS+A A+  SS K
Subjt:  MVSPSSMLNASSGMAGKSSDSSAISFGCSSSASELFNQGSIPSEFPINGLTSDPATSTIGTSYDATSSTRLGFESSTVASFSSICPTTSSATALVGSSLK

Query:  PVSSNSHPKVAIRVSSGNNQFEARGISKDNAPLFRQKPIPPLSSGLSFRPAASVLNPSQVGKRQNYS-----------SLEAKARGSFTLSVGDGDGDKA
         VSSNSHP VA RVS+GNN  E +G SK+N PLF QKPIPP SSG SF  A S  NP  V K+Q  +           S   +ARGSF LS   G GDKA
Subjt:  PVSSNSHPKVAIRVSSGNNQFEARGISKDNAPLFRQKPIPPLSSGLSFRPAASVLNPSQVGKRQNYS-----------SLEAKARGSFTLSVGDGDGDKA

Query:  RRRFVKFRRKK
         RR VK +RKK
Subjt:  RRRFVKFRRKK

XP_023528157.1 nuclear pore complex protein NUP1-like isoform X2 [Cucurbita pepo subsp. pepo]

0.0e+00

62.11

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Query:  MATARKQQIQEEEEEEEWLRTAGKFTDGRFLRKSPAKPYDRPPA---PTGKNSWILKLVDPAQRLISSGSQMLSSSAFR--------RLASRESSQSRKD
        M TAR+Q    +  EEE LRTAGKF D RF RK P KPYDRPP     +G NSWILKLVDPAQRLISSGSQML SS FR        R++S ESSQSR+D
Subjt:  MATARKQQIQEEEEEEEWLRTAGKFTDGRFLRKSPAKPYDRPPA---PTGKNSWILKLVDPAQRLISSGSQMLSSSAFR--------RLASRESSQSRKD

Query:  DKKEDGTVPFEFQVEETNVVENWDKSEQFGMMELERTMKQKTFTRSQIAHLTALLHSRTVDLPVEIEEKKFEFISSIPKSIRKEFDEVPNSEVTMDRQSI
        DKK D T      V   NV +N +++++F M+ELE+ MKQKTFTRS+I HLTAL+HS+ VDLP   EEK+ +FISSIP+S R EF ++PNSEV M RQS 
Subjt:  DKKEDGTVPFEFQVEETNVVENWDKSEQFGMMELERTMKQKTFTRSQIAHLTALLHSRTVDLPVEIEEKKFEFISSIPKSIRKEFDEVPNSEVTMDRQSI

Query:  STPILTSSVLDEDISSPAEIARAYMHSKLRKVCPSIQSSRATRLGENSAGSNSQSFSSKSTDLLLVPSTTTQGLKRRSSFSYSHIGSILPPRSIRQKRNI
         TPIL+SSVLDEDISSPA+IARAYM S+  K+CPS+ S RA  LGENSAG  S SFSSKS D+LLVPS+T+QGLKRRSSF ++HIG  +P R IRQK NI
Subjt:  STPILTSSVLDEDISSPAEIARAYMHSKLRKVCPSIQSSRATRLGENSAGSNSQSFSSKSTDLLLVPSTTTQGLKRRSSFSYSHIGSILPPRSIRQKRNI

Query:  HLSKGLSLPISSRPNSVPVDGLSFDASQSSKFAKVRHFQSPIRNLQLPLKPKISFPRKSIMNVESNSITGAGSSSIYTPS-YHVMASKILEQ---LTPSK
         LSKGLSLP+S+RP SVPVD LSFDASQSSKF KV +F S I N QL  KPK +  RK IMNVES++I GAGSSSIYTPS  + MASKILEQ   LTP K
Subjt:  HLSKGLSLPISSRPNSVPVDGLSFDASQSSKFAKVRHFQSPIRNLQLPLKPKISFPRKSIMNVESNSITGAGSSSIYTPS-YHVMASKILEQ---LTPSK

Query:  KKVSALSQLPVGEKAPLKLSPFTIGEHQRNVKDVDLP-SEEFVHEEKQSNGLHWIPYHDNQDDTFQNREKPENMKPLDPHHRCALLKNSGSIGCNNDSTN
        +KV    +LPVGE +P KLSPFT+  H + VKDVDLP  EE VH+ KQS  LH +PYHDNQ++T QN+EK ENMKP DPHHRCALLK+SGSIG + DS  
Subjt:  KKVSALSQLPVGEKAPLKLSPFTIGEHQRNVKDVDLP-SEEFVHEEKQSNGLHWIPYHDNQDDTFQNREKPENMKPLDPHHRCALLKNSGSIGCNNDSTN

Query:  NLEVPACAVVKSIIQPPVNKPAFQMVPDKDSLDHDESS-DHIVPATAEVIESDNCLALRQITANEALAPANSQTTSEVIVDSPLNRSSDSKTFDERIDED
        +L VPA AVVKSIIQPP NK AFQM PDKD +DHDESS D I PATAE  E D  LA+RQ TANEAL P+ SQT SEVIVDSPLNRSSD KT +  + +D
Subjt:  NLEVPACAVVKSIIQPPVNKPAFQMVPDKDSLDHDESS-DHIVPATAEVIESDNCLALRQITANEALAPANSQTTSEVIVDSPLNRSSDSKTFDERIDED

Query:  MVTRFTLQNASSLATASQPETIDSAPTNSLGSKDLPENKQNDSPDFSFENNISPRK--HTSLTTFDDGNKDASPTESHFAPKNCNGAPCPYTQSNPASSY
        M T FT Q A      SQPETIDSAPTNS G+ DLPE K+ DSP FSF NN+SPRK  + S T FD GNK+AS TE   A +N N AP PYTQ NPASSY
Subjt:  MVTRFTLQNASSLATASQPETIDSAPTNSLGSKDLPENKQNDSPDFSFENNISPRK--HTSLTTFDDGNKDASPTESHFAPKNCNGAPCPYTQSNPASSY

Query:  SDVQESVYLNADISSNHELDRSWGTCNDAF------------SFWSSARTQSSTNGPSISCPSLFSSHGSSIASTSQSSSRNIFLSA----------TTD
        SD+Q SVYL+A  SSNH+LD SWGTCNDAF            SF S+AR QS  +G SISCPS +SS      S  QSSSR IFLSA          T D
Subjt:  SDVQESVYLNADISSNHELDRSWGTCNDAF------------SFWSSARTQSSTNGPSISCPSLFSSHGSSIASTSQSSSRNIFLSA----------TTD

Query:  NHPSTTNLAPSFAPSTTGLVTYEEQIKQDASPNKENDTYFNSITTPEISNNSMSSFGAAATPSSMND-RLGTPTVINATELGAQEVSAGKEFIANAERAP
         HPSTTN+  S APS  GL T+E++IKQDAS +  N+TYF+SI+TP  S+ +M SF   ATPS +N+ +L TPTV +A EL AQ VSAGKEF ANAE+  
Subjt:  NHPSTTNLAPSFAPSTTGLVTYEEQIKQDASPNKENDTYFNSITTPEISNNSMSSFGAAATPSSMND-RLGTPTVINATELGAQEVSAGKEFIANAERAP

Query:  MVSPSSMLNASSGMAGKSSDSSAISFGCSSSASELFNQGSIPSEFPINGLTSDPATSTIGTSYDATSSTRLGFESSTVASFSSICPTTSSATALVGSSLK
        ++  S M +ASS MAGK+S SS ISFGC S ASELF+ G  PSEFPI G T  PA+S +GTS  +TS T LGFES    SFSSIC TTS+A A+  SS K
Subjt:  MVSPSSMLNASSGMAGKSSDSSAISFGCSSSASELFNQGSIPSEFPINGLTSDPATSTIGTSYDATSSTRLGFESSTVASFSSICPTTSSATALVGSSLK

Query:  PVSSNSHPKVAIRVSSGNNQFEARGISKDNAPLFRQKPIPPLSSGLSFRPAASVLNPSQVGKRQNYS-----------SLEAKARGSFTLSVGDGDGDKA
         VSSNSHP VA RVS+GNN  E +G SK+N PLF QKPIPP SSG SF  A S  NP  V K+Q  +           S   +ARGSF LS   G GDKA
Subjt:  PVSSNSHPKVAIRVSSGNNQFEARGISKDNAPLFRQKPIPPLSSGLSFRPAASVLNPSQVGKRQNYS-----------SLEAKARGSFTLSVGDGDGDKA

Query:  RRRFVKFRRKK
         RR VK +RKK
Subjt:  RRRFVKFRRKK

TrEMBL top hits

e value

%identity

Alignment

A0A6J1GWT8 nuclear pore complex protein NUP1-like isoform X1

0.0e+00

62.56

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Query:  MATARKQQIQEEEEEEEWLRTAGKFTDGRFLRKSPAKPYDRPPA---PTGKNSWILKLVDPAQRLISSGSQMLSSSAFR--------RLASRESSQSRKD
        MATAR    + +  EEE LRTAGKF D RF RK P KPYDRPP     +G NSWILKLVDPAQRLISSGSQML SS FR        R +S ESSQSR+D
Subjt:  MATARKQQIQEEEEEEEWLRTAGKFTDGRFLRKSPAKPYDRPPA---PTGKNSWILKLVDPAQRLISSGSQMLSSSAFR--------RLASRESSQSRKD

Query:  DKKEDGTVPFEFQVEETNVVENWDKSEQFGMMELERTMKQKTFTRSQIAHLTALLHSRTVDLPVEIEEKKFEFISSIPKSIRKEFDEVPNSEVTMDRQSI
        DKK D T PFE QV   NV +N +++++F M+ELE+ MKQKTFTRS+I HLTAL+HS+ VDLP   EEK+ +FISSIP+S R EF ++PNSEV M RQS 
Subjt:  DKKEDGTVPFEFQVEETNVVENWDKSEQFGMMELERTMKQKTFTRSQIAHLTALLHSRTVDLPVEIEEKKFEFISSIPKSIRKEFDEVPNSEVTMDRQSI

Query:  STPILTSSVLDEDISSPAEIARAYMHSKLRKVCPSIQSSRATRLGENSAGSNSQSFSSKSTDLLLVPSTTTQGLKRRSSFSYSHIGSILPPRSIRQKRNI
         TPIL+SSVLDEDISSPAEIARAYM S+  K+CPS+ S RA  LGENSA   S SFSSKSTD+LLVPS+T QGLKRRSSF  +HIG  +P R I QK NI
Subjt:  STPILTSSVLDEDISSPAEIARAYMHSKLRKVCPSIQSSRATRLGENSAGSNSQSFSSKSTDLLLVPSTTTQGLKRRSSFSYSHIGSILPPRSIRQKRNI

Query:  HLSKGLSLPISSRPNSVPVDGLSFDASQSSKFAKVRHFQSPIRNLQLPLKPKISFPRKSIMNVESNSITGAGSSSIYTPS-YHVMASKILEQ---LTPSK
        HLSKG SLP+S+RP SVPVD LSFDASQSSKF KV +F S I N QL LKPK +  RK IMNVES++I GAGSSSIYTPS  + MASKILEQ   LTP K
Subjt:  HLSKGLSLPISSRPNSVPVDGLSFDASQSSKFAKVRHFQSPIRNLQLPLKPKISFPRKSIMNVESNSITGAGSSSIYTPS-YHVMASKILEQ---LTPSK

Query:  KKVSALSQLPVGEKAPLKLSPFTIGEHQRNVKDVDLP-SEEFVHEEKQSNGLHWIPYHDNQDDTFQNREKPENMKPLDPHHRCALLKNSGSIGCNNDSTN
        +KV    +LPVGE +P KLSPFT+  H + VKDVDLP  EE VH+ KQS  LH +PYHDNQ++T QN+EK ENMKP DPHHRCALLK+SGSIG + DS  
Subjt:  KKVSALSQLPVGEKAPLKLSPFTIGEHQRNVKDVDLP-SEEFVHEEKQSNGLHWIPYHDNQDDTFQNREKPENMKPLDPHHRCALLKNSGSIGCNNDSTN

Query:  NLEVPACAVVKSIIQPPVNKPAFQMVPDKDSLDHDESS-DHIVPATAEVIESDNCLALRQITANEALAPANSQTTSEVIVDSPLNRSSDSKTFDERIDED
        +L VPA AVVKSIIQPP NK AFQM PDKD +D DESS D + PATAE  E D  LA+RQ TANE LAP+  QT SEVIV SPLNRSSD KT +  + +D
Subjt:  NLEVPACAVVKSIIQPPVNKPAFQMVPDKDSLDHDESS-DHIVPATAEVIESDNCLALRQITANEALAPANSQTTSEVIVDSPLNRSSDSKTFDERIDED

Query:  MVTRFTLQNASSLATASQPETIDSAPTNSLGSKDLPENKQNDSPDFSFENNISPRK--HTSLTTFDDGNKDASPTESHFAPKNCNGAPCPYTQSNPASSY
        M T FT Q A      SQPETIDSAPTNS G+ DLPE K+ DSP FSF NN+SPRK  + S T FD GNKDAS TE   AP+N NGAP PYTQ NPASSY
Subjt:  MVTRFTLQNASSLATASQPETIDSAPTNSLGSKDLPENKQNDSPDFSFENNISPRK--HTSLTTFDDGNKDASPTESHFAPKNCNGAPCPYTQSNPASSY

Query:  SDVQESVYLNADISSNHELDRSWGTCNDAF------------SFWSSARTQSSTNGPSISCPSLFSSHGSSIASTSQSSSRNIFLSA----------TTD
        SDVQ SVYLNA  SSNH+LD SWGTCNDAF            SF S+AR QS  NG SISCPS +SS      S  QSSSR IFLSA          T  
Subjt:  SDVQESVYLNADISSNHELDRSWGTCNDAF------------SFWSSARTQSSTNGPSISCPSLFSSHGSSIASTSQSSSRNIFLSA----------TTD

Query:  NHPSTTNLAPSFAPSTTGLVTYEEQIKQDASPNKENDTYFNSITTPEISNNSMSSFGAAATPSSMND-RLGTPTVINATELGAQEVSAGKEFIANAERAP
         HPSTTN+  S APS  GL T+E++IKQDAS +  N+TYF+SI+TP  S+ +M SF   ATPS +N+ +L TPTV +A EL AQ  SAGKEF ANAE+  
Subjt:  NHPSTTNLAPSFAPSTTGLVTYEEQIKQDASPNKENDTYFNSITTPEISNNSMSSFGAAATPSSMND-RLGTPTVINATELGAQEVSAGKEFIANAERAP

Query:  MVSPSSMLNASSGMAGKSSDSSAISFGCSSSASELFNQGSIPSEFPINGLTSDPATSTIGTSYDATSSTRLGFESSTVASFSSICPTTSSATALVGSSLK
        ++  S M +ASS MAGK+S SS ISFGCSS ASELF+ GS PSEFPI G T  PATST    + +T  T LGFES T ASFSSIC TTS+A A+  SS K
Subjt:  MVSPSSMLNASSGMAGKSSDSSAISFGCSSSASELFNQGSIPSEFPINGLTSDPATSTIGTSYDATSSTRLGFESSTVASFSSICPTTSSATALVGSSLK

Query:  PVSSNSHPKVAIRVSSGNNQFEARGISKDNAPLFRQKPIPPLSSGLSFRPAASVLNPSQVGKRQNYS-----------SLEAKARGSFTLSVGDGDGDKA
         VSSNSHP VA RVS+GNN  E +G SKDN P+F QKP+PP SSG SF  A S  NP  V K+Q  +           S   +ARGSF LS   G G+KA
Subjt:  PVSSNSHPKVAIRVSSGNNQFEARGISKDNAPLFRQKPIPPLSSGLSFRPAASVLNPSQVGKRQNYS-----------SLEAKARGSFTLSVGDGDGDKA

Query:  RRRFVKFRRKK
         RR VK +RKK
Subjt:  RRRFVKFRRKK

A0A6J1GZB0 nuclear pore complex protein NUP1-like isoform X2

0.0e+00

62.2

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Query:  MATARKQQIQEEEEEEEWLRTAGKFTDGRFLRKSPAKPYDRPPA---PTGKNSWILKLVDPAQRLISSGSQMLSSSAFR--------RLASRESSQSRKD
        MATAR    + +  EEE LRTAGKF D RF RK P KPYDRPP     +G NSWILKLVDPAQRLISSGSQML SS FR        R +S ESSQSR+D
Subjt:  MATARKQQIQEEEEEEEWLRTAGKFTDGRFLRKSPAKPYDRPPA---PTGKNSWILKLVDPAQRLISSGSQMLSSSAFR--------RLASRESSQSRKD

Query:  DKKEDGTVPFEFQVEETNVVENWDKSEQFGMMELERTMKQKTFTRSQIAHLTALLHSRTVDLPVEIEEKKFEFISSIPKSIRKEFDEVPNSEVTMDRQSI
        DKK D T      V   NV +N +++++F M+ELE+ MKQKTFTRS+I HLTAL+HS+ VDLP   EEK+ +FISSIP+S R EF ++PNSEV M RQS 
Subjt:  DKKEDGTVPFEFQVEETNVVENWDKSEQFGMMELERTMKQKTFTRSQIAHLTALLHSRTVDLPVEIEEKKFEFISSIPKSIRKEFDEVPNSEVTMDRQSI

Query:  STPILTSSVLDEDISSPAEIARAYMHSKLRKVCPSIQSSRATRLGENSAGSNSQSFSSKSTDLLLVPSTTTQGLKRRSSFSYSHIGSILPPRSIRQKRNI
         TPIL+SSVLDEDISSPAEIARAYM S+  K+CPS+ S RA  LGENSA   S SFSSKSTD+LLVPS+T QGLKRRSSF  +HIG  +P R I QK NI
Subjt:  STPILTSSVLDEDISSPAEIARAYMHSKLRKVCPSIQSSRATRLGENSAGSNSQSFSSKSTDLLLVPSTTTQGLKRRSSFSYSHIGSILPPRSIRQKRNI

Query:  HLSKGLSLPISSRPNSVPVDGLSFDASQSSKFAKVRHFQSPIRNLQLPLKPKISFPRKSIMNVESNSITGAGSSSIYTPS-YHVMASKILEQ---LTPSK
        HLSKG SLP+S+RP SVPVD LSFDASQSSKF KV +F S I N QL LKPK +  RK IMNVES++I GAGSSSIYTPS  + MASKILEQ   LTP K
Subjt:  HLSKGLSLPISSRPNSVPVDGLSFDASQSSKFAKVRHFQSPIRNLQLPLKPKISFPRKSIMNVESNSITGAGSSSIYTPS-YHVMASKILEQ---LTPSK

Query:  KKVSALSQLPVGEKAPLKLSPFTIGEHQRNVKDVDLP-SEEFVHEEKQSNGLHWIPYHDNQDDTFQNREKPENMKPLDPHHRCALLKNSGSIGCNNDSTN
        +KV    +LPVGE +P KLSPFT+  H + VKDVDLP  EE VH+ KQS  LH +PYHDNQ++T QN+EK ENMKP DPHHRCALLK+SGSIG + DS  
Subjt:  KKVSALSQLPVGEKAPLKLSPFTIGEHQRNVKDVDLP-SEEFVHEEKQSNGLHWIPYHDNQDDTFQNREKPENMKPLDPHHRCALLKNSGSIGCNNDSTN

Query:  NLEVPACAVVKSIIQPPVNKPAFQMVPDKDSLDHDESS-DHIVPATAEVIESDNCLALRQITANEALAPANSQTTSEVIVDSPLNRSSDSKTFDERIDED
        +L VPA AVVKSIIQPP NK AFQM PDKD +D DESS D + PATAE  E D  LA+RQ TANE LAP+  QT SEVIV SPLNRSSD KT +  + +D
Subjt:  NLEVPACAVVKSIIQPPVNKPAFQMVPDKDSLDHDESS-DHIVPATAEVIESDNCLALRQITANEALAPANSQTTSEVIVDSPLNRSSDSKTFDERIDED

Query:  MVTRFTLQNASSLATASQPETIDSAPTNSLGSKDLPENKQNDSPDFSFENNISPRK--HTSLTTFDDGNKDASPTESHFAPKNCNGAPCPYTQSNPASSY
        M T FT Q A      SQPETIDSAPTNS G+ DLPE K+ DSP FSF NN+SPRK  + S T FD GNKDAS TE   AP+N NGAP PYTQ NPASSY
Subjt:  MVTRFTLQNASSLATASQPETIDSAPTNSLGSKDLPENKQNDSPDFSFENNISPRK--HTSLTTFDDGNKDASPTESHFAPKNCNGAPCPYTQSNPASSY

Query:  SDVQESVYLNADISSNHELDRSWGTCNDAF------------SFWSSARTQSSTNGPSISCPSLFSSHGSSIASTSQSSSRNIFLSA----------TTD
        SDVQ SVYLNA  SSNH+LD SWGTCNDAF            SF S+AR QS  NG SISCPS +SS      S  QSSSR IFLSA          T  
Subjt:  SDVQESVYLNADISSNHELDRSWGTCNDAF------------SFWSSARTQSSTNGPSISCPSLFSSHGSSIASTSQSSSRNIFLSA----------TTD

Query:  NHPSTTNLAPSFAPSTTGLVTYEEQIKQDASPNKENDTYFNSITTPEISNNSMSSFGAAATPSSMND-RLGTPTVINATELGAQEVSAGKEFIANAERAP
         HPSTTN+  S APS  GL T+E++IKQDAS +  N+TYF+SI+TP  S+ +M SF   ATPS +N+ +L TPTV +A EL AQ  SAGKEF ANAE+  
Subjt:  NHPSTTNLAPSFAPSTTGLVTYEEQIKQDASPNKENDTYFNSITTPEISNNSMSSFGAAATPSSMND-RLGTPTVINATELGAQEVSAGKEFIANAERAP

Query:  MVSPSSMLNASSGMAGKSSDSSAISFGCSSSASELFNQGSIPSEFPINGLTSDPATSTIGTSYDATSSTRLGFESSTVASFSSICPTTSSATALVGSSLK
        ++  S M +ASS MAGK+S SS ISFGCSS ASELF+ GS PSEFPI G T  PATST    + +T  T LGFES T ASFSSIC TTS+A A+  SS K
Subjt:  MVSPSSMLNASSGMAGKSSDSSAISFGCSSSASELFNQGSIPSEFPINGLTSDPATSTIGTSYDATSSTRLGFESSTVASFSSICPTTSSATALVGSSLK

Query:  PVSSNSHPKVAIRVSSGNNQFEARGISKDNAPLFRQKPIPPLSSGLSFRPAASVLNPSQVGKRQNYS-----------SLEAKARGSFTLSVGDGDGDKA
         VSSNSHP VA RVS+GNN  E +G SKDN P+F QKP+PP SSG SF  A S  NP  V K+Q  +           S   +ARGSF LS   G G+KA
Subjt:  PVSSNSHPKVAIRVSSGNNQFEARGISKDNAPLFRQKPIPPLSSGLSFRPAASVLNPSQVGKRQNYS-----------SLEAKARGSFTLSVGDGDGDKA

Query:  RRRFVKFRRKK
         RR VK +RKK
Subjt:  RRRFVKFRRKK

A0A6J1K2T4 nuclear pore complex protein NUP1-like isoform X1

0.0e+00

61.84

Show/hide

Query:  MATARKQQIQEEEEEEEWLRTAGKFTDGRFLRKSPAKPYDRPPA---PTGKNSWILKLVDPAQRLISSGSQMLSSSAFRR--------LASRESSQSRKD
        MATAR+Q    +  EEE LRTAGKF D +F RK P KPYDRPP     +G NSWILKLVDPAQRLISSGSQML SS FR         ++S ES QSR+D
Subjt:  MATARKQQIQEEEEEEEWLRTAGKFTDGRFLRKSPAKPYDRPPA---PTGKNSWILKLVDPAQRLISSGSQMLSSSAFRR--------LASRESSQSRKD

Query:  DKKEDGTVPFEFQVEETNVVENWDKSEQFGMMELERTMKQKTFTRSQIAHLTALLHSRTVDLPVEIEEKKFEFISSIPKSIRKEFDEVPNSEVTMDRQSI
        DKK D T PFE QV   NV +N +++++F M+ELE+ MKQKTFTRS+I HLTAL+HS+ VDLP   EEK+ +FISSIP+S R EF ++ NSEV M RQS 
Subjt:  DKKEDGTVPFEFQVEETNVVENWDKSEQFGMMELERTMKQKTFTRSQIAHLTALLHSRTVDLPVEIEEKKFEFISSIPKSIRKEFDEVPNSEVTMDRQSI

Query:  STPILTSSVLDEDISSPAEIARAYMHSKLRKVCPSIQSSRATRLGENSAGSNSQSFSSKSTDLLLVPSTTTQGLKRRSSFSYSHIGSILPPRSIRQKRNI
         TP L+SSVLDEDISSPAEIARAYM S+  K+CPS+ S RA  LGENSAG  S SFSSKS D+LLVPS+T+QGLKRRSSF  +HIG  +P R IRQK NI
Subjt:  STPILTSSVLDEDISSPAEIARAYMHSKLRKVCPSIQSSRATRLGENSAGSNSQSFSSKSTDLLLVPSTTTQGLKRRSSFSYSHIGSILPPRSIRQKRNI

Query:  HLSKGLSLPISSRPNSVPVDGLSFDASQSSKFAKVRHFQSPIRNLQLPLKPKISFPRKSIMNVESNSITGAGSSSIYTPS-YHVMASKILEQ---LTPSK
        HLSKGLSLP+S+RP S PVD LSFDASQSSKF KV +F S I N QL LKPK +  RK IMNVES+ I GAGSSSIYTPS  + MASKILEQ   LTP K
Subjt:  HLSKGLSLPISSRPNSVPVDGLSFDASQSSKFAKVRHFQSPIRNLQLPLKPKISFPRKSIMNVESNSITGAGSSSIYTPS-YHVMASKILEQ---LTPSK

Query:  KKVSALSQLPVGEKAPLKLSPFTIGEHQRNVKDVDLP-SEEFVHEEKQSNGLHWIPYHDNQDDTFQNREKPENMKPLDPHHRCALLKNSGSIGCNNDSTN
        +KV    +LPVGE +P KLSPFT+  H + VKDVDLP  EE VH+ KQS  LH +PYHDNQ++T QN+EK ENMKP DPHHRCALLK+SGSIG + DS  
Subjt:  KKVSALSQLPVGEKAPLKLSPFTIGEHQRNVKDVDLP-SEEFVHEEKQSNGLHWIPYHDNQDDTFQNREKPENMKPLDPHHRCALLKNSGSIGCNNDSTN

Query:  NLEVPACAVVKSIIQPPVNKPAFQMVPDKDSLDHDESS-DHIVPATAEVIESDNCLALRQITANEALAPANSQTTSEVIVDSPLNRSSDSKTFDERIDED
        +L VPA AVVKS IQPP NK AF M PDKD +DHDESS D + PATAE  E D  LA+RQ TA+E+LAP+  QT SEVIV SPLNRSSD KT +  + +D
Subjt:  NLEVPACAVVKSIIQPPVNKPAFQMVPDKDSLDHDESS-DHIVPATAEVIESDNCLALRQITANEALAPANSQTTSEVIVDSPLNRSSDSKTFDERIDED

Query:  MVTRFTLQNASSLATASQPETIDSAPTNSLGSKDLPENKQNDSPDFSFENNISPRK--HTSLTTFDDGNKDASPTESHFAPKNCNGAPCPYTQSNPASSY
        M T FT Q A      SQPETIDSAPTNS G+ DLPENK+ DSP FSF NN+SPRK  + S T FD GNKDAS TE   A +N NGA  PYTQ NPASS 
Subjt:  MVTRFTLQNASSLATASQPETIDSAPTNSLGSKDLPENKQNDSPDFSFENNISPRK--HTSLTTFDDGNKDASPTESHFAPKNCNGAPCPYTQSNPASSY

Query:  SDVQESVYLNADISSNHELDRSWGTCNDAF------------SFWSSARTQSSTNGPSISCPSLFSSHGSSIASTSQSSSRNIFLSA----------TTD
        SDVQ SVYLNA  SSNH+LD SWGTCNDAF            SF  +AR QS  NG SISCPS +SS      S  QSSSR IFLSA          T D
Subjt:  SDVQESVYLNADISSNHELDRSWGTCNDAF------------SFWSSARTQSSTNGPSISCPSLFSSHGSSIASTSQSSSRNIFLSA----------TTD

Query:  NHPSTTNLAPSFAPSTTGLVTYEEQIKQDASPNKENDTYFNSITTPEISNNSMSSFGAAATPSSMND-RLGTPTVINATELGAQEVSAGKEFIANAERAP
         HPSTTN+  S APS  GL T+E++IKQDAS +  N+TYF+SI+TP  S+ +M SF   ATPS +N+ +L TPTV +A EL AQ VSAGKEF ANAE+  
Subjt:  NHPSTTNLAPSFAPSTTGLVTYEEQIKQDASPNKENDTYFNSITTPEISNNSMSSFGAAATPSSMND-RLGTPTVINATELGAQEVSAGKEFIANAERAP

Query:  MVSPSSMLNASSGMAGKSSDSSAISFGCSSSASELFNQGSIPSEFPINGLTSDPATSTIGTSYDATSSTRLGFESSTVASFSSICPTTSSATALVGSSLK
        ++  S M +ASS MAGK+S SS ISFGCSS ASELF+ GS PSEFPI G T   ATST    + +T  T LGFES T ASFSSIC TTS+A A+ GSS K
Subjt:  MVSPSSMLNASSGMAGKSSDSSAISFGCSSSASELFNQGSIPSEFPINGLTSDPATSTIGTSYDATSSTRLGFESSTVASFSSICPTTSSATALVGSSLK

Query:  PVSSNSHPKVAIRVSSGNNQFEARGISKDNAPLFRQKPIPPLSSGLSFRPAASVLNPSQVGKRQNYS-----------SLEAKARGSFTLSVGDGDGDKA
         VSSNSH  VA RVS+GN   E +G  KDN PLF QKP+PP SSG SF  A    NP  VGK+Q  +           S   +ARGSF LS   G G+KA
Subjt:  PVSSNSHPKVAIRVSSGNNQFEARGISKDNAPLFRQKPIPPLSSGLSFRPAASVLNPSQVGKRQNYS-----------SLEAKARGSFTLSVGDGDGDKA

Query:  RRRFVKFRRKK
         RR VK +RKK
Subjt:  RRRFVKFRRKK

A0A6J1KBI9 nuclear pore complex protein NUP1-like isoform X2

4.0e-310

61.48

Show/hide

Query:  MATARKQQIQEEEEEEEWLRTAGKFTDGRFLRKSPAKPYDRPPA---PTGKNSWILKLVDPAQRLISSGSQMLSSSAFRR--------LASRESSQSRKD
        MATAR+Q    +  EEE LRTAGKF D +F RK P KPYDRPP     +G NSWILKLVDPAQRLISSGSQML SS FR         ++S ES QSR+D
Subjt:  MATARKQQIQEEEEEEEWLRTAGKFTDGRFLRKSPAKPYDRPPA---PTGKNSWILKLVDPAQRLISSGSQMLSSSAFRR--------LASRESSQSRKD

Query:  DKKEDGTVPFEFQVEETNVVENWDKSEQFGMMELERTMKQKTFTRSQIAHLTALLHSRTVDLPVEIEEKKFEFISSIPKSIRKEFDEVPNSEVTMDRQSI
        DKK D T      V   NV +N +++++F M+ELE+ MKQKTFTRS+I HLTAL+HS+ VDLP   EEK+ +FISSIP+S R EF ++ NSEV M RQS 
Subjt:  DKKEDGTVPFEFQVEETNVVENWDKSEQFGMMELERTMKQKTFTRSQIAHLTALLHSRTVDLPVEIEEKKFEFISSIPKSIRKEFDEVPNSEVTMDRQSI

Query:  STPILTSSVLDEDISSPAEIARAYMHSKLRKVCPSIQSSRATRLGENSAGSNSQSFSSKSTDLLLVPSTTTQGLKRRSSFSYSHIGSILPPRSIRQKRNI
         TP L+SSVLDEDISSPAEIARAYM S+  K+CPS+ S RA  LGENSAG  S SFSSKS D+LLVPS+T+QGLKRRSSF  +HIG  +P R IRQK NI
Subjt:  STPILTSSVLDEDISSPAEIARAYMHSKLRKVCPSIQSSRATRLGENSAGSNSQSFSSKSTDLLLVPSTTTQGLKRRSSFSYSHIGSILPPRSIRQKRNI

Query:  HLSKGLSLPISSRPNSVPVDGLSFDASQSSKFAKVRHFQSPIRNLQLPLKPKISFPRKSIMNVESNSITGAGSSSIYTPS-YHVMASKILEQ---LTPSK
        HLSKGLSLP+S+RP S PVD LSFDASQSSKF KV +F S I N QL LKPK +  RK IMNVES+ I GAGSSSIYTPS  + MASKILEQ   LTP K
Subjt:  HLSKGLSLPISSRPNSVPVDGLSFDASQSSKFAKVRHFQSPIRNLQLPLKPKISFPRKSIMNVESNSITGAGSSSIYTPS-YHVMASKILEQ---LTPSK

Query:  KKVSALSQLPVGEKAPLKLSPFTIGEHQRNVKDVDLP-SEEFVHEEKQSNGLHWIPYHDNQDDTFQNREKPENMKPLDPHHRCALLKNSGSIGCNNDSTN
        +KV    +LPVGE +P KLSPFT+  H + VKDVDLP  EE VH+ KQS  LH +PYHDNQ++T QN+EK ENMKP DPHHRCALLK+SGSIG + DS  
Subjt:  KKVSALSQLPVGEKAPLKLSPFTIGEHQRNVKDVDLP-SEEFVHEEKQSNGLHWIPYHDNQDDTFQNREKPENMKPLDPHHRCALLKNSGSIGCNNDSTN

Query:  NLEVPACAVVKSIIQPPVNKPAFQMVPDKDSLDHDESS-DHIVPATAEVIESDNCLALRQITANEALAPANSQTTSEVIVDSPLNRSSDSKTFDERIDED
        +L VPA AVVKS IQPP NK AF M PDKD +DHDESS D + PATAE  E D  LA+RQ TA+E+LAP+  QT SEVIV SPLNRSSD KT +  + +D
Subjt:  NLEVPACAVVKSIIQPPVNKPAFQMVPDKDSLDHDESS-DHIVPATAEVIESDNCLALRQITANEALAPANSQTTSEVIVDSPLNRSSDSKTFDERIDED

Query:  MVTRFTLQNASSLATASQPETIDSAPTNSLGSKDLPENKQNDSPDFSFENNISPRK--HTSLTTFDDGNKDASPTESHFAPKNCNGAPCPYTQSNPASSY
        M T FT Q A      SQPETIDSAPTNS G+ DLPENK+ DSP FSF NN+SPRK  + S T FD GNKDAS TE   A +N NGA  PYTQ NPASS 
Subjt:  MVTRFTLQNASSLATASQPETIDSAPTNSLGSKDLPENKQNDSPDFSFENNISPRK--HTSLTTFDDGNKDASPTESHFAPKNCNGAPCPYTQSNPASSY

Query:  SDVQESVYLNADISSNHELDRSWGTCNDAF------------SFWSSARTQSSTNGPSISCPSLFSSHGSSIASTSQSSSRNIFLSA----------TTD
        SDVQ SVYLNA  SSNH+LD SWGTCNDAF            SF  +AR QS  NG SISCPS +SS      S  QSSSR IFLSA          T D
Subjt:  SDVQESVYLNADISSNHELDRSWGTCNDAF------------SFWSSARTQSSTNGPSISCPSLFSSHGSSIASTSQSSSRNIFLSA----------TTD

Query:  NHPSTTNLAPSFAPSTTGLVTYEEQIKQDASPNKENDTYFNSITTPEISNNSMSSFGAAATPSSMND-RLGTPTVINATELGAQEVSAGKEFIANAERAP
         HPSTTN+  S APS  GL T+E++IKQDAS +  N+TYF+SI+TP  S+ +M SF   ATPS +N+ +L TPTV +A EL AQ VSAGKEF ANAE+  
Subjt:  NHPSTTNLAPSFAPSTTGLVTYEEQIKQDASPNKENDTYFNSITTPEISNNSMSSFGAAATPSSMND-RLGTPTVINATELGAQEVSAGKEFIANAERAP

Query:  MVSPSSMLNASSGMAGKSSDSSAISFGCSSSASELFNQGSIPSEFPINGLTSDPATSTIGTSYDATSSTRLGFESSTVASFSSICPTTSSATALVGSSLK
        ++  S M +ASS MAGK+S SS ISFGCSS ASELF+ GS PSEFPI G T   ATST    + +T  T LGFES T ASFSSIC TTS+A A+ GSS K
Subjt:  MVSPSSMLNASSGMAGKSSDSSAISFGCSSSASELFNQGSIPSEFPINGLTSDPATSTIGTSYDATSSTRLGFESSTVASFSSICPTTSSATALVGSSLK

Query:  PVSSNSHPKVAIRVSSGNNQFEARGISKDNAPLFRQKPIPPLSSGLSFRPAASVLNPSQVGKRQNYS-----------SLEAKARGSFTLSVGDGDGDKA
         VSSNSH  VA RVS+GN   E +G  KDN PLF QKP+PP SSG SF  A    NP  VGK+Q  +           S   +ARGSF LS   G G+KA
Subjt:  PVSSNSHPKVAIRVSSGNNQFEARGISKDNAPLFRQKPIPPLSSGLSFRPAASVLNPSQVGKRQNYS-----------SLEAKARGSFTLSVGDGDGDKA

Query:  RRRFVKFRRKK
         RR VK +RKK
Subjt:  RRRFVKFRRKK

A0A6J1KDW6 nuclear pore complex protein NUP1-like isoform X3

1.5e-278

62.28

Show/hide

Query:  MMELERTMKQKTFTRSQIAHLTALLHSRTVDLPVEIEEKKFEFISSIPKSIRKEFDEVPNSEVTMDRQSISTPILTSSVLDEDISSPAEIARAYMHSKLR
        M+ELE+ MKQKTFTRS+I HLTAL+HS+ VDLP   EEK+ +FISSIP+S R EF ++ NSEV M RQS  TP L+SSVLDEDISSPAEIARAYM S+  
Subjt:  MMELERTMKQKTFTRSQIAHLTALLHSRTVDLPVEIEEKKFEFISSIPKSIRKEFDEVPNSEVTMDRQSISTPILTSSVLDEDISSPAEIARAYMHSKLR

Query:  KVCPSIQSSRATRLGENSAGSNSQSFSSKSTDLLLVPSTTTQGLKRRSSFSYSHIGSILPPRSIRQKRNIHLSKGLSLPISSRPNSVPVDGLSFDASQSS
        K+CPS+ S RA  LGENSAG  S SFSSKS D+LLVPS+T+QGLKRRSSF  +HIG  +P R IRQK NIHLSKGLSLP+S+RP S PVD LSFDASQSS
Subjt:  KVCPSIQSSRATRLGENSAGSNSQSFSSKSTDLLLVPSTTTQGLKRRSSFSYSHIGSILPPRSIRQKRNIHLSKGLSLPISSRPNSVPVDGLSFDASQSS

Query:  KFAKVRHFQSPIRNLQLPLKPKISFPRKSIMNVESNSITGAGSSSIYTPS-YHVMASKILEQ---LTPSKKKVSALSQLPVGEKAPLKLSPFTIGEHQRN
        KF KV +F S I N QL LKPK +  RK IMNVES+ I GAGSSSIYTPS  + MASKILEQ   LTP K+KV    +LPVGE +P KLSPFT+  H + 
Subjt:  KFAKVRHFQSPIRNLQLPLKPKISFPRKSIMNVESNSITGAGSSSIYTPS-YHVMASKILEQ---LTPSKKKVSALSQLPVGEKAPLKLSPFTIGEHQRN

Query:  VKDVDLP-SEEFVHEEKQSNGLHWIPYHDNQDDTFQNREKPENMKPLDPHHRCALLKNSGSIGCNNDSTNNLEVPACAVVKSIIQPPVNKPAFQMVPDKD
        VKDVDLP  EE VH+ KQS  LH +PYHDNQ++T QN+EK ENMKP DPHHRCALLK+SGSIG + DS  +L VPA AVVKS IQPP NK AF M PDKD
Subjt:  VKDVDLP-SEEFVHEEKQSNGLHWIPYHDNQDDTFQNREKPENMKPLDPHHRCALLKNSGSIGCNNDSTNNLEVPACAVVKSIIQPPVNKPAFQMVPDKD

Query:  SLDHDESS-DHIVPATAEVIESDNCLALRQITANEALAPANSQTTSEVIVDSPLNRSSDSKTFDERIDEDMVTRFTLQNASSLATASQPETIDSAPTNSL
         +DHDESS D + PATAE  E D  LA+RQ TA+E+LAP+  QT SEVIV SPLNRSSD KT +  + +DM T FT Q A      SQPETIDSAPTNS 
Subjt:  SLDHDESS-DHIVPATAEVIESDNCLALRQITANEALAPANSQTTSEVIVDSPLNRSSDSKTFDERIDEDMVTRFTLQNASSLATASQPETIDSAPTNSL

Query:  GSKDLPENKQNDSPDFSFENNISPRK--HTSLTTFDDGNKDASPTESHFAPKNCNGAPCPYTQSNPASSYSDVQESVYLNADISSNHELDRSWGTCNDAF
        G+ DLPENK+ DSP FSF NN+SPRK  + S T FD GNKDAS TE   A +N NGA  PYTQ NPASS SDVQ SVYLNA  SSNH+LD SWGTCNDAF
Subjt:  GSKDLPENKQNDSPDFSFENNISPRK--HTSLTTFDDGNKDASPTESHFAPKNCNGAPCPYTQSNPASSYSDVQESVYLNADISSNHELDRSWGTCNDAF

Query:  ------------SFWSSARTQSSTNGPSISCPSLFSSHGSSIASTSQSSSRNIFLSA----------TTDNHPSTTNLAPSFAPSTTGLVTYEEQIKQDA
                    SF  +AR QS  NG SISCPS +SS      S  QSSSR IFLSA          T D HPSTTN+  S APS  GL T+E++IKQDA
Subjt:  ------------SFWSSARTQSSTNGPSISCPSLFSSHGSSIASTSQSSSRNIFLSA----------TTDNHPSTTNLAPSFAPSTTGLVTYEEQIKQDA

Query:  SPNKENDTYFNSITTPEISNNSMSSFGAAATPSSMND-RLGTPTVINATELGAQEVSAGKEFIANAERAPMVSPSSMLNASSGMAGKSSDSSAISFGCSS
        S +  N+TYF+SI+TP  S+ +M SF   ATPS +N+ +L TPTV +A EL AQ VSAGKEF ANAE+  ++  S M +ASS MAGK+S SS ISFGCSS
Subjt:  SPNKENDTYFNSITTPEISNNSMSSFGAAATPSSMND-RLGTPTVINATELGAQEVSAGKEFIANAERAPMVSPSSMLNASSGMAGKSSDSSAISFGCSS

Query:  SASELFNQGSIPSEFPINGLTSDPATSTIGTSYDATSSTRLGFESSTVASFSSICPTTSSATALVGSSLKPVSSNSHPKVAIRVSSGNNQFEARGISKDN
         ASELF+ GS PSEFPI G T   ATST    + +T  T LGFES T ASFSSIC TTS+A A+ GSS K VSSNSH  VA RVS+GN   E +G  KDN
Subjt:  SASELFNQGSIPSEFPINGLTSDPATSTIGTSYDATSSTRLGFESSTVASFSSICPTTSSATALVGSSLKPVSSNSHPKVAIRVSSGNNQFEARGISKDN

Query:  APLFRQKPIPPLSSGLSFRPAASVLNPSQVGKRQNYS-----------SLEAKARGSFTLSVGDGDGDKARRRFVKFRRKK
         PLF QKP+PP SSG SF  A    NP  VGK+Q  +           S   +ARGSF LS   G G+KA RR VK +RKK
Subjt:  APLFRQKPIPPLSSGLSFRPAASVLNPSQVGKRQNYS-----------SLEAKARGSFTLSVGDGDGDKARRRFVKFRRKK

SwissProt top hits

e value

%identity

Alignment

Q9CAF4 Nuclear pore complex protein NUP1

2.7e-11

23.81

Show/hide

Query:  LRTAGKFTDGRFLRKSPAKPYDRPPAPTGK----------NSWILKLVDPAQRLISSGSQMLSSSAFR-RLASRESSQSRKDDKKEDGTVPFEFQVEETN
        L T GKF      R+S   PYDRP                  W+ KLVDPAQRLI+  +Q L  S  R RL S E+     + +K+   +P     +ET 
Subjt:  LRTAGKFTDGRFLRKSPAKPYDRPPAPTGK----------NSWILKLVDPAQRLISSGSQMLSSSAFR-RLASRESSQSRKDDKKEDGTVPFEFQVEETN

Query:  VVENWDKSE--------------------QFGMMELERTMKQKTFTRSQIAHLTALLHSRTVDLPVEIEEKKFEFISSIPKSIRKEFDEVPNSEVTMDRQ
        V    D S                     + G  +LE+ ++ KTFTRS++  LT LL S+  D     EE++ E    +      E D       +M+  
Subjt:  VVENWDKSE--------------------QFGMMELERTMKQKTFTRSQIAHLTALLHSRTVDLPVEIEEKKFEFISSIPKSIRKEFDEVPNSEVTMDRQ

Query:  SISTPILTSSVLDEDISSPAEIARAYMHSKLRKVCPSIQSSRATRLGENSAGSNSQSFSSKSTDLLLV--------------------------------
         +STP  +   LDE I+SPA++A+AYM S+  +V PS+   R     E+S   N   F  KS  + LV                                
Subjt:  SISTPILTSSVLDEDISSPAEIARAYMHSKLRKVCPSIQSSRATRLGENSAGSNSQSFSSKSTDLLLV--------------------------------

Query:  ------------------------PSTTTQ----GLKRRSSFSYSHIGSILPPRSIRQKRNIHLSKGLSLPISSRPNSVPVDGLSFDASQSSKFAKVRHF
                                PS + Q    GLKRRSS   + IGS+ P R IRQK N+  S+ L+LP+S  P SV  +G       S   A+    
Subjt:  ------------------------PSTTTQ----GLKRRSSFSYSHIGSILPPRSIRQKRNIHLSKGLSLPISSRPNSVPVDGLSFDASQSSKFAKVRHF

Query:  QSPIRNLQLPLKPKISFPRKSIMNVESNSITGAGSSSIYTPSYHVMASKILEQLTPSKKKVSALSQLPVGEKAPLKLSPFTI-GEHQRNVKDVDLPSEEF
                                     I G+  + + T S   MASKIL+QL    K VS        EK+P KLSP  + G   +++++V+ P    
Subjt:  QSPIRNLQLPLKPKISFPRKSIMNVESNSITGAGSSSIYTPSYHVMASKILEQLTPSKKKVSALSQLPVGEKAPLKLSPFTI-GEHQRNVKDVDLPSEEF

Query:  VHEEKQSNGLHWIPYHDNQDDTFQ----NREKPENMKPLDPHHRCALLKNSGSIGCNNDSTNNLEVPACAVVKSIIQPPVNKPAFQMVPDKDSLDHDESS
           EK++N         + D ++Q    +RE                +  +   G + D     +     +  S+ + P  K +F+M   +D L+ D+  
Subjt:  VHEEKQSNGLHWIPYHDNQDDTFQ----NREKPENMKPLDPHHRCALLKNSGSIGCNNDSTNNLEVPACAVVKSIIQPPVNKPAFQMVPDKDSLDHDESS

Query:  DHIVPATAEVIESDNCLALRQI-----TANEALAPANSQTTSEVIVDSPLNRSSDSKTFDERIDEDMVTRFTLQNASSLATASQPETIDSAPTNSLGS-K
                EV E  N   + +         + L P+ +  ++  I +   ++ + + + +   ++ +         S++A+    + I     +S+ S K
Subjt:  DHIVPATAEVIESDNCLALRQI-----TANEALAPANSQTTSEVIVDSPLNRSSDSKTFDERIDEDMVTRFTLQNASSLATASQPETIDSAPTNSLGS-K

Query:  DLPENK-----QNDSPDFSFEN-NISP-----------------RKHTSLTTFDDGNKDASPTESH-------------------------------FAP
           E K     +   P   F N + SP                  + TS T F      A PTES                                  P
Subjt:  DLPENK-----QNDSPDFSFEN-NISP-----------------RKHTSLTTFDDGNKDASPTESH-------------------------------FAP

Query:  KNCNGA-----PCPYTQSNPAS--SYSDVQESVYLNADISSNHELDRSWGTCNDAFSFWSSARTQSSTNGPSISCPSLFSSHGSSIASTSQSSSRNIFLS
           NG+       P + SN  S  S  D+  +V   A   ++  +     T ND+ S  +SA   SST+      P+   S  +   S+ Q S      +
Subjt:  KNCNGA-----PCPYTQSNPAS--SYSDVQESVYLNADISSNHELDRSWGTCNDAFSFWSSARTQSSTNGPSISCPSLFSSHGSSIASTSQSSSRNIFLS

Query:  ATTDNHPSTTNLAPSFAPSTTGLVTYEEQIKQDASP-------NKENDTYFNSIT----TPEISNNSMSSFGAAATPSSMNDRLGTPTVINATELGAQEV
        AT  N  +      + A  +TG+V   +  +  + P       +    +  N  T     PE S + +    +++TP +   ++   +   AT  G   V
Subjt:  ATTDNHPSTTNLAPSFAPSTTGLVTYEEQIKQDASP-------NKENDTYFNSIT----TPEISNNSMSSFGAAATPSSMNDRLGTPTVINATELGAQEV

Query:  SAGKEFIANAERAPMVSPSSMLNASSGMAGKSSDSSAISFGCSSSASELFNQG----------------SIPSEFPINGLTSDPATSTIGTSYDATSSTR
             F   +  + MV   S    SS + G ++ SSA +    S AS LF  G                SIP +F      S P+    G S  A++S+ 
Subjt:  SAGKEFIANAERAPMVSPSSMLNASSGMAGKSSDSSAISFGCSSSASELFNQG----------------SIPSEFPINGLTSDPATSTIGTSYDATSSTR

Query:  LGFESSTVASFSSICPTTSSATALVGSSLKPVSS
         GF  S  A F+S+     S+T    SS   +SS
Subjt:  LGFESSTVASFSSICPTTSSATALVGSSLKPVSS

Arabidopsis top hits

e value

%identity

Alignment

AT3G10650.1 BEST Arabidopsis thaliana protein match is: nucleoporin-related (TAIR:AT5G20200.1)

1.9e-12

23.81

Show/hide

Query:  LRTAGKFTDGRFLRKSPAKPYDRPPAPTGK----------NSWILKLVDPAQRLISSGSQMLSSSAFR-RLASRESSQSRKDDKKEDGTVPFEFQVEETN
        L T GKF      R+S   PYDRP                  W+ KLVDPAQRLI+  +Q L  S  R RL S E+     + +K+   +P     +ET 
Subjt:  LRTAGKFTDGRFLRKSPAKPYDRPPAPTGK----------NSWILKLVDPAQRLISSGSQMLSSSAFR-RLASRESSQSRKDDKKEDGTVPFEFQVEETN

Query:  VVENWDKSE--------------------QFGMMELERTMKQKTFTRSQIAHLTALLHSRTVDLPVEIEEKKFEFISSIPKSIRKEFDEVPNSEVTMDRQ
        V    D S                     + G  +LE+ ++ KTFTRS++  LT LL S+  D     EE++ E    +      E D       +M+  
Subjt:  VVENWDKSE--------------------QFGMMELERTMKQKTFTRSQIAHLTALLHSRTVDLPVEIEEKKFEFISSIPKSIRKEFDEVPNSEVTMDRQ

Query:  SISTPILTSSVLDEDISSPAEIARAYMHSKLRKVCPSIQSSRATRLGENSAGSNSQSFSSKSTDLLLV--------------------------------
         +STP  +   LDE I+SPA++A+AYM S+  +V PS+   R     E+S   N   F  KS  + LV                                
Subjt:  SISTPILTSSVLDEDISSPAEIARAYMHSKLRKVCPSIQSSRATRLGENSAGSNSQSFSSKSTDLLLV--------------------------------

Query:  ------------------------PSTTTQ----GLKRRSSFSYSHIGSILPPRSIRQKRNIHLSKGLSLPISSRPNSVPVDGLSFDASQSSKFAKVRHF
                                PS + Q    GLKRRSS   + IGS+ P R IRQK N+  S+ L+LP+S  P SV  +G       S   A+    
Subjt:  ------------------------PSTTTQ----GLKRRSSFSYSHIGSILPPRSIRQKRNIHLSKGLSLPISSRPNSVPVDGLSFDASQSSKFAKVRHF

Query:  QSPIRNLQLPLKPKISFPRKSIMNVESNSITGAGSSSIYTPSYHVMASKILEQLTPSKKKVSALSQLPVGEKAPLKLSPFTI-GEHQRNVKDVDLPSEEF
                                     I G+  + + T S   MASKIL+QL    K VS        EK+P KLSP  + G   +++++V+ P    
Subjt:  QSPIRNLQLPLKPKISFPRKSIMNVESNSITGAGSSSIYTPSYHVMASKILEQLTPSKKKVSALSQLPVGEKAPLKLSPFTI-GEHQRNVKDVDLPSEEF

Query:  VHEEKQSNGLHWIPYHDNQDDTFQ----NREKPENMKPLDPHHRCALLKNSGSIGCNNDSTNNLEVPACAVVKSIIQPPVNKPAFQMVPDKDSLDHDESS
           EK++N         + D ++Q    +RE                +  +   G + D     +     +  S+ + P  K +F+M   +D L+ D+  
Subjt:  VHEEKQSNGLHWIPYHDNQDDTFQ----NREKPENMKPLDPHHRCALLKNSGSIGCNNDSTNNLEVPACAVVKSIIQPPVNKPAFQMVPDKDSLDHDESS

Query:  DHIVPATAEVIESDNCLALRQI-----TANEALAPANSQTTSEVIVDSPLNRSSDSKTFDERIDEDMVTRFTLQNASSLATASQPETIDSAPTNSLGS-K
                EV E  N   + +         + L P+ +  ++  I +   ++ + + + +   ++ +         S++A+    + I     +S+ S K
Subjt:  DHIVPATAEVIESDNCLALRQI-----TANEALAPANSQTTSEVIVDSPLNRSSDSKTFDERIDEDMVTRFTLQNASSLATASQPETIDSAPTNSLGS-K

Query:  DLPENK-----QNDSPDFSFEN-NISP-----------------RKHTSLTTFDDGNKDASPTESH-------------------------------FAP
           E K     +   P   F N + SP                  + TS T F      A PTES                                  P
Subjt:  DLPENK-----QNDSPDFSFEN-NISP-----------------RKHTSLTTFDDGNKDASPTESH-------------------------------FAP

Query:  KNCNGA-----PCPYTQSNPAS--SYSDVQESVYLNADISSNHELDRSWGTCNDAFSFWSSARTQSSTNGPSISCPSLFSSHGSSIASTSQSSSRNIFLS
           NG+       P + SN  S  S  D+  +V   A   ++  +     T ND+ S  +SA   SST+      P+   S  +   S+ Q S      +
Subjt:  KNCNGA-----PCPYTQSNPAS--SYSDVQESVYLNADISSNHELDRSWGTCNDAFSFWSSARTQSSTNGPSISCPSLFSSHGSSIASTSQSSSRNIFLS

Query:  ATTDNHPSTTNLAPSFAPSTTGLVTYEEQIKQDASP-------NKENDTYFNSIT----TPEISNNSMSSFGAAATPSSMNDRLGTPTVINATELGAQEV
        AT  N  +      + A  +TG+V   +  +  + P       +    +  N  T     PE S + +    +++TP +   ++   +   AT  G   V
Subjt:  ATTDNHPSTTNLAPSFAPSTTGLVTYEEQIKQDASP-------NKENDTYFNSIT----TPEISNNSMSSFGAAATPSSMNDRLGTPTVINATELGAQEV

Query:  SAGKEFIANAERAPMVSPSSMLNASSGMAGKSSDSSAISFGCSSSASELFNQG----------------SIPSEFPINGLTSDPATSTIGTSYDATSSTR
             F   +  + MV   S    SS + G ++ SSA +    S AS LF  G                SIP +F      S P+    G S  A++S+ 
Subjt:  SAGKEFIANAERAPMVSPSSMLNASSGMAGKSSDSSAISFGCSSSASELFNQG----------------SIPSEFPINGLTSDPATSTIGTSYDATSSTR

Query:  LGFESSTVASFSSICPTTSSATALVGSSLKPVSS
         GF  S  A F+S+     S+T    SS   +SS
Subjt:  LGFESSTVASFSSICPTTSSATALVGSSLKPVSS

AT5G20200.1 nucleoporin-related

5.9e-06

25.97

Show/hide

Query:  RKSPAKPYDRPPA-PTGKNSWILKLVDPAQRLISSGSQMLSSSAFRRLASRESSQSRKDDKKE------------DGTV--------PFEFQVEETNVVE
        R+  A PY RP      +  WI ++VDPA R+IS G+  +    F   AS  +  +  +D+ +            D +V        P   +V   +   
Subjt:  RKSPAKPYDRPPA-PTGKNSWILKLVDPAQRLISSGSQMLSSSAFRRLASRESSQSRKDDKKE------------DGTV--------PFEFQVEETNVVE

Query:  NWDK---------------SEQFGMMELERTMKQKTFTRSQIAHLTALLHSRTVDLP-VEIEEKKFEF-ISSIPKSIRKEFDE----VPNSEVTMDRQSI
        N ++               ++   + ELER M+ KTF++++I  L  ++ SR +DLP V+ +E+  E  +    K     FD+    +   +   +  + 
Subjt:  NWDK---------------SEQFGMMELERTMKQKTFTRSQIAHLTALLHSRTVDLP-VEIEEKKFEF-ISSIPKSIRKEFDE----VPNSEVTMDRQSI

Query:  STPILTSSVLDEDI------SSPAEIARAYM
         TP+  S +LD D        SPAE+A+AYM
Subjt:  STPILTSSVLDEDI------SSPAEIARAYM

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCGACTGCGAGGAAACAGCAAATCCAAGAAGAAGAAGAAGAAGAAGAATGGTTGAGAACAGCCGGAAAATTTACAGATGGAAGATTCTTAAGGAAATCGCCGGCGAA
GCCTTACGATCGGCCGCCGGCGCCGACTGGAAAGAATTCGTGGATCTTGAAGCTCGTTGATCCCGCGCAAAGGCTCATTTCCTCTGGCTCTCAGATGCTTTCTTCCTCCG
CATTCCGCCGCTTAGCGTCTCGAGAATCAAGCCAATCAAGAAAGGATGACAAGAAGGAAGATGGAACGGTTCCTTTTGAATTCCAAGTAGAAGAAACCAATGTAGTTGAA
AATTGGGATAAATCTGAGCAATTTGGGATGATGGAGCTTGAAAGAACTATGAAGCAGAAGACCTTCACCCGGTCTCAGATTGCTCATTTGACAGCCCTATTACATTCAAG
AACTGTTGATTTACCTGTTGAGATTGAGGAAAAGAAGTTCGAGTTCATATCTTCTATTCCAAAATCTATCAGGAAGGAGTTTGATGAAGTACCAAATTCAGAAGTTACGA
TGGACAGGCAATCGATCTCAACTCCCATCTTGACTTCAAGTGTCCTTGATGAAGATATTTCTTCACCTGCAGAGATAGCAAGGGCATATATGCACAGTAAGCTGCGAAAA
GTTTGTCCTTCAATTCAATCTTCACGAGCTACAAGACTTGGGGAAAATTCAGCTGGTTCAAATAGTCAATCATTCTCTTCAAAATCAACCGATTTGTTGCTTGTGCCATC
AACTACTACTCAGGGTTTGAAACGTAGGAGTTCATTTTCTTATAGTCACATTGGATCCATTCTTCCTCCACGCAGTATTCGACAAAAACGTAACATCCATCTTTCAAAGG
GATTAAGCTTACCCATTTCTTCTAGACCTAATTCTGTTCCTGTAGATGGACTTAGTTTTGATGCTTCTCAGAGCTCCAAATTTGCGAAAGTTCGTCATTTTCAATCTCCC
ATTAGGAACTTACAATTGCCTCTTAAACCCAAGATCTCTTTTCCAAGAAAGTCTATTATGAATGTGGAGAGTAATAGCATTACTGGTGCAGGAAGCAGTTCTATTTATAC
TCCAAGTTATCATGTGATGGCTTCTAAAATATTGGAGCAGTTGACCCCTTCAAAGAAGAAAGTATCTGCACTTAGTCAACTCCCTGTTGGGGAAAAAGCTCCCCTAAAAT
TATCACCATTTACAATAGGTGAGCATCAAAGAAATGTGAAGGATGTGGACTTACCGAGTGAAGAATTTGTTCATGAAGAAAAACAGTCAAATGGTTTACACTGGATCCCA
TATCATGACAACCAAGATGATACCTTCCAAAATAGAGAAAAGCCAGAAAATATGAAACCATTGGATCCTCATCATAGATGTGCTCTACTGAAGAACTCTGGGTCAATAGG
CTGTAATAATGATTCCACGAATAATCTAGAAGTGCCTGCATGTGCTGTGGTGAAATCTATTATTCAGCCCCCCGTCAACAAACCGGCATTTCAGATGGTGCCTGATAAGG
ATAGTCTTGACCATGATGAAAGTTCTGATCATATTGTACCAGCTACAGCGGAGGTTATAGAGAGTGATAATTGTTTGGCTCTGAGACAGATTACTGCAAATGAAGCCCTT
GCGCCAGCAAATTCACAAACTACATCTGAAGTGATAGTAGATTCTCCTCTCAACAGAAGCTCTGATTCGAAAACTTTTGATGAAAGAATCGATGAAGATATGGTTACAAG
ATTTACTTTACAAAATGCATCTTCGCTTGCCACAGCTTCACAACCGGAAACTATCGATTCTGCACCAACCAATTCTTTGGGAAGCAAGGATCTTCCAGAAAATAAGCAAA
ATGATTCTCCGGATTTCAGCTTTGAGAATAATATCTCTCCACGAAAACACACTAGTTTAACTACATTTGATGATGGGAATAAGGATGCTTCACCAACAGAATCACATTTT
GCTCCAAAAAATTGCAATGGAGCTCCATGCCCATACACACAGAGCAATCCAGCTTCTTCATATTCAGATGTTCAAGAATCAGTATATTTAAACGCTGATATTTCATCAAA
CCACGAGCTGGATCGCTCTTGGGGGACATGCAATGATGCATTCTCATTTTGGTCGTCTGCTCGCACTCAAAGTTCAACTAATGGACCTTCCATTTCATGTCCATCTCTAT
TCTCTTCCCACGGTTCGTCAATTGCGTCTACGAGTCAAAGTTCATCCAGAAATATCTTCCTCTCTGCCACTACTGACAACCACCCCTCAACCACAAATCTGGCACCTTCA
TTTGCTCCATCAACTACTGGTCTAGTAACTTACGAAGAACAGATAAAACAGGATGCGAGCCCGAACAAAGAAAATGACACTTATTTCAATAGCATAACTACGCCAGAAAT
TTCTAATAACAGTATGTCCAGCTTCGGCGCTGCAGCAACACCGTCATCTATGAATGATCGGCTTGGTACACCTACTGTTATCAATGCAACCGAGCTTGGTGCTCAGGAGG
TTTCTGCTGGAAAGGAATTTATAGCTAATGCAGAAAGAGCACCAATGGTTTCGCCGTCATCCATGTTGAATGCATCATCGGGGATGGCTGGAAAGTCATCCGACTCTTCT
GCGATTTCTTTTGGATGCTCATCTTCTGCTTCTGAACTGTTTAATCAGGGAAGCATACCATCAGAATTTCCCATCAATGGGCTTACCAGTGACCCTGCAACTTCAACCAT
TGGTACCTCCTATGATGCAACTTCTAGCACGCGTCTTGGATTTGAGTCATCTACAGTAGCATCTTTCAGTTCCATATGTCCTACAACATCATCAGCCACCGCCTTAGTAG
GCTCCTCGTTGAAGCCGGTTTCGAGTAATTCTCATCCCAAAGTTGCTATTAGAGTTTCTTCAGGCAACAATCAATTTGAAGCGCGGGGTATCTCCAAGGACAATGCTCCA
CTTTTTAGACAAAAGCCAATCCCGCCCCTTTCATCAGGATTATCTTTTCGTCCAGCTGCATCTGTGTTAAATCCTTCTCAAGTTGGAAAGCGGCAGAATTATAGTAGCCT
AGAAGCTAAAGCTAGAGGCAGCTTCACCTTGAGTGTTGGCGATGGCGATGGCGATAAGGCTAGACGGAGATTTGTGAAGTTTAGGCGAAAGAAACAACGAAAACATCACT
GGCAGAGTTGA

mRNA sequence

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Protein sequence

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MATARKQQIQEEEEEEEWLRTAGKFTDGRFLRKSPAKPYDRPPAPTGKNSWILKLVDPAQRLISSGSQMLSSSAFRRLASRESSQSRKDDKKEDGTVPFEFQVEETNVVE
NWDKSEQFGMMELERTMKQKTFTRSQIAHLTALLHSRTVDLPVEIEEKKFEFISSIPKSIRKEFDEVPNSEVTMDRQSISTPILTSSVLDEDISSPAEIARAYMHSKLRK
VCPSIQSSRATRLGENSAGSNSQSFSSKSTDLLLVPSTTTQGLKRRSSFSYSHIGSILPPRSIRQKRNIHLSKGLSLPISSRPNSVPVDGLSFDASQSSKFAKVRHFQSP
IRNLQLPLKPKISFPRKSIMNVESNSITGAGSSSIYTPSYHVMASKILEQLTPSKKKVSALSQLPVGEKAPLKLSPFTIGEHQRNVKDVDLPSEEFVHEEKQSNGLHWIP
YHDNQDDTFQNREKPENMKPLDPHHRCALLKNSGSIGCNNDSTNNLEVPACAVVKSIIQPPVNKPAFQMVPDKDSLDHDESSDHIVPATAEVIESDNCLALRQITANEAL
APANSQTTSEVIVDSPLNRSSDSKTFDERIDEDMVTRFTLQNASSLATASQPETIDSAPTNSLGSKDLPENKQNDSPDFSFENNISPRKHTSLTTFDDGNKDASPTESHF
APKNCNGAPCPYTQSNPASSYSDVQESVYLNADISSNHELDRSWGTCNDAFSFWSSARTQSSTNGPSISCPSLFSSHGSSIASTSQSSSRNIFLSATTDNHPSTTNLAPS
FAPSTTGLVTYEEQIKQDASPNKENDTYFNSITTPEISNNSMSSFGAAATPSSMNDRLGTPTVINATELGAQEVSAGKEFIANAERAPMVSPSSMLNASSGMAGKSSDSS
AISFGCSSSASELFNQGSIPSEFPINGLTSDPATSTIGTSYDATSSTRLGFESSTVASFSSICPTTSSATALVGSSLKPVSSNSHPKVAIRVSSGNNQFEARGISKDNAP
LFRQKPIPPLSSGLSFRPAASVLNPSQVGKRQNYSSLEAKARGSFTLSVGDGDGDKARRRFVKFRRKKQRKHHWQS

Sed0011841 (gene) of Chayote v1 genome