CuGenDBv2

Gene ID	Sed0011846
Organism	Sechium edule (Chayote v1)
Description	CCHC-type domain-containing protein
Genome location	LG05:40405958..40408148
RNA-Seq Expression	Sed0011846
Synteny	Sed0011846
Gene Ontology terms	GO:0003676 - nucleic acid binding (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7010551.1 CAX-interacting protein 4, partial [Cucurbita argyrosperma subsp. argyrosperma]

6.2e-126

85.67

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Query:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDSGKNSAQQNTAASEPDAENAYASFQGLLALARITGSNATEVRGACKRCGRVGHLSFQ
        MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDD+ K+SAQQNTA+SEP+AENAYASFQGLLALARITGSNA EVRGACKRCGRVGHLSFQ
Subjt:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDSGKNSAQQNTAASEPDAENAYASFQGLLALARITGSNATEVRGACKRCGRVGHLSFQ

Query:  CRNFLSV---KEKDTEGVQADVMSELDKLKGNMGKGNGKGAVDSDGESEEEESESSDSDADPEIERIIAEREGKRTSKRRSLKRKDKSGDDELGSDESGS
        CRNFLSV   KEKD E +QADVMSELDKLKGN+GKGNGKGAV+SD ESEEEESESSDSDAD EIERIIAEREGKRTSK+RSLKRK     D+L  D SGS
Subjt:  CRNFLSV---KEKDTEGVQADVMSELDKLKGNMGKGNGKGAVDSDGESEEEESESSDSDADPEIERIIAEREGKRTSKRRSLKRKDKSGDDELGSDESGS

Query:  DSREKKRGRSKRRSRRRESEDSDDSRRKRRKEKRRKIEDSSDDDGEKVKRHHRKSRKEKRRRRSHRYSDDSDSDTSEESHGKHKHKSKRTV-LTDSEASS
        DSREKKRGRSKRRSRRRES DSDDSRRKRRKEK RK +DSS D+GE +KR HRKSRKEKRRRRSHRYSDDSDSDTSEESH +HKHKS++T  LTDSE SS
Subjt:  DSREKKRGRSKRRSRRRESEDSDDSRRKRRKEKRRKIEDSSDDDGEKVKRHHRKSRKEKRRRRSHRYSDDSDSDTSEESHGKHKHKSKRTV-LTDSEASS

Query:  SDDTRGRARKRSEKRSRRSRKHRREDDE
        SDDTRGRARKRSEK   RSRKHR E+DE
Subjt:  SDDTRGRARKRSEKRSRRSRKHRREDDE

XP_022148397.1 CAX-interacting protein 4 isoform X1 [Momordica charantia]

9.2e-122

84.15

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Query:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDSGKNSAQQNTAASEPDAENAYASFQGLLALARITGSNATEVRGACKRCGRVGHLSFQ
        MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDD+ KNSAQ NTA+SEP+AENAYASFQGLLALARITGSNA EVRGACKRCGRVGHLSFQ
Subjt:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDSGKNSAQQNTAASEPDAENAYASFQGLLALARITGSNATEVRGACKRCGRVGHLSFQ

Query:  CRNFLSV---KEKDTEGVQADVMSELDKLKGNMGKGNGKGAVDSDGESEEEESESSDSDADPEIERIIAEREGKRTS-KRRSLKRKDKSGDDELGSDESG
        CRNFLSV   KEKD E +QADVMSELDKLKGN+GK  GKGAV+SD ESEE+ESESSDSD D EIERIIAER GK+ S K+RSLKRK     D+L  D SG
Subjt:  CRNFLSV---KEKDTEGVQADVMSELDKLKGNMGKGNGKGAVDSDGESEEEESESSDSDADPEIERIIAEREGKRTS-KRRSLKRKDKSGDDELGSDESG

Query:  SDSREKKRGRSKRRSRRRESEDSDDSRRKRRKEKRRKIEDSSDDDGEKVKRHHRKSRKEKRRRRSHRYSDDSDSDTSEESHGKHKHKSKRTVLTDSEASS
        SDSREKKRGRSKRRSRRRES+DSDD+RRKRRKEK RK +DSS D+GEK+KR HRKSRKEKRRRRSHRYSDDSDSDTSEESHG+HKHKS++  LTDSEASS
Subjt:  SDSREKKRGRSKRRSRRRESEDSDDSRRKRRKEKRRKIEDSSDDDGEKVKRHHRKSRKEKRRRRSHRYSDDSDSDTSEESHGKHKHKSKRTVLTDSEASS

Query:  SDDTRGRARKRSEKRSRRSRKHRREDDE
        SDDTRGRARKRSEK   RSRKHRRE DE
Subjt:  SDDTRGRARKRSEKRSRRSRKHRREDDE

XP_022943818.1 CAX-interacting protein 4 [Cucurbita moschata]

3.4e-124

85.06

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Query:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDSGKNSAQQNTAASEPDAENAYASFQGLLALARITGSNATEVRGACKRCGRVGHLSFQ
        MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDD+ K+SAQQNTA+SEP+AENAYASFQGLLALARITGSNA EVRGACKRCGRVGHLSFQ
Subjt:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDSGKNSAQQNTAASEPDAENAYASFQGLLALARITGSNATEVRGACKRCGRVGHLSFQ

Query:  CRNFLSV---KEKDTEGVQADVMSELDKLKGNMGKGNGKGAVDSDGESEEEESESSDSDADPEIERIIAEREGKRTSKRRSLKRKDKSGDDELGSDESGS
        CRNFLSV   KEKD E +QADVMSELDKLKGN+GKGNGKGAV+SD ESEEEESESSDSDAD EIERIIAEREGKRTSK+RSLKRK     D+L  D SGS
Subjt:  CRNFLSV---KEKDTEGVQADVMSELDKLKGNMGKGNGKGAVDSDGESEEEESESSDSDADPEIERIIAEREGKRTSKRRSLKRKDKSGDDELGSDESGS

Query:  DSREKKRGRSKRRSRRRESEDSDDSRRKRRKEKRRKIEDSSDDDGEKVKRHHRKSRKEKRRRRSHRYSDDSDSDTSEESHGKHKHKSKRTV-LTDSEASS
        DSREKKRGRSKRRSRRRES DSDDSRRKRRKEK RK +DSS D+GE +KR HRKSRKEKRRRRSHRYSDDSDSDTSEESH +HKHKS++   LTDSE SS
Subjt:  DSREKKRGRSKRRSRRRESEDSDDSRRKRRKEKRRKIEDSSDDDGEKVKRHHRKSRKEKRRRRSHRYSDDSDSDTSEESHGKHKHKSKRTV-LTDSEASS

Query:  SDDTRGRARKRSEKRSRRSRKHRREDDE
        S DTRGRARKRSEK   RSRKHR E+DE
Subjt:  SDDTRGRARKRSEKRSRRSRKHRREDDE

XP_022986903.1 CAX-interacting protein 4 [Cucurbita maxima]

1.1e-122

84.15

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Query:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDSGKNSAQQNTAASEPDAENAYASFQGLLALARITGSNATEVRGACKRCGRVGHLSFQ
        MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDD+ K+SAQQNTA+SEP+AENAYASFQGLLALARITGSNA EVRGACKRCGRVGHLSFQ
Subjt:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDSGKNSAQQNTAASEPDAENAYASFQGLLALARITGSNATEVRGACKRCGRVGHLSFQ

Query:  CRNFLSV---KEKDTEGVQADVMSELDKLKGNMGKGNGKGAVDSDGESEEEESESSDSDADPEIERIIAEREGKRTSKRRSLKRKDKSGDDELGSDESGS
        CRNFLSV   KEKD E +QADVMSELDKLKGN+GKGNGKGAV+SD ESEEEESESSDSDAD EIERIIAEREGKRTSK+RSLKRK     D+L  D SGS
Subjt:  CRNFLSV---KEKDTEGVQADVMSELDKLKGNMGKGNGKGAVDSDGESEEEESESSDSDADPEIERIIAEREGKRTSKRRSLKRKDKSGDDELGSDESGS

Query:  DSREKKRGRSKRRSRRRESEDSDDSRRKRRKEKRRKIEDSSDDDGEKVKRHHRKSRKEKRRRRSHRYSDDSDSDTSEESHGKHKHKSKRTV-LTDSEASS
        DSREKKRGRSKRRSRRRES DSDD+RRKRRKEK RK +DSS D+GEK+KR HRKSRKEKRRRRSHRYSDDSDSDTSEESH +HK K ++   LTDS+ SS
Subjt:  DSREKKRGRSKRRSRRRESEDSDDSRRKRRKEKRRKIEDSSDDDGEKVKRHHRKSRKEKRRRRSHRYSDDSDSDTSEESHGKHKHKSKRTV-LTDSEASS

Query:  SDDTRGRARKRSEKRSRRSRKHRREDDE
        SDD RGRARKRSEK   RSRKHR E+DE
Subjt:  SDDTRGRARKRSEKRSRRSRKHRREDDE

XP_023511989.1 CAX-interacting protein 4 [Cucurbita pepo subsp. pepo]

1.4e-125

85.37

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Query:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDSGKNSAQQNTAASEPDAENAYASFQGLLALARITGSNATEVRGACKRCGRVGHLSFQ
        MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDD+ K+SAQQNTA+SEP+AENAYASFQGLLALARITGSNA EVRGACKRCGRVGHLSFQ
Subjt:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDSGKNSAQQNTAASEPDAENAYASFQGLLALARITGSNATEVRGACKRCGRVGHLSFQ

Query:  CRNFLSV---KEKDTEGVQADVMSELDKLKGNMGKGNGKGAVDSDGESEEEESESSDSDADPEIERIIAEREGKRTSKRRSLKRKDKSGDDELGSDESGS
        CRNFLSV   KEKD E +QADVMSELDKLKGN+GKGNGKGAV+S+ ESEEEESESSDSDAD EIERIIAEREGKRTSK+RSLKRK     D+L  D SGS
Subjt:  CRNFLSV---KEKDTEGVQADVMSELDKLKGNMGKGNGKGAVDSDGESEEEESESSDSDADPEIERIIAEREGKRTSKRRSLKRKDKSGDDELGSDESGS

Query:  DSREKKRGRSKRRSRRRESEDSDDSRRKRRKEKRRKIEDSSDDDGEKVKRHHRKSRKEKRRRRSHRYSDDSDSDTSEESHGKHKHKSKRTV-LTDSEASS
        DSREKKRGRSKRRS RRES DSDDSRRKRRKEKRRKI+DSS D+GE +KR HRKSRKEKRRRRSHRYSDDSDSDTSEESH +HKHKS++   LTDSE SS
Subjt:  DSREKKRGRSKRRSRRRESEDSDDSRRKRRKEKRRKIEDSSDDDGEKVKRHHRKSRKEKRRRRSHRYSDDSDSDTSEESHGKHKHKSKRTV-LTDSEASS

Query:  SDDTRGRARKRSEKRSRRSRKHRREDDE
        SDDTRGRARKRSEK   RSRKHR E+DE
Subjt:  SDDTRGRARKRSEKRSRRSRKHRREDDE

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KHA7 CCHC-type domain-containing protein

4.6e-119

83.49

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Query:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDSGKNSAQQNTAASEPDAENAYASFQGLLALARITGSNATEVRGACKRCGRVGHLSFQ
        MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDD+ KN+AQQNTA+SEPDAENAYASFQGLLALARITGSNA EVRGACKRCGRVGHLSFQ
Subjt:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDSGKNSAQQNTAASEPDAENAYASFQGLLALARITGSNATEVRGACKRCGRVGHLSFQ

Query:  CRNFLSV---KEKDTEGVQADVMSELDKLKGNMGKGNGKGAVDSDGESEEEESESSDSDADPEIERIIAEREGKRTSKRRSLKRKDKSGDDELGSDESGS
        CRNFLSV   KEKD E +QADVMSELDKLKG      GKG V+S+ ESEEEESESSDSDAD EIERIIAEREGKR SK+RSLKRKD S D     D SGS
Subjt:  CRNFLSV---KEKDTEGVQADVMSELDKLKGNMGKGNGKGAVDSDGESEEEESESSDSDADPEIERIIAEREGKRTSKRRSLKRKDKSGDDELGSDESGS

Query:  DSREKKRGRSKRRSRRRESEDSDDSRRKRRKEKRRKIEDSSDDDGEKVKRHHRKSRKEKRRRRSHRYSDDSDSDTSEESHGKHKHKSKRTV-LTDSEASS
        DSREKKRGRSKRRS RR+S DSDDSRRKRRKEK RK +DSSD+D EK +RHHRKSRKEKRRRRSHRYSDDSDSDTSEE+HG+HKHKS++   LTDSEASS
Subjt:  DSREKKRGRSKRRSRRRESEDSDDSRRKRRKEKRRKIEDSSDDDGEKVKRHHRKSRKEKRRRRSHRYSDDSDSDTSEESHGKHKHKSKRTV-LTDSEASS

Query:  SDDTRGRARKRSEKRSRRSRKHRREDD
        SDDTRGRARKRSEK   RSRKHR ED+
Subjt:  SDDTRGRARKRSEKRSRRSRKHRREDD

A0A6J1D3V6 CAX-interacting protein 4 isoform X2

1.7e-121

84.31

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Query:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDSGKNSAQQNTAASEPDAENAYASFQGLLALARITGSNATEVRGACKRCGRVGHLSFQ
        MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDD+ KNSAQ NTA+SEP+AENAYASFQGLLALARITGSNA EVRGACKRCGRVGHLSFQ
Subjt:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDSGKNSAQQNTAASEPDAENAYASFQGLLALARITGSNATEVRGACKRCGRVGHLSFQ

Query:  CRNFLSV---KEKDTEGVQADVMSELDKLKGNMGKGNGKGAVDSDGESEEEESESSDSDADPEIERIIAEREGKRTS-KRRSLKRKDKSGDDELGSDESG
        CRNFLSV   KEKD E +QADVMSELDKLKGN+GK  GKGAV+SD ESEE+ESESSDSD D EIERIIAER GK+ S K+RSLKRK     D+L  D SG
Subjt:  CRNFLSV---KEKDTEGVQADVMSELDKLKGNMGKGNGKGAVDSDGESEEEESESSDSDADPEIERIIAEREGKRTS-KRRSLKRKDKSGDDELGSDESG

Query:  SDSREKKRGRSKRRSRRRESEDSDDSRRKRRKEKRRKIEDSSDDDGEKVKRHHRKSRKEKRRRRSHRYSDDSDSDTSEESHGKHKHKSKRTVLTDSEASS
        SDSREKKRGRSKRRSRRRES+DSDD+RRKRRKEK RK +DSS D+GEK+KR HRKSRKEKRRRRSHRYSDDSDSDTSEESHG+HKHKS++  LTDSEASS
Subjt:  SDSREKKRGRSKRRSRRRESEDSDDSRRKRRKEKRRKIEDSSDDDGEKVKRHHRKSRKEKRRRRSHRYSDDSDSDTSEESHGKHKHKSKRTVLTDSEASS

Query:  SDDTRGRARKRSEKRSRRSRKHRRE
        SDDTRGRARKRSEK   RSRKHRRE
Subjt:  SDDTRGRARKRSEKRSRRSRKHRRE

A0A6J1D3Z8 CAX-interacting protein 4 isoform X1

4.5e-122

84.15

Show/hide

Query:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDSGKNSAQQNTAASEPDAENAYASFQGLLALARITGSNATEVRGACKRCGRVGHLSFQ
        MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDD+ KNSAQ NTA+SEP+AENAYASFQGLLALARITGSNA EVRGACKRCGRVGHLSFQ
Subjt:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDSGKNSAQQNTAASEPDAENAYASFQGLLALARITGSNATEVRGACKRCGRVGHLSFQ

Query:  CRNFLSV---KEKDTEGVQADVMSELDKLKGNMGKGNGKGAVDSDGESEEEESESSDSDADPEIERIIAEREGKRTS-KRRSLKRKDKSGDDELGSDESG
        CRNFLSV   KEKD E +QADVMSELDKLKGN+GK  GKGAV+SD ESEE+ESESSDSD D EIERIIAER GK+ S K+RSLKRK     D+L  D SG
Subjt:  CRNFLSV---KEKDTEGVQADVMSELDKLKGNMGKGNGKGAVDSDGESEEEESESSDSDADPEIERIIAEREGKRTS-KRRSLKRKDKSGDDELGSDESG

Query:  SDSREKKRGRSKRRSRRRESEDSDDSRRKRRKEKRRKIEDSSDDDGEKVKRHHRKSRKEKRRRRSHRYSDDSDSDTSEESHGKHKHKSKRTVLTDSEASS
        SDSREKKRGRSKRRSRRRES+DSDD+RRKRRKEK RK +DSS D+GEK+KR HRKSRKEKRRRRSHRYSDDSDSDTSEESHG+HKHKS++  LTDSEASS
Subjt:  SDSREKKRGRSKRRSRRRESEDSDDSRRKRRKEKRRKIEDSSDDDGEKVKRHHRKSRKEKRRRRSHRYSDDSDSDTSEESHGKHKHKSKRTVLTDSEASS

Query:  SDDTRGRARKRSEKRSRRSRKHRREDDE
        SDDTRGRARKRSEK   RSRKHRRE DE
Subjt:  SDDTRGRARKRSEKRSRRSRKHRREDDE

A0A6J1FXE5 CAX-interacting protein 4

1.6e-124

85.06

Show/hide

Query:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDSGKNSAQQNTAASEPDAENAYASFQGLLALARITGSNATEVRGACKRCGRVGHLSFQ
        MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDD+ K+SAQQNTA+SEP+AENAYASFQGLLALARITGSNA EVRGACKRCGRVGHLSFQ
Subjt:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDSGKNSAQQNTAASEPDAENAYASFQGLLALARITGSNATEVRGACKRCGRVGHLSFQ

Query:  CRNFLSV---KEKDTEGVQADVMSELDKLKGNMGKGNGKGAVDSDGESEEEESESSDSDADPEIERIIAEREGKRTSKRRSLKRKDKSGDDELGSDESGS
        CRNFLSV   KEKD E +QADVMSELDKLKGN+GKGNGKGAV+SD ESEEEESESSDSDAD EIERIIAEREGKRTSK+RSLKRK     D+L  D SGS
Subjt:  CRNFLSV---KEKDTEGVQADVMSELDKLKGNMGKGNGKGAVDSDGESEEEESESSDSDADPEIERIIAEREGKRTSKRRSLKRKDKSGDDELGSDESGS

Query:  DSREKKRGRSKRRSRRRESEDSDDSRRKRRKEKRRKIEDSSDDDGEKVKRHHRKSRKEKRRRRSHRYSDDSDSDTSEESHGKHKHKSKRTV-LTDSEASS
        DSREKKRGRSKRRSRRRES DSDDSRRKRRKEK RK +DSS D+GE +KR HRKSRKEKRRRRSHRYSDDSDSDTSEESH +HKHKS++   LTDSE SS
Subjt:  DSREKKRGRSKRRSRRRESEDSDDSRRKRRKEKRRKIEDSSDDDGEKVKRHHRKSRKEKRRRRSHRYSDDSDSDTSEESHGKHKHKSKRTV-LTDSEASS

Query:  SDDTRGRARKRSEKRSRRSRKHRREDDE
        S DTRGRARKRSEK   RSRKHR E+DE
Subjt:  SDDTRGRARKRSEKRSRRSRKHRREDDE

A0A6J1JHW4 CAX-interacting protein 4

5.3e-123

84.15

Show/hide

Query:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDSGKNSAQQNTAASEPDAENAYASFQGLLALARITGSNATEVRGACKRCGRVGHLSFQ
        MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDD+ K+SAQQNTA+SEP+AENAYASFQGLLALARITGSNA EVRGACKRCGRVGHLSFQ
Subjt:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDSGKNSAQQNTAASEPDAENAYASFQGLLALARITGSNATEVRGACKRCGRVGHLSFQ

Query:  CRNFLSV---KEKDTEGVQADVMSELDKLKGNMGKGNGKGAVDSDGESEEEESESSDSDADPEIERIIAEREGKRTSKRRSLKRKDKSGDDELGSDESGS
        CRNFLSV   KEKD E +QADVMSELDKLKGN+GKGNGKGAV+SD ESEEEESESSDSDAD EIERIIAEREGKRTSK+RSLKRK     D+L  D SGS
Subjt:  CRNFLSV---KEKDTEGVQADVMSELDKLKGNMGKGNGKGAVDSDGESEEEESESSDSDADPEIERIIAEREGKRTSKRRSLKRKDKSGDDELGSDESGS

Query:  DSREKKRGRSKRRSRRRESEDSDDSRRKRRKEKRRKIEDSSDDDGEKVKRHHRKSRKEKRRRRSHRYSDDSDSDTSEESHGKHKHKSKRTV-LTDSEASS
        DSREKKRGRSKRRSRRRES DSDD+RRKRRKEK RK +DSS D+GEK+KR HRKSRKEKRRRRSHRYSDDSDSDTSEESH +HK K ++   LTDS+ SS
Subjt:  DSREKKRGRSKRRSRRRESEDSDDSRRKRRKEKRRKIEDSSDDDGEKVKRHHRKSRKEKRRRRSHRYSDDSDSDTSEESHGKHKHKSKRTV-LTDSEASS

Query:  SDDTRGRARKRSEKRSRRSRKHRREDDE
        SDD RGRARKRSEK   RSRKHR E+DE
Subjt:  SDDTRGRARKRSEKRSRRSRKHRREDDE

SwissProt top hits

e value

%identity

Alignment

Q84Y18 CAX-interacting protein 4

3.3e-66

55.13

Show/hide

Query:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDSGKNSAQQNTAASEPDAENAYASFQGLLALARITGSNATEVRGACKRCGRVGHLSFQ
        MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAP   +  K + Q+       D EN+YASFQGLLALARITGSN  E RG+CK+CGRVGHL+FQ
Subjt:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDSGKNSAQQNTAASEPDAENAYASFQGLLALARITGSNATEVRGACKRCGRVGHLSFQ

Query:  CRNFLSV---KEKDTEGVQADVMSELDKLKGNMGKGNGKGAVDSDGESEEEESESSDSDADPEIERIIAEREGKR-----TSKRRSLKRKDKSGDDELGS
        CRNFLS    KEKD   ++A V+S L+K++    +G GKG V+     EEEESESSDSD D E+ERIIAER GK+       K  S+++K K   DE  S
Subjt:  CRNFLSV---KEKDTEGVQADVMSELDKLKGNMGKGNGKGAVDSDGESEEEESESSDSDADPEIERIIAEREGKR-----TSKRRSLKRKDKSGDDELGS

Query:  DESGSDSREKKRGRSKRRSRRR----ESEDSDDSRRKRRKEKR---RKIEDSSDDDGEKVKRHHRKSRKEKRRRRSHR-YSDDSDSDTSEESHGKHKHKS
        D    D + ++R   KR S +R    ESED ++ R KRRKE+R   R  +DS + + E  +R  RKSRKEKRRRRS R +SDDSDS++SE+   + K ++
Subjt:  DESGSDSREKKRGRSKRRSRRR----ESEDSDDSRRKRRKEKR---RKIEDSSDDDGEKVKRHHRKSRKEKRRRRSHR-YSDDSDSDTSEESHGKHKHKS

Query:  KRTVLTDSEASSSDDTRGR----ARKRSEKRSRRSRKHRRE
        K    +DSEA+ S D   R    + KRSEK+SR+ R HR+E
Subjt:  KRTVLTDSEASSSDDTRGR----ARKRSEKRSRRSRKHRRE

Arabidopsis top hits

e value

%identity

Alignment

AT2G28910.1 CAX interacting protein 4

2.4e-67

55.13

Show/hide

Query:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDSGKNSAQQNTAASEPDAENAYASFQGLLALARITGSNATEVRGACKRCGRVGHLSFQ
        MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAP   +  K + Q+       D EN+YASFQGLLALARITGSN  E RG+CK+CGRVGHL+FQ
Subjt:  MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDSGKNSAQQNTAASEPDAENAYASFQGLLALARITGSNATEVRGACKRCGRVGHLSFQ

Query:  CRNFLSV---KEKDTEGVQADVMSELDKLKGNMGKGNGKGAVDSDGESEEEESESSDSDADPEIERIIAEREGKR-----TSKRRSLKRKDKSGDDELGS
        CRNFLS    KEKD   ++A V+S L+K++    +G GKG V+     EEEESESSDSD D E+ERIIAER GK+       K  S+++K K   DE  S
Subjt:  CRNFLSV---KEKDTEGVQADVMSELDKLKGNMGKGNGKGAVDSDGESEEEESESSDSDADPEIERIIAEREGKR-----TSKRRSLKRKDKSGDDELGS

Query:  DESGSDSREKKRGRSKRRSRRR----ESEDSDDSRRKRRKEKR---RKIEDSSDDDGEKVKRHHRKSRKEKRRRRSHR-YSDDSDSDTSEESHGKHKHKS
        D    D + ++R   KR S +R    ESED ++ R KRRKE+R   R  +DS + + E  +R  RKSRKEKRRRRS R +SDDSDS++SE+   + K ++
Subjt:  DESGSDSREKKRGRSKRRSRRR----ESEDSDDSRRKRRKEKR---RKIEDSSDDDGEKVKRHHRKSRKEKRRRRSHR-YSDDSDSDTSEESHGKHKHKS

Query:  KRTVLTDSEASSSDDTRGR----ARKRSEKRSRRSRKHRRE
        K    +DSEA+ S D   R    + KRSEK+SR+ R HR+E
Subjt:  KRTVLTDSEASSSDDTRGR----ARKRSEKRSRRSRKHRRE

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCCGGCCACAGCTGGAAGAGTTCGCATGCCCGCGAACAATAGGGTCCACAGCAGTGCTGCCCTTCAAACGCACGGTATATGGCAGAGTGCAATTGGGTATGACCCATA
TGCACCAAACAAGGACGATAGCGGCAAGAATTCGGCACAACAAAACACGGCTGCCTCGGAGCCAGATGCCGAGAACGCCTATGCAAGCTTTCAAGGTCTGCTTGCACTTG
CTCGTATAACTGGTTCCAATGCCACCGAGGTTCGTGGTGCTTGCAAAAGATGTGGGCGTGTTGGACACCTTAGTTTTCAGTGCAGGAATTTCTTGAGTGTTAAGGAGAAA
GACACAGAAGGCGTCCAGGCCGATGTTATGTCCGAGCTGGATAAATTGAAAGGAAATATGGGTAAGGGGAATGGAAAAGGTGCAGTTGACAGTGATGGGGAGAGTGAGGA
GGAAGAGAGTGAAAGTTCTGACTCCGATGCTGATCCAGAGATTGAAAGGATTATTGCTGAAAGGGAAGGGAAAAGAACTAGTAAGAGAAGATCATTGAAAAGAAAGGATA
AATCGGGCGATGATGAGTTGGGTTCAGATGAGTCGGGTTCAGATTCAAGAGAGAAGAAGCGTGGGAGGTCAAAAAGGAGGAGCAGAAGAAGAGAATCTGAGGATTCAGAT
GACAGTAGAAGGAAGAGGAGAAAGGAGAAGCGCAGGAAAATAGAAGATTCATCGGATGACGATGGTGAAAAAGTCAAGCGACATCATAGGAAGAGTAGAAAAGAGAAGAG
AAGGAGAAGAAGCCATCGTTATTCCGATGACTCTGATTCTGATACATCTGAGGAATCTCATGGAAAGCACAAACACAAGAGTAAGAGGACTGTGTTAACTGATTCTGAAG
CTAGCAGCTCTGATGATACAAGGGGCAGGGCAAGGAAGCGTTCTGAGAAGAGGAGCAGGAGGAGCAGGAAACATCGACGCGAGGACGATGAATAG

mRNA sequence

Show/hide mRNA sequence

TAGGAATAACATTTTGAATTTATTGTTATTTTATTAAAAGGTAAACAAAAAACCCCAACTTCTCTGCACAGCCGACCCTTTCGCACACATCTCTTTCTCAACCTCTTCAT
CTCTTTCTCTGCTGATCTGTTTTAAAGAAAAGTTCTTTGAAACCTATATTCTCTACTATTCATCTTCGACGACTCTTAGACGGTAAAAAAGGTCGATTAGTTTGCTCTTT
CGTCGGTGTTCGATCCCCAAGCCTTAAGATGCCGGCCACAGCTGGAAGAGTTCGCATGCCCGCGAACAATAGGGTCCACAGCAGTGCTGCCCTTCAAACGCACGGTATAT
GGCAGAGTGCAATTGGGTATGACCCATATGCACCAAACAAGGACGATAGCGGCAAGAATTCGGCACAACAAAACACGGCTGCCTCGGAGCCAGATGCCGAGAACGCCTAT
GCAAGCTTTCAAGGTCTGCTTGCACTTGCTCGTATAACTGGTTCCAATGCCACCGAGGTTCGTGGTGCTTGCAAAAGATGTGGGCGTGTTGGACACCTTAGTTTTCAGTG
CAGGAATTTCTTGAGTGTTAAGGAGAAAGACACAGAAGGCGTCCAGGCCGATGTTATGTCCGAGCTGGATAAATTGAAAGGAAATATGGGTAAGGGGAATGGAAAAGGTG
CAGTTGACAGTGATGGGGAGAGTGAGGAGGAAGAGAGTGAAAGTTCTGACTCCGATGCTGATCCAGAGATTGAAAGGATTATTGCTGAAAGGGAAGGGAAAAGAACTAGT
AAGAGAAGATCATTGAAAAGAAAGGATAAATCGGGCGATGATGAGTTGGGTTCAGATGAGTCGGGTTCAGATTCAAGAGAGAAGAAGCGTGGGAGGTCAAAAAGGAGGAG
CAGAAGAAGAGAATCTGAGGATTCAGATGACAGTAGAAGGAAGAGGAGAAAGGAGAAGCGCAGGAAAATAGAAGATTCATCGGATGACGATGGTGAAAAAGTCAAGCGAC
ATCATAGGAAGAGTAGAAAAGAGAAGAGAAGGAGAAGAAGCCATCGTTATTCCGATGACTCTGATTCTGATACATCTGAGGAATCTCATGGAAAGCACAAACACAAGAGT
AAGAGGACTGTGTTAACTGATTCTGAAGCTAGCAGCTCTGATGATACAAGGGGCAGGGCAAGGAAGCGTTCTGAGAAGAGGAGCAGGAGGAGCAGGAAACATCGACGCGA
GGACGATGAATAGTCATATTGGGCCAAGTTATCGGGATCAGTTCCCTATATTGTTTAGCCGTAGGCCAAATCTTTTTGCAGAATTGATGTCAGATGATGGTGGGTCGTGA
TCCCGGGATTTACCAATAATAAACTCAGCTGTGGTCGGCTTTAGACAAGATAACGGTTGAATTTTATTGTGGTTATTGCATTCATATGTGTTGTTGGGCGTCCCTTTTTC
ATTGTGTGTGTATATTGCCTCTAATTTCCAGATCAAAACACTGAATAGTCGGTTTGGAGGTTAAAAGGAAATATAACTTCTATCTAGTGTGGTGTGATATCTTATAATTT
CTGAAATGAGATTCAAAACTTGTAATTTTATGGAATTCAATCCATCACAATATTTGATCGTATGATTAGCTATGTTTAGC

Protein sequence

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MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDSGKNSAQQNTAASEPDAENAYASFQGLLALARITGSNATEVRGACKRCGRVGHLSFQCRNFLSVKEK
DTEGVQADVMSELDKLKGNMGKGNGKGAVDSDGESEEEESESSDSDADPEIERIIAEREGKRTSKRRSLKRKDKSGDDELGSDESGSDSREKKRGRSKRRSRRRESEDSD
DSRRKRRKEKRRKIEDSSDDDGEKVKRHHRKSRKEKRRRRSHRYSDDSDSDTSEESHGKHKHKSKRTVLTDSEASSSDDTRGRARKRSEKRSRRSRKHRREDDE

Sed0011846 (gene) of Chayote v1 genome