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Sed0011882 (gene) of Chayote v1 genome

Gene IDSed0011882
OrganismSechium edule (Chayote v1)
DescriptionChalcone-flavonone isomerase family protein
Genome locationLG04:2472718..2475765
RNA-Seq ExpressionSed0011882
SyntenySed0011882
Gene Ontology termsGO:0009813 - flavonoid biosynthetic process (biological process)
GO:0016872 - intramolecular lyase activity (molecular function)
InterPro domainsIPR016087 - Chalcone isomerase
IPR016088 - Chalcone isomerase, 3-layer sandwich
IPR016089 - Chalcone isomerase, orthogonal bundle domain superfamily
IPR036298 - Chalcone isomerase superfamily
IPR044191 - Chalcone--flavonone isomerase 3-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600877.1 putative chalcone--flavonone isomerase 3, partial [Cucurbita argyrosperma subsp. sororia]1.3e-2975.82Show/hide
Query:  SFPQPQPVMGSEVEVIEDIAFPKQILKNEPLPLFGLGITDIEIHFLQIKLTAIGVYLEPAIVEHLQQWKGKAAKDLQEDDDFFEAIVSVNV
        SFP    +MGSEVEV+ DIAFP QI+KN+PL L G GI D+EIHFLQIK TAIGVYLEPAIVEHL+QWKGKAA+DL +DDDFFEAIVS  V
Subjt:  SFPQPQPVMGSEVEVIEDIAFPKQILKNEPLPLFGLGITDIEIHFLQIKLTAIGVYLEPAIVEHLQQWKGKAAKDLQEDDDFFEAIVSVNV

XP_008456952.1 PREDICTED: probable chalcone--flavonone isomerase 3 [Cucumis melo]1.1e-3175.53Show/hide
Query:  SINSFPQPQPVMGSEVEVIEDIAFPKQILKNEPLPLFGLGITDIEIHFLQIKLTAIGVYLEPAIVEHLQQWKGKAAKDLQEDDDFFEAIVSVNV
        S +SF  P P+MGSEVEV+ DIAFPKQI+K +PL L G G T+IEIHFL+IKLTAIGVYLEP++VEHLQQWKGKAAKDL EDDDFF+AIVS  V
Subjt:  SINSFPQPQPVMGSEVEVIEDIAFPKQILKNEPLPLFGLGITDIEIHFLQIKLTAIGVYLEPAIVEHLQQWKGKAAKDLQEDDDFFEAIVSVNV

XP_011655047.1 probable chalcone--flavonone isomerase 3 isoform X1 [Cucumis sativus]1.7e-3275.53Show/hide
Query:  SINSFPQPQPVMGSEVEVIEDIAFPKQILKNEPLPLFGLGITDIEIHFLQIKLTAIGVYLEPAIVEHLQQWKGKAAKDLQEDDDFFEAIVSVNV
        S +SFP P P+MGSEVEV+ DI FPKQI+K +PL L G G T+IEIHFL+IKLTAIGVYLEP+IVEHLQQWKGKAAKDL+EDDDFF+AI+S  V
Subjt:  SINSFPQPQPVMGSEVEVIEDIAFPKQILKNEPLPLFGLGITDIEIHFLQIKLTAIGVYLEPAIVEHLQQWKGKAAKDLQEDDDFFEAIVSVNV

XP_038891879.1 probable chalcone--flavonone isomerase 3 isoform X1 [Benincasa hispida]7.1e-3184.34Show/hide
Query:  MGSEVEVIEDIAFPKQILKNEPLPLFGLGITDIEIHFLQIKLTAIGVYLEPAIVEHLQQWKGKAAKDLQEDDDFFEAIVSVNV
        MGSEVEV+ DIAFPKQI+K  PL LFG GIT+IEIHFLQIKLTAIGVYLEP+IVEHLQQWKGKAAKDL+EDDDFF+AIVS  V
Subjt:  MGSEVEVIEDIAFPKQILKNEPLPLFGLGITDIEIHFLQIKLTAIGVYLEPAIVEHLQQWKGKAAKDLQEDDDFFEAIVSVNV

XP_038891881.1 probable chalcone--flavonone isomerase 3 isoform X2 [Benincasa hispida]8.3e-3274.26Show/hide
Query:  LLTNPLNSINSFPQPQPVMGSEVEVIEDIAFPKQILKNEPLPLFGLGITDIEIHFLQIKLTAIGVYLEPAIVEHLQQWKGKAAKDLQEDDDFFEAIVSVN
        LL     S  S  +   VMGSEVEV+ DIAFPKQI+K  PL LFG GIT+IEIHFLQIKLTAIGVYLEP+IVEHLQQWKGKAAKDL+EDDDFF+AIVS  
Subjt:  LLTNPLNSINSFPQPQPVMGSEVEVIEDIAFPKQILKNEPLPLFGLGITDIEIHFLQIKLTAIGVYLEPAIVEHLQQWKGKAAKDLQEDDDFFEAIVSVN

Query:  V
        V
Subjt:  V

TrEMBL top hitse value%identityAlignment
A0A0A0KPA3 Chalcone-flavonone isomerase family protein8.1e-3375.53Show/hide
Query:  SINSFPQPQPVMGSEVEVIEDIAFPKQILKNEPLPLFGLGITDIEIHFLQIKLTAIGVYLEPAIVEHLQQWKGKAAKDLQEDDDFFEAIVSVNV
        S +SFP P P+MGSEVEV+ DI FPKQI+K +PL L G G T+IEIHFL+IKLTAIGVYLEP+IVEHLQQWKGKAAKDL+EDDDFF+AI+S  V
Subjt:  SINSFPQPQPVMGSEVEVIEDIAFPKQILKNEPLPLFGLGITDIEIHFLQIKLTAIGVYLEPAIVEHLQQWKGKAAKDLQEDDDFFEAIVSVNV

A0A1S3C525 Chalcone-flavonone isomerase family protein5.3e-3275.53Show/hide
Query:  SINSFPQPQPVMGSEVEVIEDIAFPKQILKNEPLPLFGLGITDIEIHFLQIKLTAIGVYLEPAIVEHLQQWKGKAAKDLQEDDDFFEAIVSVNV
        S +SF  P P+MGSEVEV+ DIAFPKQI+K +PL L G G T+IEIHFL+IKLTAIGVYLEP++VEHLQQWKGKAAKDL EDDDFF+AIVS  V
Subjt:  SINSFPQPQPVMGSEVEVIEDIAFPKQILKNEPLPLFGLGITDIEIHFLQIKLTAIGVYLEPAIVEHLQQWKGKAAKDLQEDDDFFEAIVSVNV

A0A5D3BCV3 Chalcone-flavonone isomerase family protein1.6e-2878.31Show/hide
Query:  MGSEVEVIEDIAFPKQILKNEPLPLFGLGITDIEIHFLQIKLTAIGVYLEPAIVEHLQQWKGKAAKDLQEDDDFFEAIVSVNV
        +GSEVEV+ DIAFPKQI+K +PL L G G T+IEIHFL+IKLTAIGVYLEP++VEHLQQWKGKAAKDL EDDDFF+AIVS  V
Subjt:  MGSEVEVIEDIAFPKQILKNEPLPLFGLGITDIEIHFLQIKLTAIGVYLEPAIVEHLQQWKGKAAKDLQEDDDFFEAIVSVNV

A0A6J1CZ19 Chalcone-flavonone isomerase family protein3.2e-2980.23Show/hide
Query:  VMGSEVEVIEDIAFPKQIL--KNEPLPLFGLGITDIEIHFLQIKLTAIGVYLEPAIVEHLQQWKGKAAKDLQEDDDFFEAIVSVNV
        +MGSEVEV+E+IAFPKQI+    +PL L G GITDIEIHFLQIKLTAIGVYLEPAIVEHLQQWKGK AKDL+EDDDFF+AIVS  V
Subjt:  VMGSEVEVIEDIAFPKQIL--KNEPLPLFGLGITDIEIHFLQIKLTAIGVYLEPAIVEHLQQWKGKAAKDLQEDDDFFEAIVSVNV

A0A6J1FS51 Chalcone-flavonone isomerase family protein4.6e-2878.31Show/hide
Query:  MGSEVEVIEDIAFPKQILKNEPLPLFGLGITDIEIHFLQIKLTAIGVYLEPAIVEHLQQWKGKAAKDLQEDDDFFEAIVSVNV
        MGSEVEV+ DIAFP QI+KN+PL L G GI D+EIHFLQIK TAIGVYLEPAIVEHL+QWKG AA+DL +DDDFFEAIVS  V
Subjt:  MGSEVEVIEDIAFPKQILKNEPLPLFGLGITDIEIHFLQIKLTAIGVYLEPAIVEHLQQWKGKAAKDLQEDDDFFEAIVSVNV

SwissProt top hitse value%identityAlignment
A0A2U7XUE3 Chalcone isomerase-like protein 21.4e-2155.42Show/hide
Query:  MGSEVEVIEDIAFPKQILKNEPLPLFGLGITDIEIHFLQIKLTAIGVYLEPAIVEHLQQWKGKAAKDLQEDDDFFEAIVSVNV
        M + + ++ +I FP +I   +PL L G GITD+EIHFLQ+K TAIGVYL+  +V+HLQQWKGK   +L EDDDFF+A++S  V
Subjt:  MGSEVEVIEDIAFPKQILKNEPLPLFGLGITDIEIHFLQIKLTAIGVYLEPAIVEHLQQWKGKAAKDLQEDDDFFEAIVSVNV

O65333 Chalcone--flavanone isomerase4.3e-0742.53Show/hide
Query:  PVMGSEVEV-IEDIAFPKQIL---KNEPLPLFGLGITDIEIHFLQIKLTAIGVYLEPAIVEHLQ-QWKGKAAKDLQEDDDFFEAIVS
        P   S  EV +E + FP ++     ++ L L G G+  IEI    IK TAIGVYLE   V  L  +WKGK+A++L E  +FF  IV+
Subjt:  PVMGSEVEV-IEDIAFPKQIL---KNEPLPLFGLGITDIEIHFLQIKLTAIGVYLEPAIVEHLQ-QWKGKAAKDLQEDDDFFEAIVS

Q2PF16 Chalcone--flavanone isomerase4.8e-0637.21Show/hide
Query:  VMGSEVEV-IEDIAFPKQIL---KNEPLPLFGLGITDIEIHFLQIKLTAIGVYLE-PAIVEHLQQWKGKAAKDLQEDDDFFEAIVS
        ++ S  EV +E + FP  +     ++   L G G+  +EI    IK TAIGVYLE  A+     +WKGK A+++ +  DFF  IV+
Subjt:  VMGSEVEV-IEDIAFPKQIL---KNEPLPLFGLGITDIEIHFLQIKLTAIGVYLE-PAIVEHLQQWKGKAAKDLQEDDDFFEAIVS

Q45QI7 Chalcone--flavanone isomerase4.8e-0642.86Show/hide
Query:  IEDIAFPKQIL---KNEPLPLFGLGITDIEIHFLQIKLTAIGVYLEPAIVEHLQ-QWKGKAAKDLQEDDDFFEAIVS
        IE   FP  +     ++P  L G G   +EI    IK TAIGVYLE + +  L  +WKGK A++L +  DFF  IVS
Subjt:  IEDIAFPKQIL---KNEPLPLFGLGITDIEIHFLQIKLTAIGVYLEPAIVEHLQ-QWKGKAAKDLQEDDDFFEAIVS

Q8VZW3 Probable chalcone--flavanone isomerase 31.4e-2155.95Show/hide
Query:  MGSEVEVIEDIAFPKQILKNEPLPLFGLGITDIEIHFLQIKLTAIGVYLEPAIVE-HLQQWKGKAAKDLQEDDDFFEAIVSVNV
        MG+E+ ++ ++ FP QI+ ++PL L G GITDIEIHFLQ+K TAIGVYL+P+ V+ HL  WKGK  K+L  DDDFF+A+ S  +
Subjt:  MGSEVEVIEDIAFPKQILKNEPLPLFGLGITDIEIHFLQIKLTAIGVYLEPAIVE-HLQQWKGKAAKDLQEDDDFFEAIVSVNV

Arabidopsis top hitse value%identityAlignment
AT5G05270.1 Chalcone-flavanone isomerase family protein9.9e-2355.95Show/hide
Query:  MGSEVEVIEDIAFPKQILKNEPLPLFGLGITDIEIHFLQIKLTAIGVYLEPAIVE-HLQQWKGKAAKDLQEDDDFFEAIVSVNV
        MG+E+ ++ ++ FP QI+ ++PL L G GITDIEIHFLQ+K TAIGVYL+P+ V+ HL  WKGK  K+L  DDDFF+A+ S  +
Subjt:  MGSEVEVIEDIAFPKQILKNEPLPLFGLGITDIEIHFLQIKLTAIGVYLEPAIVE-HLQQWKGKAAKDLQEDDDFFEAIVSVNV

AT5G05270.2 Chalcone-flavanone isomerase family protein9.9e-2355.95Show/hide
Query:  MGSEVEVIEDIAFPKQILKNEPLPLFGLGITDIEIHFLQIKLTAIGVYLEPAIVE-HLQQWKGKAAKDLQEDDDFFEAIVSVNV
        MG+E+ ++ ++ FP QI+ ++PL L G GITDIEIHFLQ+K TAIGVYL+P+ V+ HL  WKGK  K+L  DDDFF+A+ S  +
Subjt:  MGSEVEVIEDIAFPKQILKNEPLPLFGLGITDIEIHFLQIKLTAIGVYLEPAIVE-HLQQWKGKAAKDLQEDDDFFEAIVSVNV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTTGCTTACCAATCCCCTAAACTCCATCAATTCATTTCCGCAACCGCAACCAGTAATGGGGAGTGAAGTGGAGGTGATTGAAGACATTGCGTTCCCTAAGCAGAT
CCTTAAGAACGAACCCTTGCCTCTCTTCGGTCTCGGAATCACAGACATTGAGATTCATTTTCTGCAAATAAAGTTGACGGCCATTGGAGTTTATTTGGAGCCTGCAATTG
TGGAGCATTTGCAGCAATGGAAGGGAAAAGCAGCTAAGGACTTGCAGGAAGACGATGACTTCTTTGAGGCCATTGTTTCTGTTAATGTTATCCGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTTGCTTACCAATCCCCTAAACTCCATCAATTCATTTCCGCAACCGCAACCAGTAATGGGGAGTGAAGTGGAGGTGATTGAAGACATTGCGTTCCCTAAGCAGAT
CCTTAAGAACGAACCCTTGCCTCTCTTCGGTCTCGGAATCACAGACATTGAGATTCATTTTCTGCAAATAAAGTTGACGGCCATTGGAGTTTATTTGGAGCCTGCAATTG
TGGAGCATTTGCAGCAATGGAAGGGAAAAGCAGCTAAGGACTTGCAGGAAGACGATGACTTCTTTGAGGCCATTGTTTCTGTTAATGTTATCCGGTAA
Protein sequenceShow/hide protein sequence
MALLTNPLNSINSFPQPQPVMGSEVEVIEDIAFPKQILKNEPLPLFGLGITDIEIHFLQIKLTAIGVYLEPAIVEHLQQWKGKAAKDLQEDDDFFEAIVSVNVIR