; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0011892 (gene) of Chayote v1 genome

Gene IDSed0011892
OrganismSechium edule (Chayote v1)
DescriptionCalcium-binding EF-hand family protein
Genome locationLG03:1371487..1372316
RNA-Seq ExpressionSed0011892
SyntenySed0011892
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578574.1 putative calcium-binding protein CML46, partial [Cucurbita argyrosperma subsp. sororia]2.3e-3957.86Show/hide
Query:  ITLDFFRFHKLASWLYAFVSRKSSVSKTDKLDRPAKGSDRDGSEGLNREEMRLVMGKLGVPCSKESEESLPMFASAEEMSKLFEERPACAAEVKGAFDVF
        I +D FRF KL SWLYAF + K         +        +G E ++REEM+ VMG+LG+   +E+EESLP FAS EEM ++F++  A AAEVK AFDVF
Subjt:  ITLDFFRFHKLASWLYAFVSRKSSVSKTDKLDRPAKGSDRDGSEGLNREEMRLVMGKLGVPCSKESEESLPMFASAEEMSKLFEERPACAAEVKGAFDVF

Query:  DVNGDGFIDVGELQRVLCVLGLKEGEGEGVENCRRMIRKFDHNGDGNIDFDEFLNLMES
        DVN DGFID  ELQRVLCVLG K  EGE ++NCRRMI KFD N DG IDF EF+ LMES
Subjt:  DVNGDGFIDVGELQRVLCVLGLKEGEGEGVENCRRMIRKFDHNGDGNIDFDEFLNLMES

XP_022133625.1 probable calcium-binding protein CML45 [Momordica charantia]2.5e-4160.38Show/hide
Query:  ITLDFFRFHKLASWLYAFVSRKSSVSKTDKLDRPAKGSDRDGSEGLNREEMRLVMGKLGVPCSKESEESLPMFASAEEMSKLFEERPACAAEVKGAFDVF
        I +D   F KL SWL A     +S   +++   P   +  DG E ++REEM+ VMG LG+ C +E +ESLP+F S EE++KLFEER  C AEVK AFDVF
Subjt:  ITLDFFRFHKLASWLYAFVSRKSSVSKTDKLDRPAKGSDRDGSEGLNREEMRLVMGKLGVPCSKESEESLPMFASAEEMSKLFEERPACAAEVKGAFDVF

Query:  DVNGDGFIDVGELQRVLCVLGLKEGEGEGVENCRRMIRKFDHNGDGNIDFDEFLNLMES
        D NGDGFIDV ELQRVLCVLGLK  EGEGVENC+RMI+KFD N DG IDF+EF+ LMES
Subjt:  DVNGDGFIDVGELQRVLCVLGLKEGEGEGVENCRRMIRKFDHNGDGNIDFDEFLNLMES

XP_022939128.1 probable calcium-binding protein CML45 [Cucurbita moschata]1.0e-3960Show/hide
Query:  ITLDFFRFHKLASWLYAFVSRKSSVSKTDKLDRPAKGSDRD-GSEGLNREEMRLVMGKLGVPCSKESEESLPMFASAEEMSKLFEERPACAAEVKGAFDV
        I +D FRF KL SWLYAF + K     +      AK   RD G E ++REEM+ VMG+LG+   +E+EESLP FAS EEM ++F++  A AAEVK AFDV
Subjt:  ITLDFFRFHKLASWLYAFVSRKSSVSKTDKLDRPAKGSDRD-GSEGLNREEMRLVMGKLGVPCSKESEESLPMFASAEEMSKLFEERPACAAEVKGAFDV

Query:  FDVNGDGFIDVGELQRVLCVLGLKEGEGEGVENCRRMIRKFDHNGDGNIDFDEFLNLMES
        FDVN DGFID  ELQRVLCVLG K  EGE ++NCRRMI KFD N DG IDF EF+ LMES
Subjt:  FDVNGDGFIDVGELQRVLCVLGLKEGEGEGVENCRRMIRKFDHNGDGNIDFDEFLNLMES

XP_022993675.1 probable calcium-binding protein CML30 [Cucurbita maxima]2.7e-4059.12Show/hide
Query:  ITLDFFRFHKLASWLYAFVSRKSSVSKTDKLDRPAKGSDRDGSEGLNREEMRLVMGKLGVPCSKESEESLPMFASAEEMSKLFEERPACAAEVKGAFDVF
        I +D FRF KL SWLYAF S K         +       ++G E ++REEM+ VM +LG+   +E+EESLP FAS EEM K+F++  A AAEVK AFDVF
Subjt:  ITLDFFRFHKLASWLYAFVSRKSSVSKTDKLDRPAKGSDRDGSEGLNREEMRLVMGKLGVPCSKESEESLPMFASAEEMSKLFEERPACAAEVKGAFDVF

Query:  DVNGDGFIDVGELQRVLCVLGLKEGEGEGVENCRRMIRKFDHNGDGNIDFDEFLNLMES
        DVN DGFIDV ELQRVLCVLG K  EGE ++NCRRMI KFD N DG IDF EF+ LMES
Subjt:  DVNGDGFIDVGELQRVLCVLGLKEGEGEGVENCRRMIRKFDHNGDGNIDFDEFLNLMES

XP_038889669.1 probable calcium-binding protein CML46 [Benincasa hispida]8.5e-4257.06Show/hide
Query:  SLDTKTT---------ITLDFFRFHKLASWLYAFVSRKSSVSKTDKLDRPAKGSDRDGSEGL-NREEMRLVMGKLGVPCSKESEESLPMFASAEEMSKLF
        S+D KTT         I +DF RF KLASWLYAF + K    K       +K  +  G E L   EEM+ VMG LG+ C    EES+P+F S EE++++F
Subjt:  SLDTKTT---------ITLDFFRFHKLASWLYAFVSRKSSVSKTDKLDRPAKGSDRDGSEGL-NREEMRLVMGKLGVPCSKESEESLPMFASAEEMSKLF

Query:  EERPACAAEVKGAFDVFDVNGDGFIDVGELQRVLCVLGLKEGEGEGVENCRRMIRKFDHNGDGNIDFDEFLNLMESV
        +ER A   EVK AFDVFDVNGDGFID  ELQRV+CVLG K  EGE ++NC RMIRKFDHNGDG IDF+EFL LMESV
Subjt:  EERPACAAEVKGAFDVFDVNGDGFIDVGELQRVLCVLGLKEGEGEGVENCRRMIRKFDHNGDGNIDFDEFLNLMESV

TrEMBL top hitse value%identityAlignment
A0A1S3CAB3 probable calcium-binding protein CML308.0e-3852.27Show/hide
Query:  SLDTKTT---------ITLDFFRFHKLASWLYAFVSRKSSVSKTDKLDRPAKGSDRDGSEGLNREEMRLVMGKLGVPCSKESEESLPMFASAEEMSKLFE
        S+D K+T         I +DF RF  LASWL +F S K   S      +  + S  +    ++ EEM+ VMG LG+ CS+ S  S+P+F SAEE++++F+
Subjt:  SLDTKTT---------ITLDFFRFHKLASWLYAFVSRKSSVSKTDKLDRPAKGSDRDGSEGLNREEMRLVMGKLGVPCSKESEESLPMFASAEEMSKLFE

Query:  ERPACAAEVKGAFDVFDVNGDGFIDVGELQRVLCVLGLKEGEGEGVENCRRMIRKFDHNGDGNIDFDEFLNLMESV
        +  A AAEVK AFDVFDVN DGFIDV ELQRV+CVLG K  EGEG+ENC +MI KFD+N DG IDF+EF+ LME+V
Subjt:  ERPACAAEVKGAFDVFDVNGDGFIDVGELQRVLCVLGLKEGEGEGVENCRRMIRKFDHNGDGNIDFDEFLNLMESV

A0A5A7T9C9 Putative calcium-binding protein CML302.1e-3855.62Show/hide
Query:  ITLDFFRFHKLASWLYAFVSRKSSVSKTDKLDRPAKGSDRDGSEGLNREEMRLVMGKLGVPCSKESEESLPMFASAEEMSKLFEERPACAAEVKGAFDVF
        I +DF RF  LASWL +F S K   S      +  + S  +    ++ EEM+ VMG LG+ CS+ S  S+P+F SAEE++++F++  A AAEVK AFDVF
Subjt:  ITLDFFRFHKLASWLYAFVSRKSSVSKTDKLDRPAKGSDRDGSEGLNREEMRLVMGKLGVPCSKESEESLPMFASAEEMSKLFEERPACAAEVKGAFDVF

Query:  DVNGDGFIDVGELQRVLCVLGLKEGEGEGVENCRRMIRKFDHNGDGNIDFDEFLNLMESV
        DVNGDGFIDV ELQRV+CVLG K  EGEG+ENC +MI KFD+N DG IDF+EF+ LME+V
Subjt:  DVNGDGFIDVGELQRVLCVLGLKEGEGEGVENCRRMIRKFDHNGDGNIDFDEFLNLMESV

A0A6J1BVS4 probable calcium-binding protein CML451.2e-4160.38Show/hide
Query:  ITLDFFRFHKLASWLYAFVSRKSSVSKTDKLDRPAKGSDRDGSEGLNREEMRLVMGKLGVPCSKESEESLPMFASAEEMSKLFEERPACAAEVKGAFDVF
        I +D   F KL SWL A     +S   +++   P   +  DG E ++REEM+ VMG LG+ C +E +ESLP+F S EE++KLFEER  C AEVK AFDVF
Subjt:  ITLDFFRFHKLASWLYAFVSRKSSVSKTDKLDRPAKGSDRDGSEGLNREEMRLVMGKLGVPCSKESEESLPMFASAEEMSKLFEERPACAAEVKGAFDVF

Query:  DVNGDGFIDVGELQRVLCVLGLKEGEGEGVENCRRMIRKFDHNGDGNIDFDEFLNLMES
        D NGDGFIDV ELQRVLCVLGLK  EGEGVENC+RMI+KFD N DG IDF+EF+ LMES
Subjt:  DVNGDGFIDVGELQRVLCVLGLKEGEGEGVENCRRMIRKFDHNGDGNIDFDEFLNLMES

A0A6J1FKT4 probable calcium-binding protein CML455.0e-4060Show/hide
Query:  ITLDFFRFHKLASWLYAFVSRKSSVSKTDKLDRPAKGSDRD-GSEGLNREEMRLVMGKLGVPCSKESEESLPMFASAEEMSKLFEERPACAAEVKGAFDV
        I +D FRF KL SWLYAF + K     +      AK   RD G E ++REEM+ VMG+LG+   +E+EESLP FAS EEM ++F++  A AAEVK AFDV
Subjt:  ITLDFFRFHKLASWLYAFVSRKSSVSKTDKLDRPAKGSDRD-GSEGLNREEMRLVMGKLGVPCSKESEESLPMFASAEEMSKLFEERPACAAEVKGAFDV

Query:  FDVNGDGFIDVGELQRVLCVLGLKEGEGEGVENCRRMIRKFDHNGDGNIDFDEFLNLMES
        FDVN DGFID  ELQRVLCVLG K  EGE ++NCRRMI KFD N DG IDF EF+ LMES
Subjt:  FDVNGDGFIDVGELQRVLCVLGLKEGEGEGVENCRRMIRKFDHNGDGNIDFDEFLNLMES

A0A6J1JZ70 probable calcium-binding protein CML301.3e-4059.12Show/hide
Query:  ITLDFFRFHKLASWLYAFVSRKSSVSKTDKLDRPAKGSDRDGSEGLNREEMRLVMGKLGVPCSKESEESLPMFASAEEMSKLFEERPACAAEVKGAFDVF
        I +D FRF KL SWLYAF S K         +       ++G E ++REEM+ VM +LG+   +E+EESLP FAS EEM K+F++  A AAEVK AFDVF
Subjt:  ITLDFFRFHKLASWLYAFVSRKSSVSKTDKLDRPAKGSDRDGSEGLNREEMRLVMGKLGVPCSKESEESLPMFASAEEMSKLFEERPACAAEVKGAFDVF

Query:  DVNGDGFIDVGELQRVLCVLGLKEGEGEGVENCRRMIRKFDHNGDGNIDFDEFLNLMES
        DVN DGFIDV ELQRVLCVLG K  EGE ++NCRRMI KFD N DG IDF EF+ LMES
Subjt:  DVNGDGFIDVGELQRVLCVLGLKEGEGEGVENCRRMIRKFDHNGDGNIDFDEFLNLMES

SwissProt top hitse value%identityAlignment
Q0DZP5 Probable calcium-binding protein CML176.6e-1337.59Show/hide
Query:  DRDGSEGLNREEMRLVMGKLGVPCSKESEESLPMFASA--------EEMSKLFEE-----------RPAC---AAEVKGAFDVFDVNGDGFIDVGELQRV
        DRDG   + REE+   + +LG+P  +E   +      A        +E ++L+E              AC    A ++ AFDVFD NGDGFI V EL  V
Subjt:  DRDGSEGLNREEMRLVMGKLGVPCSKESEESLPMFASA--------EEMSKLFEE-----------RPAC---AAEVKGAFDVFDVNGDGFIDVGELQRV

Query:  LCVLGLKEGEGEGVENCRRMIRKFDHNGDGNIDFDEFLNLM
        L  LG+K  +G   E+C RMI + D +GDG +DF EF  +M
Subjt:  LCVLGLKEGEGEGVENCRRMIRKFDHNGDGNIDFDEFLNLM

Q0JC44 Probable calcium-binding protein CML223.5e-1435.37Show/hide
Query:  SRKSSVSKTD--KLDRPAKGSDRDGSEGLNREEMRLVMGKLGVPCSKESEESLPMFASA--------EEMSKLF----------------EERPACAAEV
        S+K    + D  +L R  +  DR+G   + REE+   +GKLG+P   +   ++     A        EE  +L+                EE      ++
Subjt:  SRKSSVSKTD--KLDRPAKGSDRDGSEGLNREEMRLVMGKLGVPCSKESEESLPMFASA--------EEMSKLF----------------EERPACAAEV

Query:  KGAFDVFDVNGDGFIDVGELQRVLCVLGLKEGEGEGVENCRRMIRKFDHNGDGNIDFDEFLNLM
        + AF VFD NGDG+I V EL  VL  LGLK  +G   E CRRMI + D +GDG +DF EFL +M
Subjt:  KGAFDVFDVNGDGFIDVGELQRVLCVLGLKEGEGEGVENCRRMIRKFDHNGDGNIDFDEFLNLM

Q93Z27 Probable calcium-binding protein CML461.6e-2243.11Show/hide
Query:  LDFFRFHKLA----SWLYAFVSRKSSVSKTDKLDRPAKGSDR------DGSEGLNREEMRLVMGKLGVPCSKESEESLPMFASAEEMSKLFEERPACAAE
        + FFR+   A    S  +  V  +  VS+    D   + S +      D  +GL RE++ +VM  LG+   +E+ E L    S++E+S LFEE+     E
Subjt:  LDFFRFHKLA----SWLYAFVSRKSSVSKTDKLDRPAKGSDR------DGSEGLNREEMRLVMGKLGVPCSKESEESLPMFASAEEMSKLFEERPACAAE

Query:  VKGAFDVFDVNGDGFIDVGELQRVLCVLGLKEGEGEGVENCRRMIRKFDHNGDGNIDFDEFLNLMES
        VK AFDVFD N DGFID  +LQRVL +LGLK  +G  +ENCRRMIR FD + DG IDF  F+  ME+
Subjt:  VKGAFDVFDVNGDGFIDVGELQRVLCVLGLKEGEGEGVENCRRMIRKFDHNGDGNIDFDEFLNLMES

Q9LNE7 Calmodulin-like protein 72.1e-1144.16Show/hide
Query:  LFEERPACAAEVKGAFDVFDVNGDGFIDVGELQRVLCVLGLKEGEGEGVENCRRMIRKFDHNGDGNIDFDEFLNLME
        + +E      ++K AF+VFD NGDGFI V EL+ VL  LGLK  +G+ +++C++MI+K D +GDG +++ EF  +M+
Subjt:  LFEERPACAAEVKGAFDVFDVNGDGFIDVGELQRVLCVLGLKEGEGEGVENCRRMIRKFDHNGDGNIDFDEFLNLME

Q9MBG5 Probable calcium-binding protein CML451.1e-2049.59Show/hide
Query:  DRDGSEGLNREEMRLVMGKLGVPCSKESEESLPMFASAEEMSKLFEERPACAAEVKGAFDVFDVNGDGFIDVGELQRVLCVLGLKEGEGEGVENCRRMIR
        D D    ++REE  +VM  LG+     +++ L    SA+E+S LFEE+ A   EVK AFDVFD N DGFID  ELQRVL +LG K  +G  ++NC  MIR
Subjt:  DRDGSEGLNREEMRLVMGKLGVPCSKESEESLPMFASAEEMSKLFEERPACAAEVKGAFDVFDVNGDGFIDVGELQRVLCVLGLKEGEGEGVENCRRMIR

Query:  KFDHNGDGNIDFDEFLNLMES
          D N DG IDF+EF+  ME+
Subjt:  KFDHNGDGNIDFDEFLNLMES

Arabidopsis top hitse value%identityAlignment
AT1G05990.1 EF hand calcium-binding protein family1.5e-1244.16Show/hide
Query:  LFEERPACAAEVKGAFDVFDVNGDGFIDVGELQRVLCVLGLKEGEGEGVENCRRMIRKFDHNGDGNIDFDEFLNLME
        + +E      ++K AF+VFD NGDGFI V EL+ VL  LGLK  +G+ +++C++MI+K D +GDG +++ EF  +M+
Subjt:  LFEERPACAAEVKGAFDVFDVNGDGFIDVGELQRVLCVLGLKEGEGEGVENCRRMIRKFDHNGDGNIDFDEFLNLME

AT2G43290.1 Calcium-binding EF-hand family protein9.8e-1246.27Show/hide
Query:  EVKGAFDVFDVNGDGFIDVGELQRVLCVLGLKEGEGEGVENCRRMIRKFDHNGDGNIDFDEFLNLME
        ++K AF+VFD +GDGFI V EL+ V+  LGLK  +G+ ++ C++MI + D +GDG +++ EFL +M+
Subjt:  EVKGAFDVFDVNGDGFIDVGELQRVLCVLGLKEGEGEGVENCRRMIRKFDHNGDGNIDFDEFLNLME

AT3G29000.1 Calcium-binding EF-hand family protein8.0e-2249.59Show/hide
Query:  DRDGSEGLNREEMRLVMGKLGVPCSKESEESLPMFASAEEMSKLFEERPACAAEVKGAFDVFDVNGDGFIDVGELQRVLCVLGLKEGEGEGVENCRRMIR
        D D    ++REE  +VM  LG+     +++ L    SA+E+S LFEE+ A   EVK AFDVFD N DGFID  ELQRVL +LG K  +G  ++NC  MIR
Subjt:  DRDGSEGLNREEMRLVMGKLGVPCSKESEESLPMFASAEEMSKLFEERPACAAEVKGAFDVFDVNGDGFIDVGELQRVLCVLGLKEGEGEGVENCRRMIR

Query:  KFDHNGDGNIDFDEFLNLMES
          D N DG IDF+EF+  ME+
Subjt:  KFDHNGDGNIDFDEFLNLMES

AT3G59440.1 Calcium-binding EF-hand family protein1.3e-1147.06Show/hide
Query:  EVKGAFDVFDVNGDGFIDVGELQRVLCVLGLKEGEGEGVENCRRMIRKFDHNGDGNIDFDEFLNLMES
        +++ AF+VFD +GDGFI V EL  V+  LGLK  +G+ +E C+ MI + D +GDG +++ EFL +M+S
Subjt:  EVKGAFDVFDVNGDGFIDVGELQRVLCVLGLKEGEGEGVENCRRMIRKFDHNGDGNIDFDEFLNLMES

AT5G39670.1 Calcium-binding EF-hand family protein1.1e-2343.11Show/hide
Query:  LDFFRFHKLA----SWLYAFVSRKSSVSKTDKLDRPAKGSDR------DGSEGLNREEMRLVMGKLGVPCSKESEESLPMFASAEEMSKLFEERPACAAE
        + FFR+   A    S  +  V  +  VS+    D   + S +      D  +GL RE++ +VM  LG+   +E+ E L    S++E+S LFEE+     E
Subjt:  LDFFRFHKLA----SWLYAFVSRKSSVSKTDKLDRPAKGSDR------DGSEGLNREEMRLVMGKLGVPCSKESEESLPMFASAEEMSKLFEERPACAAE

Query:  VKGAFDVFDVNGDGFIDVGELQRVLCVLGLKEGEGEGVENCRRMIRKFDHNGDGNIDFDEFLNLMES
        VK AFDVFD N DGFID  +LQRVL +LGLK  +G  +ENCRRMIR FD + DG IDF  F+  ME+
Subjt:  VKGAFDVFDVNGDGFIDVGELQRVLCVLGLKEGEGEGVENCRRMIRKFDHNGDGNIDFDEFLNLMES


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCCAGCCTCGACACCAAAACAACAATCACCCTCGATTTCTTTCGATTCCACAAACTCGCCTCGTGGCTCTACGCATTCGTCTCCCGAAAGTCCTCGGTTTCGAA
AACCGACAAACTGGATAGACCGGCAAAGGGCAGCGACAGAGACGGTAGCGAGGGGCTGAACAGAGAGGAGATGAGATTGGTGATGGGGAAATTGGGGGTTCCTTGTAGCA
AGGAATCCGAGGAATCGCTTCCTATGTTTGCGTCCGCTGAAGAGATGTCGAAACTGTTCGAGGAAAGGCCGGCGTGTGCGGCCGAGGTGAAGGGAGCTTTCGATGTGTTC
GATGTGAATGGCGACGGGTTCATCGATGTCGGGGAGTTGCAGCGAGTGCTCTGTGTTTTGGGGTTGAAGGAAGGGGAAGGGGAAGGGGTTGAGAATTGTAGGAGGATGAT
TCGGAAGTTTGATCACAATGGCGATGGCAACATTGATTTTGATGAGTTTCTCAACTTGATGGAGTCTGTGAATTGA
mRNA sequenceShow/hide mRNA sequence
CCCAAATCATCTCAACACAAACACACAAAAAAAAAACATTACTACCATCGAATTGAATCCTTCCATTTCTTCCAAAAACCAAATGGATTCCAGCCTCGACACCAAAACAA
CAATCACCCTCGATTTCTTTCGATTCCACAAACTCGCCTCGTGGCTCTACGCATTCGTCTCCCGAAAGTCCTCGGTTTCGAAAACCGACAAACTGGATAGACCGGCAAAG
GGCAGCGACAGAGACGGTAGCGAGGGGCTGAACAGAGAGGAGATGAGATTGGTGATGGGGAAATTGGGGGTTCCTTGTAGCAAGGAATCCGAGGAATCGCTTCCTATGTT
TGCGTCCGCTGAAGAGATGTCGAAACTGTTCGAGGAAAGGCCGGCGTGTGCGGCCGAGGTGAAGGGAGCTTTCGATGTGTTCGATGTGAATGGCGACGGGTTCATCGATG
TCGGGGAGTTGCAGCGAGTGCTCTGTGTTTTGGGGTTGAAGGAAGGGGAAGGGGAAGGGGTTGAGAATTGTAGGAGGATGATTCGGAAGTTTGATCACAATGGCGATGGC
AACATTGATTTTGATGAGTTTCTCAACTTGATGGAGTCTGTGAATTGAAGTTATTACTATTTTTTTTTTAATTCGTTTATTTGTTTTTTTAATAATTATTGTATTGTGGT
CGAAATTGAAGCCTTTTGCCCCTTCGATCTTGTTTTGTGCATAAGCAAAATCGAGATAGTTTCTTGTTTTTTGGGATAAATGGAATTGAAATTTTGGCCCATCTTATATT
TATAACTTTGTTATTTTATATTTATATCTTTTTTAATTCAATAACAACACAGTTAGTATA
Protein sequenceShow/hide protein sequence
MDSSLDTKTTITLDFFRFHKLASWLYAFVSRKSSVSKTDKLDRPAKGSDRDGSEGLNREEMRLVMGKLGVPCSKESEESLPMFASAEEMSKLFEERPACAAEVKGAFDVF
DVNGDGFIDVGELQRVLCVLGLKEGEGEGVENCRRMIRKFDHNGDGNIDFDEFLNLMESVN