; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0011896 (gene) of Chayote v1 genome

Gene IDSed0011896
OrganismSechium edule (Chayote v1)
DescriptionSignal transduction histidine kinase
Genome locationLG11:4204490..4204819
RNA-Seq ExpressionSed0011896
SyntenySed0011896
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056096.1 hypothetical protein E6C27_scaffold323G00580 [Cucumis melo var. makuwa]2.7e-1756.76Show/hide
Query:  MKFLEVAGAANGGYQ--YEKLYNGGKMS------VRRRRGWLRKIVPKRGMKGFRLYRRMRF-SSFSLKPSFLMLLLSRRVKEIVKRLK-VEDVCPNIMF
        M  LE+AG     ++  YEKL + G  +      + RRR W++K++ KRGMKGFRLYR  R  SSF LK SFLM  LSRR++EIV R+K VEDVCPNI+F
Subjt:  MKFLEVAGAANGGYQ--YEKLYNGGKMS------VRRRRGWLRKIVPKRGMKGFRLYRRMRF-SSFSLKPSFLMLLLSRRVKEIVKRLK-VEDVCPNIMF

Query:  STHWGLPVLSH
        ST WGLPVLS+
Subjt:  STHWGLPVLSH

KAG6599155.1 Transmembrane protein 184A, partial [Cucurbita argyrosperma subsp. sororia]5.5e-1854.13Show/hide
Query:  MKFLEVAGAANGGY-QYEKLYNGGKMSVRRRRGWLRKIVPKRGMKGFRLYRRMRFSSFSLKPSFLMLLLSRRVKEIVKRLKVEDVCPNIMFSTHWGLPVL
        M  LE AG     + QYEKL+      V+ RR W++K + KRG KGFRLYR  R  SF LK SFL +L+SRR++EIV R+KVEDVC N++F T WGLP L
Subjt:  MKFLEVAGAANGGY-QYEKLYNGGKMSVRRRRGWLRKIVPKRGMKGFRLYRRMRFSSFSLKPSFLMLLLSRRVKEIVKRLKVEDVCPNIMFSTHWGLPVL

Query:  SHSSSTCIL
        S++SS+ +L
Subjt:  SHSSSTCIL

KGN61039.1 hypothetical protein Csa_021124 [Cucumis sativus]4.9e-1960.75Show/hide
Query:  MKFLEVAGAANGGYQ--YEKLYNGG--KMSVRRRRGWLRKIVPKRGMKGFRLYRRMRF-SSFSLKPSFLMLLLSRRVKEIVKRLK-VEDVCPNIMFSTHW
        M  LE+AG     ++  YEKL +GG  ++ V RRR W++K++ KRGMKGFRLYR  R  SSF LK SFLM  LSRR++EIV R+K VEDVCPNI+FST W
Subjt:  MKFLEVAGAANGGYQ--YEKLYNGG--KMSVRRRRGWLRKIVPKRGMKGFRLYRRMRF-SSFSLKPSFLMLLLSRRVKEIVKRLK-VEDVCPNIMFSTHW

Query:  GLPVLSH
        GLPVLS+
Subjt:  GLPVLSH

OAY43889.1 hypothetical protein MANES_08G105911v8 [Manihot esculenta]1.8e-0842.55Show/hide
Query:  YQYEKLYNGG-KMSVRRRRGWLRKIVPKRGMKGFRLYRRMRFSSFSLKPSFLMLLLSRRVKEIVKRLKVEDVCPNIMFSTHWGLPVLSHSSSTC
        Y+YEKL +   K++  RRR W++K+    G+KG RL R  + +  +L    L   ++R   +I+ R+K+ED+ PNI+FST  GLPVLSH S  C
Subjt:  YQYEKLYNGG-KMSVRRRRGWLRKIVPKRGMKGFRLYRRMRFSSFSLKPSFLMLLLSRRVKEIVKRLKVEDVCPNIMFSTHWGLPVLSHSSSTC

PRQ42565.1 hypothetical protein RchiOBHm_Chr3g0459041 [Rosa chinensis]1.0e-0845.19Show/hide
Query:  MKFLEVAGAANGGYQYEKL-YNGGKMSVRRRRGWLRKIVPKRGMKGFRLYRRMRFSSFSLKPSFLMLLLSRRVKEIVKRLKVEDVCPNIMFSTHWGLPVL
        M F ++ G    G+QYEKL     KMS   R  W++K+  K  +KGFRL R  +F+            ++R   E+VKRLK + V PNI+FST WGLPVL
Subjt:  MKFLEVAGAANGGYQYEKL-YNGGKMSVRRRRGWLRKIVPKRGMKGFRLYRRMRFSSFSLKPSFLMLLLSRRVKEIVKRLKVEDVCPNIMFSTHWGLPVL

Query:  SHSS
        SHSS
Subjt:  SHSS

TrEMBL top hitse value%identityAlignment
A0A067JHB0 Uncharacterized protein1.9e-0838.32Show/hide
Query:  MKFLEVAGAANGGYQYEKLYNGGKMSVRRRR-GWLRKIVPKRGMKGFRLYRRMRFSSFSLKPSFLMLLLSRRVKEIVKRLKVEDVCPNIMFSTHWGLPVL
        M F ++    +  Y Y+KL +  +  VR RR  W++K+    G+KG RLYR  + +  +L    L   ++R   +I+ R+K++D+ PNI+FST  GLPVL
Subjt:  MKFLEVAGAANGGYQYEKLYNGGKMSVRRRR-GWLRKIVPKRGMKGFRLYRRMRFSSFSLKPSFLMLLLSRRVKEIVKRLKVEDVCPNIMFSTHWGLPVL

Query:  SHSSSTC
        SH S  C
Subjt:  SHSSSTC

A0A0A0LJ29 Uncharacterized protein2.4e-1960.75Show/hide
Query:  MKFLEVAGAANGGYQ--YEKLYNGG--KMSVRRRRGWLRKIVPKRGMKGFRLYRRMRF-SSFSLKPSFLMLLLSRRVKEIVKRLK-VEDVCPNIMFSTHW
        M  LE+AG     ++  YEKL +GG  ++ V RRR W++K++ KRGMKGFRLYR  R  SSF LK SFLM  LSRR++EIV R+K VEDVCPNI+FST W
Subjt:  MKFLEVAGAANGGYQ--YEKLYNGG--KMSVRRRRGWLRKIVPKRGMKGFRLYRRMRF-SSFSLKPSFLMLLLSRRVKEIVKRLK-VEDVCPNIMFSTHW

Query:  GLPVLSH
        GLPVLS+
Subjt:  GLPVLSH

A0A2C9VF51 Uncharacterized protein8.5e-0942.55Show/hide
Query:  YQYEKLYNGG-KMSVRRRRGWLRKIVPKRGMKGFRLYRRMRFSSFSLKPSFLMLLLSRRVKEIVKRLKVEDVCPNIMFSTHWGLPVLSHSSSTC
        Y+YEKL +   K++  RRR W++K+    G+KG RL R  + +  +L    L   ++R   +I+ R+K+ED+ PNI+FST  GLPVLSH S  C
Subjt:  YQYEKLYNGG-KMSVRRRRGWLRKIVPKRGMKGFRLYRRMRFSSFSLKPSFLMLLLSRRVKEIVKRLKVEDVCPNIMFSTHWGLPVLSHSSSTC

A0A2P6R7Z9 Uncharacterized protein5.0e-0945.19Show/hide
Query:  MKFLEVAGAANGGYQYEKL-YNGGKMSVRRRRGWLRKIVPKRGMKGFRLYRRMRFSSFSLKPSFLMLLLSRRVKEIVKRLKVEDVCPNIMFSTHWGLPVL
        M F ++ G    G+QYEKL     KMS   R  W++K+  K  +KGFRL R  +F+            ++R   E+VKRLK + V PNI+FST WGLPVL
Subjt:  MKFLEVAGAANGGYQYEKL-YNGGKMSVRRRRGWLRKIVPKRGMKGFRLYRRMRFSSFSLKPSFLMLLLSRRVKEIVKRLKVEDVCPNIMFSTHWGLPVL

Query:  SHSS
        SHSS
Subjt:  SHSS

A0A5D3BCS3 Uncharacterized protein1.3e-1756.76Show/hide
Query:  MKFLEVAGAANGGYQ--YEKLYNGGKMS------VRRRRGWLRKIVPKRGMKGFRLYRRMRF-SSFSLKPSFLMLLLSRRVKEIVKRLK-VEDVCPNIMF
        M  LE+AG     ++  YEKL + G  +      + RRR W++K++ KRGMKGFRLYR  R  SSF LK SFLM  LSRR++EIV R+K VEDVCPNI+F
Subjt:  MKFLEVAGAANGGYQ--YEKLYNGGKMS------VRRRRGWLRKIVPKRGMKGFRLYRRMRF-SSFSLKPSFLMLLLSRRVKEIVKRLK-VEDVCPNIMF

Query:  STHWGLPVLSH
        ST WGLPVLS+
Subjt:  STHWGLPVLSH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGTTCTTAGAGGTTGCTGGTGCTGCCAATGGAGGATATCAATACGAGAAGCTATACAACGGCGGTAAAATGTCGGTTAGGCGAAGACGGGGGTGGTTGAGGAAAAT
CGTACCGAAGAGAGGAATGAAGGGTTTTCGATTGTATCGTCGTATGAGGTTTTCGAGTTTTAGTTTGAAGCCATCTTTTTTGATGTTGTTGTTGTCAAGAAGAGTTAAAG
AGATTGTGAAGAGATTGAAGGTTGAAGATGTGTGTCCTAATATCATGTTCTCTACTCATTGGGGACTTCCTGTTTTATCTCATTCTTCTTCGACTTGTATACTTTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGTTCTTAGAGGTTGCTGGTGCTGCCAATGGAGGATATCAATACGAGAAGCTATACAACGGCGGTAAAATGTCGGTTAGGCGAAGACGGGGGTGGTTGAGGAAAAT
CGTACCGAAGAGAGGAATGAAGGGTTTTCGATTGTATCGTCGTATGAGGTTTTCGAGTTTTAGTTTGAAGCCATCTTTTTTGATGTTGTTGTTGTCAAGAAGAGTTAAAG
AGATTGTGAAGAGATTGAAGGTTGAAGATGTGTGTCCTAATATCATGTTCTCTACTCATTGGGGACTTCCTGTTTTATCTCATTCTTCTTCGACTTGTATACTTTTTTAA
Protein sequenceShow/hide protein sequence
MKFLEVAGAANGGYQYEKLYNGGKMSVRRRRGWLRKIVPKRGMKGFRLYRRMRFSSFSLKPSFLMLLLSRRVKEIVKRLKVEDVCPNIMFSTHWGLPVLSHSSSTCILF