; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0011920 (gene) of Chayote v1 genome

Gene IDSed0011920
OrganismSechium edule (Chayote v1)
Description40S ribosomal protein SA
Genome locationLG10:33613145..33616437
RNA-Seq ExpressionSed0011920
SyntenySed0011920
Gene Ontology termsGO:0000028 - ribosomal small subunit assembly (biological process)
GO:0002181 - cytoplasmic translation (biological process)
GO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001865 - Ribosomal protein S2
IPR005707 - Ribosomal protein S2, eukaryotic/archaeal
IPR018130 - Ribosomal protein S2, conserved site
IPR023591 - Ribosomal protein S2, flavodoxin-like domain superfamily
IPR027498 - Ribosomal protein S2, eukaryotic


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607580.1 40S ribosomal protein SA, partial [Cucurbita argyrosperma subsp. sororia]1.1e-15188.71Show/hide
Query:  MATGAAPPRHLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVSIENPQDIIVQSARPYGQRAVLKFAQHTGAH
        MATGAAPPR LSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQ+AARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TGAH
Subjt:  MATGAAPPRHLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVSIENPQDIIVQSARPYGQRAVLKFAQHTGAH

Query:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGYKWDV
        AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAG+KWDV
Subjt:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGYKWDV

Query:  MVDLFFYREPEETKEKDEDEALPPPDFGIADYGASALGASDQWTAQIADAQWGG------AAADAAAPPPASAVGWTQEPVGLAADEWDTAVAPPPPAPA
        MVDLFFYREPEE KEK+E+EALPPPDFGIADYGA+ L ASDQW+AQI DAQWG       AAA AAA PP S+V WT EP  LAAD WD AVAPP  APA
Subjt:  MVDLFFYREPEETKEKDEDEALPPPDFGIADYGASALGASDQWTAQIADAQWGG------AAADAAAPPPASAVGWTQEPVGLAADEWDTAVAPPPPAPA

Query:  VDGAAPPSDG
        VDGAAPPS+G
Subjt:  VDGAAPPSDG

XP_022932088.1 40S ribosomal protein SA-like [Cucurbita moschata]8.7e-15289Show/hide
Query:  MATGAAPPRHLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVSIENPQDIIVQSARPYGQRAVLKFAQHTGAH
        MATGAAPPR LSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQ+AARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TGAH
Subjt:  MATGAAPPRHLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVSIENPQDIIVQSARPYGQRAVLKFAQHTGAH

Query:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGYKWDV
        AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAG+KWDV
Subjt:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGYKWDV

Query:  MVDLFFYREPEETKEKDEDEALPPPDFGIADYGASALGASDQWTAQIADAQWGGA-----AADAAAPPPASAVGWTQEPVGLAADEWDTAVAPPPPAPAV
        MVDLFFYREPEE KEK+E+EALPPPDFGIADYGA+ L ASDQW+AQI DAQWG A     AA AAA PP S+V WT EP  LAAD WD AVAPP  APAV
Subjt:  MVDLFFYREPEETKEKDEDEALPPPDFGIADYGASALGASDQWTAQIADAQWGGA-----AADAAAPPPASAVGWTQEPVGLAADEWDTAVAPPPPAPAV

Query:  DGAAPPSDG
        DGAAPPS+G
Subjt:  DGAAPPSDG

XP_022972886.1 40S ribosomal protein SA-like [Cucurbita maxima]5.6e-15188.93Show/hide
Query:  MATGAAPPRHLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVSIENPQDIIVQSARPYGQRAVLKFAQHTGAH
        MATGAAPPR LSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQ+AARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TGAH
Subjt:  MATGAAPPRHLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVSIENPQDIIVQSARPYGQRAVLKFAQHTGAH

Query:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGYKWDV
        AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAG+KWDV
Subjt:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGYKWDV

Query:  MVDLFFYREPEETKEKDEDEALPPPDFGIADYGASALGASDQWTAQIADAQWGGA-----AADAAAPPPASAVGWTQEPVGLAADEWDTAVAPPPPAPAV
        MVDLFFYREPEE KEK+E+EALPPPDFGIADYGA+ L ASDQW+AQI DAQWG A     AA AAA PP S+V WT EP  LAAD WD AV+PP  APAV
Subjt:  MVDLFFYREPEETKEKDEDEALPPPDFGIADYGASALGASDQWTAQIADAQWGGA-----AADAAAPPPASAVGWTQEPVGLAADEWDTAVAPPPPAPAV

Query:  DGAAPPS
        DGAAPPS
Subjt:  DGAAPPS

XP_023525392.1 40S ribosomal protein SA-like [Cucurbita pepo subsp. pepo]2.5e-15187.86Show/hide
Query:  MATGAAPPRHLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVSIENPQDIIVQSARPYGQRAVLKFAQHTGAH
        MATGAAPPR LSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQ+AARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TGAH
Subjt:  MATGAAPPRHLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVSIENPQDIIVQSARPYGQRAVLKFAQHTGAH

Query:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGYKWDV
        AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAG+KWDV
Subjt:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGYKWDV

Query:  MVDLFFYREPEETKEKDEDEALPPPDFGIADYGASALGASDQWTAQIADAQWG---------GAAADAAAPPPASAVGWTQEPVGLAADEWDTAVAPPPP
        MVDLFFYREPEE KEK+E+EALPPPDFGIADYGA+ L ASDQW+AQI DAQWG          AAA AAA PP S+V WT EP  LAAD WD AVAPP  
Subjt:  MVDLFFYREPEETKEKDEDEALPPPDFGIADYGASALGASDQWTAQIADAQWG---------GAAADAAAPPPASAVGWTQEPVGLAADEWDTAVAPPPP

Query:  APAVDGAAPPSDG
        APAVDGAAPPS+G
Subjt:  APAVDGAAPPSDG

XP_038886558.1 40S ribosomal protein SA-like [Benincasa hispida]2.0e-14883.59Show/hide
Query:  MATGAAPPRHLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVSIENPQDIIVQSARPYGQRAVLKFAQHTGAH
        MATGAAPPR L+QKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKLQ+AARVIV IENPQDIIVQSARPYGQRAVLKFAQHTGAH
Subjt:  MATGAAPPRHLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVSIENPQDIIVQSARPYGQRAVLKFAQHTGAH

Query:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGYKWDV
        AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAG+KWDV
Subjt:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGYKWDV

Query:  MVDLFFYREPEETKEKDEDEALPPPDFGIADYGASALGASDQWTAQIADAQWG-GAAADAAAPPPASAVGWTQEPVGLAADEWDTAVAPPPPAPAVDGAA
        MVDLFFYREPEE KE +E+EALPPPDFGIADYGA+ L  +DQWTAQI DAQWG G A  AAA PPAS V W QEPV LAAD WD AV   PP PA DGA 
Subjt:  MVDLFFYREPEETKEKDEDEALPPPDFGIADYGASALGASDQWTAQIADAQWG-GAAADAAAPPPASAVGWTQEPVGLAADEWDTAVAPPPPAPAVDGAA

Query:  PPSDGAASPSDGAAPPSDGAAPPSTGDWF
                    AAPP     PPS+  WF
Subjt:  PPSDGAASPSDGAAPPSDGAAPPSTGDWF

TrEMBL top hitse value%identityAlignment
A0A5D3DUK0 40S ribosomal protein SA2.2e-14586.6Show/hide
Query:  MATGAAPPRHLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVSIENPQDIIVQSARPYGQRAVLKFAQHTGAH
        MATGAAPPR LSQKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKLQ+AARVIV IENPQDIIVQSARPYGQRAVLKFAQHTGAH
Subjt:  MATGAAPPRHLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVSIENPQDIIVQSARPYGQRAVLKFAQHTGAH

Query:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGYKWDV
        AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAG+KWDV
Subjt:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGYKWDV

Query:  MVDLFFYREPEETKEKDEDEALPPPDFGIADYGASALGASDQWTAQIADAQWGGAAADAAAPP----PASAVGWTQEPVGLAADEWDTAVAPPPPAPAVD
        MVDLFFYREPEE KE +E+EALPP DFGIADY A+ L ASDQWT+QI DAQWG  AADA  PP    PAS   W  EPV L AD WD A  PPPPA + D
Subjt:  MVDLFFYREPEETKEKDEDEALPPPDFGIADYGASALGASDQWTAQIADAQWGGAAADAAAPP----PASAVGWTQEPVGLAADEWDTAVAPPPPAPAVD

Query:  GAAPPS
        G AP S
Subjt:  GAAPPS

A0A6J1EC15 40S ribosomal protein SA1.4e-14788.16Show/hide
Query:  MATGAAPPRHLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVSIENPQDIIVQSARPYGQRAVLKFAQHTGAH
        MATGAAP R LSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL MAARVIV+IENPQDIIVQSARPYGQRAVLKFAQ+TG H
Subjt:  MATGAAPPRHLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVSIENPQDIIVQSARPYGQRAVLKFAQHTGAH

Query:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGYKWDV
        AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAG+KWDV
Subjt:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGYKWDV

Query:  MVDLFFYREPEETKEKDEDEALPPPDFGIADYGASALGASDQWTAQIADAQWGGA-AADAAAPPPASAVGWTQEPVGLAADEWDTAVAPPPPA-PAVDGA
        MVDLFFYREPEE KEK+E+EALPPPDFGIADYGA+ L ASDQW AQI+DAQWG A    A A P AS+V W  EPV LAA+EW+ AVAPPPPA PA DGA
Subjt:  MVDLFFYREPEETKEKDEDEALPPPDFGIADYGASALGASDQWTAQIADAQWGGA-AADAAAPPPASAVGWTQEPVGLAADEWDTAVAPPPPA-PAVDGA

Query:  APPS
        AP S
Subjt:  APPS

A0A6J1F0N2 40S ribosomal protein SA4.2e-15289Show/hide
Query:  MATGAAPPRHLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVSIENPQDIIVQSARPYGQRAVLKFAQHTGAH
        MATGAAPPR LSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQ+AARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TGAH
Subjt:  MATGAAPPRHLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVSIENPQDIIVQSARPYGQRAVLKFAQHTGAH

Query:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGYKWDV
        AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAG+KWDV
Subjt:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGYKWDV

Query:  MVDLFFYREPEETKEKDEDEALPPPDFGIADYGASALGASDQWTAQIADAQWGGA-----AADAAAPPPASAVGWTQEPVGLAADEWDTAVAPPPPAPAV
        MVDLFFYREPEE KEK+E+EALPPPDFGIADYGA+ L ASDQW+AQI DAQWG A     AA AAA PP S+V WT EP  LAAD WD AVAPP  APAV
Subjt:  MVDLFFYREPEETKEKDEDEALPPPDFGIADYGASALGASDQWTAQIADAQWGGA-----AADAAAPPPASAVGWTQEPVGLAADEWDTAVAPPPPAPAV

Query:  DGAAPPSDG
        DGAAPPS+G
Subjt:  DGAAPPSDG

A0A6J1I769 40S ribosomal protein SA2.7e-15188.93Show/hide
Query:  MATGAAPPRHLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVSIENPQDIIVQSARPYGQRAVLKFAQHTGAH
        MATGAAPPR LSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQ+AARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TGAH
Subjt:  MATGAAPPRHLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVSIENPQDIIVQSARPYGQRAVLKFAQHTGAH

Query:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGYKWDV
        AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAG+KWDV
Subjt:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGYKWDV

Query:  MVDLFFYREPEETKEKDEDEALPPPDFGIADYGASALGASDQWTAQIADAQWGGA-----AADAAAPPPASAVGWTQEPVGLAADEWDTAVAPPPPAPAV
        MVDLFFYREPEE KEK+E+EALPPPDFGIADYGA+ L ASDQW+AQI DAQWG A     AA AAA PP S+V WT EP  LAAD WD AV+PP  APAV
Subjt:  MVDLFFYREPEETKEKDEDEALPPPDFGIADYGASALGASDQWTAQIADAQWGGA-----AADAAAPPPASAVGWTQEPVGLAADEWDTAVAPPPPAPAV

Query:  DGAAPPS
        DGAAPPS
Subjt:  DGAAPPS

A0A6J1I7P9 40S ribosomal protein SA1.4e-14788.16Show/hide
Query:  MATGAAPPRHLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVSIENPQDIIVQSARPYGQRAVLKFAQHTGAH
        MATGAAP R LSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL MAARVIV+IENPQDIIVQSARPYGQRAVLKFAQ+TG H
Subjt:  MATGAAPPRHLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVSIENPQDIIVQSARPYGQRAVLKFAQHTGAH

Query:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGYKWDV
        AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAG+KWDV
Subjt:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGYKWDV

Query:  MVDLFFYREPEETKEKDEDEALPPPDFGIADYGASALGASDQWTAQIADAQWGGA-AADAAAPPPASAVGWTQEPVGLAADEWDTAVAPPPPA-PAVDGA
        MVDLFFYREPEE KEK+E+EALPPPDFGIADYGA+ L ASDQW AQI+DAQWG A    A A P AS+V W  EPV LAA+EW+ AVAPPPPA PA DGA
Subjt:  MVDLFFYREPEETKEKDEDEALPPPDFGIADYGASALGASDQWTAQIADAQWGGA-AADAAAPPPASAVGWTQEPVGLAADEWDTAVAPPPPA-PAVDGA

Query:  APPS
        AP S
Subjt:  APPS

SwissProt top hitse value%identityAlignment
A5BUU4 40S ribosomal protein SA6.5e-12676.62Show/hide
Query:  AAPPRHLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVSIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAG
        A P R LSQKE DIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQ+AARVIV+IENP+DIIVQSARPYGQRAVLKFAQ+TGAHAIAG
Subjt:  AAPPRHLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVSIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAG

Query:  RHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGYKWDVMVDL
        RHTPGTFTNQLQTSF+EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMR TI  G+KWDVMVDL
Subjt:  RHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGYKWDVMVDL

Query:  FFYREPEETKEKDEDEALPPPDFGIADYGASALG--ASDQWTAQIADAQWGGAAADAAAPPPA-SAVGW-----TQEPVGLAADEWDTAVAPP--PPAPA
        FFYREPEE KE++ DE +  PD+GI DY A+ALG      W A I DA   GA   A AP PA     W         V +A D WD A APP   P P 
Subjt:  FFYREPEETKEKDEDEALPPPDFGIADYGASALG--ASDQWTAQIADAQWGGAAADAAAPPPA-SAVGW-----TQEPVGLAADEWDTAVAPP--PPAPA

Query:  VDGAAPPS
        V+G  PP+
Subjt:  VDGAAPPS

O22518 40S ribosomal protein SA3.0e-12376.17Show/hide
Query:  AAPPRHLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVSIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAG
        AAPPR LSQKEADIQMMLAA+VHLGTKNC+FQMERY+FKRRNDGIYIINLGKTWEKLQ+AARVIV+IENPQDIIVQSARPYGQRAVLKFAQ+TGAHAIAG
Subjt:  AAPPRHLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVSIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAG

Query:  RHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGYKWDVMVDL
        RHTPGTFTNQLQTSF+EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIR G KWDVMVDL
Subjt:  RHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGYKWDVMVDL

Query:  FFYREPEETKEKDEDEALPPPDFGIADYGASALGASDQWTAQIADAQWGGAAADAAAPPPASAVGWTQEPVGLAADEWDTAVAPPPPAPAVDGAAPPS
        FFYREPEE K+++E+EA P  D+ I D+ A A+ A  QW   I D  W  A        P    G   E    A  +W  AV PP   P      PPS
Subjt:  FFYREPEETKEKDEDEALPPPDFGIADYGASALGASDQWTAQIADAQWGGAAADAAAPPPASAVGWTQEPVGLAADEWDTAVAPPPPAPAVDGAAPPS

O65751 40S ribosomal protein SA3.7e-12174.34Show/hide
Query:  MATGAAPPRHLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVSIENPQDIIVQSARPYGQRAVLKFAQHTGAH
        MAT  AP R L+QKEADIQMMLAA+VHLGTKNCNFQMERY+FKRRNDGIYIINLGKTW+KL +AAR+IV+IEN QDIIVQSARPYGQRAVLKFAQ+TGAH
Subjt:  MATGAAPPRHLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVSIENPQDIIVQSARPYGQRAVLKFAQHTGAH

Query:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGYKWDV
        AIAGRHTPGTFTNQLQTSF+EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPM +VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIR G KWDV
Subjt:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGYKWDV

Query:  MVDLFFYREPEETKEKDEDEALPPPDFGIADYGASALGASDQWTAQIADAQWGGAAADAAAPPPASAVGWTQEPVGLAADEWDTAVAPPPPAPAVDGAAP
        MVDLFFYREPEE K+ +EDE +  PD+ IAD+  SA+ +  QW A I D  W  A       P   AV W   P  +A D W  AV PP   P     + 
Subjt:  MVDLFFYREPEETKEKDEDEALPPPDFGIADYGASALGASDQWTAQIADAQWGGAAADAAAPPPASAVGWTQEPVGLAADEWDTAVAPPPPAPAVDGAAP

Query:  PSDG
        P+ G
Subjt:  PSDG

O80377 40S ribosomal protein SA8.8e-12376.82Show/hide
Query:  MATGAAPPRHLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVSIENPQDIIVQSARPYGQRAVLKFAQHTGAH
        MA+GA   R LS  EADIQMM AAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKL +AARVIVSIENPQDIIVQSARPYGQRAVLKFAQ+TGAH
Subjt:  MATGAAPPRHLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVSIENPQDIIVQSARPYGQRAVLKFAQHTGAH

Query:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGYKWDV
        AIAGRHTPGTFTNQLQTSF+EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMRG I  G+KW+V
Subjt:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGYKWDV

Query:  MVDLFFYREPEETKEKDEDEALPPPDFGIADYGASALGASDQWTAQIADAQWGGAAADAAAPPPASAVGWTQEPVG-LAADEWDTAVAPP-PPAPAVDGA
        MVDLFFYREPEETK+++E++ LP  D+ +ADY A+ +G +DQW A I DAQWGG   D   P  ++    T    G +A D WD A APP P A  +D  
Subjt:  MVDLFFYREPEETKEKDEDEALPPPDFGIADYGASALGASDQWTAQIADAQWGGAAADAAAPPPASAVGWTQEPVG-LAADEWDTAVAPP-PPAPAVDGA

Query:  AP
        AP
Subjt:  AP

Q08682 40S ribosomal protein Sa-11.1e-12076.35Show/hide
Query:  MAT-GAAPPRHLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVSIENPQDIIVQSARPYGQRAVLKFAQHTGA
        MAT G+A    LSQKEAD++MM AAEVHLGTKNCN+QMERYVFKRRNDGIYI NLGKTWEKLQMAARVIV+IENPQDIIVQSARPYGQRAVLKFAQ+TGA
Subjt:  MAT-GAAPPRHLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVSIENPQDIIVQSARPYGQRAVLKFAQHTGA

Query:  HAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGYKWD
        +AIAGRHTPGTFTNQ+QTSF+EPRLLILTDPRTDHQPIKE ALGNIP IAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI AG KWD
Subjt:  HAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGYKWD

Query:  VMVDLFFYREPEETKEKDEDEALPPPDFGIADYGASALGASDQW-TAQIADAQWGGAAADAAAPPPASAVGWTQEPVGLAADEWDTAVAPPPPAPA
        VMVDLFFYREPEETK +DEDEA P  ++G        +   DQW TAQI DA W G      +  PA+A  W+      A   W+ A APP  APA
Subjt:  VMVDLFFYREPEETKEKDEDEALPPPDFGIADYGASALGASDQW-TAQIADAQWGGAAADAAAPPPASAVGWTQEPVGLAADEWDTAVAPPPPAPA

Arabidopsis top hitse value%identityAlignment
AT1G72370.1 40s ribosomal protein SA7.6e-12276.35Show/hide
Query:  MAT-GAAPPRHLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVSIENPQDIIVQSARPYGQRAVLKFAQHTGA
        MAT G+A    LSQKEAD++MM AAEVHLGTKNCN+QMERYVFKRRNDGIYI NLGKTWEKLQMAARVIV+IENPQDIIVQSARPYGQRAVLKFAQ+TGA
Subjt:  MAT-GAAPPRHLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVSIENPQDIIVQSARPYGQRAVLKFAQHTGA

Query:  HAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGYKWD
        +AIAGRHTPGTFTNQ+QTSF+EPRLLILTDPRTDHQPIKE ALGNIP IAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI AG KWD
Subjt:  HAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGYKWD

Query:  VMVDLFFYREPEETKEKDEDEALPPPDFGIADYGASALGASDQW-TAQIADAQWGGAAADAAAPPPASAVGWTQEPVGLAADEWDTAVAPPPPAPA
        VMVDLFFYREPEETK +DEDEA P  ++G        +   DQW TAQI DA W G      +  PA+A  W+      A   W+ A APP  APA
Subjt:  VMVDLFFYREPEETKEKDEDEALPPPDFGIADYGASALGASDQW-TAQIADAQWGGAAADAAAPPPASAVGWTQEPVGLAADEWDTAVAPPPPAPA

AT1G72370.2 40s ribosomal protein SA8.4e-12176.35Show/hide
Query:  MAT-GAAPPRHLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVSIENPQDIIVQSARPYGQRAVLKFAQHTGA
        MAT G+A    LSQKEAD++MM AAEVHLGTKNCN+QMERYVFKRRNDGIYI NLGKTWEKLQMAARVIV+IENPQDIIVQSARPYGQRAVLKFAQ+TGA
Subjt:  MAT-GAAPPRHLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVSIENPQDIIVQSARPYGQRAVLKFAQHTGA

Query:  HAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGYKWD
        +AIAGRHTPGTFTNQ+QTSF+EPRLLILTDPRTDHQPIKE ALGNIP IAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI AG KWD
Subjt:  HAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGYKWD

Query:  VMVDLFFYREPEETKEKDEDEALPPPDFGIADYGASALGASDQW-TAQIADAQWGGAAADAAAPPPASAVGWTQEPVGLAADEWDTAVAPPPPAPA
        VMVDLFFYREPEETK +DEDEA P  ++G        +   DQW TAQI DA W G      +  PA+A  W+      +AD    A APP  APA
Subjt:  VMVDLFFYREPEETKEKDEDEALPPPDFGIADYGASALGASDQW-TAQIADAQWGGAAADAAAPPPASAVGWTQEPVGLAADEWDTAVAPPPPAPA

AT3G04770.1 40s ribosomal protein SA B2.0e-10187.94Show/hide
Query:  AAPPRHLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVSIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAG
        A   R +S+KEADIQMML+A+VHLGTKNCN+QMERYVFKRR+DGIYIINLGKTW+KLQMAARVIV+IENP+DIIVQSARPYGQRAVLKFAQ+TG +AIAG
Subjt:  AAPPRHLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVSIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAG

Query:  RHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGYKWDVMVD
        RHTPGTFTNQ+QTSF+EPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPM FVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI A  KWDVMV+
Subjt:  RHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGYKWDVMVD

AT3G04770.2 40s ribosomal protein SA B9.0e-11573.59Show/hide
Query:  AAPPRHLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVSIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAG
        A   R +S+KEADIQMML+A+VHLGTKNCN+QMERYVFKRR+DGIYIINLGKTW+KLQMAARVIV+IENP+DIIVQSARPYGQRAVLKFAQ+TG +AIAG
Subjt:  AAPPRHLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVSIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAG

Query:  RHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGYKWDVMVDL
        RHTPGTFTNQ+QTSF+EPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPM FVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI A  KWDVMVDL
Subjt:  RHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGYKWDVMVDL

Query:  FFYREPEETKEKDEDEALPPPDFGIADYGASALGASDQW-TAQIADAQWGGAAADAAAPPPA----SAVGWTQEPVGLAADEWD
        FFYREPEE K++ ++EA    D+G+           DQW TAQI+DA W G      +  PA     A GW  E   + A  W+
Subjt:  FFYREPEETKEKDEDEALPPPDFGIADYGASALGASDQW-TAQIADAQWGGAAADAAAPPPA----SAVGWTQEPVGLAADEWD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACGGGAGCTGCACCACCTCGCCATCTCTCCCAGAAAGAGGCCGACATTCAGATGATGTTGGCTGCCGAAGTTCATCTCGGCACCAAAAACTGCAATTTTCAAAT
GGAACGTTACGTTTTCAAGCGCCGTAATGATGGAATTTACATCATTAACCTCGGTAAAACATGGGAAAAACTTCAGATGGCTGCTAGAGTTATTGTGTCTATTGAGAATC
CTCAAGATATCATTGTTCAGTCTGCTAGGCCTTATGGTCAGAGAGCTGTTTTGAAGTTTGCTCAACACACCGGTGCTCATGCAATTGCTGGAAGGCACACTCCCGGAACA
TTTACCAATCAGCTTCAGACCTCATTCAATGAGCCACGCCTCCTTATACTCACTGATCCTAGAACCGATCATCAGCCAATCAAGGAAGCTGCCCTTGGTAACATTCCTAC
AATAGCCTTCTGTGACACCGATTCCCCAATGCGTTTTGTTGATATTGGAATCCCTGCTAACAACAAGGGTAAACATAGCATTGGGTGTCTGTTCTGGCTTTTGGCAAGGA
TGGTTCTACAAATGCGTGGAACAATTCGTGCTGGGTACAAATGGGACGTGATGGTGGATTTGTTTTTCTATCGCGAGCCTGAGGAGACCAAGGAGAAAGACGAAGATGAG
GCCCTTCCGCCCCCTGATTTTGGCATTGCTGACTATGGTGCCTCTGCACTTGGTGCTTCAGATCAATGGACTGCACAAATTGCTGATGCTCAGTGGGGTGGTGCTGCTGC
AGATGCTGCTGCTCCTCCACCAGCTTCCGCTGTCGGGTGGACACAAGAGCCAGTTGGTTTGGCAGCAGATGAATGGGATACTGCAGTAGCGCCTCCGCCACCAGCGCCTG
CCGTTGATGGCGCAGCACCTCCCTCCGATGGTGCAGCATCTCCCTCCGATGGTGCAGCACCTCCCTCCGATGGTGCAGCACCTCCCTCCACGGGTGATTGGTTTTGA
mRNA sequenceShow/hide mRNA sequence
CTTTTCAGTTGGTGAAGTGTTTGCAGTCGGCGAAGTGTCCGAATCTCCTTCCTTCTTCCTTCAATTCGTTGATTATCAGATTCAGCCATGGCGACGGGAGCTGCACCACC
TCGCCATCTCTCCCAGAAAGAGGCCGACATTCAGATGATGTTGGCTGCCGAAGTTCATCTCGGCACCAAAAACTGCAATTTTCAAATGGAACGTTACGTTTTCAAGCGCC
GTAATGATGGAATTTACATCATTAACCTCGGTAAAACATGGGAAAAACTTCAGATGGCTGCTAGAGTTATTGTGTCTATTGAGAATCCTCAAGATATCATTGTTCAGTCT
GCTAGGCCTTATGGTCAGAGAGCTGTTTTGAAGTTTGCTCAACACACCGGTGCTCATGCAATTGCTGGAAGGCACACTCCCGGAACATTTACCAATCAGCTTCAGACCTC
ATTCAATGAGCCACGCCTCCTTATACTCACTGATCCTAGAACCGATCATCAGCCAATCAAGGAAGCTGCCCTTGGTAACATTCCTACAATAGCCTTCTGTGACACCGATT
CCCCAATGCGTTTTGTTGATATTGGAATCCCTGCTAACAACAAGGGTAAACATAGCATTGGGTGTCTGTTCTGGCTTTTGGCAAGGATGGTTCTACAAATGCGTGGAACA
ATTCGTGCTGGGTACAAATGGGACGTGATGGTGGATTTGTTTTTCTATCGCGAGCCTGAGGAGACCAAGGAGAAAGACGAAGATGAGGCCCTTCCGCCCCCTGATTTTGG
CATTGCTGACTATGGTGCCTCTGCACTTGGTGCTTCAGATCAATGGACTGCACAAATTGCTGATGCTCAGTGGGGTGGTGCTGCTGCAGATGCTGCTGCTCCTCCACCAG
CTTCCGCTGTCGGGTGGACACAAGAGCCAGTTGGTTTGGCAGCAGATGAATGGGATACTGCAGTAGCGCCTCCGCCACCAGCGCCTGCCGTTGATGGCGCAGCACCTCCC
TCCGATGGTGCAGCATCTCCCTCCGATGGTGCAGCACCTCCCTCCGATGGTGCAGCACCTCCCTCCACGGGTGATTGGTTTTGAGAAATATGTGGTTCCTACCTAAATGT
AGTACTCAAATGGATTTATTATTACGAGTTTGTTTATTTAGAAATGTATCGTCCTTTATGGTTGGAAAGTCGACTCAATTTTGTTTCATACTCAGGTTCGAGATTTTAAG
ATTAAAATTTCAACTTTAATACATTTTGAGTGTCTTATGCCTTATGCCTTACCATGTACTATTAATAATGAGTTTTATTATTGTTATTGGGGAAAAAAAATCTAAATTTA
C
Protein sequenceShow/hide protein sequence
MATGAAPPRHLSQKEADIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQMAARVIVSIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGT
FTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGYKWDVMVDLFFYREPEETKEKDEDE
ALPPPDFGIADYGASALGASDQWTAQIADAQWGGAAADAAAPPPASAVGWTQEPVGLAADEWDTAVAPPPPAPAVDGAAPPSDGAASPSDGAAPPSDGAAPPSTGDWF