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Sed0011940 (gene) of Chayote v1 genome

Gene IDSed0011940
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG10:35633124..35633422
RNA-Seq ExpressionSed0011940
SyntenySed0011940
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571864.1 hypothetical protein SDJN03_28592, partial [Cucurbita argyrosperma subsp. sororia]9.2e-1055.79Show/hide
Query:  MARFGILIAFVATLLLSSLSSSSSLSSSSSMIVSRKLLASDFPEFPDVSVPPFYPEFKLPPPFS--------------SSSIPNIPFFSPPTSPT
        MAR  ILIA VATL LSS +SS S  SSSS++VSRKLLA    E PD+ VPP  P F LPPPFS               SS PN PFF PPT+P+
Subjt:  MARFGILIAFVATLLLSSLSSSSSLSSSSSMIVSRKLLASDFPEFPDVSVPPFYPEFKLPPPFS--------------SSSIPNIPFFSPPTSPT
KGN43761.1 hypothetical protein Csa_017175 [Cucumis sativus]4.4e-2076.14Show/hide
Query:  MARFGILIAFVATLLLSSLSSSSSLSSSSSMIVSRKLLASDFPEFPDVSVPPFYPEFKLPPPFS-------SSSIPNIPFFSPPTSPT
        MARF +LIAFVATLLLSSLSSSS  SSSSS+IVSRKLLASDFP  PD +VPPFYPEFKLPPPFS       SS  PN PFFSPPT+P+
Subjt:  MARFGILIAFVATLLLSSLSSSSSLSSSSSMIVSRKLLASDFPEFPDVSVPPFYPEFKLPPPFS-------SSSIPNIPFFSPPTSPT
TrEMBL top hitse value%identityAlignment
A0A0A0K7G8 Uncharacterized protein2.1e-2076.14Show/hide
Query:  MARFGILIAFVATLLLSSLSSSSSLSSSSSMIVSRKLLASDFPEFPDVSVPPFYPEFKLPPPFS-------SSSIPNIPFFSPPTSPT
        MARF +LIAFVATLLLSSLSSSS  SSSSS+IVSRKLLASDFP  PD +VPPFYPEFKLPPPFS       SS  PN PFFSPPT+P+
Subjt:  MARFGILIAFVATLLLSSLSSSSSLSSSSSMIVSRKLLASDFPEFPDVSVPPFYPEFKLPPPFS-------SSSIPNIPFFSPPTSPT
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCGTTTTGGTATTCTCATTGCTTTTGTAGCAACATTGCTTCTTTCAAGCTTGAGTTCTTCTTCTTCATTGTCATCGTCTTCTTCGATGATTGTATCTCGTAAGCT
TCTGGCCTCGGATTTTCCCGAGTTTCCCGATGTTAGTGTTCCTCCATTTTATCCTGAATTCAAATTACCTCCTCCATTTTCTTCATCTTCCATTCCCAACATTCCATTTT
TCTCTCCACCCACTAGCCCTACTCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATCTATGGCTCGTTTTGGTATTCTCATTGCTTTTGTAGCAACATTGCTTCTTTCAAGCTTGAGTTCTTCTTCTTCATTGTCATCGTCTTCTTCGATGATTGTATCTCGTA
AGCTTCTGGCCTCGGATTTTCCCGAGTTTCCCGATGTTAGTGTTCCTCCATTTTATCCTGAATTCAAATTACCTCCTCCATTTTCTTCATCTTCCATTCCCAACATTCCA
TTTTTCTCTCCACCCACTAGCCCTACTCTTTGAGGGGAAATTACCTTAATTTCTCTAAAACTCTCTCTCTCTCTCTCTC
Protein sequenceShow/hide protein sequence
MARFGILIAFVATLLLSSLSSSSSLSSSSSMIVSRKLLASDFPEFPDVSVPPFYPEFKLPPPFSSSSIPNIPFFSPPTSPTL