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Sed0011952 (gene) of Chayote v1 genome

Gene IDSed0011952
OrganismSechium edule (Chayote v1)
DescriptionS locus-related glycoprotein 1 binding pollen coat
Genome locationLG05:10651363..10651884
RNA-Seq ExpressionSed0011952
SyntenySed0011952
Gene Ontology termsGO:0044419 - interspecies interaction between organisms (biological process)
InterPro domainsIPR010851 - Defensin-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BBH07492.1 hypothetical protein Prudu_019451 [Prunus dulcis]6.7e-0855.77Show/hide
Query:  AVQRCQEILNNSGCILKDCGQKCWEKHFSMSLKCIPTDLKQTIYACFCFFDC
        A +RC E L  SGC L DCG+KCWEKH     KCI  ++ QT YAC+C F+C
Subjt:  AVQRCQEILNNSGCILKDCGQKCWEKHFSMSLKCIPTDLKQTIYACFCFFDC

KAA0042348.1 S locus-related glycoprotein 1 binding pollen coat [Cucumis melo var. makuwa]4.2e-1858.67Show/hide
Query:  VVFISFIFVVALILAPQKVSAVQRCQEILNNSGCILKDCGQKCWEKHFSMSLKCIPTDLKQTIYACFCFFDCGQN
        ++ I+    VA+IL PQ   AV+RCQ+ L ++GC L DCGQKCWEKH   S +CIPTD  QTIYAC+CF++CGQN
Subjt:  VVFISFIFVVALILAPQKVSAVQRCQEILNNSGCILKDCGQKCWEKHFSMSLKCIPTDLKQTIYACFCFFDCGQN

KAE8649772.1 hypothetical protein Csa_012405, partial [Cucumis sativus]8.5e-1968.25Show/hide
Query:  ALILAPQKVSAVQRCQEILNNSGCILKDCGQKCWEKHFSMSLKCIPTDLKQTIYACFCFFDCG
        AL+LA Q VSA QRCQ++L N+GC L DCG+KCWEKH ++S +CIPT+  QTIYAC+CFFDCG
Subjt:  ALILAPQKVSAVQRCQEILNNSGCILKDCGQKCWEKHFSMSLKCIPTDLKQTIYACFCFFDCG

KGN64987.1 hypothetical protein Csa_022748 [Cucumis sativus]8.8e-1660.27Show/hide
Query:  VVFISFIFVVALILAPQKVSAVQRCQEILNNSGCILKDCGQKCWEKHFSMSLKCIPTDLKQTIYACFCFFDCG
        ++ I  I  VA+I  PQ   A  RCQ+IL NSGC L DCGQKCWEKH   S +CIPTD  QTIYAC+CF+ CG
Subjt:  VVFISFIFVVALILAPQKVSAVQRCQEILNNSGCILKDCGQKCWEKHFSMSLKCIPTDLKQTIYACFCFFDCG

XP_012090834.1 defensin-like protein 156 [Jatropha curcas]1.5e-0739.74Show/hide
Query:  NSLFHVVFISFIFVVALILAPQKVSAVQRCQEILNNSGCILKDCGQKCWEKHFSMSLKCIPTDLKQTIYACFCFFDCG
        N  F+  FI F+ +    + PQ   A ++CQE+L+  GC+L+DC ++C+EKH      CIP   K+  Y+C+CF+ CG
Subjt:  NSLFHVVFISFIFVVALILAPQKVSAVQRCQEILNNSGCILKDCGQKCWEKHFSMSLKCIPTDLKQTIYACFCFFDCG

TrEMBL top hitse value%identityAlignment
A0A0A0KYP7 Uncharacterized protein3.1e-1148.81Show/hide
Query:  MAQLNSLFHVVFISFIFVVALILAPQKVSAVQRCQEILNNSGCILKDCGQKCWEKHFSMSLKCIPTDLKQTIYACFCFFDCGQN
        MA L+S F V  I  IF V++IL PQ  SA+ +CQ+ L   GCI  +CGQKC + H   + KCI TD   T YAC+CF++C +N
Subjt:  MAQLNSLFHVVFISFIFVVALILAPQKVSAVQRCQEILNNSGCILKDCGQKCWEKHFSMSLKCIPTDLKQTIYACFCFFDCGQN

A0A0A0L2R3 Uncharacterized protein2.2e-2063.01Show/hide
Query:  VVFISFIFVVALILAPQKVSAVQRCQEILNNSGCILKDCGQKCWEKHFSMSLKCIPTDLKQTIYACFCFFDCG
        ++  + IF VAL+LA Q VSA QRCQ++L N+GC L DCG+KCWEKH ++S +CIPT+  QTIYAC+CFFDCG
Subjt:  VVFISFIFVVALILAPQKVSAVQRCQEILNNSGCILKDCGQKCWEKHFSMSLKCIPTDLKQTIYACFCFFDCG

A0A0A0LVZ5 Uncharacterized protein4.2e-1660.27Show/hide
Query:  VVFISFIFVVALILAPQKVSAVQRCQEILNNSGCILKDCGQKCWEKHFSMSLKCIPTDLKQTIYACFCFFDCG
        ++ I  I  VA+I  PQ   A  RCQ+IL NSGC L DCGQKCWEKH   S +CIPTD  QTIYAC+CF+ CG
Subjt:  VVFISFIFVVALILAPQKVSAVQRCQEILNNSGCILKDCGQKCWEKHFSMSLKCIPTDLKQTIYACFCFFDCG

A0A4Y1RT05 Uncharacterized protein3.3e-0855.77Show/hide
Query:  AVQRCQEILNNSGCILKDCGQKCWEKHFSMSLKCIPTDLKQTIYACFCFFDC
        A +RC E L  SGC L DCG+KCWEKH     KCI  ++ QT YAC+C F+C
Subjt:  AVQRCQEILNNSGCILKDCGQKCWEKHFSMSLKCIPTDLKQTIYACFCFFDC

A0A5A7THQ7 S locus-related glycoprotein 1 binding pollen coat2.0e-1858.67Show/hide
Query:  VVFISFIFVVALILAPQKVSAVQRCQEILNNSGCILKDCGQKCWEKHFSMSLKCIPTDLKQTIYACFCFFDCGQN
        ++ I+    VA+IL PQ   AV+RCQ+ L ++GC L DCGQKCWEKH   S +CIPTD  QTIYAC+CF++CGQN
Subjt:  VVFISFIFVVALILAPQKVSAVQRCQEILNNSGCILKDCGQKCWEKHFSMSLKCIPTDLKQTIYACFCFFDCGQN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCAACTAAATTCTCTTTTTCACGTTGTCTTCATTTCTTTTATCTTTGTAGTTGCACTGATTTTGGCTCCCCAAAAAGTCTCCGCTGTTCAAAGATGCCAGGAAAT
ATTGAACAACAGTGGTTGCATATTGAAAGACTGTGGACAGAAATGTTGGGAGAAACACTTTTCTATGTCATTAAAATGCATTCCCACCGATCTTAAGCAAACCATCTATG
CTTGTTTTTGTTTCTTTGATTGTGGTCAAAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGCAACTAAATTCTCTTTTTCACGTTGTCTTCATTTCTTTTATCTTTGTAGTTGCACTGATTTTGGCTCCCCAAAAAGTCTCCGCTGTTCAAAGATGCCAGGAAAT
ATTGAACAACAGTGGTTGCATATTGAAAGACTGTGGACAGAAATGTTGGGAGAAACACTTTTCTATGTCATTAAAATGCATTCCCACCGATCTTAAGCAAACCATCTATG
CTTGTTTTTGTTTCTTTGATTGTGGTCAAAATTGA
Protein sequenceShow/hide protein sequence
MAQLNSLFHVVFISFIFVVALILAPQKVSAVQRCQEILNNSGCILKDCGQKCWEKHFSMSLKCIPTDLKQTIYACFCFFDCGQN