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Sed0011955 (gene) of Chayote v1 genome

Gene IDSed0011955
OrganismSechium edule (Chayote v1)
DescriptionProtein FAM110A like
Genome locationLG08:2531879..2532878
RNA-Seq ExpressionSed0011955
SyntenySed0011955
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587694.1 hypothetical protein SDJN03_16259, partial [Cucurbita argyrosperma subsp. sororia]1.6e-4767.11Show/hide
Query:  MNRKVLLRSPAIIHRQPSPKDEGIDAPRPKGRFAEVAGGSAAECTAVCCCCPWAVLNIVIFAVYRIPAGLCRKALNRRK--RRGKKKYLIQQRKAASRDF
        M RKVLLRS AI  +  S K E  DA R K +FAE+AGGSAA+CT +CCCCPW V+N+VIFAVYR+P GLCRKA+NRRK  RR K+K LIQQRKA S++F
Subjt:  MNRKVLLRSPAIIHRQPSPKDEGIDAPRPKGRFAEVAGGSAAECTAVCCCCPWAVLNIVIFAVYRIPAGLCRKALNRRK--RRGKKKYLIQQRKAASRDF

Query:  ADGRVGPAMESFEAHKPVGDVAGGDDLERLEEEMWDRFSQTGFWRSSSQRHE
         D  V PA+ESFEA K   D A G+D+ +LEEEMW RF+QTGFWRSSSQRHE
Subjt:  ADGRVGPAMESFEAHKPVGDVAGGDDLERLEEEMWDRFSQTGFWRSSSQRHE

KGN63891.1 hypothetical protein Csa_014343 [Cucumis sativus]1.8e-5171.71Show/hide
Query:  MNRKVLLRSPAIIHRQPSPKDEGIDAPRPKGRFAEVAGGSAAECTAVCCCCPWAVLNIVIFAVYRIPAGLCRKALNRRK--RRGKKKYLIQQRKAASRDF
        M RKVLLRS AI HR P  +D  IDAPR + +FAEVAGGSAAECTAVCCCCPW VLNI+IFA+YR+PAGLCRKA+NRRK  RR K+KYLIQQRKAAS DF
Subjt:  MNRKVLLRSPAIIHRQPSPKDEGIDAPRPKGRFAEVAGGSAAECTAVCCCCPWAVLNIVIFAVYRIPAGLCRKALNRRK--RRGKKKYLIQQRKAASRDF

Query:  ADGRVGPAMESFEAHKPVGDVAGGDDLERLEEEMWDRFSQTGFWRSSSQRHE
         DG VGP ++ +  H+   DVA G+DL++LE+EMW RFSQTGFWRSSSQRH+
Subjt:  ADGRVGPAMESFEAHKPVGDVAGGDDLERLEEEMWDRFSQTGFWRSSSQRHE

XP_022933995.1 uncharacterized protein LOC111441234 [Cucurbita moschata]5.4e-4867.76Show/hide
Query:  MNRKVLLRSPAIIHRQPSPKDEGIDAPRPKGRFAEVAGGSAAECTAVCCCCPWAVLNIVIFAVYRIPAGLCRKALNRRK--RRGKKKYLIQQRKAASRDF
        M RKVLLRS AI  +  S K E  DA R K +FAE+AGGSAA+CT +CCCCPW V+N+VIFAVYR+P GLCRKA+NRRK  RR K+K LIQQRKAAS++F
Subjt:  MNRKVLLRSPAIIHRQPSPKDEGIDAPRPKGRFAEVAGGSAAECTAVCCCCPWAVLNIVIFAVYRIPAGLCRKALNRRK--RRGKKKYLIQQRKAASRDF

Query:  ADGRVGPAMESFEAHKPVGDVAGGDDLERLEEEMWDRFSQTGFWRSSSQRHE
         D  V PA+ESFEA K   D A G+D+ +LEEEMW RF+QTGFWRSSSQRHE
Subjt:  ADGRVGPAMESFEAHKPVGDVAGGDDLERLEEEMWDRFSQTGFWRSSSQRHE

XP_023531763.1 uncharacterized protein LOC111793918 [Cucurbita pepo subsp. pepo]1.2e-4767.76Show/hide
Query:  MNRKVLLRSPAIIHRQPSPKDEGIDAPRPKGRFAEVAGGSAAECTAVCCCCPWAVLNIVIFAVYRIPAGLCRKALNRRK--RRGKKKYLIQQRKAASRDF
        M RKVLLRS AI  +  S K E  DA R K  FAE+AGGSAA+CT +CCCCPW V+N+VIFAVYR+P GLCRKA+NRRK  RR K+K LIQQRKAAS++F
Subjt:  MNRKVLLRSPAIIHRQPSPKDEGIDAPRPKGRFAEVAGGSAAECTAVCCCCPWAVLNIVIFAVYRIPAGLCRKALNRRK--RRGKKKYLIQQRKAASRDF

Query:  ADGRVGPAMESFEAHKPVGDVAGGDDLERLEEEMWDRFSQTGFWRSSSQRHE
         D  V PA+ESFEA K   D A G+D+ +LEEEMW RF+QTGFWRSSSQRHE
Subjt:  ADGRVGPAMESFEAHKPVGDVAGGDDLERLEEEMWDRFSQTGFWRSSSQRHE

XP_038879203.1 uncharacterized protein LOC120071168 [Benincasa hispida]1.2e-5072.55Show/hide
Query:  MNRKVLLRSPAIIHRQPSPKDEGIDAPRPKGRFAEVAGGSAAECTAVCCCCPWAVLNIVIFAVYRIPAGLCRKALNRRK--RRGKKKYLIQQRKAASRDF
        M RKVLLRSPA+ H      DE IDAP+ + +FAEVAGGSAAECTA+CCCCPW V+NIVIFAVYR+PAGLCRKA+NRRK  R+ KKK LIQQRKA S DF
Subjt:  MNRKVLLRSPAIIHRQPSPKDEGIDAPRPKGRFAEVAGGSAAECTAVCCCCPWAVLNIVIFAVYRIPAGLCRKALNRRK--RRGKKKYLIQQRKAASRDF

Query:  ADGRVG-PAMESFEAHKPVGDVAGGDDLERLEEEMWDRFSQTGFWRSSSQRHE
         DG VG P MES EAHK   DVA  +DL++LEEEMW RF+QTGFWRSSSQRHE
Subjt:  ADGRVG-PAMESFEAHKPVGDVAGGDDLERLEEEMWDRFSQTGFWRSSSQRHE

TrEMBL top hitse value%identityAlignment
A0A0A0LV48 Uncharacterized protein8.6e-5271.71Show/hide
Query:  MNRKVLLRSPAIIHRQPSPKDEGIDAPRPKGRFAEVAGGSAAECTAVCCCCPWAVLNIVIFAVYRIPAGLCRKALNRRK--RRGKKKYLIQQRKAASRDF
        M RKVLLRS AI HR P  +D  IDAPR + +FAEVAGGSAAECTAVCCCCPW VLNI+IFA+YR+PAGLCRKA+NRRK  RR K+KYLIQQRKAAS DF
Subjt:  MNRKVLLRSPAIIHRQPSPKDEGIDAPRPKGRFAEVAGGSAAECTAVCCCCPWAVLNIVIFAVYRIPAGLCRKALNRRK--RRGKKKYLIQQRKAASRDF

Query:  ADGRVGPAMESFEAHKPVGDVAGGDDLERLEEEMWDRFSQTGFWRSSSQRHE
         DG VGP ++ +  H+   DVA G+DL++LE+EMW RFSQTGFWRSSSQRH+
Subjt:  ADGRVGPAMESFEAHKPVGDVAGGDDLERLEEEMWDRFSQTGFWRSSSQRHE

A0A5A7UQK6 Uncharacterized protein4.9e-4768.71Show/hide
Query:  MNRKVLLRSPAIIHRQPSPKDEGIDAPRPKGRFAEVAGGSAAECTAVCCCCPWAVLNIVIFAVYRIPAGLCRKALNRRK--RRGKKKYLIQQRKAASRDF
        M RKVLLRS A+ HR  S +D  IDAP+ + +FAEVAGGSAAECTAVCCCCPW VLNI+IF++YR+PAGLCRKA+NRRK  RR K+KYLIQQRKA + DF
Subjt:  MNRKVLLRSPAIIHRQPSPKDEGIDAPRPKGRFAEVAGGSAAECTAVCCCCPWAVLNIVIFAVYRIPAGLCRKALNRRK--RRGKKKYLIQQRKAASRDF

Query:  ADGRVGPAMESFEAHKPVGDVAGGDDLERLEEEMWDRFSQTGFWRSS
         DG VGP ++SF  H+   DVA  +DL++LEEEMW RFSQTGFWR+S
Subjt:  ADGRVGPAMESFEAHKPVGDVAGGDDLERLEEEMWDRFSQTGFWRSS

A0A5D3DY75 Uncharacterized protein3.8e-4769.39Show/hide
Query:  MNRKVLLRSPAIIHRQPSPKDEGIDAPRPKGRFAEVAGGSAAECTAVCCCCPWAVLNIVIFAVYRIPAGLCRKALNRRK--RRGKKKYLIQQRKAASRDF
        M RKVLLRS A+ HR  S +D  IDAP+ + +FAEVAGGSAAECTAVCCCCPW VLNI IFA+YR+PAGLCRKA+NRRK  RR K+KYLIQQRKA + DF
Subjt:  MNRKVLLRSPAIIHRQPSPKDEGIDAPRPKGRFAEVAGGSAAECTAVCCCCPWAVLNIVIFAVYRIPAGLCRKALNRRK--RRGKKKYLIQQRKAASRDF

Query:  ADGRVGPAMESFEAHKPVGDVAGGDDLERLEEEMWDRFSQTGFWRSS
         DG VGP ++SF  H+   DVA  +DL++LEEEMW RFSQTGFWR+S
Subjt:  ADGRVGPAMESFEAHKPVGDVAGGDDLERLEEEMWDRFSQTGFWRSS

A0A6J1BZB0 uncharacterized protein LOC1110069728.9e-4163.23Show/hide
Query:  MNRKVLLRSPAIIHRQPSPKDEGIDAPRPKGRFAEVAGGSAAECTAVCCCCPWAVLNIVIFAVYRIPAGLCRKALNRRKRRG--KKKYLIQQRKAASRDF
        M  KVLLRSPAI H + S KDE +DAPR + +FAEVAGGSAAECTA+CCCCP  V+NIVIFA+Y++PAGLCRKAL  RKR G  KKK LIQQR+ AS++F
Subjt:  MNRKVLLRSPAIIHRQPSPKDEGIDAPRPKGRFAEVAGGSAAECTAVCCCCPWAVLNIVIFAVYRIPAGLCRKALNRRKRRG--KKKYLIQQRKAASRDF

Query:  ADGRVGP-AMESFEAHKPVGDVA-----GGDDLERLEEEMWDRFSQTGFWRSSSQ
         DG  GP  +  F+   P    A       DDL  LEEEMW +FSQTGFWRSSSQ
Subjt:  ADGRVGP-AMESFEAHKPVGDVA-----GGDDLERLEEEMWDRFSQTGFWRSSSQ

A0A6J1F6E1 uncharacterized protein LOC1114412342.6e-4867.76Show/hide
Query:  MNRKVLLRSPAIIHRQPSPKDEGIDAPRPKGRFAEVAGGSAAECTAVCCCCPWAVLNIVIFAVYRIPAGLCRKALNRRK--RRGKKKYLIQQRKAASRDF
        M RKVLLRS AI  +  S K E  DA R K +FAE+AGGSAA+CT +CCCCPW V+N+VIFAVYR+P GLCRKA+NRRK  RR K+K LIQQRKAAS++F
Subjt:  MNRKVLLRSPAIIHRQPSPKDEGIDAPRPKGRFAEVAGGSAAECTAVCCCCPWAVLNIVIFAVYRIPAGLCRKALNRRK--RRGKKKYLIQQRKAASRDF

Query:  ADGRVGPAMESFEAHKPVGDVAGGDDLERLEEEMWDRFSQTGFWRSSSQRHE
         D  V PA+ESFEA K   D A G+D+ +LEEEMW RF+QTGFWRSSSQRHE
Subjt:  ADGRVGPAMESFEAHKPVGDVAGGDDLERLEEEMWDRFSQTGFWRSSSQRHE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G27180.1 unknown protein5.0e-2040Show/hide
Query:  MNRKVLLRSPAIIHRQPS------PKDEGIDAPRPKGRFAEVAGGSAAECTAVCCCCPWAVLNIVIFAVYRIPAGLCRKALNRRKRR--GKKKY--LIQQ
        M R V+L+SP ++  + S      P    +   R K    EVAGG+AAEC AV CCCP AV+N+++ AVY++PA +C+KA  R KRR   +K++  L   
Subjt:  MNRKVLLRSPAIIHRQPS------PKDEGIDAPRPKGRFAEVAGGSAAECTAVCCCCPWAVLNIVIFAVYRIPAGLCRKALNRRKRR--GKKKY--LIQQ

Query:  RKAASRDFADGRVGPAMESFEAHKPVGDVAGGD--DLERLEEEMWDRFSQTGFWRSSSQR
            S      R+     + E       V+GG+  D+ RLE EM DRF   GFWRS SQ+
Subjt:  RKAASRDFADGRVGPAMESFEAHKPVGDVAGGD--DLERLEEEMWDRFSQTGFWRSSSQR

AT3G11690.1 unknown protein2.1e-1331.82Show/hide
Query:  SPAIIHRQPSPKDEGIDAPRPKGRF-----AEVAGGSAAECTAVCCCCPWAVLNIVIFAVYRIPAGLCRKALNRRKRRGKKKYLI------------QQR
        SP+  +R+       + +P P+        AE  GG+ A C AV CCCP  ++N+++ A+Y++P G+CR+A+  R+R+   K  I             QR
Subjt:  SPAIIHRQPSPKDEGIDAPRPKGRF-----AEVAGGSAAECTAVCCCCPWAVLNIVIFAVYRIPAGLCRKALNRRKRRGKKKYLI------------QQR

Query:  KAASRDFA-------DGRVGPAMESFEAHKPVG-DVAGGDDLER-----------LEEEMWDRFSQTGFWRSSSQR
           + +FA       D       ++F   K +G  VA G   E            LE+EMW+RF   GFWRS SQR
Subjt:  KAASRDFA-------DGRVGPAMESFEAHKPVG-DVAGGDDLER-----------LEEEMWDRFSQTGFWRSSSQR

AT5G06380.1 unknown protein4.9e-1540.52Show/hide
Query:  AEVAGGSAAECTAVCCCCPWAVLNIVIFAVYRIPAGLCRKALN--RRKRRGKKKYLIQQRKAASRDFADGRVGPAMESFEAHKPVGDVAGGDDLERLEEE
        AE  GG+ A C A+C C P +V+N+V+ AVY++P GLCR+A+   RRKR  KK+++   R+      +   V P +ES +  +   +    + +  LE+E
Subjt:  AEVAGGSAAECTAVCCCCPWAVLNIVIFAVYRIPAGLCRKALN--RRKRRGKKKYLIQQRKAASRDFADGRVGPAMESFEAHKPVGDVAGGDDLERLEEE

Query:  MWDRFSQTGFWRSSSQ
        MW RF   GFWRS SQ
Subjt:  MWDRFSQTGFWRSSSQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATCGGAAGGTTCTCCTCCGATCTCCGGCAATCATCCACCGCCAACCGTCGCCGAAGGACGAGGGGATCGACGCGCCGCGGCCGAAGGGCCGGTTCGCGGAGGTTGC
CGGCGGTTCTGCCGCGGAGTGCACGGCGGTTTGTTGCTGCTGTCCATGGGCGGTGCTCAACATCGTGATCTTCGCCGTGTACCGGATACCGGCGGGGCTGTGCCGGAAGG
CGCTGAACAGGCGAAAGCGACGCGGTAAAAAGAAATATCTCATCCAGCAGCGCAAGGCCGCTTCTCGGGATTTTGCCGATGGGCGGGTGGGGCCCGCGATGGAGAGTTTC
GAGGCCCACAAACCGGTGGGTGACGTGGCGGGCGGGGATGACTTGGAGAGGCTAGAAGAGGAAATGTGGGACCGGTTCAGTCAGACCGGGTTTTGGAGAAGTTCTTCTCA
AAGGCACGAGGAGTAA
mRNA sequenceShow/hide mRNA sequence
CATGCTTGTTCAGCCAAATTAAAGAGTACGAAAATGGGAGAAAAATAGGCAGTTTTAGTTTTCTTAGATATTATTATTATTATTATTTAAATATGGCAGTTTCTTTTCTT
AGTAAAATCCAACCCCCCCTTTCTTCTTCGTTCTCGTTTCTTCATCTACCAGACAACAATGGCCGCACGAACAACCGAAAACCTCCATATACACTACGCGTTTTCTCCTT
TTTCTCTCTCTCAATCCCTCCATTTCCCCGTCTTCTTCGCTCCTCCCATGCCGATCTCACAACTTCCTCTTCTCGACTAAGCCCTACCTTCTTCTTTACCTCATCTCCCT
CGCTCCACATCGCATTCGCACATGCTTTTTTCCCGGTGGATTCACTCATTCCTCACGAAATGCGAATCCAAAGCAATTGAAATGCGGAATTACATGACCTCGAATCGGAA
GCGCATACAAAGAAATTGAAATCAGAATACGTACATTCGTCGTCTTCGTTCGATTCGGAATCGTACGTTTCCGATTCGAGTTTCTTCAATCGGCTGTGTTTTACATGAAT
CGGAAGGTTCTCCTCCGATCTCCGGCAATCATCCACCGCCAACCGTCGCCGAAGGACGAGGGGATCGACGCGCCGCGGCCGAAGGGCCGGTTCGCGGAGGTTGCCGGCGG
TTCTGCCGCGGAGTGCACGGCGGTTTGTTGCTGCTGTCCATGGGCGGTGCTCAACATCGTGATCTTCGCCGTGTACCGGATACCGGCGGGGCTGTGCCGGAAGGCGCTGA
ACAGGCGAAAGCGACGCGGTAAAAAGAAATATCTCATCCAGCAGCGCAAGGCCGCTTCTCGGGATTTTGCCGATGGGCGGGTGGGGCCCGCGATGGAGAGTTTCGAGGCC
CACAAACCGGTGGGTGACGTGGCGGGCGGGGATGACTTGGAGAGGCTAGAAGAGGAAATGTGGGACCGGTTCAGTCAGACCGGGTTTTGGAGAAGTTCTTCTCAAAGGCA
CGAGGAGTAA
Protein sequenceShow/hide protein sequence
MNRKVLLRSPAIIHRQPSPKDEGIDAPRPKGRFAEVAGGSAAECTAVCCCCPWAVLNIVIFAVYRIPAGLCRKALNRRKRRGKKKYLIQQRKAASRDFADGRVGPAMESF
EAHKPVGDVAGGDDLERLEEEMWDRFSQTGFWRSSSQRHEE