; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0011971 (gene) of Chayote v1 genome

Gene IDSed0011971
OrganismSechium edule (Chayote v1)
DescriptionLate embryogenesis abundant protein (LEA) family protein
Genome locationLG09:28352162..28354973
RNA-Seq ExpressionSed0011971
SyntenySed0011971
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAV70662.1 hypothetical protein CFOL_v3_14160, partial [Cephalotus follicularis]7.1e-2152.99Show/hide
Query:  SLLLKTPWISKAFVSHTPR--HASS--QAGVAAADGAAHAVKR---EAEKSAEKVKDKVVSSAEEVSEKTKEAAGKVSETAQDMAGKAKQTVEGAWETVK
        ++L++ PW S+ FV  T R  HAS   Q   +A D A  A K+   EA+K+ E VKDK  S+AE+V++K ++AA KV ETAQD+  KAKQTV+ AW +VK
Subjt:  SLLLKTPWISKAFVSHTPR--HASS--QAGVAAADGAAHAVKR---EAEKSAEKVKDKVVSSAEEVSEKTKEAAGKVSETAQDMAGKAKQTVEGAWETVK

Query:  DTTQSLKEKVVGKVEESKEAIKDTADNLKNNVKS
        DTT  +K+ VVGK EESKE+IK+TA+N+K NVK+
Subjt:  DTTQSLKEKVVGKVEESKEAIKDTADNLKNNVKS

XP_008457975.1 PREDICTED: uncharacterized protein At4g13230 [Cucumis melo]3.7e-4674.15Show/hide
Query:  MASFFASSATIPKLHEAGSLLLKTPWISKAFVSHTPRHASSQAGVAAADGAAHAVKREAEKSAEKVKDKVVSSAEEVSEKTKEAAGKVSETAQDMAGKAK
        MASF A+SAT+PKL  AGS+++  PW SK FVS  PRH SSQ   AAADGAA AVKR  EK+AE+VKDK VS+AEEV++KTK+ AGKVSETAQDMAGKAK
Subjt:  MASFFASSATIPKLHEAGSLLLKTPWISKAFVSHTPRHASSQAGVAAADGAAHAVKREAEKSAEKVKDKVVSSAEEVSEKTKEAAGKVSETAQDMAGKAK

Query:  QTVEGAWETVKDTTQSLKEKVVGKVEESKEAIKDTADNLKNNVKSNC
        QTVE AW +VKDTTQ++KEKVVGK EESKEAIKDTA+N+KNN+KSNC
Subjt:  QTVEGAWETVKDTTQSLKEKVVGKVEESKEAIKDTADNLKNNVKSNC

XP_011659168.1 uncharacterized protein At4g13230 [Cucumis sativus]7.1e-4570.75Show/hide
Query:  MASFFASSATIPKLHEAGSLLLKTPWISKAFVSHTPRHASSQAGVAAADGAAHAVKREAEKSAEKVKDKVVSSAEEVSEKTKEAAGKVSETAQDMAGKAK
        MASF A+SATIPKL  AGS+++  PW S  FVS  PRH SSQ   AAAD AAH VKR  E++AE+VKDK VS+A+EV+++TKE AGKVSETAQDMAGKAK
Subjt:  MASFFASSATIPKLHEAGSLLLKTPWISKAFVSHTPRHASSQAGVAAADGAAHAVKREAEKSAEKVKDKVVSSAEEVSEKTKEAAGKVSETAQDMAGKAK

Query:  QTVEGAWETVKDTTQSLKEKVVGKVEESKEAIKDTADNLKNNVKSNC
        QTVE AW +VKDTTQ++K+KVVGK EESKEAIKDTA+N+K N+KSNC
Subjt:  QTVEGAWETVKDTTQSLKEKVVGKVEESKEAIKDTADNLKNNVKSNC

XP_022152517.1 uncharacterized protein At4g13230 [Momordica charantia]8.6e-4370.47Show/hide
Query:  MASFFASSATIPKLHEAGSLLLKTPWISKAFVSHTPRHASSQ--AGVAAADGAAHAVKREAEKSAEKVKDKVVSSAEEVSEKTKEAAGKVSETAQDMAGK
        MAS  AS+ATI KL+ AGS+L+++PW S+ FVS  PRHASS   A  AAADGAA  VKR  EK+AE+VKDK  S+AEEV++KTKE AGKVSETAQD+AGK
Subjt:  MASFFASSATIPKLHEAGSLLLKTPWISKAFVSHTPRHASSQ--AGVAAADGAAHAVKREAEKSAEKVKDKVVSSAEEVSEKTKEAAGKVSETAQDMAGK

Query:  AKQTVEGAWETVKDTTQSLKEKVVGKVEESKEAIKDTADNLKNNVKSNC
        AKQTV+ AW +VKDTTQ++KEKVVGK EESKEAIKDTADN+K+ +KSNC
Subjt:  AKQTVEGAWETVKDTTQSLKEKVVGKVEESKEAIKDTADNLKNNVKSNC

XP_038897424.1 uncharacterized protein At4g13230 [Benincasa hispida]4.1e-4571.43Show/hide
Query:  MASFFASSATIPKLHEAGSLLLKTPWISKAFVSHTPRHASSQAGVAAADGAAHAVKREAEKSAEKVKDKVVSSAEEVSEKTKEAAGKVSETAQDMAGKAK
        MASF A SAT+PKLH A S+ ++TPW SK FVS  P+H SS+   AAADGAA  VKR  EK+AE VKDK VS+A+EV++KTKE AGKVSETAQD+AGKAK
Subjt:  MASFFASSATIPKLHEAGSLLLKTPWISKAFVSHTPRHASSQAGVAAADGAAHAVKREAEKSAEKVKDKVVSSAEEVSEKTKEAAGKVSETAQDMAGKAK

Query:  QTVEGAWETVKDTTQSLKEKVVGKVEESKEAIKDTADNLKNNVKSNC
        QTV+ AW +VKDTTQ++KEKVVGK EESKEAIKDTADNLK N+K+NC
Subjt:  QTVEGAWETVKDTTQSLKEKVVGKVEESKEAIKDTADNLKNNVKSNC

TrEMBL top hitse value%identityAlignment
A0A0A0K9U4 Uncharacterized protein3.4e-4570.75Show/hide
Query:  MASFFASSATIPKLHEAGSLLLKTPWISKAFVSHTPRHASSQAGVAAADGAAHAVKREAEKSAEKVKDKVVSSAEEVSEKTKEAAGKVSETAQDMAGKAK
        MASF A+SATIPKL  AGS+++  PW S  FVS  PRH SSQ   AAAD AAH VKR  E++AE+VKDK VS+A+EV+++TKE AGKVSETAQDMAGKAK
Subjt:  MASFFASSATIPKLHEAGSLLLKTPWISKAFVSHTPRHASSQAGVAAADGAAHAVKREAEKSAEKVKDKVVSSAEEVSEKTKEAAGKVSETAQDMAGKAK

Query:  QTVEGAWETVKDTTQSLKEKVVGKVEESKEAIKDTADNLKNNVKSNC
        QTVE AW +VKDTTQ++K+KVVGK EESKEAIKDTA+N+K N+KSNC
Subjt:  QTVEGAWETVKDTTQSLKEKVVGKVEESKEAIKDTADNLKNNVKSNC

A0A1Q3BS03 Uncharacterized protein (Fragment)3.4e-2152.99Show/hide
Query:  SLLLKTPWISKAFVSHTPR--HASS--QAGVAAADGAAHAVKR---EAEKSAEKVKDKVVSSAEEVSEKTKEAAGKVSETAQDMAGKAKQTVEGAWETVK
        ++L++ PW S+ FV  T R  HAS   Q   +A D A  A K+   EA+K+ E VKDK  S+AE+V++K ++AA KV ETAQD+  KAKQTV+ AW +VK
Subjt:  SLLLKTPWISKAFVSHTPR--HASS--QAGVAAADGAAHAVKR---EAEKSAEKVKDKVVSSAEEVSEKTKEAAGKVSETAQDMAGKAKQTVEGAWETVK

Query:  DTTQSLKEKVVGKVEESKEAIKDTADNLKNNVKS
        DTT  +K+ VVGK EESKE+IK+TA+N+K NVK+
Subjt:  DTTQSLKEKVVGKVEESKEAIKDTADNLKNNVKS

A0A1S3C7D4 uncharacterized protein At4g132301.8e-4674.15Show/hide
Query:  MASFFASSATIPKLHEAGSLLLKTPWISKAFVSHTPRHASSQAGVAAADGAAHAVKREAEKSAEKVKDKVVSSAEEVSEKTKEAAGKVSETAQDMAGKAK
        MASF A+SAT+PKL  AGS+++  PW SK FVS  PRH SSQ   AAADGAA AVKR  EK+AE+VKDK VS+AEEV++KTK+ AGKVSETAQDMAGKAK
Subjt:  MASFFASSATIPKLHEAGSLLLKTPWISKAFVSHTPRHASSQAGVAAADGAAHAVKREAEKSAEKVKDKVVSSAEEVSEKTKEAAGKVSETAQDMAGKAK

Query:  QTVEGAWETVKDTTQSLKEKVVGKVEESKEAIKDTADNLKNNVKSNC
        QTVE AW +VKDTTQ++KEKVVGK EESKEAIKDTA+N+KNN+KSNC
Subjt:  QTVEGAWETVKDTTQSLKEKVVGKVEESKEAIKDTADNLKNNVKSNC

A0A6J1DGG7 uncharacterized protein At4g132304.2e-4370.47Show/hide
Query:  MASFFASSATIPKLHEAGSLLLKTPWISKAFVSHTPRHASSQ--AGVAAADGAAHAVKREAEKSAEKVKDKVVSSAEEVSEKTKEAAGKVSETAQDMAGK
        MAS  AS+ATI KL+ AGS+L+++PW S+ FVS  PRHASS   A  AAADGAA  VKR  EK+AE+VKDK  S+AEEV++KTKE AGKVSETAQD+AGK
Subjt:  MASFFASSATIPKLHEAGSLLLKTPWISKAFVSHTPRHASSQ--AGVAAADGAAHAVKREAEKSAEKVKDKVVSSAEEVSEKTKEAAGKVSETAQDMAGK

Query:  AKQTVEGAWETVKDTTQSLKEKVVGKVEESKEAIKDTADNLKNNVKSNC
        AKQTV+ AW +VKDTTQ++KEKVVGK EESKEAIKDTADN+K+ +KSNC
Subjt:  AKQTVEGAWETVKDTTQSLKEKVVGKVEESKEAIKDTADNLKNNVKSNC

B9S570 Uncharacterized protein7.7e-2147.02Show/hide
Query:  MASFFASSATIPKLHEAGSLLLKTPWISKAFVSHTPRH---ASSQAGVAAADGAAHAVKR---EAEKSAEKVKDKVVSSAEEVSEKTKEAAGKVSETAQD
        MAS  + +  IPK  + G+L++K+PW S+ F+  T RH    +      A D A+ A K+   EA+   E VK+K  S+AE+VS+K KE AG+ S+TAQD
Subjt:  MASFFASSATIPKLHEAGSLLLKTPWISKAFVSHTPRH---ASSQAGVAAADGAAHAVKR---EAEKSAEKVKDKVVSSAEEVSEKTKEAAGKVSETAQD

Query:  MAGKAKQTVEGAWETVKDTTQSLKEKVVGKVEESKEAIKDTADNLKNNVKS
        +  KAKQTVEGAW +VKDTTQ +K+  VG  EESKE +K+ AD++K ++ S
Subjt:  MAGKAKQTVEGAWETVKDTTQSLKEKVVGKVEESKEAIKDTADNLKNNVKS

SwissProt top hitse value%identityAlignment
Q8LFD5 Uncharacterized protein At4g132309.4e-0840.24Show/hide
Query:  EKVKDKVVSSAEEVSEKTKEAAGKVSETAQDMAGKAKQTVEGAWETVKDTTQSLKEKVVGKVEESKEAIKDTADNLKNNVKS
        + V DK   + ++V++K  E A  +S+ A ++  KAK T E AW+ VKDTT+ +K+ V GK EE+KE+IK TA  ++ ++ +
Subjt:  EKVKDKVVSSAEEVSEKTKEAAGKVSETAQDMAGKAKQTVEGAWETVKDTTQSLKEKVVGKVEESKEAIKDTADNLKNNVKS

Arabidopsis top hitse value%identityAlignment
AT4G13230.1 Late embryogenesis abundant protein (LEA) family protein6.7e-0940.24Show/hide
Query:  EKVKDKVVSSAEEVSEKTKEAAGKVSETAQDMAGKAKQTVEGAWETVKDTTQSLKEKVVGKVEESKEAIKDTADNLKNNVKS
        + V DK   + ++V++K  E A  +S+ A ++  KAK T E AW+ VKDTT+ +K+ V GK EE+KE+IK TA  ++ ++ +
Subjt:  EKVKDKVVSSAEEVSEKTKEAAGKVSETAQDMAGKAKQTVEGAWETVKDTTQSLKEKVVGKVEESKEAIKDTADNLKNNVKS

AT5G44310.1 Late embryogenesis abundant protein (LEA) family protein4.5e-0538.71Show/hide
Query:  DGAAHAVKREAEKSAEKVKDKVVSSAEEVSEKTKEAAGKVSETAQDMAGKAKQTVEGAWETVKDTTQSLKEKVVGKVEESKEAIKDTADNLKN
        D       R A+K AE+ KDK    AE+  EK ++ A    E AQD+  K   TV+  WET K T Q + E VVG  EE+ +A  D    L++
Subjt:  DGAAHAVKREAEKSAEKVKDKVVSSAEEVSEKTKEAAGKVSETAQDMAGKAKQTVEGAWETVKDTTQSLKEKVVGKVEESKEAIKDTADNLKN

AT5G44310.2 Late embryogenesis abundant protein (LEA) family protein4.5e-0538.71Show/hide
Query:  DGAAHAVKREAEKSAEKVKDKVVSSAEEVSEKTKEAAGKVSETAQDMAGKAKQTVEGAWETVKDTTQSLKEKVVGKVEESKEAIKDTADNLKN
        D       R A+K AE+ KDK    AE+  EK ++ A    E AQD+  K   TV+  WET K T Q + E VVG  EE+ +A  D    L++
Subjt:  DGAAHAVKREAEKSAEKVKDKVVSSAEEVSEKTKEAAGKVSETAQDMAGKAKQTVEGAWETVKDTTQSLKEKVVGKVEESKEAIKDTADNLKN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAGCTTCTTTGCCTCATCAGCAACTATCCCGAAGCTTCATGAAGCTGGATCTCTTCTTCTCAAAACCCCATGGATTTCTAAGGCTTTTGTCTCTCACACACCAAG
ACATGCAAGTTCACAGGCCGGGGTTGCAGCAGCTGATGGAGCTGCTCATGCGGTGAAGCGAGAAGCGGAGAAGAGTGCCGAAAAGGTCAAAGACAAGGTTGTTTCTTCCG
CCGAAGAGGTAAGTGAAAAAACAAAGGAAGCAGCGGGAAAAGTGTCTGAAACAGCACAGGATATGGCTGGGAAGGCAAAGCAGACAGTGGAAGGGGCATGGGAAACAGTG
AAGGATACAACTCAAAGCCTCAAGGAGAAGGTGGTTGGCAAAGTGGAGGAATCTAAAGAAGCCATCAAAGACACTGCTGACAATCTCAAAAACAATGTTAAGTCCAACTG
TTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAAGCTTCTTTGCCTCATCAGCAACTATCCCGAAGCTTCATGAAGCTGGATCTCTTCTTCTCAAAACCCCATGGATTTCTAAGGCTTTTGTCTCTCACACACCAAG
ACATGCAAGTTCACAGGCCGGGGTTGCAGCAGCTGATGGAGCTGCTCATGCGGTGAAGCGAGAAGCGGAGAAGAGTGCCGAAAAGGTCAAAGACAAGGTTGTTTCTTCCG
CCGAAGAGGTAAGTGAAAAAACAAAGGAAGCAGCGGGAAAAGTGTCTGAAACAGCACAGGATATGGCTGGGAAGGCAAAGCAGACAGTGGAAGGGGCATGGGAAACAGTG
AAGGATACAACTCAAAGCCTCAAGGAGAAGGTGGTTGGCAAAGTGGAGGAATCTAAAGAAGCCATCAAAGACACTGCTGACAATCTCAAAAACAATGTTAAGTCCAACTG
TTGA
Protein sequenceShow/hide protein sequence
MASFFASSATIPKLHEAGSLLLKTPWISKAFVSHTPRHASSQAGVAAADGAAHAVKREAEKSAEKVKDKVVSSAEEVSEKTKEAAGKVSETAQDMAGKAKQTVEGAWETV
KDTTQSLKEKVVGKVEESKEAIKDTADNLKNNVKSNC