; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0011988 (gene) of Chayote v1 genome

Gene IDSed0011988
OrganismSechium edule (Chayote v1)
DescriptionLeucine-rich repeat protein kinase family protein
Genome locationLG14:23521029..23522022
RNA-Seq ExpressionSed0011988
SyntenySed0011988
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647723.1 hypothetical protein Csa_003961 [Cucumis sativus]1.0e-2466.02Show/hide
Query:  MSIPKLPFSHSDIIDTSNSSPKSVQKVPKSTSDKLLQKFFDATEFGFDYEKSGIWSPPLQRSVYLSSSGQVFDQTDLLRKLETLLSSRRRREKRRFKCRV
        MSIP+LPF        S S+PK VQ+V KSTSD+LLQKFFDATEFGFDYE+SG+WSPPLQR+VYL+SSGQV +QTDL  KL+T+L+SR R  K  FK R 
Subjt:  MSIPKLPFSHSDIIDTSNSSPKSVQKVPKSTSDKLLQKFFDATEFGFDYEKSGIWSPPLQRSVYLSSSGQVFDQTDLLRKLETLLSSRRRREKRRFKCRV

Query:  FWC
          C
Subjt:  FWC

KAG6581370.1 hypothetical protein SDJN03_21372, partial [Cucurbita argyrosperma subsp. sororia]1.4e-3474.31Show/hide
Query:  MSIPKLPFSHSDIIDTSNSSPKSVQKVPKSTSDKLLQKFFDATEFGFDYEKSGIWSPPLQRSVYLSSSGQVFDQTDLLRKLETLLSSRRRREKR-RFKCR
        MSIP+LPFS S+ I TS++   +VQKV K+TSD+LLQKFFDATEFGFDYE+SG+WSPPLQRSVYLS+SG+VF+Q DL RKLE++LSSRR+RE++ RFK R
Subjt:  MSIPKLPFSHSDIIDTSNSSPKSVQKVPKSTSDKLLQKFFDATEFGFDYEKSGIWSPPLQRSVYLSSSGQVFDQTDLLRKLETLLSSRRRREKR-RFKCR

Query:  VFWCSVRQI
        VFWCSVRQI
Subjt:  VFWCSVRQI

KAG7026513.1 hypothetical protein SDJN02_10515, partial [Cucurbita argyrosperma subsp. argyrosperma]4.7e-2270.59Show/hide
Query:  TSNSSPKSVQKVPKSTSDKLLQKFFDATEFGFDYEKSGIWSPPLQRSVYLSSSGQVFDQTDLLRKLETLLSS-RRRREKRRFKCR
        ++ ++PK VQ+VPKSTSD+LLQKF DATEFGFDY+ SG+WSPPLQR+VYLSSSG+VF+ TDL RKLE +LSS R RRE   FK R
Subjt:  TSNSSPKSVQKVPKSTSDKLLQKFFDATEFGFDYEKSGIWSPPLQRSVYLSSSGQVFDQTDLLRKLETLLSS-RRRREKRRFKCR

KAG7034657.1 hypothetical protein SDJN02_04387 [Cucurbita argyrosperma subsp. argyrosperma]2.0e-2872Show/hide
Query:  MSIPKLPFSHSDIIDTSNSSPKSVQKVPKSTSDKLLQKFFDATEFGFDYEKSGIWSPPLQRSVYLSSSGQVFDQTDLLRKLETLLSSRRRREKR-RFKCR
        MSIP+LPFS S+ I TS++   +VQKV K+TSD+LLQKFFDATEFGFDYE+SG+WSPPLQRSVYLS+SG+VF+Q DL RKLE++LSSRR+RE++ RFK R
Subjt:  MSIPKLPFSHSDIIDTSNSSPKSVQKVPKSTSDKLLQKFFDATEFGFDYEKSGIWSPPLQRSVYLSSSGQVFDQTDLLRKLETLLSSRRRREKR-RFKCR

XP_038892892.1 uncharacterized protein LOC120081796 [Benincasa hispida]9.8e-3676.42Show/hide
Query:  MSIPKLPFSHSDIIDTSNSSPKSVQKVPKSTSDKLLQKFFDATEFGFDYEKSGIWSPPLQRSVYLSSSGQVFDQTDLLRKLETLLSSRRRREKRRFKCRV
        MSIP+LPFS S+ I TSN++   VQ+V KSTSD+LLQKFFDATEFGFDYE SG+WSPPLQRSVYLSSSGQVF+QTDL  KL+T+L+SRRRR K  FK RV
Subjt:  MSIPKLPFSHSDIIDTSNSSPKSVQKVPKSTSDKLLQKFFDATEFGFDYEKSGIWSPPLQRSVYLSSSGQVFDQTDLLRKLETLLSSRRRREKRRFKCRV

Query:  FWCSVR
        FWCSVR
Subjt:  FWCSVR

TrEMBL top hitse value%identityAlignment
A0A0A0KLQ8 Uncharacterized protein1.1e-2968.52Show/hide
Query:  MSIPKLPFSHSDIIDTSNSSPKSVQKVPKSTSDKLLQKFFDATEFGFDYEKSGIWSPPLQRSVYLSSSGQVFDQTDLLRKLETLLSSRRRREKRRFKCRV
        MSIP+LPF        S S+PK VQ+V KSTSD+LLQKFFDATEFGFDYE+SG+WSPPLQR+VYL+SSGQV +QTDL  KL+T+L+SR R  K  FK RV
Subjt:  MSIPKLPFSHSDIIDTSNSSPKSVQKVPKSTSDKLLQKFFDATEFGFDYEKSGIWSPPLQRSVYLSSSGQVFDQTDLLRKLETLLSSRRRREKRRFKCRV

Query:  FWCSVRQI
        FWC V+QI
Subjt:  FWCSVRQI

A0A2P5FDI0 Uncharacterized protein9.0e-1955.79Show/hide
Query:  SHSDIIDTSNSSPKSVQKVPKSTSDKLLQKFFDATEFGFDYEKSGIWSPPLQRSVYLSSSGQVFDQTDLLRKLETLLSSRRRREKRRFKCRVFWC
        S S    + NSSP  VQ V KSTSD +L KFFDATEF FDYE+SG+WSPP++RSV+LSS G++F   ++L KL TL+ +R  R  + F  R FWC
Subjt:  SHSDIIDTSNSSPKSVQKVPKSTSDKLLQKFFDATEFGFDYEKSGIWSPPLQRSVYLSSSGQVFDQTDLLRKLETLLSSRRRREKRRFKCRVFWC

A0A314YAR0 Uncharacterized protein6.9e-1959.26Show/hide
Query:  VQKVPKSTSDKLLQKFFDATEFGFDYEKSGIWSPPLQRSVYLSSSGQVFDQTDLLRKLETLLSSRRRREKRRFKCRVFWCS
        VQ VPKSTSD+LLQKFFDA EF FDYE+SG+WSPP++R+V+LSS G++F + ++L KL TL+ +     K +  CR FWCS
Subjt:  VQKVPKSTSDKLLQKFFDATEFGFDYEKSGIWSPPLQRSVYLSSSGQVFDQTDLLRKLETLLSSRRRREKRRFKCRVFWCS

A0A314ZRE6 Uncharacterized protein6.9e-1959.26Show/hide
Query:  VQKVPKSTSDKLLQKFFDATEFGFDYEKSGIWSPPLQRSVYLSSSGQVFDQTDLLRKLETLLSSRRRREKRRFKCRVFWCS
        VQ VPKSTSD+LLQKFFDA EF FDYE+SG+WSPP++R+V+LSS G++F + ++L KL TL+ +     K +  CR FWCS
Subjt:  VQKVPKSTSDKLLQKFFDATEFGFDYEKSGIWSPPLQRSVYLSSSGQVFDQTDLLRKLETLLSSRRRREKRRFKCRVFWCS

A0A6P5SBA8 uncharacterized protein LOC110756101 isoform X16.9e-1959.26Show/hide
Query:  VQKVPKSTSDKLLQKFFDATEFGFDYEKSGIWSPPLQRSVYLSSSGQVFDQTDLLRKLETLLSSRRRREKRRFKCRVFWCS
        VQ VPKSTSD+LLQKFFDA EF FDYE+SG+WSPP++R+V+LSS G++F + ++L KL TL+ +     K +  CR FWCS
Subjt:  VQKVPKSTSDKLLQKFFDATEFGFDYEKSGIWSPPLQRSVYLSSSGQVFDQTDLLRKLETLLSSRRRREKRRFKCRVFWCS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCATCCCCAAGCTGCCATTTTCACATTCTGATATCATTGACACTTCCAATTCTTCTCCAAAATCAGTTCAAAAAGTACCCAAATCAACCTCAGACAAATTGCTTCA
GAAATTCTTTGATGCCACAGAATTTGGATTTGATTATGAGAAAAGTGGCATTTGGTCTCCCCCTCTTCAACGCAGTGTTTATTTGAGCTCTTCTGGTCAAGTTTTCGACC
AAACGGATTTGCTTAGAAAGCTTGAAACTTTGCTGAGTTCTCGCCGGAGAAGAGAAAAACGGCGTTTCAAGTGTAGAGTGTTTTGGTGCTCTGTGAGGCAAATTTGA
mRNA sequenceShow/hide mRNA sequence
CAAAATTTCAGCTAAGTTAAGTTTCTTCTTTCCCCATTTGAAATTCTCCCCTGTTGTTCTCTTGAAATCTCTGATGTCACATTGTCCAATTGGGCCATAAAGCTCTGTTT
CCCTTGTTCAATCCATCATTAATTAGCCACTCTTTTCAAATCTGACTCAAATTCAAACCCCCAATTACTCAACCATTCAAAAACAAAATTCTTTTCCTTTTCAACACCTT
TGCCGCTCTAATTTCTTCATCTCAGCAATGTCACTATTCTAAAGTTTCCAATTTGTCCTGACCCAACAACTCTATTATTATCATTATTAATTAATCAAAACATTACTCAA
AGCAATACACCCTGGCCCTGAATGAAGGAACATCTTTTAAATTAACATTTTTTGTCTTCTTCAAATCCAAATCCTCCTCTTTATATTCATTTTTTTCAAAAGGGTTCTTC
CAAAGTCCATCCATGTCCATCCCCAAGCTGCCATTTTCACATTCTGATATCATTGACACTTCCAATTCTTCTCCAAAATCAGTTCAAAAAGTACCCAAATCAACCTCAGA
CAAATTGCTTCAGAAATTCTTTGATGCCACAGAATTTGGATTTGATTATGAGAAAAGTGGCATTTGGTCTCCCCCTCTTCAACGCAGTGTTTATTTGAGCTCTTCTGGTC
AAGTTTTCGACCAAACGGATTTGCTTAGAAAGCTTGAAACTTTGCTGAGTTCTCGCCGGAGAAGAGAAAAACGGCGTTTCAAGTGTAGAGTGTTTTGGTGCTCTGTGAGG
CAAATTTGAAAGGTGGAATCTTTGATAATGGGGTTTTATCAGTTGGAGGGGGGCTAAACTCAATCTTATACAGTTCTTACTTTGTAGAAGTTTTATAGTTGATATTAATT
AACCAATTTGTTGCTG
Protein sequenceShow/hide protein sequence
MSIPKLPFSHSDIIDTSNSSPKSVQKVPKSTSDKLLQKFFDATEFGFDYEKSGIWSPPLQRSVYLSSSGQVFDQTDLLRKLETLLSSRRRREKRRFKCRVFWCSVRQI