; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0011995 (gene) of Chayote v1 genome

Gene IDSed0011995
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG01:4027830..4028578
RNA-Seq ExpressionSed0011995
SyntenySed0011995
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057288.1 hypothetical protein E6C27_scaffold280G001290 [Cucumis melo var. makuwa]2.5e-1547.77Show/hide
Query:  MGRNSKSSRRN-PVCEKLLKALGL--YPKIIKFDPPPP------PQEEAKPVGLEIHDCEVEVEKKQKADRFTKISDAKKEGKKSGEDVNDVFSDYINRA
        MGRN KSS  N P CEKLLKA G+   PKI K  P          Q+      + +H     +E K      T  S + K G    + VNDVFS+YINRA
Subjt:  MGRNSKSSRRN-PVCEKLLKALGL--YPKIIKFDPPPP------PQEEAKPVGLEIHDCEVEVEKKQKADRFTKISDAKKEGKKSGEDVNDVFSDYINRA

Query:  KRRLGSLSSKRH---DPSSRGKENA--KEDNRFSEYIVRARNKLNAASSSRTL-KTK
        KRRLG+++SK+H   D S +GKEN+   ED RFS+YI RAR+KL A SSS  L KTK
Subjt:  KRRLGSLSSKRH---DPSSRGKENA--KEDNRFSEYIVRARNKLNAASSSRTL-KTK

KAG6571440.1 hypothetical protein SDJN03_28168, partial [Cucurbita argyrosperma subsp. sororia]1.9e-2351.47Show/hide
Query:  MGRNSKSSRRNPVCEKLLKALGLYPKIIKFDPPPPPQEEAKPVGLEIHDCEVEVEKKQKADRFTKISDAKKEGKKSGEDVNDVFSDYINRAKRRLGSLSS
        MG+N+KSS+R+ VCE+ LKALG+ P   + + P  P                E++KKQ+ +    I+ A +  KK   + ND FSDYINRAKRRLGS+SS
Subjt:  MGRNSKSSRRNPVCEKLLKALGLYPKIIKFDPPPPPQEEAKPVGLEIHDCEVEVEKKQKADRFTKISDAKKEGKKSGEDVNDVFSDYINRAKRRLGSLSS

Query:  KRHDPSSRGKENAKEDNRFSEYIVRARNKLNAASSS
        KRHDPSS+GKEN KED RF++YI+RARN+L A SS+
Subjt:  KRHDPSSRGKENAKEDNRFSEYIVRARNKLNAASSS

KAG6606435.1 hypothetical protein SDJN03_03752, partial [Cucurbita argyrosperma subsp. sororia]8.9e-3766.91Show/hide
Query:  MGRNSKSSRRNPVCEKLLKALGLYPKIIKFDPPPPPQEEAKPVGLEIHDCEVEVEKKQKADRFTKISDAKKEGKKSGEDVNDVFSDYINRAKRRLGSLSS
        MGRNSKSS+RNPVCEKLLKALGLYP+I+KF PPP  QEE KP  L  H   ++++            D  ++ +K  EDVNDVFSDYI+RAKRRLGS+SS
Subjt:  MGRNSKSSRRNPVCEKLLKALGLYPKIIKFDPPPPPQEEAKPVGLEIHDCEVEVEKKQKADRFTKISDAKKEGKKSGEDVNDVFSDYINRAKRRLGSLSS

Query:  KRHDPSSRGKENAKEDNRFSEYIVRARNKLNAASSS
        KRHD SSRGKEN KEDNRFS+YIVRARNKL A SSS
Subjt:  KRHDPSSRGKENAKEDNRFSEYIVRARNKLNAASSS

KGN47879.1 hypothetical protein Csa_004306 [Cucumis sativus]4.0e-1347.33Show/hide
Query:  MGRNSKSSRRN-PVCEKLLKALGL--YPKIIKFDPPPPPQEEAKPVGLEIHDCEVEVEKKQKADRFTKISDAKKEGKKSGEDVNDVFSDYINRAKRRLGS
        MG+NSKSS  N P CEKLLKA G+   PKI K        E             + V  +      T  S   K      + VN  FS+YINRAKRRL +
Subjt:  MGRNSKSSRRN-PVCEKLLKALGL--YPKIIKFDPPPPPQEEAKPVGLEIHDCEVEVEKKQKADRFTKISDAKKEGKKSGEDVNDVFSDYINRAKRRLGS

Query:  LSSKRH--DPSSRGKEN--AKEDNRFSEYIVRARNKLNAASSSRTL-KTK
        ++SK+H  D SSRGKEN    ED RFS+YIVRARNKL + SSS  L KTK
Subjt:  LSSKRH--DPSSRGKEN--AKEDNRFSEYIVRARNKLNAASSSRTL-KTK

TrEMBL top hitse value%identityAlignment
A0A0A0KG94 Uncharacterized protein2.0e-1347.33Show/hide
Query:  MGRNSKSSRRN-PVCEKLLKALGL--YPKIIKFDPPPPPQEEAKPVGLEIHDCEVEVEKKQKADRFTKISDAKKEGKKSGEDVNDVFSDYINRAKRRLGS
        MG+NSKSS  N P CEKLLKA G+   PKI K        E             + V  +      T  S   K      + VN  FS+YINRAKRRL +
Subjt:  MGRNSKSSRRN-PVCEKLLKALGL--YPKIIKFDPPPPPQEEAKPVGLEIHDCEVEVEKKQKADRFTKISDAKKEGKKSGEDVNDVFSDYINRAKRRLGS

Query:  LSSKRH--DPSSRGKEN--AKEDNRFSEYIVRARNKLNAASSSRTL-KTK
        ++SK+H  D SSRGKEN    ED RFS+YIVRARNKL + SSS  L KTK
Subjt:  LSSKRH--DPSSRGKEN--AKEDNRFSEYIVRARNKLNAASSSRTL-KTK

A0A5D3CQZ7 Uncharacterized protein1.2e-1547.77Show/hide
Query:  MGRNSKSSRRN-PVCEKLLKALGL--YPKIIKFDPPPP------PQEEAKPVGLEIHDCEVEVEKKQKADRFTKISDAKKEGKKSGEDVNDVFSDYINRA
        MGRN KSS  N P CEKLLKA G+   PKI K  P          Q+      + +H     +E K      T  S + K G    + VNDVFS+YINRA
Subjt:  MGRNSKSSRRN-PVCEKLLKALGL--YPKIIKFDPPPP------PQEEAKPVGLEIHDCEVEVEKKQKADRFTKISDAKKEGKKSGEDVNDVFSDYINRA

Query:  KRRLGSLSSKRH---DPSSRGKENA--KEDNRFSEYIVRARNKLNAASSSRTL-KTK
        KRRLG+++SK+H   D S +GKEN+   ED RFS+YI RAR+KL A SSS  L KTK
Subjt:  KRRLGSLSSKRH---DPSSRGKENA--KEDNRFSEYIVRARNKLNAASSSRTL-KTK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAGGAACTCGAAATCATCCCGGCGCAATCCCGTGTGCGAAAAGCTTCTTAAGGCTCTTGGTTTGTATCCTAAAATCATCAAATTTGATCCTCCTCCTCCTCCTCA
GGAAGAAGCCAAACCAGTTGGTTTGGAAATTCATGATTGTGAAGTGGAGGTTGAGAAGAAGCAAAAGGCTGACAGGTTTACTAAAATTAGTGATGCAAAAAAGGAAGGGA
AAAAATCAGGAGAAGATGTGAACGACGTGTTTAGCGATTACATTAATCGAGCTAAACGTAGGTTGGGAAGCCTATCGAGCAAGCGACATGATCCGAGTAGCCGGGGAAAA
GAGAATGCGAAAGAAGATAATCGCTTTTCGGAATATATCGTTCGAGCTAGGAATAAGCTGAATGCTGCATCCTCCTCCCGAACTTTAAAGACAAAGTGA
mRNA sequenceShow/hide mRNA sequence
GTGTTTCTTCCCCAACACAAACACCAATAGCAATGGGAAGGAACTCGAAATCATCCCGGCGCAATCCCGTGTGCGAAAAGCTTCTTAAGGCTCTTGGTTTGTATCCTAAA
ATCATCAAATTTGATCCTCCTCCTCCTCCTCAGGAAGAAGCCAAACCAGTTGGTTTGGAAATTCATGATTGTGAAGTGGAGGTTGAGAAGAAGCAAAAGGCTGACAGGTT
TACTAAAATTAGTGATGCAAAAAAGGAAGGGAAAAAATCAGGAGAAGATGTGAACGACGTGTTTAGCGATTACATTAATCGAGCTAAACGTAGGTTGGGAAGCCTATCGA
GCAAGCGACATGATCCGAGTAGCCGGGGAAAAGAGAATGCGAAAGAAGATAATCGCTTTTCGGAATATATCGTTCGAGCTAGGAATAAGCTGAATGCTGCATCCTCCTCC
CGAACTTTAAAGACAAAGTGAGACAGCATCAGCACACTACCTCTGCTTTGCTCTGTCCAACATATGCTTTATGTCTTTCATTTTACTTTCTAGTTTGCATCTTCATTTTA
TGTTTCATGTATTTTACCATTGATCTTGCTCAATTTTCTCTCCTCTAAACTTTTTTAAATAAATTTTGATGAGTTGCTAATGAAGGTTCTTATTCCTCAGTGTGTAGTAT
AGTTGTCCATGAATGCCCACTGTTTTGTTTCCATCCCAAGAGAGAAGATTTGTATTTTTGTGTTTGGTTTTAATGAAATTTATTGTGTA
Protein sequenceShow/hide protein sequence
MGRNSKSSRRNPVCEKLLKALGLYPKIIKFDPPPPPQEEAKPVGLEIHDCEVEVEKKQKADRFTKISDAKKEGKKSGEDVNDVFSDYINRAKRRLGSLSSKRHDPSSRGK
ENAKEDNRFSEYIVRARNKLNAASSSRTLKTK