; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0012011 (gene) of Chayote v1 genome

Gene IDSed0012011
OrganismSechium edule (Chayote v1)
Descriptionglycine-rich RNA-binding protein-like
Genome locationLG05:44555828..44557515
RNA-Seq ExpressionSed0012011
SyntenySed0012011
Gene Ontology termsGO:0006886 - intracellular protein transport (biological process)
GO:0006888 - endoplasmic reticulum to Golgi vesicle-mediated transport (biological process)
GO:0006890 - retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum (biological process)
GO:0006891 - intra-Golgi vesicle-mediated transport (biological process)
GO:0000139 - Golgi membrane (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0030126 - COPI vesicle coat (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0005198 - structural molecule activity (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605080.1 hypothetical protein SDJN03_02397, partial [Cucurbita argyrosperma subsp. sororia]5.7e-5185.63Show/hide
Query:  MASSSVEYRCFVGGLAWATDNQALETAFSGFGEIVEAKVVNDRETGRSRGFGFVTFVDEEAMKTAIESMNGQNLDGRSITVNEAQQRGGGG-----YRGG
        MASSSVEYRCFVGGLAWATDN ALE AFS FGEIVEAK+VNDRETGRSRGFGFVTFVDEEAM++AIE+MNGQNLDGRSITVNEAQQRGGGG      RGG
Subjt:  MASSSVEYRCFVGGLAWATDNQALETAFSGFGEIVEAKVVNDRETGRSRGFGFVTFVDEEAMKTAIESMNGQNLDGRSITVNEAQQRGGGG-----YRGG

Query:  GGGGGYGGRREGGGGGGYSRGGGGYGGGGGGYGGGGGYGGGRDRGYGGGGGGYGGRRD----GGGGGSEGGWRS
        GGGGGYGGRRE GGGGGY+RGGGGYGGGGGGY GGGGYGGGRDRGYGGGGG  GGR      GGGGGSEGGWR+
Subjt:  GGGGGYGGRREGGGGGGYSRGGGGYGGGGGGYGGGGGYGGGRDRGYGGGGGGYGGRRD----GGGGGSEGGWRS

XP_022943401.1 glycine-rich RNA-binding protein-like [Cucurbita moschata]4.8e-5082.76Show/hide
Query:  MASSSVEYRCFVGGLAWATDNQALETAFSGFGEIVEAKVVNDRETGRSRGFGFVTFVDEEAMKTAIESMNGQNLDGRSITVNEAQQRGGGG-----YRGG
        MASSSVEYRCFVGGLAWATDN ALE AFS FGEIVEAK+VNDRETGRSRGFGFVTFV+E++M++AIE+MNGQNLDGRSITVNEAQQRGGGG       GG
Subjt:  MASSSVEYRCFVGGLAWATDNQALETAFSGFGEIVEAKVVNDRETGRSRGFGFVTFVDEEAMKTAIESMNGQNLDGRSITVNEAQQRGGGG-----YRGG

Query:  GGGGGYGGRREGGGGGGYSRGGGGYGGGGGGYGGGGGYGGGRDRGYGGGGGGYG----GRRDGGGGGSEGGWRS
        GGGGGYGGRREGGGGGGY+RGGGGYGGGGGGY GGGGYGGGRDRGYGGGG G      G   GGGGGSEGGWR+
Subjt:  GGGGGYGGRREGGGGGGYSRGGGGYGGGGGGYGGGGGYGGGRDRGYGGGGGGYG----GRRDGGGGGSEGGWRS

XP_022947194.1 glycine-rich RNA-binding protein 1-like [Cucurbita moschata]4.6e-5386.71Show/hide
Query:  MASSSVEYRCFVGGLAWATDNQALETAFSGFGEIVEAKVVNDRETGRSRGFGFVTFVDEEAMKTAIESMNGQNLDGRSITVNEAQQRGGGG-----YRGG
        MASSSVEYRCFVGGLAWATDN ALE AFS FGEIVEAK+VNDRETGRSRGFGFVTFVDEEAM++AIE+MNGQNLDGRSITVNEAQQRGGGG      RGG
Subjt:  MASSSVEYRCFVGGLAWATDNQALETAFSGFGEIVEAKVVNDRETGRSRGFGFVTFVDEEAMKTAIESMNGQNLDGRSITVNEAQQRGGGG-----YRGG

Query:  GGGGGYGGRREGGGGGGYSRGGGGYGGGGGGYGGGGGYGGGRDRGYGGGGGGYGGRRD---GGGGGSEGGWRS
        GGGGGYGGRRE GGGGGY+RGGGGYGGGGGGY GGGGYGGGRDRGYGGGGGG GGR     GGGGGSEGGWR+
Subjt:  GGGGGYGGRREGGGGGGYSRGGGGYGGGGGGYGGGGGYGGGRDRGYGGGGGGYGGRRD---GGGGGSEGGWRS

XP_023006868.1 glycine-rich RNA-binding protein 1-like isoform X1 [Cucurbita maxima]7.6e-5687.36Show/hide
Query:  MASSSVEYRCFVGGLAWATDNQALETAFSGFGEIVEAKVVNDRETGRSRGFGFVTFVDEEAMKTAIESMNGQNLDGRSITVNEAQQRGGGG------YRG
        MASSSVEYRCFVGGLAWATDN ALE AFS FGEIVEAK+VNDRETGRSRGFGFVTFVDEEAM++AIE+MNGQNLDGRSITVNEAQQRGGGG       RG
Subjt:  MASSSVEYRCFVGGLAWATDNQALETAFSGFGEIVEAKVVNDRETGRSRGFGFVTFVDEEAMKTAIESMNGQNLDGRSITVNEAQQRGGGG------YRG

Query:  GGGGGGYGGRREGGGGGGYSRGGGGYGGGGGGYGGGGGYGGGRDRGYGGGGGGYGGRRD---GGGGGSEGGWRS
        GGGGGGYGGRREGGGGGGY+RGGGGYGGGGGGYGGGGGYGGGRDRGYGGGGGG GGR     GGGGGSEGGWR+
Subjt:  GGGGGGYGGRREGGGGGGYSRGGGGYGGGGGGYGGGGGYGGGRDRGYGGGGGGYGGRRD---GGGGGSEGGWRS

XP_023533100.1 glycine-rich RNA-binding protein 1-like isoform X1 [Cucurbita pepo subsp. pepo]2.5e-5186.05Show/hide
Query:  MASSSVEYRCFVGGLAWATDNQALETAFSGFGEIVEAKVVNDRETGRSRGFGFVTFVDEEAMKTAIESMNGQNLDGRSITVNEAQQRGGGG-----YRGG
        MASSSVEYRCFVGGLAWATDN ALE AFS FGEIVEAK+VNDRETGRSRGFGFVTFVDEEAM++AIE+MNGQNLDGRSITVNEAQQRGGGG      RGG
Subjt:  MASSSVEYRCFVGGLAWATDNQALETAFSGFGEIVEAKVVNDRETGRSRGFGFVTFVDEEAMKTAIESMNGQNLDGRSITVNEAQQRGGGG-----YRGG

Query:  GGGGGYGGRREGGGGGGYSRGGGGYGGGGGGYGGGGGYGGGRDRGYGGGGGGYG--GRRDGGGGGSEGGWRS
        GGGGGYGGRRE GGGGGY+RGGGGYGGGGGGY GGGGYGGGRDRGYGGGGG  G   R  GGGGGSEGGWR+
Subjt:  GGGGGYGGRREGGGGGGYSRGGGGYGGGGGGYGGGGGYGGGRDRGYGGGGGGYG--GRRDGGGGGSEGGWRS

TrEMBL top hitse value%identityAlignment
A0A1S3CE16 glycine-rich RNA-binding protein 1-like1.5e-4982.46Show/hide
Query:  MASSSVEYRCFVGGLAWATDNQALETAFSGFGEIVEAKVVNDRETGRSRGFGFVTFVDEEAMKTAIESMNGQNLDGRSITVNEAQQRGGGGYRG----GG
        MASSSVEYRCFVGGLAWATD+ ALE AFS FG+IVEAK+V+DRETGRSRGFGFVTF +E+AM++AIE+MNG  LDGR+ITVNEAQQRGGGG  G    GG
Subjt:  MASSSVEYRCFVGGLAWATDNQALETAFSGFGEIVEAKVVNDRETGRSRGFGFVTFVDEEAMKTAIESMNGQNLDGRSITVNEAQQRGGGGYRG----GG

Query:  GGGGYGGRREGGGGGGYSRGGGGYGGGGGGYGGGGGYGGGRDRGYGGGGGGYGGR--RDGGGGGSEGGWRS
        GGGGYGGRR+GGGGGG+SRGGGGYGGGGGGYGGGGGYGGGRDRGYGGGGG  GGR  R GGGGGSEGGWR+
Subjt:  GGGGYGGRREGGGGGGYSRGGGGYGGGGGGYGGGGGYGGGRDRGYGGGGGGYGGR--RDGGGGGSEGGWRS

A0A6J1FRL7 glycine-rich RNA-binding protein-like2.3e-5082.76Show/hide
Query:  MASSSVEYRCFVGGLAWATDNQALETAFSGFGEIVEAKVVNDRETGRSRGFGFVTFVDEEAMKTAIESMNGQNLDGRSITVNEAQQRGGGG-----YRGG
        MASSSVEYRCFVGGLAWATDN ALE AFS FGEIVEAK+VNDRETGRSRGFGFVTFV+E++M++AIE+MNGQNLDGRSITVNEAQQRGGGG       GG
Subjt:  MASSSVEYRCFVGGLAWATDNQALETAFSGFGEIVEAKVVNDRETGRSRGFGFVTFVDEEAMKTAIESMNGQNLDGRSITVNEAQQRGGGG-----YRGG

Query:  GGGGGYGGRREGGGGGGYSRGGGGYGGGGGGYGGGGGYGGGRDRGYGGGGGGYG----GRRDGGGGGSEGGWRS
        GGGGGYGGRREGGGGGGY+RGGGGYGGGGGGY GGGGYGGGRDRGYGGGG G      G   GGGGGSEGGWR+
Subjt:  GGGGGYGGRREGGGGGGYSRGGGGYGGGGGGYGGGGGYGGGRDRGYGGGGGGYG----GRRDGGGGGSEGGWRS

A0A6J1G631 glycine-rich RNA-binding protein 1-like2.2e-5386.71Show/hide
Query:  MASSSVEYRCFVGGLAWATDNQALETAFSGFGEIVEAKVVNDRETGRSRGFGFVTFVDEEAMKTAIESMNGQNLDGRSITVNEAQQRGGGG-----YRGG
        MASSSVEYRCFVGGLAWATDN ALE AFS FGEIVEAK+VNDRETGRSRGFGFVTFVDEEAM++AIE+MNGQNLDGRSITVNEAQQRGGGG      RGG
Subjt:  MASSSVEYRCFVGGLAWATDNQALETAFSGFGEIVEAKVVNDRETGRSRGFGFVTFVDEEAMKTAIESMNGQNLDGRSITVNEAQQRGGGG-----YRGG

Query:  GGGGGYGGRREGGGGGGYSRGGGGYGGGGGGYGGGGGYGGGRDRGYGGGGGGYGGRRD---GGGGGSEGGWRS
        GGGGGYGGRRE GGGGGY+RGGGGYGGGGGGY GGGGYGGGRDRGYGGGGGG GGR     GGGGGSEGGWR+
Subjt:  GGGGGYGGRREGGGGGGYSRGGGGYGGGGGGYGGGGGYGGGRDRGYGGGGGGYGGRRD---GGGGGSEGGWRS

A0A6J1L3C8 glycine-rich RNA-binding, abscisic acid-inducible protein-like isoform X26.3e-4883.33Show/hide
Query:  MASSSVEYRCFVGGLAWATDNQALETAFSGFGEIVEAKVVNDRETGRSRGFGFVTFVDEEAMKTAIESMNGQNLDGRSITVNEAQQRGGGGYRGGGGGGG
        MASSSVEYRCFVGGLAWATDN ALE AFS FGEIVEAK+VNDRETGRSRGFGFVTFVDEEAM++AIE+MNGQNLDGRSITVNEAQQRGG    GGGGGGG
Subjt:  MASSSVEYRCFVGGLAWATDNQALETAFSGFGEIVEAKVVNDRETGRSRGFGFVTFVDEEAMKTAIESMNGQNLDGRSITVNEAQQRGGGGYRGGGGGGG

Query:  YGGRREGGGGGGYSRGGGGYGGGGGGYGGGGGYGGGRDRGYGGGGGGYGGRRD---GGGGGSEGGWRS
        Y     GGGG     GGGGYGGGGGGYGGGGGYGGGRDRGYGGGGGG GGR     GGGGGSEGGWR+
Subjt:  YGGRREGGGGGGYSRGGGGYGGGGGGYGGGGGYGGGRDRGYGGGGGGYGGRRD---GGGGGSEGGWRS

A0A6J1L652 glycine-rich RNA-binding protein 1-like isoform X13.7e-5687.36Show/hide
Query:  MASSSVEYRCFVGGLAWATDNQALETAFSGFGEIVEAKVVNDRETGRSRGFGFVTFVDEEAMKTAIESMNGQNLDGRSITVNEAQQRGGGG------YRG
        MASSSVEYRCFVGGLAWATDN ALE AFS FGEIVEAK+VNDRETGRSRGFGFVTFVDEEAM++AIE+MNGQNLDGRSITVNEAQQRGGGG       RG
Subjt:  MASSSVEYRCFVGGLAWATDNQALETAFSGFGEIVEAKVVNDRETGRSRGFGFVTFVDEEAMKTAIESMNGQNLDGRSITVNEAQQRGGGG------YRG

Query:  GGGGGGYGGRREGGGGGGYSRGGGGYGGGGGGYGGGGGYGGGRDRGYGGGGGGYGGRRD---GGGGGSEGGWRS
        GGGGGGYGGRREGGGGGGY+RGGGGYGGGGGGYGGGGGYGGGRDRGYGGGGGG GGR     GGGGGSEGGWR+
Subjt:  GGGGGGYGGRREGGGGGGYSRGGGGYGGGGGGYGGGGGYGGGRDRGYGGGGGGYGGRRD---GGGGGSEGGWRS

SwissProt top hitse value%identityAlignment
P10979 Glycine-rich RNA-binding, abscisic acid-inducible protein2.0e-3566.08Show/hide
Query:  MASSSVEYRCFVGGLAWATDNQALETAFSGFGEIVEAKVVNDRETGRSRGFGFVTFVDEEAMKTAIESMNGQNLDGRSITVNEAQQRGGGGYRGGGGGGG
        MA++ VEYRCFVGGLAWAT N++LE AF+ +GEI+++KV+ DRETGRSRGFGFVTF  E +M  AIE+MNG+ LDGR+ITVN+AQ RG     GGGGGGG
Subjt:  MASSSVEYRCFVGGLAWATDNQALETAFSGFGEIVEAKVVNDRETGRSRGFGFVTFVDEEAMKTAIESMNGQNLDGRSITVNEAQQRGGGGYRGGGGGGG

Query:  YGGRREGGGGGGYSRGGGGYGGG--GGGYGGGGGYGGGRDRGYG--GGGGGYGGRRDGGG---GGSEGGWR
        YGG           RGGGGYGGG   GGYGGGGGYGG R+ G G  GGGGGYGGRR+GGG   GG  GGWR
Subjt:  YGGRREGGGGGGYSRGGGGYGGG--GGGYGGGGGYGGGRDRGYG--GGGGGYGGRRDGGG---GGSEGGWR

P49310 Glycine-rich RNA-binding protein GRP1A9.1e-3673.78Show/hide
Query:  MASSSVEYRCFVGGLAWATDNQALETAFSGFGEIVEAKVVNDRETGRSRGFGFVTFVDEEAMKTAIESMNGQNLDGRSITVNEAQQRGGGGYRGGGGGGG
        MAS  VEYRCFVGGLAWATD++ALETAFS +GE++++K++NDRETGRSRGFGFVTF DE++MK AIE MNGQ+LDGRSITVNEAQ RG GG  GGGG GG
Subjt:  MASSSVEYRCFVGGLAWATDNQALETAFSGFGEIVEAKVVNDRETGRSRGFGFVTFVDEEAMKTAIESMNGQNLDGRSITVNEAQQRGGGGYRGGGGGGG

Query:  YGGRREGGGGGGYSRGGGGYGGGG--GGYGGGGGYGGGRDRGYGGGGGGYGGRRDGGGGGSEGG
         GG R  GGGGGY  GGGGYGGGG  GGY GGG  GG   RG GGGG G GGRRDGG GG  GG
Subjt:  YGGRREGGGGGGYSRGGGGYGGGG--GGYGGGGGYGGGRDRGYGGGGGGYGGRRDGGGGGSEGG

P49311 Glycine-rich RNA-binding protein GRP2A5.9e-3571.51Show/hide
Query:  MASSSVEYRCFVGGLAWATDNQALETAFSGFGEIVEAKVVNDRETGRSRGFGFVTFVDEEAMKTAIESMNGQNLDGRSITVNEAQQRGGGGYRGG-GGGG
        MAS  VEYRCFVGGLAWATD ++LETAFS FGE+V++K++NDRETGRSRGFGFVTF DE++MK AIE MNGQ+LDGRSITVNEAQ RG G   GG GGGG
Subjt:  MASSSVEYRCFVGGLAWATDNQALETAFSGFGEIVEAKVVNDRETGRSRGFGFVTFVDEEAMKTAIESMNGQNLDGRSITVNEAQQRGGGGYRGG-GGGG

Query:  GY-GGRREGGGGGGYSRG---GGGYGGGGGGY----GGGGGYGGGRDRGYGGGGGGYGGRRDGGGGGSEGGW
        GY GG   GGGGGGY  G   GGGY GGGGGY    GGGGGYGGG  R  GG GGG GG   G GGG  GGW
Subjt:  GY-GGRREGGGGGGYSRG---GGGYGGGGGGY----GGGGGYGGGRDRGYGGGGGGYGGRRDGGGGGSEGGW

Q03250 Glycine-rich RNA-binding protein 77.0e-3667.42Show/hide
Query:  MASSSVEYRCFVGGLAWATDNQALETAFSGFGEIVEAKVVNDRETGRSRGFGFVTFVDEEAMKTAIESMNGQNLDGRSITVNEAQQR-----------GG
        MAS  VEYRCFVGGLAWATD++ALETAF+ +G+++++K++NDRETGRSRGFGFVTF DE+AMK AIE MNGQ+LDGRSITVNEAQ R           GG
Subjt:  MASSSVEYRCFVGGLAWATDNQALETAFSGFGEIVEAKVVNDRETGRSRGFGFVTFVDEEAMKTAIESMNGQNLDGRSITVNEAQQR-----------GG

Query:  GGYRGGGGGGGYGGRREGGGGGGYSRGGGGYGGGGGGY----GGGGGYGGGRDRGYGGGGGGYGGRRDGGGGGSEGGW
        GGYR GGGGG  GG    GGGGG   GGGGY GGGGGY    GGGG YGGGR  G GG GGG GG   G GGG  GGW
Subjt:  GGYRGGGGGGGYGGRREGGGGGGYSRGGGGYGGGGGGY----GGGGGYGGGRDRGYGGGGGGYGGRRDGGGGGSEGGW

Q43472 Glycine-rich RNA-binding protein blt8015.9e-3567.07Show/hide
Query:  SSVEYRCFVGGLAWATDNQALETAFSGFGEIVEAKVVNDRETGRSRGFGFVTFVDEEAMKTAIESMNGQNLDGRSITVNEAQQR---GGGGYRGGGGGGG
        + VEYRCFVGGL WATD+Q+L+ AFS +G+++++K++ DRETGRSRGFGFVTF  +EAM+ AIE+MNGQ+LDGR+ITVNEAQ R   GGGG+  GGGGGG
Subjt:  SSVEYRCFVGGLAWATDNQALETAFSGFGEIVEAKVVNDRETGRSRGFGFVTFVDEEAMKTAIESMNGQNLDGRSITVNEAQQR---GGGGYRGGGGGGG

Query:  YGGRREGGGGGGYSRGGGGYGGGGGGYGGGGGYGGGRDRGYGGGGGGYGGRRDGGGGGSEGGWR
        YGG+R  GGGGGY  GGGGYGGG  G GGG G   G   GYGGGGGGYGG R G GGG+   WR
Subjt:  YGGRREGGGGGGYSRGGGGYGGGGGGYGGGGGYGGGRDRGYGGGGGGYGGRRDGGGGGSEGGWR

Arabidopsis top hitse value%identityAlignment
AT2G21660.1 cold, circadian rhythm, and rna binding 25.0e-3767.42Show/hide
Query:  MASSSVEYRCFVGGLAWATDNQALETAFSGFGEIVEAKVVNDRETGRSRGFGFVTFVDEEAMKTAIESMNGQNLDGRSITVNEAQQR-----------GG
        MAS  VEYRCFVGGLAWATD++ALETAF+ +G+++++K++NDRETGRSRGFGFVTF DE+AMK AIE MNGQ+LDGRSITVNEAQ R           GG
Subjt:  MASSSVEYRCFVGGLAWATDNQALETAFSGFGEIVEAKVVNDRETGRSRGFGFVTFVDEEAMKTAIESMNGQNLDGRSITVNEAQQR-----------GG

Query:  GGYRGGGGGGGYGGRREGGGGGGYSRGGGGYGGGGGGY----GGGGGYGGGRDRGYGGGGGGYGGRRDGGGGGSEGGW
        GGYR GGGGG  GG    GGGGG   GGGGY GGGGGY    GGGG YGGGR  G GG GGG GG   G GGG  GGW
Subjt:  GGYRGGGGGGGYGGRREGGGGGGYSRGGGGYGGGGGGY----GGGGGYGGGRDRGYGGGGGGYGGRRDGGGGGSEGGW

AT2G21660.2 cold, circadian rhythm, and rna binding 21.7e-3773.33Show/hide
Query:  MASSSVEYRCFVGGLAWATDNQALETAFSGFGEIVEAKVVNDRETGRSRGFGFVTFVDEEAMKTAIESMNGQNLDGRSITVNEAQQR---GGGGYRGGGG
        MAS  VEYRCFVGGLAWATD++ALETAF+ +G+++++K++NDRETGRSRGFGFVTF DE+AMK AIE MNGQ+LDGRSITVNEAQ R   GGGG+RGGG 
Subjt:  MASSSVEYRCFVGGLAWATDNQALETAFSGFGEIVEAKVVNDRETGRSRGFGFVTFVDEEAMKTAIESMNGQNLDGRSITVNEAQQR---GGGGYRGGGG

Query:  GGGYGGRREGGGGGGYSRGGGGY---GGGGGGYGGGGGYGGGRDRGYGGG-GGGYGGRRDGGGGG
         GG GGRRE  GGGGYS GGGGY   GGGGG YGGG   GGG   GYGGG GGGYGG   GGGGG
Subjt:  GGGYGGRREGGGGGGYSRGGGGY---GGGGGGYGGGGGYGGGRDRGYGGG-GGGYGGRRDGGGGG

AT4G39260.1 cold, circadian rhythm, and RNA binding 15.3e-3165.29Show/hide
Query:  SSVEYRCFVGGLAWATDNQALETAFSGFGEIVEAKVVNDRETGRSRGFGFVTFVDEEAMKTAIESMNGQNLDGRSITVNEAQQRGGGGYRGGGGGGGYGG
        S VEYRCFVGGLAWAT+++ L+  FS FG+++++K++NDRE+GRSRGFGFVTF DE+AM+ AIE MNG+ LDGR ITVNEAQ RG GG  GGGG GG GG
Subjt:  SSVEYRCFVGGLAWATDNQALETAFSGFGEIVEAKVVNDRETGRSRGFGFVTFVDEEAMKTAIESMNGQNLDGRSITVNEAQQRGGGGYRGGGGGGGYGG

Query:  RREGGGGGGYSRGGGG--YGGGGGGY----GGGGGYGGGRDRGYGGG----GGGYGGRRDGGGGGSEGGW
            GGGGGYS GGGG   GGGGGGY    GG G  GGG  RGYGGG    GGGYGG   G  GG  GGW
Subjt:  RREGGGGGGYSRGGGG--YGGGGGGY----GGGGGYGGGRDRGYGGG----GGGYGGRRDGGGGGSEGGW

AT4G39260.2 cold, circadian rhythm, and RNA binding 15.3e-3167.42Show/hide
Query:  SSVEYRCFVGGLAWATDNQALETAFSGFGEIVEAKVVNDRETGRSRGFGFVTFVDEEAMKTAIESMNGQNLDGRSITVNEAQQRGGGGYRGGGGGGGYGG
        S VEYRCFVGGLAWAT+++ L+  FS FG+++++K++NDRE+GRSRGFGFVTF DE+AM+ AIE MNG+ LDGR ITVNEAQ RG GG  GGGG GG GG
Subjt:  SSVEYRCFVGGLAWATDNQALETAFSGFGEIVEAKVVNDRETGRSRGFGFVTFVDEEAMKTAIESMNGQNLDGRSITVNEAQQRGGGGYRGGGGGGGYGG

Query:  RREGGGGGGYSRGGGGYGGGGGGYGGGGGYGG
            GGGGGYS      GGGGGGY GGGG GG
Subjt:  RREGGGGGGYSRGGGGYGGGGGGYGGGGGYGG

AT5G61030.1 glycine-rich RNA-binding protein 31.4e-1854.39Show/hide
Query:  RCFVGGLAWATDNQALETAFSGFGEIVEAKVVNDRETGRSRGFGFVTFVDEEAMKTAIESMNGQNLDGRSITVNEAQQR------GGGGYRGGGGGGGYG
        + F+GG+A++ D  +L  AF+ +GE+V+ +V+ DRETGRSRGFGFVTF   EA  +AI++++G++L GR + VN A  R      GGGGY  GGGGGGYG
Subjt:  RCFVGGLAWATDNQALETAFSGFGEIVEAKVVNDRETGRSRGFGFVTFVDEEAMKTAIESMNGQNLDGRSITVNEAQQR------GGGGYRGGGGGGGYG

Query:  GRREGGGGGGYSRGGGGYGGGGGGYGG--GGGYGGGRDRGYGG-GGGGYGGRRDGGGG-----GSEGGWRS
        G    GGG G   G GGYGGG GGYGG  GGGYGG    GYGG G GGYGG   G GG     GS GG+ S
Subjt:  GRREGGGGGGYSRGGGGYGGGGGGYGG--GGGYGGGRDRGYGG-GGGGYGGRRDGGGG-----GSEGGWRS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCTCGTCTGTTGAGTACCGTTGCTTCGTCGGTGGCCTCGCCTGGGCCACTGATAATCAAGCCCTAGAGACTGCGTTCTCTGGCTTTGGCGAGATCGTTGAGGC
GAAGGTTGTTAACGATCGTGAAACCGGAAGATCCAGGGGATTTGGATTCGTGACGTTTGTTGATGAGGAGGCGATGAAAACTGCGATTGAATCGATGAATGGACAGAATC
TTGATGGCCGGAGTATCACCGTCAACGAGGCTCAGCAAAGAGGCGGTGGAGGTTACCGCGGTGGTGGAGGCGGCGGAGGATATGGCGGTCGTCGTGAAGGCGGCGGAGGT
GGTGGATACAGCCGTGGTGGCGGTGGTTATGGAGGAGGTGGAGGTGGATATGGAGGAGGAGGTGGTTACGGTGGTGGACGTGACCGTGGATATGGTGGTGGTGGTGGAGG
ATATGGCGGACGCCGTGATGGTGGCGGCGGTGGATCTGAAGGAGGCTGGAGAAGTTAG
mRNA sequenceShow/hide mRNA sequence
GTTCCACCTACAGCGCCTTCTAGGTTAACCCTGATTTGGAAATAAACCGCACCGGTTCAGTTGCGAGAGAACCCTAAAACTAACCCTAGTTACATACTAACCCTATAAAA
ACCAGTCGCTCGGTTCGTCTCCATTCACTGTGCGTTTCTTCAGTTGCTGCTCTTCTTTCTTTCTGTTTTGAAACCCTTTCTAGGGTTAGGGTTAGGGTTTTCTCGAGATT
CCTTCCATGGCTTCCTCGTCTGTTGAGTACCGTTGCTTCGTCGGTGGCCTCGCCTGGGCCACTGATAATCAAGCCCTAGAGACTGCGTTCTCTGGCTTTGGCGAGATCGT
TGAGGCGAAGGTTGTTAACGATCGTGAAACCGGAAGATCCAGGGGATTTGGATTCGTGACGTTTGTTGATGAGGAGGCGATGAAAACTGCGATTGAATCGATGAATGGAC
AGAATCTTGATGGCCGGAGTATCACCGTCAACGAGGCTCAGCAAAGAGGCGGTGGAGGTTACCGCGGTGGTGGAGGCGGCGGAGGATATGGCGGTCGTCGTGAAGGCGGC
GGAGGTGGTGGATACAGCCGTGGTGGCGGTGGTTATGGAGGAGGTGGAGGTGGATATGGAGGAGGAGGTGGTTACGGTGGTGGACGTGACCGTGGATATGGTGGTGGTGG
TGGAGGATATGGCGGACGCCGTGATGGTGGCGGCGGTGGATCTGAAGGAGGCTGGAGAAGTTAGAGACGGTGGCCCTTTCAATTTGGAATTATTAGTGTGATAAAATAAC
AAAAATCTATGATGAATCTAGCTTGTTCTTAATTTCGTTTTAAGCTGCTTTGATCTGTTACATTTGGGTTTTCTGTTTTTTGATCGATGGGTTTCTTGTTCTATCTTCAC
ATCTGAGTACAGCTTTTTTGATCTCTCCCCTGTTCATCTCTCCATTATTGTTCAATTAATCTGCCATTTAATTTTTTTTTACCTTTTACAAAAATATCTTAGAGGGCCCA
AGATATTTTATCGGCAAAAATCGTCAGATGTTTTTCAATGATGTGGGTTTTTTTTTATCGGGCTGCGTAACTGACAAGCAGTCGTGTATATTAATAATTGGAATATTCAA
AGTTTGTGTAATTGTTGTATTTTTGTCGTTTTGTTGGATTGGAATATTTTTTGGGCCTGGGCTTTTGAACTTCTCTTACATGGGCCTGTCGTTCTTGGCCCGAGGTGGCG
TCTCTTGAAATATTAAGTTTTTGGCGAGTAAAAAATTCAGTGTTTTTGTAAAAAACTTTCAGTAGTTGTCTAAATTTTTATTTAATTGTTTCTGCATATGATTTAATTCT
GTGGCTATTGAAAAATGTGGGGCATTTTTTTTATTAAGACAACAAATATATATATATATATAAGCTTAGTTTATTACGACTAAGATGGTGTGATTTAACAGATTTGCACG
GTTTGGG
Protein sequenceShow/hide protein sequence
MASSSVEYRCFVGGLAWATDNQALETAFSGFGEIVEAKVVNDRETGRSRGFGFVTFVDEEAMKTAIESMNGQNLDGRSITVNEAQQRGGGGYRGGGGGGGYGGRREGGGG
GGYSRGGGGYGGGGGGYGGGGGYGGGRDRGYGGGGGGYGGRRDGGGGGSEGGWRS