; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0012040 (gene) of Chayote v1 genome

Gene IDSed0012040
OrganismSechium edule (Chayote v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationLG13:738559..742008
RNA-Seq ExpressionSed0012040
SyntenySed0012040
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily
IPR044646 - Pentatricopeptide repeat-containing protein EMB1417-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013270.1 Pentatricopeptide repeat-containing protein [Cucurbita argyrosperma subsp. argyrosperma]4.0e-14483.58Show/hide
Query:  MAQSVAPASVTSLSSSSAFNRTLTLICSFPAISKRIESVQFSWSSSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSF
        MA S+ PA   SLSS+ A NR  TLI SFP ISK IESV+FS  +SSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSF
Subjt:  MAQSVAPASVTSLSSSSAFNRTLTLICSFPAISKRIESVQFSWSSSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSF

Query:  IAWELEFPLIIVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISIYYDRSMHDKLF
        IAWELEFPLI VKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQ+LESMPRIFFHKMIS+YY+R MHDKLF
Subjt:  IAWELEFPLIIVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISIYYDRSMHDKLF

Query:  EIFADMEELGVQPNMAIVTMVGNVFQELGMLDKHEKLKKKYPPPKWEYRYIKGKRVRIRAKYPHENSNFNYGSSELDKTEQSATEP-LEEAEITYEDLSS
        EIFADMEELGVQP+MAIVTM+GNVFQ+LGMLDK+EKLKKKYPPPKWEYRYI+GKRV+IRAK  HEN + N GS ELDK E S+TE  LEE +IT +D S 
Subjt:  EIFADMEELGVQPNMAIVTMVGNVFQELGMLDKHEKLKKKYPPPKWEYRYIKGKRVRIRAKYPHENSNFNYGSSELDKTEQSATEP-LEEAEITYEDLSS

Query:  QDEEMSEDSDEILEDES-MLKESSFEHDFMGVGQL
        +D+EMSED  E LEDES MLKES+FEHDFMG GQL
Subjt:  QDEEMSEDSDEILEDES-MLKESSFEHDFMGVGQL

XP_022140817.1 pentatricopeptide repeat-containing protein At4g21190 [Momordica charantia]1.2e-14383.54Show/hide
Query:  SLSSSSAFNRTLTLICSFPAISKRIESVQFSWSSSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLII
        SLSSSSA NR  TLI SFP ISKRIESV+FSWS+SS+VVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLI 
Subjt:  SLSSSSAFNRTLTLICSFPAISKRIESVQFSWSSSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLII

Query:  VKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISIYYDRSMHDKLFEIFADMEELGV
        VKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQYLESMPR+FFHKMIS+YYD+ MHDKLFE+FADMEELGV
Subjt:  VKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISIYYDRSMHDKLFEIFADMEELGV

Query:  QPNMAIVTMVGNVFQELGMLDKHEKLKKKYPPPKWEYRYIKGKRVRIRAKYPHENSNFNYGSSELDKTEQSATEPLEEAEITYEDLSSQDEEMSEDSDEI
        QPN  IVTM+GNVFQELGM DK+EKLKKKYPP KWEYRY+KGKRVRIRAKY +E  N N GSSELD+ + S+ + LEEAE   +D S +DEEM ED DEI
Subjt:  QPNMAIVTMVGNVFQELGMLDKHEKLKKKYPPPKWEYRYIKGKRVRIRAKYPHENSNFNYGSSELDKTEQSATEPLEEAEITYEDLSSQDEEMSEDSDEI

Query:  LEDESMLKESSFEHDFMGVGQL
        LEDES L+   FE++FMG G+L
Subjt:  LEDESMLKESSFEHDFMGVGQL

XP_022945794.1 pentatricopeptide repeat-containing protein At4g21190 [Cucurbita moschata]6.7e-14483.58Show/hide
Query:  MAQSVAPASVTSLSSSSAFNRTLTLICSFPAISKRIESVQFSWSSSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSF
        MA S+ PA   SLSS+ A NR  TLI SFP ISK IESV+FS  +SSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSF
Subjt:  MAQSVAPASVTSLSSSSAFNRTLTLICSFPAISKRIESVQFSWSSSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSF

Query:  IAWELEFPLIIVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISIYYDRSMHDKLF
        IAWELEFPLI VKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALA DGRLDEAEELWNKLFSQ+LESMPRIFFHKMIS+YY+R MHDKLF
Subjt:  IAWELEFPLIIVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISIYYDRSMHDKLF

Query:  EIFADMEELGVQPNMAIVTMVGNVFQELGMLDKHEKLKKKYPPPKWEYRYIKGKRVRIRAKYPHENSNFNYGSSELDKTEQSATEP-LEEAEITYEDLSS
        EIFADMEELGVQP+MAIVT +GNVFQ+LGMLDK+EKLKKKYPPPKWEYRYI+GKRV+IRAK  HEN + N GS ELDK E S+TE  LEE EIT +D S 
Subjt:  EIFADMEELGVQPNMAIVTMVGNVFQELGMLDKHEKLKKKYPPPKWEYRYIKGKRVRIRAKYPHENSNFNYGSSELDKTEQSATEP-LEEAEITYEDLSS

Query:  QDEEMSEDSDEILEDES-MLKESSFEHDFMGVGQL
        +D+EMSED DE LEDES MLKES+FEHDFMG GQL
Subjt:  QDEEMSEDSDEILEDES-MLKESSFEHDFMGVGQL

XP_023541679.1 pentatricopeptide repeat-containing protein At4g21190 [Cucurbita pepo subsp. pepo]1.2e-14383.38Show/hide
Query:  MAQSVAPASVTSLSSSSAFNRTLTLICSFPAISKRIESVQFSW--SSSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALD
        MA S+ PA   SLSS+ A NR  TLI SFP ISK IESV+FS   S+SSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALD
Subjt:  MAQSVAPASVTSLSSSSAFNRTLTLICSFPAISKRIESVQFSW--SSSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALD

Query:  SFIAWELEFPLIIVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISIYYDRSMHDK
        SFIAWELEFPLI VKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQ+LESMPRIFFHKMIS+YY+R MHDK
Subjt:  SFIAWELEFPLIIVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISIYYDRSMHDK

Query:  LFEIFADMEELGVQPNMAIVTMVGNVFQELGMLDKHEKLKKKYPPPKWEYRYIKGKRVRIRAKYPHENSNFNYGSSELDKTEQSATEP-LEEAEITYEDL
        LFEIFADMEELGVQP+MAIVTM+GNVFQ+LGMLDK+EKLKKKYPPPKWEYRYI+GKRV+IRAK  HEN + N GS + DK E S+TE  LEE EIT +D 
Subjt:  LFEIFADMEELGVQPNMAIVTMVGNVFQELGMLDKHEKLKKKYPPPKWEYRYIKGKRVRIRAKYPHENSNFNYGSSELDKTEQSATEP-LEEAEITYEDL

Query:  SSQDEEMSEDSDEILEDESM-LKESSFEHDFMGVGQL
        S +D+EMSED DE LEDESM LKES+FEHDFMG GQL
Subjt:  SSQDEEMSEDSDEILEDESM-LKESSFEHDFMGVGQL

XP_038888232.1 pentatricopeptide repeat-containing protein At4g21190 isoform X1 [Benincasa hispida]1.5e-14382.63Show/hide
Query:  MAQSVAPASVTSLSSSSAFNRTLTLICSFPAISKRIESVQFSWSSSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSF
        MA S+A A   SLSSSSA  R LTLI SFP ISKRIESV FSW +SSSVVCAAKGPRPRYPRVWKT+KRIGT+SKAAKLVDCVKGLSNVKEEVYGALDSF
Subjt:  MAQSVAPASVTSLSSSSAFNRTLTLICSFPAISKRIESVQFSWSSSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSF

Query:  IAWELEFPLIIVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISIYYDRSMHDKLF
        IAWELEFPLI VKKAL+TLE QREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQ+LESMPRIFFHKMIS+YYDR+MHDKLF
Subjt:  IAWELEFPLIIVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISIYYDRSMHDKLF

Query:  EIFADMEELGVQPNMAIVTMVGNVFQELGMLDKHEKLKKKYPPPKWEYRYIKGKRVRIRAKYPHENSNFNYGSSELDKTEQSATEPLEEAEITYEDLSSQ
        E+FADMEELGVQPNM IVTMVGNVF ELGMLDK+EKL KKYPPPKWEYRYIKGKRVRIR+KY +EN N N   S+ DK E S+T+ LEEAEIT ED + +
Subjt:  EIFADMEELGVQPNMAIVTMVGNVFQELGMLDKHEKLKKKYPPPKWEYRYIKGKRVRIRAKYPHENSNFNYGSSELDKTEQSATEPLEEAEITYEDLSSQ

Query:  DE-EMSEDSDEILEDESMLKESSFEHDFMGVGQL
        D+ EMSED +EI +DE M KE +FEHDFMG GQL
Subjt:  DE-EMSEDSDEILEDESMLKESSFEHDFMGVGQL

TrEMBL top hitse value%identityAlignment
A0A5A7SS06 Pentatricopeptide repeat-containing protein6.8e-14282.66Show/hide
Query:  SLSSSSAFNRTLTLICSFPAISKRIESVQFSWSSSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLII
        +L+S SA  R LTL+ +FP  SKRIESV FSW  SSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLI 
Subjt:  SLSSSSAFNRTLTLICSFPAISKRIESVQFSWSSSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLII

Query:  VKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISIYYDRSMHDKLFEIFADMEELGV
        VKKALKTLE QREWKRIIQLTKWMLSKGQGRTMGSYFTLLNAL EDGRLDEAEELWNKLFSQYLESMPRIFFHKMIS+YYDR+MHDKLFE+FADMEELGV
Subjt:  VKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISIYYDRSMHDKLFEIFADMEELGV

Query:  QPNMAIVTMVGNVFQELGMLDKHEKLKKKYPPPKWEYRYIKGKRVRIRAKYPHENSNFNYGSSELDKTEQSATEPLEEAEITYEDLS-SQDEEMSEDSDE
        QPNMAIVT VGN+FQELGMLDK+EKL KKYPPPKWEYRYIKGKRV+IR KY  EN N   G SE +K E S+T  L+EAEIT ED S   DEE+ +D DE
Subjt:  QPNMAIVTMVGNVFQELGMLDKHEKLKKKYPPPKWEYRYIKGKRVRIRAKYPHENSNFNYGSSELDKTEQSATEPLEEAEITYEDLS-SQDEEMSEDSDE

Query:  ILEDESMLKESSFEHDFMGVGQL
        ILEDE M  +S+FEHDFMG+GQL
Subjt:  ILEDESMLKESSFEHDFMGVGQL

A0A5D3DHA7 Pentatricopeptide repeat-containing protein4.0e-14282.66Show/hide
Query:  SLSSSSAFNRTLTLICSFPAISKRIESVQFSWSSSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLII
        +L+S SA  R LTL+ +FP  SKRIESV FSW  SSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLI 
Subjt:  SLSSSSAFNRTLTLICSFPAISKRIESVQFSWSSSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLII

Query:  VKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISIYYDRSMHDKLFEIFADMEELGV
        VKKALKTLE QREWKRIIQLTKWMLSKGQGRTMGSYFTLLNAL EDGRLDEAEELWNKLFSQYLESMPRIFFHKMIS+YYDR+MHDKLFE+FADMEELGV
Subjt:  VKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISIYYDRSMHDKLFEIFADMEELGV

Query:  QPNMAIVTMVGNVFQELGMLDKHEKLKKKYPPPKWEYRYIKGKRVRIRAKYPHENSNFNYGSSELDKTEQSATEPLEEAEITYEDLS-SQDEEMSEDSDE
        QPNMAIVT VGN+FQELGMLDK+EKL KKYPPPKWEYRYIKGKRV+IR KY  EN N   G SE +K E S+T  L+EAEIT ED S   DEE+ +D DE
Subjt:  QPNMAIVTMVGNVFQELGMLDKHEKLKKKYPPPKWEYRYIKGKRVRIRAKYPHENSNFNYGSSELDKTEQSATEPLEEAEITYEDLS-SQDEEMSEDSDE

Query:  ILEDESMLKESSFEHDFMGVGQL
        ILEDE M  +S+FEHDFMG+GQL
Subjt:  ILEDESMLKESSFEHDFMGVGQL

A0A6J1CI57 pentatricopeptide repeat-containing protein At4g211905.6e-14483.54Show/hide
Query:  SLSSSSAFNRTLTLICSFPAISKRIESVQFSWSSSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLII
        SLSSSSA NR  TLI SFP ISKRIESV+FSWS+SS+VVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLI 
Subjt:  SLSSSSAFNRTLTLICSFPAISKRIESVQFSWSSSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLII

Query:  VKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISIYYDRSMHDKLFEIFADMEELGV
        VKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQYLESMPR+FFHKMIS+YYD+ MHDKLFE+FADMEELGV
Subjt:  VKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISIYYDRSMHDKLFEIFADMEELGV

Query:  QPNMAIVTMVGNVFQELGMLDKHEKLKKKYPPPKWEYRYIKGKRVRIRAKYPHENSNFNYGSSELDKTEQSATEPLEEAEITYEDLSSQDEEMSEDSDEI
        QPN  IVTM+GNVFQELGM DK+EKLKKKYPP KWEYRY+KGKRVRIRAKY +E  N N GSSELD+ + S+ + LEEAE   +D S +DEEM ED DEI
Subjt:  QPNMAIVTMVGNVFQELGMLDKHEKLKKKYPPPKWEYRYIKGKRVRIRAKYPHENSNFNYGSSELDKTEQSATEPLEEAEITYEDLSSQDEEMSEDSDEI

Query:  LEDESMLKESSFEHDFMGVGQL
        LEDES L+   FE++FMG G+L
Subjt:  LEDESMLKESSFEHDFMGVGQL

A0A6J1G1Y3 pentatricopeptide repeat-containing protein At4g211903.3e-14483.58Show/hide
Query:  MAQSVAPASVTSLSSSSAFNRTLTLICSFPAISKRIESVQFSWSSSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSF
        MA S+ PA   SLSS+ A NR  TLI SFP ISK IESV+FS  +SSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSF
Subjt:  MAQSVAPASVTSLSSSSAFNRTLTLICSFPAISKRIESVQFSWSSSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSF

Query:  IAWELEFPLIIVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISIYYDRSMHDKLF
        IAWELEFPLI VKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALA DGRLDEAEELWNKLFSQ+LESMPRIFFHKMIS+YY+R MHDKLF
Subjt:  IAWELEFPLIIVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISIYYDRSMHDKLF

Query:  EIFADMEELGVQPNMAIVTMVGNVFQELGMLDKHEKLKKKYPPPKWEYRYIKGKRVRIRAKYPHENSNFNYGSSELDKTEQSATEP-LEEAEITYEDLSS
        EIFADMEELGVQP+MAIVT +GNVFQ+LGMLDK+EKLKKKYPPPKWEYRYI+GKRV+IRAK  HEN + N GS ELDK E S+TE  LEE EIT +D S 
Subjt:  EIFADMEELGVQPNMAIVTMVGNVFQELGMLDKHEKLKKKYPPPKWEYRYIKGKRVRIRAKYPHENSNFNYGSSELDKTEQSATEP-LEEAEITYEDLSS

Query:  QDEEMSEDSDEILEDES-MLKESSFEHDFMGVGQL
        +D+EMSED DE LEDES MLKES+FEHDFMG GQL
Subjt:  QDEEMSEDSDEILEDES-MLKESSFEHDFMGVGQL

A0A6J1HWS4 pentatricopeptide repeat-containing protein At4g211901.6e-14383.38Show/hide
Query:  MAQSVAPASVTSLSSSSAFNRTLTLICSFPAISKRIESVQFSW--SSSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALD
        MA S+ PA   SLSS+ A NR  TLI SFP ISK IESV+FS   S+ SSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALD
Subjt:  MAQSVAPASVTSLSSSSAFNRTLTLICSFPAISKRIESVQFSW--SSSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALD

Query:  SFIAWELEFPLIIVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISIYYDRSMHDK
        SFIAWELEFPLI VKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQ+LESMPRIFFHKMIS+YY+R MHDK
Subjt:  SFIAWELEFPLIIVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISIYYDRSMHDK

Query:  LFEIFADMEELGVQPNMAIVTMVGNVFQELGMLDKHEKLKKKYPPPKWEYRYIKGKRVRIRAKYPHENSNFNYGSSELDKTEQSATEP-LEEAEITYEDL
        LFEIFADMEELGVQP+MAIVTM+G+VFQ+LGMLDK EKLKKKYPPPKWEYRYI+GKRV+IRAK  HEN + N GS ELDK EQS+TE  LEE E T +D 
Subjt:  LFEIFADMEELGVQPNMAIVTMVGNVFQELGMLDKHEKLKKKYPPPKWEYRYIKGKRVRIRAKYPHENSNFNYGSSELDKTEQSATEP-LEEAEITYEDL

Query:  SSQDEEMSEDSDEILEDESM-LKESSFEHDFMGVGQL
        S +D+EMSED DE+LEDESM LKES+FEHDFMG GQL
Subjt:  SSQDEEMSEDSDEILEDESM-LKESSFEHDFMGVGQL

SwissProt top hitse value%identityAlignment
Q2V3H0 Pentatricopeptide repeat-containing protein At4g18975, chloroplastic1.6e-4243.63Show/hide
Query:  VWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLIIVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDE
        +WK     G+  KA  LV  + GL N KE VYGAL+ ++AWE+EFP+I   KAL+ L  + +W R+IQL KWMLSKGQG TMG+Y  LL A   D R DE
Subjt:  VWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLIIVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDE

Query:  AEELWNKLFSQYLESMPRIFFHKMISIYYDRSMHDKLFEIFADMEELGVQPNMAIVTMVGNVFQELGMLDKHEKLKKKYPPPKWEYRYIKGKRVRIRAKY
        AE LWN +   +  S+PR  F +MI++Y    +HDK+ E+FADMEEL V P+      V   F+EL   +  + + ++Y   +++Y Y  G+RVR++  +
Subjt:  AEELWNKLFSQYLESMPRIFFHKMISIYYDRSMHDKLFEIFADMEELGVQPNMAIVTMVGNVFQELGMLDKHEKLKKKYPPPKWEYRYIKGKRVRIRAKY

Query:  PHEN
          ++
Subjt:  PHEN

Q8LG95 Pentatricopeptide repeat-containing protein At4g211902.0e-9868.8Show/hide
Query:  FSWSSSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLIIVKKALKTLEIQREWKRIIQLTKWMLSKGQ
        F+   ++ VVCAA+GPRPR PRVWKTRKRIGTISKAAK++ C+KGLSNVKEEVYGALDSFIAWELEFPL+IVKKAL  LE ++EWK+IIQ+TKWMLSKGQ
Subjt:  FSWSSSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLIIVKKALKTLEIQREWKRIIQLTKWMLSKGQ

Query:  GRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISIYYDRSMHDKLFEIFADMEELGVQPNMAIVTMVGNVFQELGMLDKHEKLKKK
        GRTMG+YF+LLNALAED RLDEAEELWNKLF ++LE  PR FF+KMISIYY R MH KLFE+FADMEELGV+PN+AIV+MVG VF +L M DK+EKL KK
Subjt:  GRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISIYYDRSMHDKLFEIFADMEELGVQPNMAIVTMVGNVFQELGMLDKHEKLKKK

Query:  YPPPKWEYRYIKGKRVRIRAKYPHENSNFNYGSSELDKTEQSATEPLEEAEITYEDLSSQDEEMSE
        YPPP+WE+RYIKG+RV+++AK  +E S    G   L   E      +E  E   EDLS ++E+  E
Subjt:  YPPPKWEYRYIKGKRVRIRAKYPHENSNFNYGSSELDKTEQSATEPLEEAEITYEDLSSQDEEMSE

Arabidopsis top hitse value%identityAlignment
AT4G18975.1 Pentatricopeptide repeat (PPR) superfamily protein1.1e-4343.63Show/hide
Query:  VWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLIIVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDE
        +WK     G+  KA  LV  + GL N KE VYGAL+ ++AWE+EFP+I   KAL+ L  + +W R+IQL KWMLSKGQG TMG+Y  LL A   D R DE
Subjt:  VWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLIIVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDE

Query:  AEELWNKLFSQYLESMPRIFFHKMISIYYDRSMHDKLFEIFADMEELGVQPNMAIVTMVGNVFQELGMLDKHEKLKKKYPPPKWEYRYIKGKRVRIRAKY
        AE LWN +   +  S+PR  F +MI++Y    +HDK+ E+FADMEEL V P+      V   F+EL   +  + + ++Y   +++Y Y  G+RVR++  +
Subjt:  AEELWNKLFSQYLESMPRIFFHKMISIYYDRSMHDKLFEIFADMEELGVQPNMAIVTMVGNVFQELGMLDKHEKLKKKYPPPKWEYRYIKGKRVRIRAKY

Query:  PHEN
          ++
Subjt:  PHEN

AT4G18975.2 Pentatricopeptide repeat (PPR) superfamily protein1.1e-4343.63Show/hide
Query:  VWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLIIVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDE
        +WK     G+  KA  LV  + GL N KE VYGAL+ ++AWE+EFP+I   KAL+ L  + +W R+IQL KWMLSKGQG TMG+Y  LL A   D R DE
Subjt:  VWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLIIVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDE

Query:  AEELWNKLFSQYLESMPRIFFHKMISIYYDRSMHDKLFEIFADMEELGVQPNMAIVTMVGNVFQELGMLDKHEKLKKKYPPPKWEYRYIKGKRVRIRAKY
        AE LWN +   +  S+PR  F +MI++Y    +HDK+ E+FADMEEL V P+      V   F+EL   +  + + ++Y   +++Y Y  G+RVR++  +
Subjt:  AEELWNKLFSQYLESMPRIFFHKMISIYYDRSMHDKLFEIFADMEELGVQPNMAIVTMVGNVFQELGMLDKHEKLKKKYPPPKWEYRYIKGKRVRIRAKY

Query:  PHEN
          ++
Subjt:  PHEN

AT4G18975.3 Pentatricopeptide repeat (PPR) superfamily protein1.1e-4343.63Show/hide
Query:  VWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLIIVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDE
        +WK     G+  KA  LV  + GL N KE VYGAL+ ++AWE+EFP+I   KAL+ L  + +W R+IQL KWMLSKGQG TMG+Y  LL A   D R DE
Subjt:  VWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLIIVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDE

Query:  AEELWNKLFSQYLESMPRIFFHKMISIYYDRSMHDKLFEIFADMEELGVQPNMAIVTMVGNVFQELGMLDKHEKLKKKYPPPKWEYRYIKGKRVRIRAKY
        AE LWN +   +  S+PR  F +MI++Y    +HDK+ E+FADMEEL V P+      V   F+EL   +  + + ++Y   +++Y Y  G+RVR++  +
Subjt:  AEELWNKLFSQYLESMPRIFFHKMISIYYDRSMHDKLFEIFADMEELGVQPNMAIVTMVGNVFQELGMLDKHEKLKKKYPPPKWEYRYIKGKRVRIRAKY

Query:  PHEN
          ++
Subjt:  PHEN

AT4G18975.4 Pentatricopeptide repeat (PPR) superfamily protein1.1e-4343.63Show/hide
Query:  VWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLIIVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDE
        +WK     G+  KA  LV  + GL N KE VYGAL+ ++AWE+EFP+I   KAL+ L  + +W R+IQL KWMLSKGQG TMG+Y  LL A   D R DE
Subjt:  VWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLIIVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDE

Query:  AEELWNKLFSQYLESMPRIFFHKMISIYYDRSMHDKLFEIFADMEELGVQPNMAIVTMVGNVFQELGMLDKHEKLKKKYPPPKWEYRYIKGKRVRIRAKY
        AE LWN +   +  S+PR  F +MI++Y    +HDK+ E+FADMEEL V P+      V   F+EL   +  + + ++Y   +++Y Y  G+RVR++  +
Subjt:  AEELWNKLFSQYLESMPRIFFHKMISIYYDRSMHDKLFEIFADMEELGVQPNMAIVTMVGNVFQELGMLDKHEKLKKKYPPPKWEYRYIKGKRVRIRAKY

Query:  PHEN
          ++
Subjt:  PHEN

AT4G21190.1 Pentatricopeptide repeat (PPR) superfamily protein1.4e-9968.8Show/hide
Query:  FSWSSSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLIIVKKALKTLEIQREWKRIIQLTKWMLSKGQ
        F+   ++ VVCAA+GPRPR PRVWKTRKRIGTISKAAK++ C+KGLSNVKEEVYGALDSFIAWELEFPL+IVKKAL  LE ++EWK+IIQ+TKWMLSKGQ
Subjt:  FSWSSSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLIIVKKALKTLEIQREWKRIIQLTKWMLSKGQ

Query:  GRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISIYYDRSMHDKLFEIFADMEELGVQPNMAIVTMVGNVFQELGMLDKHEKLKKK
        GRTMG+YF+LLNALAED RLDEAEELWNKLF ++LE  PR FF+KMISIYY R MH KLFE+FADMEELGV+PN+AIV+MVG VF +L M DK+EKL KK
Subjt:  GRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISIYYDRSMHDKLFEIFADMEELGVQPNMAIVTMVGNVFQELGMLDKHEKLKKK

Query:  YPPPKWEYRYIKGKRVRIRAKYPHENSNFNYGSSELDKTEQSATEPLEEAEITYEDLSSQDEEMSE
        YPPP+WE+RYIKG+RV+++AK  +E S    G   L   E      +E  E   EDLS ++E+  E
Subjt:  YPPPKWEYRYIKGKRVRIRAKYPHENSNFNYGSSELDKTEQSATEPLEEAEITYEDLSSQDEEMSE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCAGTCTGTAGCGCCAGCATCGGTCACAAGCCTCTCATCCTCCTCGGCTTTCAACCGGACGCTTACTTTGATTTGCTCTTTTCCAGCCATATCTAAAAGGATAGA
ATCTGTTCAGTTTTCATGGAGTTCAAGCAGTTCAGTGGTATGCGCTGCAAAAGGTCCACGGCCGAGATATCCTCGGGTCTGGAAAACCAGAAAGAGAATTGGAACCATCT
CCAAGGCAGCAAAGCTTGTTGATTGCGTCAAGGGACTGTCTAACGTCAAAGAGGAAGTCTATGGGGCTCTTGATTCCTTCATTGCATGGGAACTAGAGTTTCCTCTAATT
ATTGTAAAGAAGGCCCTGAAAACCTTAGAGATTCAAAGAGAATGGAAGAGGATAATTCAGTTAACGAAATGGATGTTAAGTAAAGGCCAAGGAAGAACAATGGGAAGCTA
TTTCACGTTATTAAATGCTTTAGCTGAAGATGGAAGACTTGATGAAGCAGAAGAGCTTTGGAACAAATTGTTTTCTCAGTATCTGGAGAGCATGCCTCGCATATTCTTTC
ATAAAATGATATCCATCTACTATGACCGGAGCATGCACGACAAGTTATTTGAGATATTTGCTGATATGGAGGAACTTGGAGTTCAACCAAATATGGCAATTGTCACTATG
GTTGGAAATGTCTTCCAAGAATTGGGTATGTTAGATAAACATGAAAAACTGAAGAAGAAATACCCTCCACCAAAATGGGAGTATCGTTACATCAAAGGAAAGCGCGTAAG
AATACGAGCGAAGTATCCGCACGAAAACAGTAATTTCAACTATGGTTCAAGTGAGCTCGACAAAACGGAGCAGAGTGCAACAGAACCATTGGAGGAAGCTGAAATAACTT
ACGAAGATTTGAGTTCTCAAGATGAAGAAATGAGTGAAGACTCGGATGAAATTTTGGAAGATGAAAGTATGTTGAAGGAATCCAGTTTTGAGCACGATTTCATGGGGGTT
GGGCAGTTGTAA
mRNA sequenceShow/hide mRNA sequence
AAAATATCGAGAAAACAAGGAAAGGGAGAAAAAATGGCGCAGTCTGTAGCGCCAGCATCGGTCACAAGCCTCTCATCCTCCTCGGCTTTCAACCGGACGCTTACTTTGAT
TTGCTCTTTTCCAGCCATATCTAAAAGGATAGAATCTGTTCAGTTTTCATGGAGTTCAAGCAGTTCAGTGGTATGCGCTGCAAAAGGTCCACGGCCGAGATATCCTCGGG
TCTGGAAAACCAGAAAGAGAATTGGAACCATCTCCAAGGCAGCAAAGCTTGTTGATTGCGTCAAGGGACTGTCTAACGTCAAAGAGGAAGTCTATGGGGCTCTTGATTCC
TTCATTGCATGGGAACTAGAGTTTCCTCTAATTATTGTAAAGAAGGCCCTGAAAACCTTAGAGATTCAAAGAGAATGGAAGAGGATAATTCAGTTAACGAAATGGATGTT
AAGTAAAGGCCAAGGAAGAACAATGGGAAGCTATTTCACGTTATTAAATGCTTTAGCTGAAGATGGAAGACTTGATGAAGCAGAAGAGCTTTGGAACAAATTGTTTTCTC
AGTATCTGGAGAGCATGCCTCGCATATTCTTTCATAAAATGATATCCATCTACTATGACCGGAGCATGCACGACAAGTTATTTGAGATATTTGCTGATATGGAGGAACTT
GGAGTTCAACCAAATATGGCAATTGTCACTATGGTTGGAAATGTCTTCCAAGAATTGGGTATGTTAGATAAACATGAAAAACTGAAGAAGAAATACCCTCCACCAAAATG
GGAGTATCGTTACATCAAAGGAAAGCGCGTAAGAATACGAGCGAAGTATCCGCACGAAAACAGTAATTTCAACTATGGTTCAAGTGAGCTCGACAAAACGGAGCAGAGTG
CAACAGAACCATTGGAGGAAGCTGAAATAACTTACGAAGATTTGAGTTCTCAAGATGAAGAAATGAGTGAAGACTCGGATGAAATTTTGGAAGATGAAAGTATGTTGAAG
GAATCCAGTTTTGAGCACGATTTCATGGGGGTTGGGCAGTTGTAAATATACATATTATGTATTTTCCCATTTGAAGTTCCTCAAAAGTCTCTCCTTCAATTTATAGCATT
GTGATCATGGAGTGAATTTTCTTTATTTTCAGCTTTCAATATTACAATATTCGACTGACATATGGCATCACCTTGCTTATGATAACCAGGATGAATGCTGGAGAAGGAGC
AGCTTTTAGTTTAAATTTCCATCCATAAATTTGTGATCTGTACGAAAATAATTTTCTACTAGTTTTCATTCAAATGTTGTAGTCGAGATACCGAGACACATGTAAGCTAG
A
Protein sequenceShow/hide protein sequence
MAQSVAPASVTSLSSSSAFNRTLTLICSFPAISKRIESVQFSWSSSSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLI
IVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQYLESMPRIFFHKMISIYYDRSMHDKLFEIFADMEELGVQPNMAIVTM
VGNVFQELGMLDKHEKLKKKYPPPKWEYRYIKGKRVRIRAKYPHENSNFNYGSSELDKTEQSATEPLEEAEITYEDLSSQDEEMSEDSDEILEDESMLKESSFEHDFMGV
GQL