| GenBank top hits | e value | %identity | Alignment |
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| XP_004140788.1 DNA-directed RNA polymerases II, IV and V subunit 6A [Cucumis sativus] | 3.5e-65 | 91.61 | Show/hide |
Query: MADDDYNDPDMGYEDEPPEPEMEDGAEEELDNNNNDDVPGEAVEDEGKEDAEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIA
MADDDYND DMGYEDEPPEPE+E+GAEEEL+NNNNDD+PGE VE E KED EP+ R RKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIA
Subjt: MADDDYNDPDMGYEDEPPEPEMEDGAEEELDNNNNDDVPGEAVEDEGKEDAEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIA
Query: MKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGA
MKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGA
Subjt: MKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGA
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| XP_008439178.1 PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 6A [Cucumis melo] | 6.0e-65 | 92.31 | Show/hide |
Query: MADDDYNDPDMGYEDEPPEPEMEDGAEEELDNNNNDDVPGEAVEDEGKEDAEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIA
MADDDYND DMGYEDEPPEPE+E+GAEEELDN NNDD+ GE VE E KED EPVER RKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIA
Subjt: MADDDYNDPDMGYEDEPPEPEMEDGAEEELDNNNNDDVPGEAVEDEGKEDAEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIA
Query: MKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGA
MKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGA
Subjt: MKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGA
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| XP_022141284.1 DNA-directed RNA polymerases II, IV and V subunit 6A [Momordica charantia] | 1.9e-66 | 95.1 | Show/hide |
Query: MADDDYNDPDMGYEDEPPEPEMEDGAEEELDNNNNDDVPGEAVEDEGKEDAEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIA
MADDDYND DMGYEDEPPEPEME+GAEEELDNNNNDDV GE VE E KED EPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIA
Subjt: MADDDYNDPDMGYEDEPPEPEMEDGAEEELDNNNNDDVPGEAVEDEGKEDAEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIA
Query: MKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGA
MKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGA
Subjt: MKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGA
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| XP_022923151.1 DNA-directed RNA polymerases II, IV and V subunit 6A-like [Cucurbita moschata] | 6.4e-67 | 94.41 | Show/hide |
Query: MADDDYNDPDMGYEDEPPEPEMEDGAEEELDNNNNDDVPGEAVEDEGKEDAEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIA
MADDDYND DMGY+DEPPEPE+E+GAEEELDNNNNDDVPGE VE E KED EPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIA
Subjt: MADDDYNDPDMGYEDEPPEPEMEDGAEEELDNNNNDDVPGEAVEDEGKEDAEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIA
Query: MKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGA
MKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGA
Subjt: MKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGA
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| XP_022944842.1 DNA-directed RNA polymerases II, IV and V subunit 6A-like [Cucurbita moschata] | 8.3e-67 | 94.41 | Show/hide |
Query: MADDDYNDPDMGYEDEPPEPEMEDGAEEELDNNNNDDVPGEAVEDEGKEDAEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIA
MADDDYND DMGYEDEPPEPEME+GAEEELDNNN DDVPGE VE E KED EP+ERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIA
Subjt: MADDDYNDPDMGYEDEPPEPEMEDGAEEELDNNNNDDVPGEAVEDEGKEDAEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIA
Query: MKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGA
MKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGA
Subjt: MKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGA
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A6J1CI61 DNA-directed RNA polymerases II, IV and V subunit 6A | 9.0e-67 | 95.1 | Show/hide |
Query: MADDDYNDPDMGYEDEPPEPEMEDGAEEELDNNNNDDVPGEAVEDEGKEDAEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIA
MADDDYND DMGYEDEPPEPEME+GAEEELDNNNNDDV GE VE E KED EPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIA
Subjt: MADDDYNDPDMGYEDEPPEPEMEDGAEEELDNNNNDDVPGEAVEDEGKEDAEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIA
Query: MKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGA
MKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGA
Subjt: MKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGA
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| A0A6J1E614 DNA-directed RNA polymerases II, IV and V subunit 6A-like | 3.1e-67 | 94.41 | Show/hide |
Query: MADDDYNDPDMGYEDEPPEPEMEDGAEEELDNNNNDDVPGEAVEDEGKEDAEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIA
MADDDYND DMGY+DEPPEPE+E+GAEEELDNNNNDDVPGE VE E KED EPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIA
Subjt: MADDDYNDPDMGYEDEPPEPEMEDGAEEELDNNNNDDVPGEAVEDEGKEDAEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIA
Query: MKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGA
MKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGA
Subjt: MKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGA
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| A0A6J1FZ93 DNA-directed RNA polymerases II, IV and V subunit 6A-like | 4.0e-67 | 94.41 | Show/hide |
Query: MADDDYNDPDMGYEDEPPEPEMEDGAEEELDNNNNDDVPGEAVEDEGKEDAEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIA
MADDDYND DMGYEDEPPEPEME+GAEEELDNNN DDVPGE VE E KED EP+ERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIA
Subjt: MADDDYNDPDMGYEDEPPEPEMEDGAEEELDNNNNDDVPGEAVEDEGKEDAEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIA
Query: MKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGA
MKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGA
Subjt: MKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGA
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| A0A6J1HXF2 DNA-directed RNA polymerases II, IV and V subunit 6A-like | 4.0e-67 | 94.41 | Show/hide |
Query: MADDDYNDPDMGYEDEPPEPEMEDGAEEELDNNNNDDVPGEAVEDEGKEDAEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIA
MADDDYND DMGYEDEPPEPEME+GAEEELDNNN DDVPGE VE E KED EP+ERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIA
Subjt: MADDDYNDPDMGYEDEPPEPEMEDGAEEELDNNNNDDVPGEAVEDEGKEDAEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIA
Query: MKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGA
MKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGA
Subjt: MKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGA
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| A0A6J1J2R7 DNA-directed RNA polymerases II, IV and V subunit 6A-like | 3.1e-67 | 94.41 | Show/hide |
Query: MADDDYNDPDMGYEDEPPEPEMEDGAEEELDNNNNDDVPGEAVEDEGKEDAEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIA
MADDDYND DMGY+DEPPEPE+E+GAEEELDNNNNDDVPGE VE E KED EPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIA
Subjt: MADDDYNDPDMGYEDEPPEPEMEDGAEEELDNNNNDDVPGEAVEDEGKEDAEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIA
Query: MKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGA
MKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGA
Subjt: MKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGA
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| O88828 DNA-directed RNA polymerases I, II, and III subunit RPABC2 | 1.9e-29 | 60.16 | Show/hide |
Query: EEELDNNNNDDVPG-------EAVEDEGKEDAE--------PVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPF
E+ D ++ DDV E E+EG+E+ E + R T+ +MTKYERAR+LGTRALQI+M APVMVELEGETDPL IAMKEL+ RKIP
Subjt: EEELDNNNNDDVPG-------EAVEDEGKEDAE--------PVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPF
Query: TIRRYLPDGSYEDWGVDELIVED
IRRYLPDGSYEDWGVDELI+ D
Subjt: TIRRYLPDGSYEDWGVDELIVED
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| P61217 DNA-directed RNA polymerases I, II, and III subunit RPABC2 | 2.5e-29 | 60.16 | Show/hide |
Query: EEELDNNNNDDVPG-------EAVEDEGKEDAE--------PVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPF
E+ D ++ DDV E E+EG+E+ E + R T+ +MTKYERAR+LGTRALQI+M APVMVELEGETDPL IAMKEL+ RKIP
Subjt: EEELDNNNNDDVPG-------EAVEDEGKEDAE--------PVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPF
Query: TIRRYLPDGSYEDWGVDELIVED
IRRYLPDGSYEDWGVDELI+ D
Subjt: TIRRYLPDGSYEDWGVDELIVED
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| P61219 DNA-directed RNA polymerases I, II, and III subunit RPABC2 | 1.9e-29 | 60.16 | Show/hide |
Query: EEELDNNNNDDVPG-------EAVEDEGKEDAE--------PVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPF
E+ D ++ DDV E E+EG+E+ E + R T+ +MTKYERAR+LGTRALQI+M APVMVELEGETDPL IAMKEL+ RKIP
Subjt: EEELDNNNNDDVPG-------EAVEDEGKEDAE--------PVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELRERKIPF
Query: TIRRYLPDGSYEDWGVDELIVED
IRRYLPDGSYEDWGVDELI+ D
Subjt: TIRRYLPDGSYEDWGVDELIVED
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| Q9FJ98 DNA-directed RNA polymerases II, IV and V subunit 6A | 3.3e-58 | 81.12 | Show/hide |
Query: MADDDYND-PDMGYEDEPPEPEMEDGAEEELDNNNNDDVPGEAVEDEGKEDAEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEI
MAD+DYND D+GYEDEP EPE+E+G EE+++ NDDV GE +E E K + EPV+R RKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEI
Subjt: MADDDYND-PDMGYEDEPPEPEMEDGAEEELDNNNNDDVPGEAVEDEGKEDAEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEI
Query: AMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGG
AMKELR+RKIPFTIRRYLPDGS+E+WGVDELIVEDSWKRQVGG
Subjt: AMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGG
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| Q9SJ96 DNA-directed RNA polymerases II and V subunit 6B | 3.1e-56 | 80.42 | Show/hide |
Query: MADDDYND-PDMGYEDEPPEPEMEDGAEEELDNNNNDDVPGEAVEDEGKEDAEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEI
MADDDYN+ D+GYEDEP EPE+E+G EE+ D NDDV + +E E K + EPV+R RKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEI
Subjt: MADDDYND-PDMGYEDEPPEPEMEDGAEEELDNNNNDDVPGEAVEDEGKEDAEPVERVRKTSKFMTKYERARILGTRALQISMNAPVMVELEGETDPLEI
Query: AMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGG
AMKELR+RKIPFTIRRYLPD SYE+WGVDELIVEDSWKRQVGG
Subjt: AMKELRERKIPFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGG
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