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Sed0012100 (gene) of Chayote v1 genome

Gene IDSed0012100
OrganismSechium edule (Chayote v1)
DescriptionGTPase IMAP family member 1, putative
Genome locationLG08:35468363..35468842
RNA-Seq ExpressionSed0012100
SyntenySed0012100
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB1219398.1 hypothetical protein CJ030_MR3G001119 [Morella rubra]2.6e-0840.65Show/hide
Query:  TSDLEEQRRPI-TVAERLMQWEKMMVTFCAASAIAIATLSVQIQTKLPFMFHFLSVALMSCFAFTATAKLIHHQSQRVSQILYCFGGFWFVTAFFLAIAI
        T DLE QR P  +VA + ++W K+++ FC ASA++IA  S+QIQ+ LP   H LS+A++  F+    AK +  +    +++L     F     FFLAIAI
Subjt:  TSDLEEQRRPI-TVAERLMQWEKMMVTFCAASAIAIATLSVQIQTKLPFMFHFLSVALMSCFAFTATAKLIHHQSQRVSQILYCFGGFWFVTAFFLAIAI

Query:  PYSFHFQIITFAIYLIFLFITFI
        P   HFQ  T+AI  I L    I
Subjt:  PYSFHFQIITFAIYLIFLFITFI

KAB1219414.1 hypothetical protein CJ030_MR3G001103 [Morella rubra]1.2e-0840.68Show/hide
Query:  TSDLEEQRRPI-TVAERLMQWEKMMVTFCAASAIAIATLSVQIQTKLPFMFHFLSVALMSCFAFTATAKLIHHQSQRVSQILYCFGGFWFVTAFFLAIAI
        T DLE QR P  +VA + ++W+K+++ FC ASA++IA  S+QIQ+ LP   H LS+A++  F+    AK +  +   V+++L     F     FFLAIAI
Subjt:  TSDLEEQRRPI-TVAERLMQWEKMMVTFCAASAIAIATLSVQIQTKLPFMFHFLSVALMSCFAFTATAKLIHHQSQRVSQILYCFGGFWFVTAFFLAIAI

Query:  PYSFHFQIITFAIYLIFL
        P   H +  T+AI  I L
Subjt:  PYSFHFQIITFAIYLIFL

KAE8652531.1 hypothetical protein Csa_013077, partial [Cucumis sativus]5.5e-1144.32Show/hide
Query:  AERLMQWEKMMVTFCAASAIAIATLSVQIQTKLPFMFHFLSVALMSCFAFTATAKLIHHQSQRVSQILYCFGGFWFVTAFFLAIAIPY
        AE + +W+ M++ FC +SAI IAT+SV I+T+LP  F  LS+A++ CF     A++I+   + +S+ILYC GG  + ++ F+A AIPY
Subjt:  AERLMQWEKMMVTFCAASAIAIATLSVQIQTKLPFMFHFLSVALMSCFAFTATAKLIHHQSQRVSQILYCFGGFWFVTAFFLAIAIPY

KAG6572911.1 hypothetical protein SDJN03_26798, partial [Cucurbita argyrosperma subsp. sororia]9.4e-1953.04Show/hide
Query:  ITVAERLMQWEKMMVTFCAASAIAIATLSVQIQTKLPFMFHFLSVALMSCFAFTATAKLIHHQSQRVSQILYCFGGFWFVTAFFLAIAIPYSFHFQIITF
        +  AE + +W+ M+V FC +SAIAIAT+SVQI+ KLP +F+FLS+ L+ CF F A  K+     +RVS+ILYC GG   VTA F+A AIPY+ +FQII F
Subjt:  ITVAERLMQWEKMMVTFCAASAIAIATLSVQIQTKLPFMFHFLSVALMSCFAFTATAKLIHHQSQRVSQILYCFGGFWFVTAFFLAIAIPYSFHFQIITF

Query:  AIYLIF-LFITFISH
         IYLIF L    ++H
Subjt:  AIYLIF-LFITFISH

KAG6584385.1 hypothetical protein SDJN03_20317, partial [Cucurbita argyrosperma subsp. sororia]3.7e-3167.2Show/hide
Query:  EPTSDLEEQRRPITVAERLMQWEKMMVTFCAASAIAIATLSVQIQTKLPFMFHFLSVALMSCFAFTATAKLIHHQSQRVSQILYCFGGFWFVTAFFLAIA
        E     E Q RP++  E LMQWE MMVTFC  +AIAIAT+SVQIQTKL  MF FLS ALM CF FT +AKLI H  QRVS ILY  GGF FVTAFF+AIA
Subjt:  EPTSDLEEQRRPITVAERLMQWEKMMVTFCAASAIAIATLSVQIQTKLPFMFHFLSVALMSCFAFTATAKLIHHQSQRVSQILYCFGGFWFVTAFFLAIA

Query:  IPYSFHFQIITFAIYLIFLFITFIS
        IPY+FHFQI+T A+YL+FLFI   S
Subjt:  IPYSFHFQIITFAIYLIFLFITFIS

TrEMBL top hitse value%identityAlignment
A0A0A0LCY2 Uncharacterized protein1.5e-1447.79Show/hide
Query:  VAERLMQWEKMMVTFCAASAIAIATLSVQIQTKLPFMFHFLSVALMSCFAFTATAKLIHHQSQRVSQILYCFGGFWFVTAFFLAIAIPYSFHFQIITFAI
        VAE + + ++M++ FC +SAI IAT+SVQ +TKLP  F FLS+A++ CF     A++I    + +S+ILYCFGGF   T  F+A AIPY  HF II   +
Subjt:  VAERLMQWEKMMVTFCAASAIAIATLSVQIQTKLPFMFHFLSVALMSCFAFTATAKLIHHQSQRVSQILYCFGGFWFVTAFFLAIAIPYSFHFQIITFAI

Query:  YLIF--LFITFIS
        Y IF  +F+  IS
Subjt:  YLIF--LFITFIS

A0A0A0LQB6 Uncharacterized protein1.9e-1750.88Show/hide
Query:  RRPITVAERLMQWEKMMVTFCAASAIAIATLSVQIQT--KLPFMFHFLSVALMSCFAFTATAKLIHHQSQRVSQILYCFGGFWFVTAFFLAIAIPYSFHF
        R+   VAE + +W++M+V  C +SAI IAT+SVQI+T  +LP  F FLS+ ++ CF F   AK+     + VS+ILYC GGF  VTAFF+A AIP++ +F
Subjt:  RRPITVAERLMQWEKMMVTFCAASAIAIATLSVQIQT--KLPFMFHFLSVALMSCFAFTATAKLIHHQSQRVSQILYCFGGFWFVTAFFLAIAIPYSFHF

Query:  QIITFAIYLIFLFI
        QII F +YL+F FI
Subjt:  QIITFAIYLIFLFI

A0A0A0LSX4 Uncharacterized protein2.0e-1143.48Show/hide
Query:  AERLMQWEKMMVTFCAASAIAIATLSVQIQTKLPFMFHFLSVALMSCFAFTATAKLIHHQSQRVSQILYCFGGFWFVTAFFLAIAIPYSFHF
        AE + +W+ M++ FC +SAI IAT+SV I+T+LP  F  LS+A++ CF     A++I+   + +S+ILYC GG  + ++ F+A AIPY+  F
Subjt:  AERLMQWEKMMVTFCAASAIAIATLSVQIQTKLPFMFHFLSVALMSCFAFTATAKLIHHQSQRVSQILYCFGGFWFVTAFFLAIAIPYSFHF

A0A6A1W2E2 Uncharacterized protein5.6e-0940.68Show/hide
Query:  TSDLEEQRRPI-TVAERLMQWEKMMVTFCAASAIAIATLSVQIQTKLPFMFHFLSVALMSCFAFTATAKLIHHQSQRVSQILYCFGGFWFVTAFFLAIAI
        T DLE QR P  +VA + ++W+K+++ FC ASA++IA  S+QIQ+ LP   H LS+A++  F+    AK +  +   V+++L     F     FFLAIAI
Subjt:  TSDLEEQRRPI-TVAERLMQWEKMMVTFCAASAIAIATLSVQIQTKLPFMFHFLSVALMSCFAFTATAKLIHHQSQRVSQILYCFGGFWFVTAFFLAIAI

Query:  PYSFHFQIITFAIYLIFL
        P   H +  T+AI  I L
Subjt:  PYSFHFQIITFAIYLIFL

A0A7N2R866 Uncharacterized protein3.2e-1242.86Show/hide
Query:  MQWEKMMVTFCAASAIAIATLSVQIQTKLPFMFHFLSVALMSCFAFTATAKLIHHQSQRVSQILYCFGGFWFVTAFFLAIAIPYSFHFQIITFAIYLI
        M+W ++++ FC ASA+ IA LSVQ+ T+LP +FH  S+A++  FA    +K I+ +  R +Q+L  FG F+ VTAFF+AI IP+ F+ +  ++ +Y I
Subjt:  MQWEKMMVTFCAASAIAIATLSVQIQTKLPFMFHFLSVALMSCFAFTATAKLIHHQSQRVSQILYCFGGFWFVTAFFLAIAIPYSFHFQIITFAIYLI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAAGAATTGTAAATGCCACCAAAACATTTTTTCTTGAGACCCTCTCAAGAATAACCACATGGATTACTATTAATATTGTTTCCATGTTCGAACCCACCAGTGACTT
AGAGGAGCAGCGGCGACCGATCACAGTGGCGGAGAGGTTAATGCAATGGGAAAAAATGATGGTTACATTTTGCGCAGCCTCGGCCATTGCCATAGCCACCCTGTCTGTCC
AAATTCAAACCAAGTTGCCTTTCATGTTTCATTTTCTATCCGTTGCGTTAATGAGCTGCTTTGCTTTCACAGCCACAGCCAAACTCATTCACCACCAAAGCCAAAGGGTT
TCTCAAATTCTGTACTGTTTTGGTGGGTTTTGGTTCGTCACTGCCTTCTTTTTGGCCATTGCCATTCCTTATTCATTTCACTTTCAAATTATAACCTTCGCCATCTATCT
CATTTTTTTATTCATTACTTTTATCTCCCATTTCACTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGAAGAATTGTAAATGCCACCAAAACATTTTTTCTTGAGACCCTCTCAAGAATAACCACATGGATTACTATTAATATTGTTTCCATGTTCGAACCCACCAGTGACTT
AGAGGAGCAGCGGCGACCGATCACAGTGGCGGAGAGGTTAATGCAATGGGAAAAAATGATGGTTACATTTTGCGCAGCCTCGGCCATTGCCATAGCCACCCTGTCTGTCC
AAATTCAAACCAAGTTGCCTTTCATGTTTCATTTTCTATCCGTTGCGTTAATGAGCTGCTTTGCTTTCACAGCCACAGCCAAACTCATTCACCACCAAAGCCAAAGGGTT
TCTCAAATTCTGTACTGTTTTGGTGGGTTTTGGTTCGTCACTGCCTTCTTTTTGGCCATTGCCATTCCTTATTCATTTCACTTTCAAATTATAACCTTCGCCATCTATCT
CATTTTTTTATTCATTACTTTTATCTCCCATTTCACTTAG
Protein sequenceShow/hide protein sequence
MRRIVNATKTFFLETLSRITTWITINIVSMFEPTSDLEEQRRPITVAERLMQWEKMMVTFCAASAIAIATLSVQIQTKLPFMFHFLSVALMSCFAFTATAKLIHHQSQRV
SQILYCFGGFWFVTAFFLAIAIPYSFHFQIITFAIYLIFLFITFISHFT