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Sed0012102 (gene) of Chayote v1 genome

Gene IDSed0012102
OrganismSechium edule (Chayote v1)
DescriptionAIR carboxylase
Genome locationLG03:181186..182547
RNA-Seq ExpressionSed0012102
SyntenySed0012102
Gene Ontology termsGO:0006189 - 'de novo' IMP biosynthetic process (biological process)
GO:0004638 - phosphoribosylaminoimidazole carboxylase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0043727 - 5-amino-4-imidazole carboxylate lyase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR000031 - PurE domain
IPR024694 - PurE, prokaryotic type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7033417.1 Phosphoribosylaminoimidazole carboxylase, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]4.2e-5077.63Show/hide
Query:  MGSDSDFPVMRDAAKILDTFGVPYEIKLVSAHCTPDSMFSFASSAQERGIQIIIV---GMDASLTSLPVICVSVRASTLDGIDSLLSIVQMPRGVPVATV
        MGSDSDFPVMRDAAK+LDTFG PYEIK+VSAH TP  MFS+ASSAQERGIQIII    GM ASLT LPVI V VRASTLDGIDSLLSIVQMPRGVPVATV
Subjt:  MGSDSDFPVMRDAAKILDTFGVPYEIKLVSAHCTPDSMFSFASSAQERGIQIIIV---GMDASLTSLPVICVSVRASTLDGIDSLLSIVQMPRGVPVATV

Query:  AINNATNAGSCCT-LIG----PTLKVISQFQEDTNKNVLSKAEKLEKDGWEV
        AINNATNAG     ++G      L  +SQFQEDT KNVLSKAEKLEKDGW++
Subjt:  AINNATNAGSCCT-LIG----PTLKVISQFQEDTNKNVLSKAEKLEKDGWEV

XP_022990845.1 phosphoribosylaminoimidazole carboxylase, chloroplastic-like isoform X1 [Cucurbita maxima]5.5e-5075.32Show/hide
Query:  MGSDSDFPVMRDAAKILDTFGVPYEIKLVSAHCTPDSMFSFASSAQERGIQIIIV---------GMDASLTSLPVICVSVRASTLDGIDSLLSIVQMPRG
        MGSDSDFPVMRDAAK+LDTFGVPYEIK+VSAH TP  MFS+ASSAQERGIQIII          GM ASLT LPVI V VRASTLDGIDSLLSIVQMPRG
Subjt:  MGSDSDFPVMRDAAKILDTFGVPYEIKLVSAHCTPDSMFSFASSAQERGIQIIIV---------GMDASLTSLPVICVSVRASTLDGIDSLLSIVQMPRG

Query:  VPVATVAINNATNAGSCCT-LIG----PTLKVISQFQEDTNKNVLSKAEKLEKDGWEV
        VPVATVAINNATNAG     ++G      L  +SQFQEDT KNVLSKAEKLEKDGW++
Subjt:  VPVATVAINNATNAGSCCT-LIG----PTLKVISQFQEDTNKNVLSKAEKLEKDGWEV

XP_022990847.1 phosphoribosylaminoimidazole carboxylase, chloroplastic-like isoform X2 [Cucurbita maxima]5.5e-5075.32Show/hide
Query:  MGSDSDFPVMRDAAKILDTFGVPYEIKLVSAHCTPDSMFSFASSAQERGIQIIIV---------GMDASLTSLPVICVSVRASTLDGIDSLLSIVQMPRG
        MGSDSDFPVMRDAAK+LDTFGVPYEIK+VSAH TP  MFS+ASSAQERGIQIII          GM ASLT LPVI V VRASTLDGIDSLLSIVQMPRG
Subjt:  MGSDSDFPVMRDAAKILDTFGVPYEIKLVSAHCTPDSMFSFASSAQERGIQIIIV---------GMDASLTSLPVICVSVRASTLDGIDSLLSIVQMPRG

Query:  VPVATVAINNATNAGSCCT-LIG----PTLKVISQFQEDTNKNVLSKAEKLEKDGWEV
        VPVATVAINNATNAG     ++G      L  +SQFQEDT KNVLSKAEKLEKDGW++
Subjt:  VPVATVAINNATNAGSCCT-LIG----PTLKVISQFQEDTNKNVLSKAEKLEKDGWEV

XP_023550034.1 phosphoribosylaminoimidazole carboxylase, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo]4.2e-5075.32Show/hide
Query:  MGSDSDFPVMRDAAKILDTFGVPYEIKLVSAHCTPDSMFSFASSAQERGIQIIIV---------GMDASLTSLPVICVSVRASTLDGIDSLLSIVQMPRG
        MGSDSDFPVMRDAAK+LDTFGVPYEIK+VSAH TP  MFS+ASSAQERGIQIII          GM ASLT LPVI V VRASTLDGIDSLLSIVQMPRG
Subjt:  MGSDSDFPVMRDAAKILDTFGVPYEIKLVSAHCTPDSMFSFASSAQERGIQIIIV---------GMDASLTSLPVICVSVRASTLDGIDSLLSIVQMPRG

Query:  VPVATVAINNATNAGSCCT-LIG----PTLKVISQFQEDTNKNVLSKAEKLEKDGWEV
        VPVATVAINNATNAG     ++G      L  +SQFQEDT KNVLSKAEKLEKDGW++
Subjt:  VPVATVAINNATNAGSCCT-LIG----PTLKVISQFQEDTNKNVLSKAEKLEKDGWEV

XP_023550049.1 phosphoribosylaminoimidazole carboxylase, chloroplastic-like isoform X2 [Cucurbita pepo subsp. pepo]4.2e-5075.32Show/hide
Query:  MGSDSDFPVMRDAAKILDTFGVPYEIKLVSAHCTPDSMFSFASSAQERGIQIIIV---------GMDASLTSLPVICVSVRASTLDGIDSLLSIVQMPRG
        MGSDSDFPVMRDAAK+LDTFGVPYEIK+VSAH TP  MFS+ASSAQERGIQIII          GM ASLT LPVI V VRASTLDGIDSLLSIVQMPRG
Subjt:  MGSDSDFPVMRDAAKILDTFGVPYEIKLVSAHCTPDSMFSFASSAQERGIQIIIV---------GMDASLTSLPVICVSVRASTLDGIDSLLSIVQMPRG

Query:  VPVATVAINNATNAGSCCT-LIG----PTLKVISQFQEDTNKNVLSKAEKLEKDGWEV
        VPVATVAINNATNAG     ++G      L  +SQFQEDT KNVLSKAEKLEKDGW++
Subjt:  VPVATVAINNATNAGSCCT-LIG----PTLKVISQFQEDTNKNVLSKAEKLEKDGWEV

TrEMBL top hitse value%identityAlignment
A0A1S3B3J7 AIR carboxylase5.9e-5072.78Show/hide
Query:  MGSDSDFPVMRDAAKILDTFGVPYEIKLVSAHCTPDSMFSFASSAQERGIQIIIV---------GMDASLTSLPVICVSVRASTLDGIDSLLSIVQMPRG
        MGSDSDFPVMRDAAK+LDTFGVPYEIK+VSAH TPD MFS+ASSAQERGI++II          GM ASLT LPVI V VRAS LDG+DSLLSIVQMPRG
Subjt:  MGSDSDFPVMRDAAKILDTFGVPYEIKLVSAHCTPDSMFSFASSAQERGIQIIIV---------GMDASLTSLPVICVSVRASTLDGIDSLLSIVQMPRG

Query:  VPVATVAINNATNAGSCCTLI-----GPTLKVISQFQEDTNKNVLSKAEKLEKDGWEV
        VPVATVAINNATNAG     +        L  +SQFQEDT KNVLSKAEKLEKDGW++
Subjt:  VPVATVAINNATNAGSCCTLI-----GPTLKVISQFQEDTNKNVLSKAEKLEKDGWEV

A0A1S4DTU8 AIR carboxylase5.9e-5072.78Show/hide
Query:  MGSDSDFPVMRDAAKILDTFGVPYEIKLVSAHCTPDSMFSFASSAQERGIQIIIV---------GMDASLTSLPVICVSVRASTLDGIDSLLSIVQMPRG
        MGSDSDFPVMRDAAK+LDTFGVPYEIK+VSAH TPD MFS+ASSAQERGI++II          GM ASLT LPVI V VRAS LDG+DSLLSIVQMPRG
Subjt:  MGSDSDFPVMRDAAKILDTFGVPYEIKLVSAHCTPDSMFSFASSAQERGIQIIIV---------GMDASLTSLPVICVSVRASTLDGIDSLLSIVQMPRG

Query:  VPVATVAINNATNAGSCCTLI-----GPTLKVISQFQEDTNKNVLSKAEKLEKDGWEV
        VPVATVAINNATNAG     +        L  +SQFQEDT KNVLSKAEKLEKDGW++
Subjt:  VPVATVAINNATNAGSCCTLI-----GPTLKVISQFQEDTNKNVLSKAEKLEKDGWEV

A0A5D3C3X4 AIR carboxylase5.9e-5072.78Show/hide
Query:  MGSDSDFPVMRDAAKILDTFGVPYEIKLVSAHCTPDSMFSFASSAQERGIQIIIV---------GMDASLTSLPVICVSVRASTLDGIDSLLSIVQMPRG
        MGSDSDFPVMRDAAK+LDTFGVPYEIK+VSAH TPD MFS+ASSAQERGI++II          GM ASLT LPVI V VRAS LDG+DSLLSIVQMPRG
Subjt:  MGSDSDFPVMRDAAKILDTFGVPYEIKLVSAHCTPDSMFSFASSAQERGIQIIIV---------GMDASLTSLPVICVSVRASTLDGIDSLLSIVQMPRG

Query:  VPVATVAINNATNAGSCCTLI-----GPTLKVISQFQEDTNKNVLSKAEKLEKDGWEV
        VPVATVAINNATNAG     +        L  +SQFQEDT KNVLSKAEKLEKDGW++
Subjt:  VPVATVAINNATNAGSCCTLI-----GPTLKVISQFQEDTNKNVLSKAEKLEKDGWEV

A0A6J1JP32 AIR carboxylase2.6e-5075.32Show/hide
Query:  MGSDSDFPVMRDAAKILDTFGVPYEIKLVSAHCTPDSMFSFASSAQERGIQIIIV---------GMDASLTSLPVICVSVRASTLDGIDSLLSIVQMPRG
        MGSDSDFPVMRDAAK+LDTFGVPYEIK+VSAH TP  MFS+ASSAQERGIQIII          GM ASLT LPVI V VRASTLDGIDSLLSIVQMPRG
Subjt:  MGSDSDFPVMRDAAKILDTFGVPYEIKLVSAHCTPDSMFSFASSAQERGIQIIIV---------GMDASLTSLPVICVSVRASTLDGIDSLLSIVQMPRG

Query:  VPVATVAINNATNAGSCCT-LIG----PTLKVISQFQEDTNKNVLSKAEKLEKDGWEV
        VPVATVAINNATNAG     ++G      L  +SQFQEDT KNVLSKAEKLEKDGW++
Subjt:  VPVATVAINNATNAGSCCT-LIG----PTLKVISQFQEDTNKNVLSKAEKLEKDGWEV

A0A6J1JUH4 AIR carboxylase2.6e-5075.32Show/hide
Query:  MGSDSDFPVMRDAAKILDTFGVPYEIKLVSAHCTPDSMFSFASSAQERGIQIIIV---------GMDASLTSLPVICVSVRASTLDGIDSLLSIVQMPRG
        MGSDSDFPVMRDAAK+LDTFGVPYEIK+VSAH TP  MFS+ASSAQERGIQIII          GM ASLT LPVI V VRASTLDGIDSLLSIVQMPRG
Subjt:  MGSDSDFPVMRDAAKILDTFGVPYEIKLVSAHCTPDSMFSFASSAQERGIQIIIV---------GMDASLTSLPVICVSVRASTLDGIDSLLSIVQMPRG

Query:  VPVATVAINNATNAGSCCT-LIG----PTLKVISQFQEDTNKNVLSKAEKLEKDGWEV
        VPVATVAINNATNAG     ++G      L  +SQFQEDT KNVLSKAEKLEKDGW++
Subjt:  VPVATVAINNATNAGSCCT-LIG----PTLKVISQFQEDTNKNVLSKAEKLEKDGWEV

SwissProt top hitse value%identityAlignment
O58058 N5-carboxyaminoimidazole ribonucleotide mutase3.7e-3350.32Show/hide
Query:  MGSDSDFPVMRDAAKILDTFGVPYEIKLVSAHCTPDSMFSFASSAQERGIQIIIV---------GMDASLTSLPVICVSVRASTLDGIDSLLSIVQMPRG
        MGSDSD PVM++AA+IL+ FGVPYEI ++SAH TP+  + +A  A+ERGI++II          G+ ASLT LPVI V +++  L+G+DSLLSIVQMP G
Subjt:  MGSDSDFPVMRDAAKILDTFGVPYEIKLVSAHCTPDSMFSFASSAQERGIQIIIV---------GMDASLTSLPVICVSVRASTLDGIDSLLSIVQMPRG

Query:  VPVATVAINNATNAGSCCTLI----GPTLK-VISQFQEDTNKNVLSKAEKLEKDGWE
        +PVATVAI+NA NA      I     P +K  + ++ +D  + V  KA++LE+ GWE
Subjt:  VPVATVAINNATNAGSCCTLI----GPTLK-VISQFQEDTNKNVLSKAEKLEKDGWE

P0CQ36 Phosphoribosylaminoimidazole carboxylase2.2e-3350.96Show/hide
Query:  MGSDSDFPVMRDAAKILDTFGVPYEIKLVSAHCTPDSMFSFASSAQERGIQIIIV---------GMDASLTSLPVICVSVRASTLDGIDSLLSIVQMPRG
        MGSDSD PVM  A KIL+ FGVPYE+ + SAH TP+ M  +A +A +RG++ II          GM AS TSLPVI V V+AS LDG+DSL SIVQMPRG
Subjt:  MGSDSDFPVMRDAAKILDTFGVPYEIKLVSAHCTPDSMFSFASSAQERGIQIIIV---------GMDASLTSLPVICVSVRASTLDGIDSLLSIVQMPRG

Query:  VPVATVAINNATNAGSCCT-LIGPTLKVISQFQEDTNK----NVLSKAEKLEKDGWE
        +P ATV INN+TNA      ++G ++  +++  E+ +K     VL+KA+ LE++GW+
Subjt:  VPVATVAINNATNAGSCCT-LIGPTLKVISQFQEDTNK----NVLSKAEKLEKDGWE

P15567 Phosphoribosylaminoimidazole carboxylase2.0e-3454.14Show/hide
Query:  MGSDSDFPVMRDAAKILDTFGVPYEIKLVSAHCTPDSMFSFASSAQERGIQIIIV---------GMDASLTSLPVICVSVRASTLDGIDSLLSIVQMPRG
        MGSDSD   M+DAA ILD F VPYE+ +VSAH TPD M ++A +A  RG+++II          GM A++T LPVI V V+ STLDG+DSL SIVQMPRG
Subjt:  MGSDSDFPVMRDAAKILDTFGVPYEIKLVSAHCTPDSMFSFASSAQERGIQIIIV---------GMDASLTSLPVICVSVRASTLDGIDSLLSIVQMPRG

Query:  VPVATVAINNATNAGSCCTLIGPT-----LKVISQFQEDTNKNVLSKAEKLEKDGWE
        VPVATVAINN+ NAG     I  T     L  +  F ++  + VL KA+KLEK GW+
Subjt:  VPVATVAINNATNAGSCCTLIGPT-----LKVISQFQEDTNKNVLSKAEKLEKDGWE

P55195 Phosphoribosylaminoimidazole carboxylase, chloroplastic (Fragment)2.2e-4159.87Show/hide
Query:  MGSDSDFPVMRDAAKILDTFGVPYEIKLVSAHCTPDSMFSFASSAQERGIQIIIV---------GMDASLTSLPVICVSVRASTLDGIDSLLSIVQMPRG
        MGSDSD PVM+ AA++++ FGVP+E+++VSAH TP+ MF +ASSA ERG Q+II          GM ASLT LPV+ V VRASTLDG+DSLLSIVQMPRG
Subjt:  MGSDSDFPVMRDAAKILDTFGVPYEIKLVSAHCTPDSMFSFASSAQERGIQIIIV---------GMDASLTSLPVICVSVRASTLDGIDSLLSIVQMPRG

Query:  VPVATVAINNATNAGSCCT-LIGPT----LKVISQFQEDTNKNVLSKAEKLEKDGWE
        VPVATVA+NNATNAG     ++G      L  +SQ+QED  + VL + +KLEK GWE
Subjt:  VPVATVAINNATNAGSCCT-LIGPT----LKVISQFQEDTNKNVLSKAEKLEKDGWE

Q9WYS7 N5-carboxyaminoimidazole ribonucleotide mutase4.0e-3552.87Show/hide
Query:  MGSDSDFPVMRDAAKILDTFGVPYEIKLVSAHCTPDSMFSFASSAQERGIQIIIV---------GMDASLTSLPVICVSVRASTLDGIDSLLSIVQMPRG
        MGSDSD PVM+ AA+IL+ FG+ YEI +VSAH TPD MF +A +A+ERGI++II          GM AS+T LPVI V V+ STL+G+DSL SIVQMP G
Subjt:  MGSDSDFPVMRDAAKILDTFGVPYEIKLVSAHCTPDSMFSFASSAQERGIQIIIV---------GMDASLTSLPVICVSVRASTLDGIDSLLSIVQMPRG

Query:  VPVATVAINNATNAG-SCCTLIG----PTLKVISQFQEDTNKNVLSKAEKLEKDGWE
        VPVATVAINNA NAG    +++G       + + +++E   + VL KA++LE+ G++
Subjt:  VPVATVAINNATNAG-SCCTLIG----PTLKVISQFQEDTNKNVLSKAEKLEKDGWE

Arabidopsis top hitse value%identityAlignment
AT2G05140.1 phosphoribosylaminoimidazole carboxylase family protein / AIR carboxylase family protein4.6e-3956.69Show/hide
Query:  MGSDSDFPVMRDAAKILDTFGVPYEIKLVSAHCTPDSMFSFASSAQERGIQIIIV---------GMDASLTSLPVICVSVRASTLDGIDSLLSIVQMPRG
        MGSD+D  VM+DAAKILD FGV +E+K+VSAH TP+ M+++A+SA  RG+Q+II          GM ASLT LPVI V V+A+ LDG+DSLLSIVQMPRG
Subjt:  MGSDSDFPVMRDAAKILDTFGVPYEIKLVSAHCTPDSMFSFASSAQERGIQIIIV---------GMDASLTSLPVICVSVRASTLDGIDSLLSIVQMPRG

Query:  VPVATVAINNATNAGSCCTLI-----GPTLKVISQFQEDTNKNVLSKAEKLEKDGWE
        VPVATVAINNATNA      +        +  + Q+QED     L+K EKLE  GWE
Subjt:  VPVATVAINNATNAGSCCTLI-----GPTLKVISQFQEDTNKNVLSKAEKLEKDGWE

AT2G37690.1 phosphoribosylaminoimidazole carboxylase, putative / AIR carboxylase, putative6.5e-4158.6Show/hide
Query:  MGSDSDFPVMRDAAKILDTFGVPYEIKLVSAHCTPDSMFSFASSAQERGIQIIIV---------GMDASLTSLPVICVSVRASTLDGIDSLLSIVQMPRG
        MGSD+D PVM+DAAKILD FGV +E+K+VSAH TP+ M+++A+SA  RG+Q+II          GM ASLT LPVI V VRA+ LDG+DSLLSIVQMPRG
Subjt:  MGSDSDFPVMRDAAKILDTFGVPYEIKLVSAHCTPDSMFSFASSAQERGIQIIIV---------GMDASLTSLPVICVSVRASTLDGIDSLLSIVQMPRG

Query:  VPVATVAINNATNAGSCCT-LIG----PTLKVISQFQEDTNKNVLSKAEKLEKDGWE
        VPVATVAINNATNA      ++G      +  + Q+QED     L+K EKLE +GWE
Subjt:  VPVATVAINNATNAGSCCT-LIG----PTLKVISQFQEDTNKNVLSKAEKLEKDGWE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCTCTGATTCTGATTTTCCTGTTATGAGAGATGCTGCAAAGATCCTCGACACATTTGGTGTGCCTTACGAGATAAAGTTAGTTTCTGCACATTGTACCCCTGATTC
GATGTTTTCTTTTGCGTCATCAGCTCAAGAGAGAGGGATCCAGATTATCATTGTTGGTATGGATGCCTCTCTGACTTCGTTGCCTGTTATTTGTGTCTCTGTGCGTGCTT
CGACATTGGATGGAATCGACTCACTTCTGTCAATTGTGCAGATGCCGAGGGGAGTTCCGGTTGCTACTGTTGCAATCAATAACGCAACCAATGCTGGTTCCTGTTGTACT
CTGATAGGACCAACTCTCAAGGTGATCAGTCAATTTCAAGAAGATACCAACAAAAATGTATTGAGCAAAGCAGAAAAGTTGGAAAAAGATGGTTGGGAAGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGCTCTGATTCTGATTTTCCTGTTATGAGAGATGCTGCAAAGATCCTCGACACATTTGGTGTGCCTTACGAGATAAAGTTAGTTTCTGCACATTGTACCCCTGATTC
GATGTTTTCTTTTGCGTCATCAGCTCAAGAGAGAGGGATCCAGATTATCATTGTTGGTATGGATGCCTCTCTGACTTCGTTGCCTGTTATTTGTGTCTCTGTGCGTGCTT
CGACATTGGATGGAATCGACTCACTTCTGTCAATTGTGCAGATGCCGAGGGGAGTTCCGGTTGCTACTGTTGCAATCAATAACGCAACCAATGCTGGTTCCTGTTGTACT
CTGATAGGACCAACTCTCAAGGTGATCAGTCAATTTCAAGAAGATACCAACAAAAATGTATTGAGCAAAGCAGAAAAGTTGGAAAAAGATGGTTGGGAAGTTTAG
Protein sequenceShow/hide protein sequence
MGSDSDFPVMRDAAKILDTFGVPYEIKLVSAHCTPDSMFSFASSAQERGIQIIIVGMDASLTSLPVICVSVRASTLDGIDSLLSIVQMPRGVPVATVAINNATNAGSCCT
LIGPTLKVISQFQEDTNKNVLSKAEKLEKDGWEV