; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0012127 (gene) of Chayote v1 genome

Gene IDSed0012127
OrganismSechium edule (Chayote v1)
DescriptionRNA exonuclease 4
Genome locationLG04:37532892..37535787
RNA-Seq ExpressionSed0012127
SyntenySed0012127
Gene Ontology termsGO:0006364 - rRNA processing (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008408 - 3'-5' exonuclease activity (molecular function)
GO:0016740 - transferase activity (molecular function)
InterPro domainsIPR012337 - Ribonuclease H-like superfamily
IPR013520 - Exonuclease, RNase T/DNA polymerase III
IPR036397 - Ribonuclease H superfamily
IPR037431 - RNA exonuclease 4, DEDDh 3'-5' exonuclease domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8649831.1 hypothetical protein Csa_012901 [Cucumis sativus]3.1e-11283.59Show/hide
Query:  KKNPKPKQLNPNWALLQQKLKPHGRHAS----IHASSHNSVLGKRKQSPDVDSNHSLKKKLLIPANDDFSLTDVVAMDCEMVGVDQGNKSALGRVTLVNK
        KKNPKPK LNPNWALLQQKL PHG + S       +S  ++LGKRK+  DV+SNHS +K +LIP NDDFSLTD VAMDCEMVGV QGNKSALGRVTLVNK
Subjt:  KKNPKPKQLNPNWALLQQKLKPHGRHAS----IHASSHNSVLGKRKQSPDVDSNHSLKKKLLIPANDDFSLTDVVAMDCEMVGVDQGNKSALGRVTLVNK

Query:  WGNVIYDEFVRPMERIVDFRTHVSGIRPSDLKKAKDFPTVQKRVAELIKGKILVGHALSNDLKALLLSHPKKDVRDTSEYSFYQKEGCKRALRHLAADFL
        WGNVIYDEFVRP+ER+VDFRT +SGIRP DLKKAKDFPTVQKRVAELIKGK+LVGHAL NDLKALLLSHPK DVRDTSEY F+QKEGCKRALRHLAA+FL
Subjt:  WGNVIYDEFVRPMERIVDFRTHVSGIRPSDLKKAKDFPTVQKRVAELIKGKILVGHALSNDLKALLLSHPKKDVRDTSEYSFYQKEGCKRALRHLAADFL

Query:  GVEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKSEMKLKLKQKKRKPRKKSKDGG
         VEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVK+E KLKLKQKKRKPRKKSKDGG
Subjt:  GVEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKSEMKLKLKQKKRKPRKKSKDGG

XP_004146040.1 RNA exonuclease 4 [Cucumis sativus]9.5e-11483.72Show/hide
Query:  KKNPKPKQLNPNWALLQQKLKPHGRHAS----IHASSHNSVLGKRKQSPDVDSNHSLKKKLLIPANDDFSLTDVVAMDCEMVGVDQGNKSALGRVTLVNK
        KKNPKPK LNPNWALLQQKL PHG + S       +S  ++LGKRK+  DV+SNHS +K +LIP NDDFSLTD VAMDCEMVGV QGNKSALGRVTLVNK
Subjt:  KKNPKPKQLNPNWALLQQKLKPHGRHAS----IHASSHNSVLGKRKQSPDVDSNHSLKKKLLIPANDDFSLTDVVAMDCEMVGVDQGNKSALGRVTLVNK

Query:  WGNVIYDEFVRPMERIVDFRTHVSGIRPSDLKKAKDFPTVQKRVAELIKGKILVGHALSNDLKALLLSHPKKDVRDTSEYSFYQKEGCKRALRHLAADFL
        WGNVIYDEFVRP+ER+VDFRT +SGIRP DLKKAKDFPTVQKRVAELIKGK+LVGHAL NDLKALLLSHPK DVRDTSEY F+QKEGCKRALRHLAA+FL
Subjt:  WGNVIYDEFVRPMERIVDFRTHVSGIRPSDLKKAKDFPTVQKRVAELIKGKILVGHALSNDLKALLLSHPKKDVRDTSEYSFYQKEGCKRALRHLAADFL

Query:  GVEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKSEMKLKLKQKKRKPRKKSKDGGGF
         VEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVK+E KLKLKQKKRKPRKKSKDGGGF
Subjt:  GVEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKSEMKLKLKQKKRKPRKKSKDGGGF

XP_008463709.1 PREDICTED: RNA exonuclease 4 [Cucumis melo]1.5e-11483.46Show/hide
Query:  KKNPKPKQLNPNWALLQQKLKPHGRHASIHA------SSHNSVLGKRKQSPDVDSNHSLKKKLLIPANDDFSLTDVVAMDCEMVGVDQGNKSALGRVTLV
        KKNPKPK LNPNWA+LQQKLKPHG + S  +      +S  ++LGKRK+  DV+SNHS +K +LIP NDDFSLTD VAMDCEMVGV QGNKSALGRVTLV
Subjt:  KKNPKPKQLNPNWALLQQKLKPHGRHASIHA------SSHNSVLGKRKQSPDVDSNHSLKKKLLIPANDDFSLTDVVAMDCEMVGVDQGNKSALGRVTLV

Query:  NKWGNVIYDEFVRPMERIVDFRTHVSGIRPSDLKKAKDFPTVQKRVAELIKGKILVGHALSNDLKALLLSHPKKDVRDTSEYSFYQKEGCKRALRHLAAD
        NKWGNVIYDEFVRP+ER+VDFRT +SGIRP DLKKAKDFPTVQKRVAELIKGKILVGHAL NDLKALLLSHPK DVRDTSEY F+QKEGCKRALRHLAA+
Subjt:  NKWGNVIYDEFVRPMERIVDFRTHVSGIRPSDLKKAKDFPTVQKRVAELIKGKILVGHALSNDLKALLLSHPKKDVRDTSEYSFYQKEGCKRALRHLAAD

Query:  FLGVEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKSEMKLKLKQKKRKPRKKSKDGGGF
        FLGV+IQNGEHCPVEDARSAMLLYQKKRKEWEKSVK+E KLKLKQKKRKPRKKSKDGGGF
Subjt:  FLGVEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKSEMKLKLKQKKRKPRKKSKDGGGF

XP_022139347.1 RNA exonuclease 4 [Momordica charantia]5.8e-11181.47Show/hide
Query:  KKNPKPKQLNPNWALLQQKLKPHG----RHASI-HASSHNSVLGKRKQSPDVDSNHSLKKKLLIPANDDFSLTDVVAMDCEMVGVDQGNKSALGRVTLVN
        K +PKPKQ+NPNWALLQQKLK H     R +++    + NSVLGKRK+  DVDS  S  K LLIP NDDFS+TDVVAMDCEMVGV QGN+SALGRVTLVN
Subjt:  KKNPKPKQLNPNWALLQQKLKPHG----RHASI-HASSHNSVLGKRKQSPDVDSNHSLKKKLLIPANDDFSLTDVVAMDCEMVGVDQGNKSALGRVTLVN

Query:  KWGNVIYDEFVRPMERIVDFRTHVSGIRPSDLKKAKDFPTVQKRVAELIKGKILVGHALSNDLKALLLSHPKKDVRDTSEYSFYQKEGCKRALRHLAADF
        KWGNVIYDEFVRP+ER+VDFRT +SGIRP DLKKAKDFPTVQK+VA+LIKGKI+VGHAL ND KALLLSHPKKD+RDTSEY F+QKEGC+RALRHLAA+F
Subjt:  KWGNVIYDEFVRPMERIVDFRTHVSGIRPSDLKKAKDFPTVQKRVAELIKGKILVGHALSNDLKALLLSHPKKDVRDTSEYSFYQKEGCKRALRHLAADF

Query:  LGVEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKSEMKLKLKQKKRKPRKKSKDGGGF
        LGVEIQNGEHCP+EDARSAMLLYQKKRKEWEKS+KSEMKLKLKQKKRKPRKKSKDGGGF
Subjt:  LGVEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKSEMKLKLKQKKRKPRKKSKDGGGF

XP_038897122.1 RNA exonuclease 4 isoform X3 [Benincasa hispida]6.8e-11283.08Show/hide
Query:  KKNPKPKQLNPNWALLQQKLKP----HGRHASIHAS--SHNSVLGKRKQSPDVDSNHSLKKKLLIPANDDFSLTDVVAMDCEMVGVDQGNKSALGRVTLV
        KK  KPK LNPNWALLQQKLKP    H R +++  S  S  ++LGKRK+  DV+SNHS +K +LIP NDDFSLTDVVAMDCEMVGV QGNKSALGRVTLV
Subjt:  KKNPKPKQLNPNWALLQQKLKP----HGRHASIHAS--SHNSVLGKRKQSPDVDSNHSLKKKLLIPANDDFSLTDVVAMDCEMVGVDQGNKSALGRVTLV

Query:  NKWGNVIYDEFVRPMERIVDFRTHVSGIRPSDLKKAKDFPTVQKRVAELIKGKILVGHALSNDLKALLLSHPKKDVRDTSEYSFYQKEGCKRALRHLAAD
        NKWGNVIYDEFVRP+ER+VDFRT +SGIRPSDLKKAKDF TVQKRVAELIKGKILVGHAL NDLKALLLSHPK+DVRDTSEY F+QKEGC+RALRHLAA+
Subjt:  NKWGNVIYDEFVRPMERIVDFRTHVSGIRPSDLKKAKDFPTVQKRVAELIKGKILVGHALSNDLKALLLSHPKKDVRDTSEYSFYQKEGCKRALRHLAAD

Query:  FLGVEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKSEMKLKLKQKKRKPRKKSKDGGGF
        FLGVEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVK E+KLKLKQKKRK RKKSKDGGGF
Subjt:  FLGVEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKSEMKLKLKQKKRKPRKKSKDGGGF

TrEMBL top hitse value%identityAlignment
A0A0A0KZK3 RNA exonuclease 44.6e-11483.72Show/hide
Query:  KKNPKPKQLNPNWALLQQKLKPHGRHAS----IHASSHNSVLGKRKQSPDVDSNHSLKKKLLIPANDDFSLTDVVAMDCEMVGVDQGNKSALGRVTLVNK
        KKNPKPK LNPNWALLQQKL PHG + S       +S  ++LGKRK+  DV+SNHS +K +LIP NDDFSLTD VAMDCEMVGV QGNKSALGRVTLVNK
Subjt:  KKNPKPKQLNPNWALLQQKLKPHGRHAS----IHASSHNSVLGKRKQSPDVDSNHSLKKKLLIPANDDFSLTDVVAMDCEMVGVDQGNKSALGRVTLVNK

Query:  WGNVIYDEFVRPMERIVDFRTHVSGIRPSDLKKAKDFPTVQKRVAELIKGKILVGHALSNDLKALLLSHPKKDVRDTSEYSFYQKEGCKRALRHLAADFL
        WGNVIYDEFVRP+ER+VDFRT +SGIRP DLKKAKDFPTVQKRVAELIKGK+LVGHAL NDLKALLLSHPK DVRDTSEY F+QKEGCKRALRHLAA+FL
Subjt:  WGNVIYDEFVRPMERIVDFRTHVSGIRPSDLKKAKDFPTVQKRVAELIKGKILVGHALSNDLKALLLSHPKKDVRDTSEYSFYQKEGCKRALRHLAADFL

Query:  GVEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKSEMKLKLKQKKRKPRKKSKDGGGF
         VEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVK+E KLKLKQKKRKPRKKSKDGGGF
Subjt:  GVEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKSEMKLKLKQKKRKPRKKSKDGGGF

A0A1S3CJW0 RNA exonuclease 47.1e-11583.46Show/hide
Query:  KKNPKPKQLNPNWALLQQKLKPHGRHASIHA------SSHNSVLGKRKQSPDVDSNHSLKKKLLIPANDDFSLTDVVAMDCEMVGVDQGNKSALGRVTLV
        KKNPKPK LNPNWA+LQQKLKPHG + S  +      +S  ++LGKRK+  DV+SNHS +K +LIP NDDFSLTD VAMDCEMVGV QGNKSALGRVTLV
Subjt:  KKNPKPKQLNPNWALLQQKLKPHGRHASIHA------SSHNSVLGKRKQSPDVDSNHSLKKKLLIPANDDFSLTDVVAMDCEMVGVDQGNKSALGRVTLV

Query:  NKWGNVIYDEFVRPMERIVDFRTHVSGIRPSDLKKAKDFPTVQKRVAELIKGKILVGHALSNDLKALLLSHPKKDVRDTSEYSFYQKEGCKRALRHLAAD
        NKWGNVIYDEFVRP+ER+VDFRT +SGIRP DLKKAKDFPTVQKRVAELIKGKILVGHAL NDLKALLLSHPK DVRDTSEY F+QKEGCKRALRHLAA+
Subjt:  NKWGNVIYDEFVRPMERIVDFRTHVSGIRPSDLKKAKDFPTVQKRVAELIKGKILVGHALSNDLKALLLSHPKKDVRDTSEYSFYQKEGCKRALRHLAAD

Query:  FLGVEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKSEMKLKLKQKKRKPRKKSKDGGGF
        FLGV+IQNGEHCPVEDARSAMLLYQKKRKEWEKSVK+E KLKLKQKKRKPRKKSKDGGGF
Subjt:  FLGVEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKSEMKLKLKQKKRKPRKKSKDGGGF

A0A6J1CDP9 RNA exonuclease 42.8e-11181.47Show/hide
Query:  KKNPKPKQLNPNWALLQQKLKPHG----RHASI-HASSHNSVLGKRKQSPDVDSNHSLKKKLLIPANDDFSLTDVVAMDCEMVGVDQGNKSALGRVTLVN
        K +PKPKQ+NPNWALLQQKLK H     R +++    + NSVLGKRK+  DVDS  S  K LLIP NDDFS+TDVVAMDCEMVGV QGN+SALGRVTLVN
Subjt:  KKNPKPKQLNPNWALLQQKLKPHG----RHASI-HASSHNSVLGKRKQSPDVDSNHSLKKKLLIPANDDFSLTDVVAMDCEMVGVDQGNKSALGRVTLVN

Query:  KWGNVIYDEFVRPMERIVDFRTHVSGIRPSDLKKAKDFPTVQKRVAELIKGKILVGHALSNDLKALLLSHPKKDVRDTSEYSFYQKEGCKRALRHLAADF
        KWGNVIYDEFVRP+ER+VDFRT +SGIRP DLKKAKDFPTVQK+VA+LIKGKI+VGHAL ND KALLLSHPKKD+RDTSEY F+QKEGC+RALRHLAA+F
Subjt:  KWGNVIYDEFVRPMERIVDFRTHVSGIRPSDLKKAKDFPTVQKRVAELIKGKILVGHALSNDLKALLLSHPKKDVRDTSEYSFYQKEGCKRALRHLAADF

Query:  LGVEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKSEMKLKLKQKKRKPRKKSKDGGGF
        LGVEIQNGEHCP+EDARSAMLLYQKKRKEWEKS+KSEMKLKLKQKKRKPRKKSKDGGGF
Subjt:  LGVEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKSEMKLKLKQKKRKPRKKSKDGGGF

A0A6J1FBB2 RNA exonuclease 41.2e-10982.1Show/hide
Query:  KKNPKPKQLNPNWALLQQKLKPHG--RHASIHAS--SHNSVLGKRKQSPDVDSNHSLKKKLLIPANDDFSLTDVVAMDCEMVGVDQGNKSALGRVTLVNK
        KK+ KPK LNPNWALLQQKL PHG  R +S+  S  S  ++LGKRK   D +S+HS  KKLLIP NDDFSLTDVVAMDCEMVGV QGNKSALGRVT+VNK
Subjt:  KKNPKPKQLNPNWALLQQKLKPHG--RHASIHAS--SHNSVLGKRKQSPDVDSNHSLKKKLLIPANDDFSLTDVVAMDCEMVGVDQGNKSALGRVTLVNK

Query:  WGNVIYDEFVRPMERIVDFRTHVSGIRPSDLKKAKDFPTVQKRVAELIKGKILVGHALSNDLKALLLSHPKKDVRDTSEYSFYQKEGCKRALRHLAADFL
        WGNVIYDEFVRP+ER+VDFRT +SGIRP DL+KAKDFPTVQKRVAELIKG+ILVGHAL NDLKALLLSHPKKDVRDTSEY F+Q+ GC+RALRHLAA+ L
Subjt:  WGNVIYDEFVRPMERIVDFRTHVSGIRPSDLKKAKDFPTVQKRVAELIKGKILVGHALSNDLKALLLSHPKKDVRDTSEYSFYQKEGCKRALRHLAADFL

Query:  GVEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKSEMKLKLKQKKRKPRKKSKDGGG
        GVEIQNGEHCPVEDARSAMLLYQKK KEWEKSVK+E+KLKLKQKKRKPRKKSKDGGG
Subjt:  GVEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKSEMKLKLKQKKRKPRKKSKDGGG

E5GBF8 RNA exonuclease 47.1e-11583.46Show/hide
Query:  KKNPKPKQLNPNWALLQQKLKPHGRHASIHA------SSHNSVLGKRKQSPDVDSNHSLKKKLLIPANDDFSLTDVVAMDCEMVGVDQGNKSALGRVTLV
        KKNPKPK LNPNWA+LQQKLKPHG + S  +      +S  ++LGKRK+  DV+SNHS +K +LIP NDDFSLTD VAMDCEMVGV QGNKSALGRVTLV
Subjt:  KKNPKPKQLNPNWALLQQKLKPHGRHASIHA------SSHNSVLGKRKQSPDVDSNHSLKKKLLIPANDDFSLTDVVAMDCEMVGVDQGNKSALGRVTLV

Query:  NKWGNVIYDEFVRPMERIVDFRTHVSGIRPSDLKKAKDFPTVQKRVAELIKGKILVGHALSNDLKALLLSHPKKDVRDTSEYSFYQKEGCKRALRHLAAD
        NKWGNVIYDEFVRP+ER+VDFRT +SGIRP DLKKAKDFPTVQKRVAELIKGKILVGHAL NDLKALLLSHPK DVRDTSEY F+QKEGCKRALRHLAA+
Subjt:  NKWGNVIYDEFVRPMERIVDFRTHVSGIRPSDLKKAKDFPTVQKRVAELIKGKILVGHALSNDLKALLLSHPKKDVRDTSEYSFYQKEGCKRALRHLAAD

Query:  FLGVEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKSEMKLKLKQKKRKPRKKSKDGGGF
        FLGV+IQNGEHCPVEDARSAMLLYQKKRKEWEKSVK+E KLKLKQKKRKPRKKSKDGGGF
Subjt:  FLGVEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKSEMKLKLKQKKRKPRKKSKDGGGF

SwissProt top hitse value%identityAlignment
Q4WHF8 RNA exonuclease 41.1e-4050.52Show/hide
Query:  VAMDCEMVGV--DQGNKSALGRVTLVNKWGNVIYDEFVRPMERIVDFRTHVSGIRPSDLKKAKDFPTVQKRVAELIKGKILVGHALSNDLKALLLSHPKK
        VAMDCEMVGV  +  N SAL RV++VN  G  +YD +VRP E I D+RTHVSGI P  + +A+    VQK VAE++ G+ILVGHA+SNDL ALLL HPK+
Subjt:  VAMDCEMVGV--DQGNKSALGRVTLVNKWGNVIYDEFVRPMERIVDFRTHVSGIRPSDLKKAKDFPTVQKRVAELIKGKILVGHALSNDLKALLLSHPKK

Query:  DVRDTSEYSFYQK--EGCKRALRHLAADFLGVEIQNGEHCPVEDARSAMLLYQKKR--------KEWEKSVKSEMK-----LKLKQKKRKPRKK
        D+RDTS++  Y+K   G    L+ LA++FLG+ IQ+G H  VEDA++ MLLY++ +        K+W   V  + K      K K+KK+KPRK+
Subjt:  DVRDTSEYSFYQK--EGCKRALRHLAADFLGVEIQNGEHCPVEDARSAMLLYQKKR--------KEWEKSVKSEMK-----LKLKQKKRKPRKK

Q6DEW6 RNA exonuclease 43.8e-4145.64Show/hide
Query:  KKLLIPANDDFSLTDVVAMDCEMVGVD-QGNKSALGRVTLVNKWGNVIYDEFVRPMERIVDFRTHVSGIRPSDLKKAKDFPTVQKRVAELIKGKILVGHA
        +K+L+       LT  VAMDCEMVGV   G +S L RV++VN +G  +YD++VRP ER+ D+RT VSGIRP D+K  + F  VQ  VAE+++G+ LVGHA
Subjt:  KKLLIPANDDFSLTDVVAMDCEMVGVD-QGNKSALGRVTLVNKWGNVIYDEFVRPMERIVDFRTHVSGIRPSDLKKAKDFPTVQKRVAELIKGKILVGHA

Query:  LSNDLKALLLSHPKKDVRDTSEYSFYQK--EGCKRALRHLAADFLGVEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKSEMKLKLKQKKRKPRK
        + NDLK L L HPKK +RDT +Y  +++  +  + +L+ L    L V++Q GEHC V+DA++AM LY  ++K WE ++K++       K + P+K
Subjt:  LSNDLKALLLSHPKKDVRDTSEYSFYQK--EGCKRALRHLAADFLGVEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKSEMKLKLKQKKRKPRK

Q6PAQ4 RNA exonuclease 41.7e-4147.88Show/hide
Query:  LTDVVAMDCEMVGV-DQGNKSALGRVTLVNKWGNVIYDEFVRPMERIVDFRTHVSGIRPSDLKKAKDFPTVQKRVAELIKGKILVGHALSNDLKALLLSH
        LT  +A+DCEMVGV  +G +S   RV++VN++G  +YD++V+P E + D+RT VSGIRP +LK+ ++F  V+K VAE++KG+ILVGHAL NDLK L L H
Subjt:  LTDVVAMDCEMVGV-DQGNKSALGRVTLVNKWGNVIYDEFVRPMERIVDFRTHVSGIRPSDLKKAKDFPTVQKRVAELIKGKILVGHALSNDLKALLLSH

Query:  PKKDVRDTSEYSFYQK--EGCKRALRHLAADFLGVEIQNGEHCPVEDARSAMLLYQKKRKEWEKS
        PKK +RDT ++  ++   +  + +L+ L+   LG+ +Q  EHC ++DA++AM LY   ++EWE S
Subjt:  PKKDVRDTSEYSFYQK--EGCKRALRHLAADFLGVEIQNGEHCPVEDARSAMLLYQKKRKEWEKS

Q91560 RNA exonuclease 41.6e-4245.93Show/hide
Query:  QSPDVDSNHSLKKKLLIPANDDFSLTDVVAMDCEMVGVD-QGNKSALGRVTLVNKWGNVIYDEFVRPMERIVDFRTHVSGIRPSDLKKAKDFPTVQKRVA
        +SP VD       K+L+       LT  VAMDCEMVGV   G +S L RV++VN +G  +YD++V+P ER+ D+RT VSGIRP D+KK + F  VQK V+
Subjt:  QSPDVDSNHSLKKKLLIPANDDFSLTDVVAMDCEMVGVD-QGNKSALGRVTLVNKWGNVIYDEFVRPMERIVDFRTHVSGIRPSDLKKAKDFPTVQKRVA

Query:  ELIKGKILVGHALSNDLKALLLSHPKKDVRDTSEYS-FYQK-EGCKRALRHLAADFLGVEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKSEMK--LKL
        E+++G+ LVGHA+ NDLK L L HPKK +RDT +Y  F QK +  + +L+ L    L V++Q GEHC V+DA++AM LY  ++K WE ++K++    + +
Subjt:  ELIKGKILVGHALSNDLKALLLSHPKKDVRDTSEYS-FYQK-EGCKRALRHLAADFLGVEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKSEMK--LKL

Query:  KQKKRKPRK
         +K + P+K
Subjt:  KQKKRKPRK

Q9GZR2 RNA exonuclease 47.7e-4248.26Show/hide
Query:  LTDVVAMDCEMVGV-DQGNKSALGRVTLVNKWGNVIYDEFVRPMERIVDFRTHVSGIRPSDLKKAKDFPTVQKRVAELIKGKILVGHALSNDLKALLLSH
        LT  +A+DCEMVGV  +G +S   RV++VN++G  +YD++V+P E + D+RT VSGIRP +LK+ ++   VQK VAE++KG+ILVGHAL NDLK L L H
Subjt:  LTDVVAMDCEMVGV-DQGNKSALGRVTLVNKWGNVIYDEFVRPMERIVDFRTHVSGIRPSDLKKAKDFPTVQKRVAELIKGKILVGHALSNDLKALLLSH

Query:  PKKDVRDTSEYSFY--QKEGCKRALRHLAADFLGVEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKSEMKL
        PKK +RDT +Y  +  Q +  + +LR L+   LG+++Q  EHC ++DA++AM LY   +KEWE   +    L
Subjt:  PKKDVRDTSEYSFY--QKEGCKRALRHLAADFLGVEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKSEMKL

Arabidopsis top hitse value%identityAlignment
AT2G48100.1 Exonuclease family protein2.8e-1834.15Show/hide
Query:  VAMDCEMVGVD-QGNKSALGRVTLVNKWGNVIYDEFVRPMERIVDFRTHVSGIRPSDLKKAKDFPTVQKRVAELIKG--------KILVGHALSNDLKAL
        +A+DCEMVG    G       V LV+   NVI+   V+P+  + D+R  ++G+   DLK       V++RV   + G         +LVGH L +D+  L
Subjt:  VAMDCEMVGVD-QGNKSALGRVTLVNKWGNVIYDEFVRPMERIVDFRTHVSGIRPSDLKKAKDFPTVQKRVAELIKG--------KILVGHALSNDLKAL

Query:  LLSHPKKDVRDTSEYSFYQKEG-CKRALRHLAADFLGVEIQNGEHCPVEDARSAMLLYQKKRKE
         L +P   +RDT++Y    K     ++L++L   +LG +IQ G+H   ED  SAM LY++ R +
Subjt:  LLSHPKKDVRDTSEYSFYQKEG-CKRALRHLAADFLGVEIQNGEHCPVEDARSAMLLYQKKRKE

AT2G48100.2 Exonuclease family protein2.8e-1834.15Show/hide
Query:  VAMDCEMVGVD-QGNKSALGRVTLVNKWGNVIYDEFVRPMERIVDFRTHVSGIRPSDLKKAKDFPTVQKRVAELIKG--------KILVGHALSNDLKAL
        +A+DCEMVG    G       V LV+   NVI+   V+P+  + D+R  ++G+   DLK       V++RV   + G         +LVGH L +D+  L
Subjt:  VAMDCEMVGVD-QGNKSALGRVTLVNKWGNVIYDEFVRPMERIVDFRTHVSGIRPSDLKKAKDFPTVQKRVAELIKG--------KILVGHALSNDLKAL

Query:  LLSHPKKDVRDTSEYSFYQKEG-CKRALRHLAADFLGVEIQNGEHCPVEDARSAMLLYQKKRKE
         L +P   +RDT++Y    K     ++L++L   +LG +IQ G+H   ED  SAM LY++ R +
Subjt:  LLSHPKKDVRDTSEYSFYQKEG-CKRALRHLAADFLGVEIQNGEHCPVEDARSAMLLYQKKRKE

AT3G15080.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein5.1e-8966.27Show/hide
Query:  EKKNPKPKQLNPNWALLQQKLK--PHGR-HASIHASSHNSVLGKRKQSPDVDSNHSLKKKLLIPANDDFSLTDVVAMDCEMVGVDQGNKSALGRVTLVNK
        +K  PKP QLNPNW+LLQQKLK   HG    S +  + +S+LGKRK+ PD + +   K   L P NDD SLTD VAMDCEMVGV QG KSALGRVTLVNK
Subjt:  EKKNPKPKQLNPNWALLQQKLK--PHGR-HASIHASSHNSVLGKRKQSPDVDSNHSLKKKLLIPANDDFSLTDVVAMDCEMVGVDQGNKSALGRVTLVNK

Query:  WGNVIYDEFVRPMERIVDFRTHVSGIRPSDLKKAKDFPTVQKRVAELIKGKILVGHALSNDLKALLLSHPKKDVRDTSEYSFYQKEGCKRALRHLAADFL
        WGNV+YDEFVRP+E +VDFRT +SGIRP DL+KAKDF   Q +VAELIKGKILVGHAL NDLKALLL+HPKKD+RDT EY  + K   +++L+HLA++ L
Subjt:  WGNVIYDEFVRPMERIVDFRTHVSGIRPSDLKKAKDFPTVQKRVAELIKGKILVGHALSNDLKALLLSHPKKDVRDTSEYSFYQKEGCKRALRHLAADFL

Query:  GVEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKSEMKLKLKQKKRKPRKKSKDG
        G +IQNGEHCP++DAR+AM+LYQK RKEWEK+VK + ++ LKQKKRKP+KK+K G
Subjt:  GVEIQNGEHCPVEDARSAMLLYQKKRKEWEKSVKSEMKLKLKQKKRKPRKKSKDG

AT3G27970.1 Exonuclease family protein3.2e-1931.61Show/hide
Query:  VVAMDCEMV-GVDQGNKSALGRVTLVNKWGNVIYDEFVRPMERIVDFRTHVSGIRPSDLKKAKDFPTVQKRVAELI--------------KGKILVGHAL
        VVA+ C+MV G   G+     RV + ++  NVI+  +V+P   +  +R   +GIRP +L+ A     VQ+++ E +              K +ILVGH L
Subjt:  VVAMDCEMV-GVDQGNKSALGRVTLVNKWGNVIYDEFVRPMERIVDFRTHVSGIRPSDLKKAKDFPTVQKRVAELI--------------KGKILVGHAL

Query:  SNDLKALLLSHPKKDVRDTSEYSFYQKEG-CKRALRHLAADFLGVEIQNGEHCPVEDARSAMLLYQKKRKEWEK
         +DL  L L +P   +RDT++Y    K      +L++L   +LG ++  G   P ED  + M LY + R +  K
Subjt:  SNDLKALLLSHPKKDVRDTSEYSFYQKEG-CKRALRHLAADFLGVEIQNGEHCPVEDARSAMLLYQKKRKEWEK

AT5G40310.1 Exonuclease family protein1.6e-1831.95Show/hide
Query:  VVAMDCEMV-GVDQGNKSALGRVTLVNKWGNVIYDEFVRPMERIVDFRTHVSGIRPSDLKKAKDFPTVQKRVAELI--------------KGKILVGHAL
        VVA+ C+MV G   G+     RV + ++  NV++  +V+P   + ++R  ++GIRP +L+ A      Q++V E +              K +ILVGH L
Subjt:  VVAMDCEMV-GVDQGNKSALGRVTLVNKWGNVIYDEFVRPMERIVDFRTHVSGIRPSDLKKAKDFPTVQKRVAELI--------------KGKILVGHAL

Query:  SNDLKALLLSHPKKDVRDTSEYSFYQKEG-CKRALRHLAADFLGVEIQNGEHCPVEDARSAMLLYQKKR
         N L +L L +    +RDT+EY    K      +L++L   +LG +I  G   P ED  + M LY + R
Subjt:  SNDLKALLLSHPKKDVRDTSEYSFYQKEG-CKRALRHLAADFLGVEIQNGEHCPVEDARSAMLLYQKKR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAGAAGAACCCTAAACCCAAACAGCTAAACCCCAATTGGGCGCTGCTCCAACAGAAGTTGAAGCCCCATGGCCGCCATGCTTCAATCCACGCCTCTTCCCACAA
TTCCGTTCTAGGAAAACGCAAGCAAAGCCCTGATGTGGACTCGAATCATTCCCTGAAGAAGAAACTTCTCATTCCTGCAAACGATGACTTTAGTCTGACAGATGTAGTCG
CTATGGATTGCGAAATGGTTGGCGTGGATCAAGGTAACAAAAGTGCCCTTGGACGAGTCACTCTGGTAAACAAATGGGGAAATGTTATATACGACGAGTTTGTGCGACCT
ATGGAGCGTATTGTTGACTTTCGGACTCACGTTAGTGGCATAAGACCCAGCGACCTCAAGAAGGCAAAGGATTTTCCAACAGTCCAGAAGAGAGTGGCAGAGTTGATTAA
AGGAAAGATTCTTGTTGGCCATGCCTTGTCTAATGATCTTAAGGCATTGCTCTTAAGTCATCCCAAGAAGGATGTAAGAGACACCTCCGAGTATTCATTCTACCAGAAGG
AAGGATGTAAAAGAGCTCTCCGCCATCTTGCAGCCGATTTTCTTGGTGTTGAGATCCAGAATGGGGAACACTGTCCGGTAGAAGATGCTCGTTCTGCAATGCTGCTCTAT
CAGAAGAAAAGAAAAGAGTGGGAAAAGAGTGTTAAATCTGAAATGAAGCTCAAATTGAAGCAGAAGAAACGCAAGCCAAGGAAGAAATCCAAGGATGGAGGTGGTTTTTA
A
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAGAAGAACCCTAAACCCAAACAGCTAAACCCCAATTGGGCGCTGCTCCAACAGAAGTTGAAGCCCCATGGCCGCCATGCTTCAATCCACGCCTCTTCCCACAA
TTCCGTTCTAGGAAAACGCAAGCAAAGCCCTGATGTGGACTCGAATCATTCCCTGAAGAAGAAACTTCTCATTCCTGCAAACGATGACTTTAGTCTGACAGATGTAGTCG
CTATGGATTGCGAAATGGTTGGCGTGGATCAAGGTAACAAAAGTGCCCTTGGACGAGTCACTCTGGTAAACAAATGGGGAAATGTTATATACGACGAGTTTGTGCGACCT
ATGGAGCGTATTGTTGACTTTCGGACTCACGTTAGTGGCATAAGACCCAGCGACCTCAAGAAGGCAAAGGATTTTCCAACAGTCCAGAAGAGAGTGGCAGAGTTGATTAA
AGGAAAGATTCTTGTTGGCCATGCCTTGTCTAATGATCTTAAGGCATTGCTCTTAAGTCATCCCAAGAAGGATGTAAGAGACACCTCCGAGTATTCATTCTACCAGAAGG
AAGGATGTAAAAGAGCTCTCCGCCATCTTGCAGCCGATTTTCTTGGTGTTGAGATCCAGAATGGGGAACACTGTCCGGTAGAAGATGCTCGTTCTGCAATGCTGCTCTAT
CAGAAGAAAAGAAAAGAGTGGGAAAAGAGTGTTAAATCTGAAATGAAGCTCAAATTGAAGCAGAAGAAACGCAAGCCAAGGAAGAAATCCAAGGATGGAGGTGGTTTTTA
A
Protein sequenceShow/hide protein sequence
MEKKNPKPKQLNPNWALLQQKLKPHGRHASIHASSHNSVLGKRKQSPDVDSNHSLKKKLLIPANDDFSLTDVVAMDCEMVGVDQGNKSALGRVTLVNKWGNVIYDEFVRP
MERIVDFRTHVSGIRPSDLKKAKDFPTVQKRVAELIKGKILVGHALSNDLKALLLSHPKKDVRDTSEYSFYQKEGCKRALRHLAADFLGVEIQNGEHCPVEDARSAMLLY
QKKRKEWEKSVKSEMKLKLKQKKRKPRKKSKDGGGF