; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0012150 (gene) of Chayote v1 genome

Gene IDSed0012150
OrganismSechium edule (Chayote v1)
DescriptionPoly polymerase 1, putative
Genome locationLG13:16246569..16247590
RNA-Seq ExpressionSed0012150
SyntenySed0012150
Gene Ontology termsNA
InterPro domainsIPR025322 - Protein of unknown function DUF4228, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008453039.1 PREDICTED: uncharacterized protein LOC103493864 [Cucumis melo]2.8e-5060.39Show/hide
Query:  MGSCLSN-------STPASPPPPPSTKVISFEGRLREYPVPISVSRVLQTEDSSASTSDSFLCNSDSLYYDEFIPALPLYDSLQPDHIYFILPSSRLDSR
        MG CLSN       S+   PPPPP+ KVIS +G LREYPVPISVSRVLQTE+SS+STSDSFLCNSD LY+D+FIP+LPL   L P+ IYFILPSS L  R
Subjt:  MGSCLSN-------STPASPPPPPSTKVISFEGRLREYPVPISVSRVLQTEDSSASTSDSFLCNSDSLYYDEFIPALPLYDSLQPDHIYFILPSSRLDSR

Query:  LTAADMAALAVKATRALFQTASNS-----FSRKKG--GRVSPILLTNDPYDDDHHHQ------LGNKKIAADHTSSSVKKLQRLTSRRAKLAVRSFKLRL
        LTA DMAALAVKAT AL   ++N+       R KG   R+SP+   + P D  H H+      + +       +SSSVKKLQRLTSRRAK+AVRSFKLRL
Subjt:  LTAADMAALAVKATRALFQTASNS-----FSRKKG--GRVSPILLTNDPYDDDHHHQ------LGNKKIAADHTSSSVKKLQRLTSRRAKLAVRSFKLRL

Query:  TTIYEGT
        +TIYEGT
Subjt:  TTIYEGT

XP_011654294.1 uncharacterized protein LOC101220453 [Cucumis sativus]7.4e-5160.98Show/hide
Query:  MGSCLSN-------STPASPPPPPSTKVISFEGRLREYPVPISVSRVLQTEDSSASTSDSFLCNSDSLYYDEFIPALPLYDSLQPDHIYFILPSSRLDSR
        MG C SN       S+   PPPPP+ KVIS +G LREYPVPISVSRVLQTE+SS+STSDSFLCNSD L+YD+FIP+LPL   L P+ IYFILPSS L  R
Subjt:  MGSCLSN-------STPASPPPPPSTKVISFEGRLREYPVPISVSRVLQTEDSSASTSDSFLCNSDSLYYDEFIPALPLYDSLQPDHIYFILPSSRLDSR

Query:  LTAADMAALAVKATRALFQTASNSF----SRKKGGRVSPILLTNDPYDD----DHHHQLG-NKKIAADHTSSSVKKLQRLTSRRAKLAVRSFKLRLTTIY
        LTA DMAALAVKAT AL   ++N+     ++ +  R+SP+   + P D     +H H L  N     + TSSSVKKLQRLTSRRAK+AVRSFKLRL+TIY
Subjt:  LTAADMAALAVKATRALFQTASNSF----SRKKGGRVSPILLTNDPYDD----DHHHQLG-NKKIAADHTSSSVKKLQRLTSRRAKLAVRSFKLRLTTIY

Query:  EGTVM
        EGTV+
Subjt:  EGTVM

XP_022154429.1 uncharacterized protein LOC111021675 [Momordica charantia]2.9e-4758.74Show/hide
Query:  MGSCLSNSTPASPPPPPST---KVISFEGRLREYPVPISVSRVLQTEDSSASTSDSFLCNSDSLYYDEFIPALPLYDSLQPDHIYFILPSSRLDSRLTAA
        MG+CLS S PAS PPPP+T   KVIS EG LREYP PISVSRVLQTE+ S+STSDSFLCNSDSLYYD+FIP +PL D L    IYF+LPSS+L  RL+A+
Subjt:  MGSCLSNSTPASPPPPPST---KVISFEGRLREYPVPISVSRVLQTEDSSASTSDSFLCNSDSLYYDEFIPALPLYDSLQPDHIYFILPSSRLDSRLTAA

Query:  DMAALAVKATRALFQTASNSFSRKKGGRVSPILLTNDPYDDDHHHQLGNKKIAADH--------------TSSSVKKLQRLTSRRAKLAVRSFKLRLTTI
        DMAA+A+KA+ AL   +S     +K GR+SP+L+ N P  D H     N   +                  SSSV+KLQ+LTSRRAK+AVRSFKL+L+TI
Subjt:  DMAALAVKATRALFQTASNSFSRKKGGRVSPILLTNDPYDDDHHHQLGNKKIAADH--------------TSSSVKKLQRLTSRRAKLAVRSFKLRLTTI

Query:  YEGTVM
        YEGTV+
Subjt:  YEGTVM

XP_022981858.1 uncharacterized protein LOC111480876 [Cucurbita maxima]2.9e-4761.66Show/hide
Query:  MGSCLSNSTPAS-PPPPPSTKVISFEGRLREYPVPISVSRVLQTEDSSASTSDSFLCNSDSLYYDEFIPALPLYDSLQPDHIYFILPSSRLDSRLTAADM
        +  CL++  P+S  PPPP+ KVIS +G LREYPVPISVSRVLQTE+SS+S SDSFLCNSD LYYD+FIP LPL + L P+ IYF+LPSS L  RL+A+ M
Subjt:  MGSCLSNSTPAS-PPPPPSTKVISFEGRLREYPVPISVSRVLQTEDSSASTSDSFLCNSDSLYYDEFIPALPLYDSLQPDHIYFILPSSRLDSRLTAADM

Query:  AALAVKATRALFQTASNSFSRKKGGRVSPILLTNDPYDDDH--HHQLGNKKIAADHTSS-SVKKLQRLTSRRAKLAVRSFKLRLTTIYEGTVM
        AALAVKA+ AL   + N   R+K GRVSP+L  +   D DH    +   K  AAD ++S SV+KLQRLTSRRAK+AVRSFKL+L+TIYEG V+
Subjt:  AALAVKATRALFQTASNSFSRKKGGRVSPILLTNDPYDDDH--HHQLGNKKIAADHTSS-SVKKLQRLTSRRAKLAVRSFKLRLTTIYEGTVM

XP_038896630.1 uncharacterized protein LOC120084892 [Benincasa hispida]7.9e-5363.05Show/hide
Query:  MGSCLSN-----STPASPPPPPSTKVISFEGRLREYPVPISVSRVLQTEDSSASTSDSFLCNSDSLYYDEFIPALPLYDSLQPDHIYFILPSSRLDSRLT
        MG+CLSN        + PPPPP+ KVI+ +G LREYPVPISVSRVLQTEDSS+STSDSFLCNSD LYYD+FIP LPL   LQP+ IYF+L SS+L  RLT
Subjt:  MGSCLSN-----STPASPPPPPSTKVISFEGRLREYPVPISVSRVLQTEDSSASTSDSFLCNSDSLYYDEFIPALPLYDSLQPDHIYFILPSSRLDSRLT

Query:  AADMAALAVKATRALFQTASNSFS-RKKGGRVSPILLTNDPYDDD------HHHQLGNKKIAADHT--SSSVKKLQRLTSRRAKLAVRSFKLRLTTIYEG
        A+DMAALAVKAT AL   ++N    R+  GR+SPILL++  Y DD      H   + +KK +A  T  SSSV++LQRLTSRRAK+AVRSFKLRL+TIYEG
Subjt:  AADMAALAVKATRALFQTASNSFS-RKKGGRVSPILLTNDPYDDD------HHHQLGNKKIAADHT--SSSVKKLQRLTSRRAKLAVRSFKLRLTTIYEG

Query:  TVM
         V+
Subjt:  TVM

TrEMBL top hitse value%identityAlignment
A0A0A0L5Z9 Uncharacterized protein3.6e-5160.98Show/hide
Query:  MGSCLSN-------STPASPPPPPSTKVISFEGRLREYPVPISVSRVLQTEDSSASTSDSFLCNSDSLYYDEFIPALPLYDSLQPDHIYFILPSSRLDSR
        MG C SN       S+   PPPPP+ KVIS +G LREYPVPISVSRVLQTE+SS+STSDSFLCNSD L+YD+FIP+LPL   L P+ IYFILPSS L  R
Subjt:  MGSCLSN-------STPASPPPPPSTKVISFEGRLREYPVPISVSRVLQTEDSSASTSDSFLCNSDSLYYDEFIPALPLYDSLQPDHIYFILPSSRLDSR

Query:  LTAADMAALAVKATRALFQTASNSF----SRKKGGRVSPILLTNDPYDD----DHHHQLG-NKKIAADHTSSSVKKLQRLTSRRAKLAVRSFKLRLTTIY
        LTA DMAALAVKAT AL   ++N+     ++ +  R+SP+   + P D     +H H L  N     + TSSSVKKLQRLTSRRAK+AVRSFKLRL+TIY
Subjt:  LTAADMAALAVKATRALFQTASNSF----SRKKGGRVSPILLTNDPYDD----DHHHQLG-NKKIAADHTSSSVKKLQRLTSRRAKLAVRSFKLRLTTIY

Query:  EGTVM
        EGTV+
Subjt:  EGTVM

A0A1S3BUP5 uncharacterized protein LOC1034938641.4e-5060.39Show/hide
Query:  MGSCLSN-------STPASPPPPPSTKVISFEGRLREYPVPISVSRVLQTEDSSASTSDSFLCNSDSLYYDEFIPALPLYDSLQPDHIYFILPSSRLDSR
        MG CLSN       S+   PPPPP+ KVIS +G LREYPVPISVSRVLQTE+SS+STSDSFLCNSD LY+D+FIP+LPL   L P+ IYFILPSS L  R
Subjt:  MGSCLSN-------STPASPPPPPSTKVISFEGRLREYPVPISVSRVLQTEDSSASTSDSFLCNSDSLYYDEFIPALPLYDSLQPDHIYFILPSSRLDSR

Query:  LTAADMAALAVKATRALFQTASNS-----FSRKKG--GRVSPILLTNDPYDDDHHHQ------LGNKKIAADHTSSSVKKLQRLTSRRAKLAVRSFKLRL
        LTA DMAALAVKAT AL   ++N+       R KG   R+SP+   + P D  H H+      + +       +SSSVKKLQRLTSRRAK+AVRSFKLRL
Subjt:  LTAADMAALAVKATRALFQTASNS-----FSRKKG--GRVSPILLTNDPYDDDHHHQ------LGNKKIAADHTSSSVKKLQRLTSRRAKLAVRSFKLRL

Query:  TTIYEGT
        +TIYEGT
Subjt:  TTIYEGT

A0A6J1DM27 uncharacterized protein LOC1110216751.4e-4758.74Show/hide
Query:  MGSCLSNSTPASPPPPPST---KVISFEGRLREYPVPISVSRVLQTEDSSASTSDSFLCNSDSLYYDEFIPALPLYDSLQPDHIYFILPSSRLDSRLTAA
        MG+CLS S PAS PPPP+T   KVIS EG LREYP PISVSRVLQTE+ S+STSDSFLCNSDSLYYD+FIP +PL D L    IYF+LPSS+L  RL+A+
Subjt:  MGSCLSNSTPASPPPPPST---KVISFEGRLREYPVPISVSRVLQTEDSSASTSDSFLCNSDSLYYDEFIPALPLYDSLQPDHIYFILPSSRLDSRLTAA

Query:  DMAALAVKATRALFQTASNSFSRKKGGRVSPILLTNDPYDDDHHHQLGNKKIAADH--------------TSSSVKKLQRLTSRRAKLAVRSFKLRLTTI
        DMAA+A+KA+ AL   +S     +K GR+SP+L+ N P  D H     N   +                  SSSV+KLQ+LTSRRAK+AVRSFKL+L+TI
Subjt:  DMAALAVKATRALFQTASNSFSRKKGGRVSPILLTNDPYDDDHHHQLGNKKIAADH--------------TSSSVKKLQRLTSRRAKLAVRSFKLRLTTI

Query:  YEGTVM
        YEGTV+
Subjt:  YEGTVM

A0A6J1FIQ7 uncharacterized protein LOC1114461013.1e-4761.14Show/hide
Query:  MGSCLSNSTPAS-PPPPPSTKVISFEGRLREYPVPISVSRVLQTEDSSASTSDSFLCNSDSLYYDEFIPALPLYDSLQPDHIYFILPSSRLDSRLTAADM
        +  CL++  P+S  PPPP+ KVIS +G LREYPVPISVSRVLQTE+SS+S SDSFLCNSD LYYD+FIP LPL + L P+ IYF+LPSS L  RL+A+ M
Subjt:  MGSCLSNSTPAS-PPPPPSTKVISFEGRLREYPVPISVSRVLQTEDSSASTSDSFLCNSDSLYYDEFIPALPLYDSLQPDHIYFILPSSRLDSRLTAADM

Query:  AALAVKATRALFQTASNSFSRKKGGRVSPILLTNDPYDDDH--HHQLGNKKIAADHTSS-SVKKLQRLTSRRAKLAVRSFKLRLTTIYEGTVM
        AALAVKA+ AL   + N   R+K GRVSP+L  +   D DH    +   K  AAD ++S SV+KLQRLTS+RAK+AVRSFKL+L+TIYEG V+
Subjt:  AALAVKATRALFQTASNSFSRKKGGRVSPILLTNDPYDDDH--HHQLGNKKIAADHTSS-SVKKLQRLTSRRAKLAVRSFKLRLTTIYEGTVM

A0A6J1J381 uncharacterized protein LOC1114808761.4e-4761.66Show/hide
Query:  MGSCLSNSTPAS-PPPPPSTKVISFEGRLREYPVPISVSRVLQTEDSSASTSDSFLCNSDSLYYDEFIPALPLYDSLQPDHIYFILPSSRLDSRLTAADM
        +  CL++  P+S  PPPP+ KVIS +G LREYPVPISVSRVLQTE+SS+S SDSFLCNSD LYYD+FIP LPL + L P+ IYF+LPSS L  RL+A+ M
Subjt:  MGSCLSNSTPAS-PPPPPSTKVISFEGRLREYPVPISVSRVLQTEDSSASTSDSFLCNSDSLYYDEFIPALPLYDSLQPDHIYFILPSSRLDSRLTAADM

Query:  AALAVKATRALFQTASNSFSRKKGGRVSPILLTNDPYDDDH--HHQLGNKKIAADHTSS-SVKKLQRLTSRRAKLAVRSFKLRLTTIYEGTVM
        AALAVKA+ AL   + N   R+K GRVSP+L  +   D DH    +   K  AAD ++S SV+KLQRLTSRRAK+AVRSFKL+L+TIYEG V+
Subjt:  AALAVKATRALFQTASNSFSRKKGGRVSPILLTNDPYDDDH--HHQLGNKKIAADHTSS-SVKKLQRLTSRRAKLAVRSFKLRLTTIYEGTVM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G21010.1 unknown protein4.3e-3344.08Show/hide
Query:  MGSCLSNSTPASPPPPPSTKVISFEGRLREYPVPISVSRVLQTEDSSASTSDS-------FLCNSDSLYYDEFIPALPLYDSLQPDHIYFILPSSRLDSR
        MG C+S     S    P+ K+++  G LREY VP+  S+VL+ E ++A +S S       F+C+SDSLYYD+FIPA+   + LQ D IYF+LP S+  SR
Subjt:  MGSCLSNSTPASPPPPPSTKVISFEGRLREYPVPISVSRVLQTEDSSASTSDS-------FLCNSDSLYYDEFIPALPLYDSLQPDHIYFILPSSRLDSR

Query:  LTAADMAALAVKATRALFQTASNSFSRKKGGRVSPILL---TNDPYDDDHHHQLGNK------KIAADHTSS------SVKKLQRLTSRRAKLAVRSFKL
        LTA+DMAALAVKA+ A+  +      R+K  R+SP+++   +ND  + +       K      K A    SS      SV+ L+R TS+RAKLAVRSF+L
Subjt:  LTAADMAALAVKATRALFQTASNSFSRKKGGRVSPILL---TNDPYDDDHHHQLGNK------KIAADHTSS------SVKKLQRLTSRRAKLAVRSFKL

Query:  RLTTIYEGTVM
        +L+TIYEG+V+
Subjt:  RLTTIYEGTVM

AT1G76600.1 unknown protein2.3e-3442.79Show/hide
Query:  MGSCLSNSTPASPPPPPSTKVISFEGRLREYPVPISVSRVLQTEDSSASTSDS----FLCNSDSLYYDEFIPALPLYDSLQPDHIYFILPSSRLDSRLTA
        MG C+S +         + K+++  G LREY VP+  S+VL++E +S+S+S S    FLCNSDSLYYD+FIPA+   + LQ + IYF+LP S+   RL+A
Subjt:  MGSCLSNSTPASPPPPPSTKVISFEGRLREYPVPISVSRVLQTEDSSASTSDS----FLCNSDSLYYDEFIPALPLYDSLQPDHIYFILPSSRLDSRLTA

Query:  ADMAALAVKATRALFQTASNSFSRKKGGRVSPILLTNDPYDDDHHHQLGNKKIAADHT------------------------SSSVKKLQRLTSRRAKLA
        +DMAALAVKA+ A+ + A     R++ GR+SP++  N    +D+     N +I  + T                        S SV+KL+R TS RAKLA
Subjt:  ADMAALAVKATRALFQTASNSFSRKKGGRVSPILLTNDPYDDDHHHQLGNKKIAADHT------------------------SSSVKKLQRLTSRRAKLA

Query:  VRSFKLRLTTIYEGT
        VRSF+LRL+TIYEG+
Subjt:  VRSFKLRLTTIYEGT

AT2G23690.1 unknown protein6.7e-1034.56Show/hide
Query:  MGSCLS-NSTPASPPPPPSTKVISFEGRLREYPVPISVSRVLQTEDSSASTSDSFLCNSDSLYYDEFIPALPLYDSLQPDHIYFILPSSRLDSRLTAADM
        MG C S  ST  +     + K+I  +GR+ E+  P+ V  VLQ           F+CNSD + +D  + A+   +  Q   +YF LP S L   L A +M
Subjt:  MGSCLS-NSTPASPPPPPSTKVISFEGRLREYPVPISVSRVLQTEDSSASTSDSFLCNSDSLYYDEFIPALPLYDSLQPDHIYFILPSSRLDSRLTAADM

Query:  AALAVKATRALFQTASNSFSRKKGGR---VSPILLT
        AALAVKA+ AL ++  +    K   R   VSP++ +
Subjt:  AALAVKATRALFQTASNSFSRKKGGR---VSPILLT

AT3G50800.1 unknown protein9.4e-1235.29Show/hide
Query:  MGSCLSNSTPASPPPPPSTKVISFEGRLREYPVPISVSRVLQTEDSSASTSDSFLCNSDSLYYDEFIPALPLYDSLQPDHIYFILPSSRLDSRLTAADMA
        MG+C S  +  +     + K+I  +G L+E+  P+ V ++LQ   +      SF+CNSD + +D+ + A+P  + L+P  +YF+LP + L+  L A +MA
Subjt:  MGSCLSNSTPASPPPPPSTKVISFEGRLREYPVPISVSRVLQTEDSSASTSDSFLCNSDSLYYDEFIPALPLYDSLQPDHIYFILPSSRLDSRLTAADMA

Query:  ALAVKATRALFQTASNSFS
        ALAVKA+ AL ++     S
Subjt:  ALAVKATRALFQTASNSFS

AT5G66580.1 unknown protein1.0e-1037.27Show/hide
Query:  MGSCLSNSTPASPPPPPSTKVISFEGRLREYPVPISVSRVLQTEDSSASTSDSFLCNSDSLYYDEFIPALPLYDSLQPDHIYFILPSSRLDSRLTAADMA
        MG+C S  +  S     S K+I  +G L+E+  P+ V ++LQ   +      SF+CNSD + +D+ + A+   + L+   +YF+LP + L+  L A +MA
Subjt:  MGSCLSNSTPASPPPPPSTKVISFEGRLREYPVPISVSRVLQTEDSSASTSDSFLCNSDSLYYDEFIPALPLYDSLQPDHIYFILPSSRLDSRLTAADMA

Query:  ALAVKATRAL
        ALAVKA+ AL
Subjt:  ALAVKATRAL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTTATTTATATGTGCATTTAATGATGGCATGCCCCATTGTATACTGACAGCACCTTCTCCTCCTTCAATTGTGATGGGCTCTTGTTTGTCTAATTCAACGCCCGC
CTCTCCTCCGCCGCCCCCGAGCACCAAGGTGATCTCCTTCGAAGGCCGTCTCCGGGAATACCCCGTTCCCATCTCCGTCTCACGCGTCCTCCAGACAGAAGATTCGTCAG
CTTCCACCTCAGATTCATTTCTCTGCAATTCCGACAGCCTCTACTACGATGAATTCATTCCCGCCCTCCCTCTCTACGATTCGCTTCAACCCGATCACATCTATTTCATC
CTTCCTTCTTCTAGACTTGATAGCCGCTTGACCGCAGCCGACATGGCCGCCTTGGCCGTCAAAGCCACCCGAGCCCTATTCCAAACCGCTTCTAATTCTTTTTCCCGAAA
GAAGGGTGGTCGTGTTTCTCCTATCCTCCTTACCAATGATCCCTACGATGATGATCATCATCATCAATTGGGCAACAAGAAGATTGCTGCAGATCACACCTCCTCCTCTG
TTAAGAAATTGCAGAGATTAACGTCCAGAAGAGCAAAACTGGCGGTTCGTTCCTTTAAACTCAGATTGACCACCATATATGAAGGCACGGTTATGTAA
mRNA sequenceShow/hide mRNA sequence
TTTGTTCTCTAATAAAAAAGAAAGAAAGAGTAAAGGCAGGCGCGTTGAAAGTTAAGAGGTGGGTTTTATGACGCAACTCCCATTCTCTTTCCTCCTCATCACTGACCTCA
CATGATTATCAGATTTGAATTCCAGCCATACATATGAATTTATTTATATGTGCATTTAATGATGGCATGCCCCATTGTATACTGACAGCACCTTCTCCTCCTTCAATTGT
GATGGGCTCTTGTTTGTCTAATTCAACGCCCGCCTCTCCTCCGCCGCCCCCGAGCACCAAGGTGATCTCCTTCGAAGGCCGTCTCCGGGAATACCCCGTTCCCATCTCCG
TCTCACGCGTCCTCCAGACAGAAGATTCGTCAGCTTCCACCTCAGATTCATTTCTCTGCAATTCCGACAGCCTCTACTACGATGAATTCATTCCCGCCCTCCCTCTCTAC
GATTCGCTTCAACCCGATCACATCTATTTCATCCTTCCTTCTTCTAGACTTGATAGCCGCTTGACCGCAGCCGACATGGCCGCCTTGGCCGTCAAAGCCACCCGAGCCCT
ATTCCAAACCGCTTCTAATTCTTTTTCCCGAAAGAAGGGTGGTCGTGTTTCTCCTATCCTCCTTACCAATGATCCCTACGATGATGATCATCATCATCAATTGGGCAACA
AGAAGATTGCTGCAGATCACACCTCCTCCTCTGTTAAGAAATTGCAGAGATTAACGTCCAGAAGAGCAAAACTGGCGGTTCGTTCCTTTAAACTCAGATTGACCACCATA
TATGAAGGCACGGTTATGTAATTATTTAATTAATGTGTTTTTTATTTTTCTTTCTCCTCTCTGCAACTAAACAAACAACAACTAGAGTTGTTGGATTATATGCGTTTCAT
TTTTTCAATGAACTACACACGTGTTCATCAATTATATATGCAGTACTAACTCCCAATTATCCTCTTTCAAATCTTCATCATTTCCATAACAGAACTGATTCGACATGAAA
CCAACTATATATATTCAATGTGTTGAATGGTG
Protein sequenceShow/hide protein sequence
MNLFICAFNDGMPHCILTAPSPPSIVMGSCLSNSTPASPPPPPSTKVISFEGRLREYPVPISVSRVLQTEDSSASTSDSFLCNSDSLYYDEFIPALPLYDSLQPDHIYFI
LPSSRLDSRLTAADMAALAVKATRALFQTASNSFSRKKGGRVSPILLTNDPYDDDHHHQLGNKKIAADHTSSSVKKLQRLTSRRAKLAVRSFKLRLTTIYEGTVM