; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0012152 (gene) of Chayote v1 genome

Gene IDSed0012152
OrganismSechium edule (Chayote v1)
DescriptionATP-dependent helicase/nuclease subunit A isoform 1
Genome locationLG08:2069207..2070011
RNA-Seq ExpressionSed0012152
SyntenySed0012152
Gene Ontology termsGO:0006508 - proteolysis (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0004386 - helicase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7021603.1 hypothetical protein SDJN02_15329 [Cucurbita argyrosperma subsp. argyrosperma]9.8e-2084.13Show/hide
Query:  MIGNSRTWAYVRIITGTVAGGVLGFYVMHRVELSYKEKVNERLKQYEIELKKKEQMKELEDSL
        MIGNSR WAY+RIITGT+ GGVLGFYVMHRVELSYKEK+ ERLKQYE ELKKKEQ+KE+EDS+
Subjt:  MIGNSRTWAYVRIITGTVAGGVLGFYVMHRVELSYKEKVNERLKQYEIELKKKEQMKELEDSL
KGN63809.2 hypothetical protein Csa_013239 [Cucumis sativus]1.7e-1984.13Show/hide
Query:  MIGNSRTWAYVRIITGTVAGGVLGFYVMHRVELSYKEKVNERLKQYEIELKKKEQMKELEDSL
        M+G+SR WAY+RIITGTV GGVLGFYVMHRVE+ YKEK+ ERLKQYE ELKKKEQMKELEDSL
Subjt:  MIGNSRTWAYVRIITGTVAGGVLGFYVMHRVELSYKEKVNERLKQYEIELKKKEQMKELEDSL
XP_004138234.1 uncharacterized protein LOC101217575 [Cucumis sativus]1.7e-1984.13Show/hide
Query:  MIGNSRTWAYVRIITGTVAGGVLGFYVMHRVELSYKEKVNERLKQYEIELKKKEQMKELEDSL
        M+G+SR WAY+RIITGTV GGVLGFYVMHRVE+ YKEK+ ERLKQYE ELKKKEQMKELEDSL
Subjt:  MIGNSRTWAYVRIITGTVAGGVLGFYVMHRVELSYKEKVNERLKQYEIELKKKEQMKELEDSL
XP_022134690.1 uncharacterized protein LOC111006898 [Momordica charantia]2.2e-1984.13Show/hide
Query:  MIGNSRTWAYVRIITGTVAGGVLGFYVMHRVELSYKEKVNERLKQYEIELKKKEQMKELEDSL
        M+GN R WAYVRIITGT+ GGVLGFYVMHRVE+ YKEKV ERL+QYE ELKKKEQMKELEDSL
Subjt:  MIGNSRTWAYVRIITGTVAGGVLGFYVMHRVELSYKEKVNERLKQYEIELKKKEQMKELEDSL
XP_022987318.1 uncharacterized protein LOC111484905 [Cucurbita maxima]4.9e-1982.26Show/hide
Query:  MIGNSRTWAYVRIITGTVAGGVLGFYVMHRVELSYKEKVNERLKQYEIELKKKEQMKELEDS
        M+G+SRTWAY+RII GT+ GGVLGFYVMHRVE+ YKEK+ ERL+QYEIELKKKEQMKELEDS
Subjt:  MIGNSRTWAYVRIITGTVAGGVLGFYVMHRVELSYKEKVNERLKQYEIELKKKEQMKELEDS
TrEMBL top hitse value%identityAlignment
A0A1S3BW37 uncharacterized protein LOC1034941132.6e-1879.37Show/hide
Query:  MIGNSRTWAYVRIITGTVAGGVLGFYVMHRVELSYKEKVNERLKQYEIELKKKEQMKELEDSL
        M+G+SR WAY RII GT+ GGVLGFYVMHRVE+ YKEK+ ERLKQYE ELKKKE+MKELEDSL
Subjt:  MIGNSRTWAYVRIITGTVAGGVLGFYVMHRVELSYKEKVNERLKQYEIELKKKEQMKELEDSL
A0A5A7USD3 ATP-dependent helicase/nuclease subunit A isoform 12.6e-1879.37Show/hide
Query:  MIGNSRTWAYVRIITGTVAGGVLGFYVMHRVELSYKEKVNERLKQYEIELKKKEQMKELEDSL
        M+G+SR WAY RII GT+ GGVLGFYVMHRVE+ YKEK+ ERLKQYE ELKKKE+MKELEDSL
Subjt:  MIGNSRTWAYVRIITGTVAGGVLGFYVMHRVELSYKEKVNERLKQYEIELKKKEQMKELEDSL
A0A6J1BYI4 uncharacterized protein LOC1110068981.1e-1984.13Show/hide
Query:  MIGNSRTWAYVRIITGTVAGGVLGFYVMHRVELSYKEKVNERLKQYEIELKKKEQMKELEDSL
        M+GN R WAYVRIITGT+ GGVLGFYVMHRVE+ YKEKV ERL+QYE ELKKKEQMKELEDSL
Subjt:  MIGNSRTWAYVRIITGTVAGGVLGFYVMHRVELSYKEKVNERLKQYEIELKKKEQMKELEDSL
A0A6J1E2A1 uncharacterized protein LOC1114301286.9e-1980.65Show/hide
Query:  MIGNSRTWAYVRIITGTVAGGVLGFYVMHRVELSYKEKVNERLKQYEIELKKKEQMKELEDS
        M+G+SR+WAY+RII GT+ GGVLGFYVMHRVE+ YKEK+ ERL+QYEIELKKKEQMKELEDS
Subjt:  MIGNSRTWAYVRIITGTVAGGVLGFYVMHRVELSYKEKVNERLKQYEIELKKKEQMKELEDS
A0A6J1JJ44 uncharacterized protein LOC1114849052.4e-1982.26Show/hide
Query:  MIGNSRTWAYVRIITGTVAGGVLGFYVMHRVELSYKEKVNERLKQYEIELKKKEQMKELEDS
        M+G+SRTWAY+RII GT+ GGVLGFYVMHRVE+ YKEK+ ERL+QYEIELKKKEQMKELEDS
Subjt:  MIGNSRTWAYVRIITGTVAGGVLGFYVMHRVELSYKEKVNERLKQYEIELKKKEQMKELEDS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G18510.1 unknown protein1.4e-1153.57Show/hide
Query:  NSRTWAYVRIITGTVAGGVLGFYVMHRVELSYKEKVNERLKQYEIELKKKEQMKEL
        +S TW Y RII GT+ GG LGFYVMHR+E+SYK ++ E L QYE +++K+++ + L
Subjt:  NSRTWAYVRIITGTVAGGVLGFYVMHRVELSYKEKVNERLKQYEIELKKKEQMKEL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCGGAAACTCTCGTACATGGGCTTACGTTCGGATCATCACCGGCACCGTCGCCGGCGGCGTTCTCGGCTTCTACGTAATGCACCGCGTCGAACTCAGCTATAAGGA
GAAGGTGAACGAGAGGTTAAAACAGTACGAAATCGAACTGAAGAAGAAGGAGCAAATGAAGGAACTCGAAGATTCTCTATAG
mRNA sequenceShow/hide mRNA sequence
AAACTGGTAAATTTGTACAGAAAAATTGAGAAGGAAAAGGAGCTGAGAGATCGGGAAAATGATCGGAAACTCTCGTACATGGGCTTACGTTCGGATCATCACCGGCACCG
TCGCCGGCGGCGTTCTCGGCTTCTACGTAATGCACCGCGTCGAACTCAGCTATAAGGAGAAGGTGAACGAGAGGTTAAAACAGTACGAAATCGAACTGAAGAAGAAGGAG
CAAATGAAGGAACTCGAAGATTCTCTATAGTTGTGAGTGCCCTAAAATTTTCACTTCAATTATAAATTGTTGGCTGAAACACTCAATTGAAGCGTTCCAAAAAGCAGATG
AATTAGGGCACTAGAGTTTAGAACTGGATTTGGCAATAAAGTAGCGTAGGCTTAAAAAAGAGAGAAGAGAATTGGGTTGCTGTTTTGGTTTCTCATTTCTAAATTTTGAT
TCTCTGCTTGTGTTTTTGTTGTGTGATTGAATTTGATTCATGATTGGTTTCTTTAGACTCCCAATGTAAACTTAAGTTGATCAATTCAAGCCCTTTTAAGTGCTGGGTTC
TGTCTTTTGTGCTTATACATGATTTTGTGCATTGACTTGAACTCCAATAGTGGAAGGAAATCCACTAGGTAGGCAATGGAATGATTAGATTCATTTGGTTTTAGTTATAG
AAATTGGGTTGAGGTGGACTTACAAG
Protein sequenceShow/hide protein sequence
MIGNSRTWAYVRIITGTVAGGVLGFYVMHRVELSYKEKVNERLKQYEIELKKKEQMKELEDSL