; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0012161 (gene) of Chayote v1 genome

Gene IDSed0012161
OrganismSechium edule (Chayote v1)
DescriptionHomologous-pairing protein 2 homolog
Genome locationLG06:43123573..43125539
RNA-Seq ExpressionSed0012161
SyntenySed0012161
Gene Ontology termsGO:0000709 - meiotic joint molecule formation (biological process)
GO:0007129 - synapsis (biological process)
GO:0010774 - meiotic strand invasion involved in reciprocal meiotic recombination (biological process)
GO:0050790 - regulation of catalytic activity (biological process)
GO:0000794 - condensed nuclear chromosome (cellular component)
GO:0120231 - DNA recombinase auxiliary factor complex (cellular component)
GO:0003690 - double-stranded DNA binding (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
GO:0120230 - recombinase activator activity (molecular function)
InterPro domainsIPR010776 - Homologous-pairing protein 2, winged helix domain
IPR036388 - Winged helix-like DNA-binding domain superfamily
IPR036390 - Winged helix DNA-binding domain superfamily
IPR040461 - Homologous-pairing protein 2
IPR040661 - Leucine zipper with capping helix domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034541.1 homologous-pairing protein 2-like protein isoform X1 [Cucumis melo var. makuwa]1.8e-10389.82Show/hide
Query:  MAPKSDSAEAIVLNFVNEQNRPLNSQNAADCLQKFNLKKTAVQKALDALADSGKISFKEYGKQKIYIARQDQFKIPNSEELAQMKEANAKLQEVLVEQKK
        MAPKSDSAEAIVLNFVNEQNRPLNSQNAAD LQKFNLKKTAVQKALD+LAD+G+ISFKEYGKQKIYIARQDQF+IPNSEEL QMKEANAKLQ+ L E KK
Subjt:  MAPKSDSAEAIVLNFVNEQNRPLNSQNAADCLQKFNLKKTAVQKALDALADSGKISFKEYGKQKIYIARQDQFKIPNSEELAQMKEANAKLQEVLVEQKK

Query:  AIGKVEEEIRTLQSNLTLEQMREKEARLRKEVKELEDKLEILRGGVTLVSPEDRKAIEHAYAEKLSQWRKRKRMFKDIWDAITENSPKDIKEFKEELGIE
        AI +VEEEIRTLQSNLTLEQMREKE  LRKEVKELEDKLE+LR GVTLVSPEDRKAIE  Y+EKLSQWRKRKRMFKDIWDAITENSPKD+KEFKEELGIE
Subjt:  AIGKVEEEIRTLQSNLTLEQMREKEARLRKEVKELEDKLEILRGGVTLVSPEDRKAIEHAYAEKLSQWRKRKRMFKDIWDAITENSPKDIKEFKEELGIE

Query:  YDEDVGVSFQSYSDMLPQNRKRPRGK
        YDEDVGV+ QS+SDMLPQNRKRPRGK
Subjt:  YDEDVGVSFQSYSDMLPQNRKRPRGK

XP_008446584.1 PREDICTED: homologous-pairing protein 2 homolog isoform X1 [Cucumis melo]1.8e-10389.82Show/hide
Query:  MAPKSDSAEAIVLNFVNEQNRPLNSQNAADCLQKFNLKKTAVQKALDALADSGKISFKEYGKQKIYIARQDQFKIPNSEELAQMKEANAKLQEVLVEQKK
        MAPKSDSAEAIVLNFVNEQNRPLNSQNAAD LQKFNLKKTAVQKALD+LAD+G+ISFKEYGKQKIYIARQDQF+IPNSEEL QMKEANAKLQ+ L E KK
Subjt:  MAPKSDSAEAIVLNFVNEQNRPLNSQNAADCLQKFNLKKTAVQKALDALADSGKISFKEYGKQKIYIARQDQFKIPNSEELAQMKEANAKLQEVLVEQKK

Query:  AIGKVEEEIRTLQSNLTLEQMREKEARLRKEVKELEDKLEILRGGVTLVSPEDRKAIEHAYAEKLSQWRKRKRMFKDIWDAITENSPKDIKEFKEELGIE
        AI +VEEEIRTLQSNLTLEQMREKE  LRKEVKELEDKLE+LR GVTLVSPEDRKAIE  Y+EKLSQWRKRKRMFKDIWDAITENSPKD+KEFKEELGIE
Subjt:  AIGKVEEEIRTLQSNLTLEQMREKEARLRKEVKELEDKLEILRGGVTLVSPEDRKAIEHAYAEKLSQWRKRKRMFKDIWDAITENSPKDIKEFKEELGIE

Query:  YDEDVGVSFQSYSDMLPQNRKRPRGK
        YDEDVGV+ QS+SDMLPQNRKRPRGK
Subjt:  YDEDVGVSFQSYSDMLPQNRKRPRGK

XP_008446588.1 PREDICTED: homologous-pairing protein 2 homolog isoform X2 [Cucumis melo]5.1e-10389.78Show/hide
Query:  MAPKSDSAEAIVLNFVNEQNRPLNSQNAADCLQKFNLKKTAVQKALDALADSGKISFKEYGKQKIYIARQDQFKIPNSEELAQMKEANAKLQEVLVEQKK
        MAPKSDSAEAIVLNFVNEQNRPLNSQNAAD LQKFNLKKTAVQKALD+LAD+G+ISFKEYGKQKIYIARQDQF+IPNSEEL QMKEANAKLQ+ L E KK
Subjt:  MAPKSDSAEAIVLNFVNEQNRPLNSQNAADCLQKFNLKKTAVQKALDALADSGKISFKEYGKQKIYIARQDQFKIPNSEELAQMKEANAKLQEVLVEQKK

Query:  AIGKVEEEIRTLQSNLTLEQMREKEARLRKEVKELEDKLEILRGGVTLVSPEDRKAIEHAYAEKLSQWRKRKRMFKDIWDAITENSPKDIKEFKEELGIE
        AI +VEEEIRTLQSNLTLEQMREKE  LRKEVKELEDKLE+LR GVTLVSPEDRKAIE  Y+EKLSQWRKRKRMFKDIWDAITENSPKD+KEFKEELGIE
Subjt:  AIGKVEEEIRTLQSNLTLEQMREKEARLRKEVKELEDKLEILRGGVTLVSPEDRKAIEHAYAEKLSQWRKRKRMFKDIWDAITENSPKDIKEFKEELGIE

Query:  YDEDVGVSFQSYSDMLPQNRKRPRG
        YDEDVGV+ QS+SDMLPQNRKRPRG
Subjt:  YDEDVGVSFQSYSDMLPQNRKRPRG

XP_022150551.1 homologous-pairing protein 2 homolog [Momordica charantia]1.2e-10489.82Show/hide
Query:  MAPKSDSAEAIVLNFVNEQNRPLNSQNAADCLQKFNLKKTAVQKALDALADSGKISFKEYGKQKIYIARQDQFKIPNSEELAQMKEANAKLQEVLVEQKK
        MAPKSDSAEAIVLNFVNEQNRPLN QN AD LQKFNLKKTAVQKALD LADSG+ISFKEYGKQKIY+ARQDQFKIPN EEL QMKEANAKLQ+ L EQK+
Subjt:  MAPKSDSAEAIVLNFVNEQNRPLNSQNAADCLQKFNLKKTAVQKALDALADSGKISFKEYGKQKIYIARQDQFKIPNSEELAQMKEANAKLQEVLVEQKK

Query:  AIGKVEEEIRTLQSNLTLEQMREKEARLRKEVKELEDKLEILRGGVTLVSPEDRKAIEHAYAEKLSQWRKRKRMFKDIWDAITENSPKDIKEFKEELGIE
        AIG+VEEEIRTLQSNLTLEQMREKEA LRKEVKELEDKL+ILRGGVTLV PE+RKAIEH Y+EKLSQWRKRK+MFKDIWDAITENSPKD+KEFKEELGIE
Subjt:  AIGKVEEEIRTLQSNLTLEQMREKEARLRKEVKELEDKLEILRGGVTLVSPEDRKAIEHAYAEKLSQWRKRKRMFKDIWDAITENSPKDIKEFKEELGIE

Query:  YDEDVGVSFQSYSDMLPQNRKRPRGK
        YDEDVGV+FQS+SDMLPQNRKRPRGK
Subjt:  YDEDVGVSFQSYSDMLPQNRKRPRGK

XP_038893461.1 homologous-pairing protein 2 homolog [Benincasa hispida]1.6e-10490.71Show/hide
Query:  MAPKSDSAEAIVLNFVNEQNRPLNSQNAADCLQKFNLKKTAVQKALDALADSGKISFKEYGKQKIYIARQDQFKIPNSEELAQMKEANAKLQEVLVEQKK
        MAPKSDSAEAIVLNFVNEQNRPLNSQNAAD LQKFNLKKTAVQKALDALADSG+ISFKEYGKQKIYIARQDQF+IPNSEEL QMKEANAKLQ+ L E KK
Subjt:  MAPKSDSAEAIVLNFVNEQNRPLNSQNAADCLQKFNLKKTAVQKALDALADSGKISFKEYGKQKIYIARQDQFKIPNSEELAQMKEANAKLQEVLVEQKK

Query:  AIGKVEEEIRTLQSNLTLEQMREKEARLRKEVKELEDKLEILRGGVTLVSPEDRKAIEHAYAEKLSQWRKRKRMFKDIWDAITENSPKDIKEFKEELGIE
         I +VEEEIRTLQSNLTLEQMREKEA LRKEVKELEDKLEILRGGVTLVSPEDRKAIE  ++EKLSQWRKRKRMFKDIWDAITENSPKD+K+FKEELGIE
Subjt:  AIGKVEEEIRTLQSNLTLEQMREKEARLRKEVKELEDKLEILRGGVTLVSPEDRKAIEHAYAEKLSQWRKRKRMFKDIWDAITENSPKDIKEFKEELGIE

Query:  YDEDVGVSFQSYSDMLPQNRKRPRGK
        YDEDVGV+ QS+SDMLPQNRKRPRGK
Subjt:  YDEDVGVSFQSYSDMLPQNRKRPRGK

TrEMBL top hitse value%identityAlignment
A0A1S3BG28 Homologous-pairing protein 2 homolog8.5e-10489.82Show/hide
Query:  MAPKSDSAEAIVLNFVNEQNRPLNSQNAADCLQKFNLKKTAVQKALDALADSGKISFKEYGKQKIYIARQDQFKIPNSEELAQMKEANAKLQEVLVEQKK
        MAPKSDSAEAIVLNFVNEQNRPLNSQNAAD LQKFNLKKTAVQKALD+LAD+G+ISFKEYGKQKIYIARQDQF+IPNSEEL QMKEANAKLQ+ L E KK
Subjt:  MAPKSDSAEAIVLNFVNEQNRPLNSQNAADCLQKFNLKKTAVQKALDALADSGKISFKEYGKQKIYIARQDQFKIPNSEELAQMKEANAKLQEVLVEQKK

Query:  AIGKVEEEIRTLQSNLTLEQMREKEARLRKEVKELEDKLEILRGGVTLVSPEDRKAIEHAYAEKLSQWRKRKRMFKDIWDAITENSPKDIKEFKEELGIE
        AI +VEEEIRTLQSNLTLEQMREKE  LRKEVKELEDKLE+LR GVTLVSPEDRKAIE  Y+EKLSQWRKRKRMFKDIWDAITENSPKD+KEFKEELGIE
Subjt:  AIGKVEEEIRTLQSNLTLEQMREKEARLRKEVKELEDKLEILRGGVTLVSPEDRKAIEHAYAEKLSQWRKRKRMFKDIWDAITENSPKDIKEFKEELGIE

Query:  YDEDVGVSFQSYSDMLPQNRKRPRGK
        YDEDVGV+ QS+SDMLPQNRKRPRGK
Subjt:  YDEDVGVSFQSYSDMLPQNRKRPRGK

A0A1S3BG80 Homologous-pairing protein 2 homolog2.5e-10389.78Show/hide
Query:  MAPKSDSAEAIVLNFVNEQNRPLNSQNAADCLQKFNLKKTAVQKALDALADSGKISFKEYGKQKIYIARQDQFKIPNSEELAQMKEANAKLQEVLVEQKK
        MAPKSDSAEAIVLNFVNEQNRPLNSQNAAD LQKFNLKKTAVQKALD+LAD+G+ISFKEYGKQKIYIARQDQF+IPNSEEL QMKEANAKLQ+ L E KK
Subjt:  MAPKSDSAEAIVLNFVNEQNRPLNSQNAADCLQKFNLKKTAVQKALDALADSGKISFKEYGKQKIYIARQDQFKIPNSEELAQMKEANAKLQEVLVEQKK

Query:  AIGKVEEEIRTLQSNLTLEQMREKEARLRKEVKELEDKLEILRGGVTLVSPEDRKAIEHAYAEKLSQWRKRKRMFKDIWDAITENSPKDIKEFKEELGIE
        AI +VEEEIRTLQSNLTLEQMREKE  LRKEVKELEDKLE+LR GVTLVSPEDRKAIE  Y+EKLSQWRKRKRMFKDIWDAITENSPKD+KEFKEELGIE
Subjt:  AIGKVEEEIRTLQSNLTLEQMREKEARLRKEVKELEDKLEILRGGVTLVSPEDRKAIEHAYAEKLSQWRKRKRMFKDIWDAITENSPKDIKEFKEELGIE

Query:  YDEDVGVSFQSYSDMLPQNRKRPRG
        YDEDVGV+ QS+SDMLPQNRKRPRG
Subjt:  YDEDVGVSFQSYSDMLPQNRKRPRG

A0A5A7SYM2 Homologous-pairing protein 2 homolog8.5e-10489.82Show/hide
Query:  MAPKSDSAEAIVLNFVNEQNRPLNSQNAADCLQKFNLKKTAVQKALDALADSGKISFKEYGKQKIYIARQDQFKIPNSEELAQMKEANAKLQEVLVEQKK
        MAPKSDSAEAIVLNFVNEQNRPLNSQNAAD LQKFNLKKTAVQKALD+LAD+G+ISFKEYGKQKIYIARQDQF+IPNSEEL QMKEANAKLQ+ L E KK
Subjt:  MAPKSDSAEAIVLNFVNEQNRPLNSQNAADCLQKFNLKKTAVQKALDALADSGKISFKEYGKQKIYIARQDQFKIPNSEELAQMKEANAKLQEVLVEQKK

Query:  AIGKVEEEIRTLQSNLTLEQMREKEARLRKEVKELEDKLEILRGGVTLVSPEDRKAIEHAYAEKLSQWRKRKRMFKDIWDAITENSPKDIKEFKEELGIE
        AI +VEEEIRTLQSNLTLEQMREKE  LRKEVKELEDKLE+LR GVTLVSPEDRKAIE  Y+EKLSQWRKRKRMFKDIWDAITENSPKD+KEFKEELGIE
Subjt:  AIGKVEEEIRTLQSNLTLEQMREKEARLRKEVKELEDKLEILRGGVTLVSPEDRKAIEHAYAEKLSQWRKRKRMFKDIWDAITENSPKDIKEFKEELGIE

Query:  YDEDVGVSFQSYSDMLPQNRKRPRGK
        YDEDVGV+ QS+SDMLPQNRKRPRGK
Subjt:  YDEDVGVSFQSYSDMLPQNRKRPRGK

A0A6J1DBV0 Homologous-pairing protein 2 homolog5.9e-10589.82Show/hide
Query:  MAPKSDSAEAIVLNFVNEQNRPLNSQNAADCLQKFNLKKTAVQKALDALADSGKISFKEYGKQKIYIARQDQFKIPNSEELAQMKEANAKLQEVLVEQKK
        MAPKSDSAEAIVLNFVNEQNRPLN QN AD LQKFNLKKTAVQKALD LADSG+ISFKEYGKQKIY+ARQDQFKIPN EEL QMKEANAKLQ+ L EQK+
Subjt:  MAPKSDSAEAIVLNFVNEQNRPLNSQNAADCLQKFNLKKTAVQKALDALADSGKISFKEYGKQKIYIARQDQFKIPNSEELAQMKEANAKLQEVLVEQKK

Query:  AIGKVEEEIRTLQSNLTLEQMREKEARLRKEVKELEDKLEILRGGVTLVSPEDRKAIEHAYAEKLSQWRKRKRMFKDIWDAITENSPKDIKEFKEELGIE
        AIG+VEEEIRTLQSNLTLEQMREKEA LRKEVKELEDKL+ILRGGVTLV PE+RKAIEH Y+EKLSQWRKRK+MFKDIWDAITENSPKD+KEFKEELGIE
Subjt:  AIGKVEEEIRTLQSNLTLEQMREKEARLRKEVKELEDKLEILRGGVTLVSPEDRKAIEHAYAEKLSQWRKRKRMFKDIWDAITENSPKDIKEFKEELGIE

Query:  YDEDVGVSFQSYSDMLPQNRKRPRGK
        YDEDVGV+FQS+SDMLPQNRKRPRGK
Subjt:  YDEDVGVSFQSYSDMLPQNRKRPRGK

A0A6J1G1Y1 Homologous-pairing protein 2 homolog3.2e-10388.05Show/hide
Query:  MAPKSDSAEAIVLNFVNEQNRPLNSQNAADCLQKFNLKKTAVQKALDALADSGKISFKEYGKQKIYIARQDQFKIPNSEELAQMKEANAKLQEVLVEQKK
        MAPKSDSAEAIVLNFVNEQNRPLNSQN ADCLQKFNLKKTAVQKALDALADSGKISFKEYGKQKIY+ARQDQFKIPNSEEL QMKE+N+ LQ+ L EQKK
Subjt:  MAPKSDSAEAIVLNFVNEQNRPLNSQNAADCLQKFNLKKTAVQKALDALADSGKISFKEYGKQKIYIARQDQFKIPNSEELAQMKEANAKLQEVLVEQKK

Query:  AIGKVEEEIRTLQSNLTLEQMREKEARLRKEVKELEDKLEILRGGVTLVSPEDRKAIEHAYAEKLSQWRKRKRMFKDIWDAITENSPKDIKEFKEELGIE
        AI +VEEEIRTLQSNLTL+QMREKEARLRKEVKEL DKLEILR GVTLV PEDRKAIEH Y+EKLSQWR+RKRMFKD+WD ITENSPKD+KEFKEELGIE
Subjt:  AIGKVEEEIRTLQSNLTLEQMREKEARLRKEVKELEDKLEILRGGVTLVSPEDRKAIEHAYAEKLSQWRKRKRMFKDIWDAITENSPKDIKEFKEELGIE

Query:  YDEDVGVSFQSYSDMLPQNRKRPRGK
        YDEDVGV+ QS++DMLPQ RKRPRG+
Subjt:  YDEDVGVSFQSYSDMLPQNRKRPRGK

SwissProt top hitse value%identityAlignment
O35047 Homologous-pairing protein 2 homolog8.1e-2737.68Show/hide
Query:  APKSDSAEAIVLNFVNEQNRPLNSQNAADCLQK-FNLKKTAVQKALDALADSGKISFKEYGKQKIYIARQDQFKIPNSEELAQMKEANAKLQEVLVEQKK
        A  +  A  I+L ++ EQNRP ++Q+    LQK   L K AV KALD LA  GKI  K YGKQKIY A Q+QF   +  +L  +  +   L   +   ++
Subjt:  APKSDSAEAIVLNFVNEQNRPLNSQNAADCLQK-FNLKKTAVQKALDALADSGKISFKEYGKQKIYIARQDQFKIPNSEELAQMKEANAKLQEVLVEQKK

Query:  AIGKVEEEIRTLQSNLTLEQMREKEARLRKEVKELEDKLEILRGGVTLVSPEDRKAIEHAYAEKLSQWRKRKRMFKDIWDAITENSPKDIKEFKEELGIE
        +   +E E++ L S LT  +M+++   L+KE  +  ++L+ ++     V+PE+++ +     +   +WRKRKRM  ++ DAI E  PK  K+F EE+GIE
Subjt:  AIGKVEEEIRTLQSNLTLEQMREKEARLRKEVKELEDKLEILRGGVTLVSPEDRKAIEHAYAEKLSQWRKRKRMFKDIWDAITENSPKDIKEFKEELGIE

Query:  YDEDVGV
         DED  V
Subjt:  YDEDVGV

Q63ZL2 Homologous-pairing protein 2 homolog6.6e-2937.86Show/hide
Query:  KSDSAEAIVLNFVNEQNRPLNSQNAADCLQK-FNLKKTAVQKALDALADSGKISFKEYGKQKIYIARQDQFKIPNSEELAQMKEANAKLQEVLVEQKKAI
        K  +A +I+L ++N+QNRP ++Q+    LQ+   L KTAV K ++ LA  GKI  K YGKQKIY A Q+QF   +  EL  +     +L   L   +++ 
Subjt:  KSDSAEAIVLNFVNEQNRPLNSQNAADCLQK-FNLKKTAVQKALDALADSGKISFKEYGKQKIYIARQDQFKIPNSEELAQMKEANAKLQEVLVEQKKAI

Query:  GKVEEEIRTLQSNLTLEQMREKEARLRKEVKELEDKLEILRGGVTLVSPEDRKAIEHAYAEKLSQWRKRKRMFKDIWDAITENSPKDIKEFKEELGIEYD
         ++E E++ L S+LT E+M ++ + L++E    E KL  ++     V+P +++ +         +W+KRKRM  DI+DAI E  PK  K+F EE+G+E D
Subjt:  GKVEEEIRTLQSNLTLEQMREKEARLRKEVKELEDKLEILRGGVTLVSPEDRKAIEHAYAEKLSQWRKRKRMFKDIWDAITENSPKDIKEFKEELGIEYD

Query:  EDVGVS
        ED  V+
Subjt:  EDVGVS

Q91ZY6 Homologous-pairing protein 2 homolog3.6e-2738.46Show/hide
Query:  APKSDSAEAIVLNFVNEQNRPLNSQNAADCLQK-FNLKKTAVQKALDALADSGKISFKEYGKQKIYIARQDQFKIPNSEELAQMKEANAKLQEVLVEQKK
        A  +  A  IVL ++ EQNRP ++Q+    LQK   L K AV KALD LA  GKI  K YGKQKIY A QDQF   +  +L  +  +   L   +   ++
Subjt:  APKSDSAEAIVLNFVNEQNRPLNSQNAADCLQK-FNLKKTAVQKALDALADSGKISFKEYGKQKIYIARQDQFKIPNSEELAQMKEANAKLQEVLVEQKK

Query:  AIGKVEEEIRTLQSNLTLEQMREKEARLRKEVKELEDKLEILRGGVTLVSPEDRKAIEHAYAEKLSQWRKRKRMFKDIWDAITENSPKDIKEFKEELGIE
        +   +E E++ L S LT  +M+ +   L+KE     ++L+ ++     V+PE+++ +     +   +WRKRKRM  ++ DAI E  PK  K+F EE+GIE
Subjt:  AIGKVEEEIRTLQSNLTLEQMREKEARLRKEVKELEDKLEILRGGVTLVSPEDRKAIEHAYAEKLSQWRKRKRMFKDIWDAITENSPKDIKEFKEELGIE

Query:  YDEDVGVS
         DED  V+
Subjt:  YDEDVGVS

Q9FX64 Homologous-pairing protein 2 homolog5.9e-9476.55Show/hide
Query:  MAPKSDSAEAIVLNFVNEQNRPLNSQNAADCLQKFNLKKTAVQKALDALADSGKISFKEYGKQKIYIARQDQFKIPNSEELAQMKEANAKLQEVLVEQKK
        MAPKSD+ EAIVLNFVNEQN+PLN+QNAAD LQKFNLKKTAVQKALD+LAD+GKI+FKEYGKQKIYIARQDQF+IPNSEELAQMKE NAKLQE L E+KK
Subjt:  MAPKSDSAEAIVLNFVNEQNRPLNSQNAADCLQKFNLKKTAVQKALDALADSGKISFKEYGKQKIYIARQDQFKIPNSEELAQMKEANAKLQEVLVEQKK

Query:  AIGKVEEEIRTLQSNLTLEQMREKEARLRKEVKELEDKLEILRGGVTLVSPEDRKAIEHAYAEKLSQWRKRKRMFKDIWDAITENSPKDIKEFKEELGIE
         I  VE EI++LQSNLTLE+++EK+A+LRKEVKE+E+KL  LR G+TLV PED+KA+E  YA+K++QWRKRKRMF+DIWD +TENSPKD+KE KEELGIE
Subjt:  AIGKVEEEIRTLQSNLTLEQMREKEARLRKEVKELEDKLEILRGGVTLVSPEDRKAIEHAYAEKLSQWRKRKRMFKDIWDAITENSPKDIKEFKEELGIE

Query:  YDEDVGVSFQSYSDMLPQNRKRPRGK
        YDEDVG+SFQ+Y+D++   +KRPRG+
Subjt:  YDEDVGVSFQSYSDMLPQNRKRPRGK

Q9P2W1 Homologous-pairing protein 2 homolog1.2e-2536.54Show/hide
Query:  APKSDSAEAIVLNFVNEQNRPLNSQNAADCLQK-FNLKKTAVQKALDALADSGKISFKEYGKQKIYIARQDQFKIPNSEELAQMKEANAKLQEVLVEQKK
        A  +  A  I+L ++ EQNRP +SQ+    LQ+   L K  V K L+ LA  GKI  K YGKQKIY A QDQF + +  +L  +      L   +   ++
Subjt:  APKSDSAEAIVLNFVNEQNRPLNSQNAADCLQK-FNLKKTAVQKALDALADSGKISFKEYGKQKIYIARQDQFKIPNSEELAQMKEANAKLQEVLVEQKK

Query:  AIGKVEEEIRTLQSNLTLEQMREKEARLRKEVKELEDKLEILRGGVTLVSPEDRKAIEHAYAEKLSQWRKRKRMFKDIWDAITENSPKDIKEFKEELGIE
        +   +E E++ L S LT  +M+++   L+KE     ++L+ ++     V+PE+++ +     +   +WRKRKRM  ++ DAI E  PK  K+F EE+GIE
Subjt:  AIGKVEEEIRTLQSNLTLEQMREKEARLRKEVKELEDKLEILRGGVTLVSPEDRKAIEHAYAEKLSQWRKRKRMFKDIWDAITENSPKDIKEFKEELGIE

Query:  YDEDVGVS
         DED  V+
Subjt:  YDEDVGVS

Arabidopsis top hitse value%identityAlignment
AT1G13330.1 Arabidopsis Hop2 homolog4.2e-9576.55Show/hide
Query:  MAPKSDSAEAIVLNFVNEQNRPLNSQNAADCLQKFNLKKTAVQKALDALADSGKISFKEYGKQKIYIARQDQFKIPNSEELAQMKEANAKLQEVLVEQKK
        MAPKSD+ EAIVLNFVNEQN+PLN+QNAAD LQKFNLKKTAVQKALD+LAD+GKI+FKEYGKQKIYIARQDQF+IPNSEELAQMKE NAKLQE L E+KK
Subjt:  MAPKSDSAEAIVLNFVNEQNRPLNSQNAADCLQKFNLKKTAVQKALDALADSGKISFKEYGKQKIYIARQDQFKIPNSEELAQMKEANAKLQEVLVEQKK

Query:  AIGKVEEEIRTLQSNLTLEQMREKEARLRKEVKELEDKLEILRGGVTLVSPEDRKAIEHAYAEKLSQWRKRKRMFKDIWDAITENSPKDIKEFKEELGIE
         I  VE EI++LQSNLTLE+++EK+A+LRKEVKE+E+KL  LR G+TLV PED+KA+E  YA+K++QWRKRKRMF+DIWD +TENSPKD+KE KEELGIE
Subjt:  AIGKVEEEIRTLQSNLTLEQMREKEARLRKEVKELEDKLEILRGGVTLVSPEDRKAIEHAYAEKLSQWRKRKRMFKDIWDAITENSPKDIKEFKEELGIE

Query:  YDEDVGVSFQSYSDMLPQNRKRPRGK
        YDEDVG+SFQ+Y+D++   +KRPRG+
Subjt:  YDEDVGVSFQSYSDMLPQNRKRPRGK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCCCAAATCCGATAGCGCAGAAGCGATCGTTCTCAACTTCGTAAACGAGCAAAATCGTCCATTAAACTCTCAAAATGCTGCCGATTGCTTACAAAAGTTCAATCT
CAAGAAGACGGCGGTGCAGAAAGCACTGGACGCTCTTGCGGATAGTGGAAAGATTTCTTTCAAGGAATATGGCAAACAGAAGATATACATTGCCCGGCAAGACCAATTCA
AGATCCCAAACAGCGAGGAACTTGCTCAGATGAAGGAAGCAAACGCCAAATTGCAGGAAGTTCTGGTTGAGCAAAAAAAAGCTATTGGCAAAGTTGAGGAAGAAATTCGA
ACATTGCAGTCTAATTTAACATTGGAACAGATGCGGGAAAAGGAAGCCAGGCTTAGAAAGGAGGTTAAGGAATTGGAAGACAAATTGGAAATATTGCGTGGAGGTGTTAC
ACTGGTGAGCCCAGAAGACAGAAAAGCCATCGAGCATGCATATGCTGAGAAATTAAGCCAGTGGCGAAAGCGAAAAAGGATGTTCAAAGATATATGGGATGCTATCACTG
AGAACTCACCTAAGGATATAAAAGAATTTAAGGAAGAACTTGGCATCGAGTACGACGAAGACGTAGGCGTGAGTTTTCAGTCATACAGTGACATGTTACCGCAAAATCGA
AAACGGCCCAGGGGAAAGTGA
mRNA sequenceShow/hide mRNA sequence
TTTCGATTTATTTTATATTTTAAAAAATATATATTTAAGAAAATCTTGTACGCATCGGCTTCCTCTAGAAGTGAAGGGAAAAGCACTCGCAAATTTTCCCGCTCATTTCT
CTGCACTTCACCGATCAATGGCTCCCAAATCCGATAGCGCAGAAGCGATCGTTCTCAACTTCGTAAACGAGCAAAATCGTCCATTAAACTCTCAAAATGCTGCCGATTGC
TTACAAAAGTTCAATCTCAAGAAGACGGCGGTGCAGAAAGCACTGGACGCTCTTGCGGATAGTGGAAAGATTTCTTTCAAGGAATATGGCAAACAGAAGATATACATTGC
CCGGCAAGACCAATTCAAGATCCCAAACAGCGAGGAACTTGCTCAGATGAAGGAAGCAAACGCCAAATTGCAGGAAGTTCTGGTTGAGCAAAAAAAAGCTATTGGCAAAG
TTGAGGAAGAAATTCGAACATTGCAGTCTAATTTAACATTGGAACAGATGCGGGAAAAGGAAGCCAGGCTTAGAAAGGAGGTTAAGGAATTGGAAGACAAATTGGAAATA
TTGCGTGGAGGTGTTACACTGGTGAGCCCAGAAGACAGAAAAGCCATCGAGCATGCATATGCTGAGAAATTAAGCCAGTGGCGAAAGCGAAAAAGGATGTTCAAAGATAT
ATGGGATGCTATCACTGAGAACTCACCTAAGGATATAAAAGAATTTAAGGAAGAACTTGGCATCGAGTACGACGAAGACGTAGGCGTGAGTTTTCAGTCATACAGTGACA
TGTTACCGCAAAATCGAAAACGGCCCAGGGGAAAGTGAGTAATACCATAAACTGGGGCGTCCAACAGGAGTAGGTAAAAAAAGAATCATATGCTTATATTACTTTTCTTT
TTTCAATCCGTGCTTAAAGGCAAATGCAGGTAGATTCTGTCTGCCTAGAGCTTGGGTTTTGTATCACGAATACTTATCAGGTTGCTTTTGGTTATTAATGCTAAGTAAGT
TGAAGGCTCAGTAAGAAACTGCCGCTCCTGCTTCTTTTTTTCTTGAATTGGCTTTTACAGTATTCTCATATAATTTGTCAGTGAGGTTTTAAATGGTTTAACCAGGTACC
TTTTAACTAAACTAATAATGCTTCTGCAATAAAAATGGTAATGG
Protein sequenceShow/hide protein sequence
MAPKSDSAEAIVLNFVNEQNRPLNSQNAADCLQKFNLKKTAVQKALDALADSGKISFKEYGKQKIYIARQDQFKIPNSEELAQMKEANAKLQEVLVEQKKAIGKVEEEIR
TLQSNLTLEQMREKEARLRKEVKELEDKLEILRGGVTLVSPEDRKAIEHAYAEKLSQWRKRKRMFKDIWDAITENSPKDIKEFKEELGIEYDEDVGVSFQSYSDMLPQNR
KRPRGK