; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0012178 (gene) of Chayote v1 genome

Gene IDSed0012178
OrganismSechium edule (Chayote v1)
Description30S ribosomal protein S11
Genome locationLG02:52352690..52354410
RNA-Seq ExpressionSed0012178
SyntenySed0012178
Gene Ontology termsGO:0000028 - ribosomal small subunit assembly (biological process)
GO:0000462 - maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process)
GO:0006412 - translation (biological process)
GO:0005763 - mitochondrial small ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0048027 - mRNA 5'-UTR binding (molecular function)
GO:0070181 - small ribosomal subunit rRNA binding (molecular function)
InterPro domainsIPR001971 - Ribosomal protein S11
IPR036967 - Ribosomal protein S11 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7030891.1 putative ribosomal protein S11, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]3.6e-10361.9Show/hide
Query:  LFSLLRSSSLSHGGSSFSPSRLSISPFLGSDARSSMSSRHSSSRSDLTGSVQLDKQVPACVDLPQGDYV-----IVGRGWKALGAQGPCCGLARWTDNVF
        L SL RSSSLSH GSSFS  RLSISPF G+DARS MSS H S  S+++GSVQLD+Q   CVDLP+GD V     IVGR WKALGAQGPC GLAR ++NV 
Subjt:  LFSLLRSSSLSHGGSSFSPSRLSISPFLGSDARSSMSSRHSSSRSDLTGSVQLDKQVPACVDLPQGDYV-----IVGRGWKALGAQGPCCGLARWTDNVF

Query:  VPYGTSSRCY-HDDSRSNADTERKFESTSFGRGNVEEDGRGFMRNTSFPRPPNVEHNAHTERKFESASFVGENLEENGRGFMGSTPFPRPPKMEHNADTE
        VPY +SSRCY H D R NADT R F+S +F                                                                      
Subjt:  VPYGTSSRCY-HDDSRSNADTERKFESTSFGRGNVEEDGRGFMRNTSFPRPPNVEHNAHTERKFESASFVGENLEENGRGFMGSTPFPRPPKMEHNADTE

Query:  RKFDSTSYVRGALEEDGRGFMGSNPFPRPPKMEHNADIVHFKLMRNNTFITVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEAIAEYVGRESRKLGLKS
                VRG LEEDG  FMGS+ FPRPP MEHNADIVH KLMRNNTFITVTDNKGNTKLKAS+GRLEELKGGPKLSRYAAEA AEYVGRES+KLGLKS
Subjt:  RKFDSTSYVRGALEEDGRGFMGSNPFPRPPKMEHNADIVHFKLMRNNTFITVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEAIAEYVGRESRKLGLKS

Query:  VVMRVKGFTYFKKKRQAIMSWRDGYTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV
        VVMRVKGFTYFKKK+QAI+SWRDG+TDS+ DQNPIVYIEDTTRRAHNGCRLPKQRRV
Subjt:  VVMRVKGFTYFKKKRQAIMSWRDGYTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV

XP_022141322.1 probable ribosomal protein S11, mitochondrial [Momordica charantia]6.6e-9761.17Show/hide
Query:  LFSLLRSSSLSHGGSSFSPSRLSISPFLGSDARSSMSSRHSSSRSDLTGSVQLDKQVPACVDLPQGD------YVIVGRGWKALGAQGPCCGLARWTDNV
        L SL RSSSLSHG SS SP R SIS F GSDARS M+S H   RSDLTGSVQLD QV  C+DLPQGD       + VGR WKALG  G      R  +NV
Subjt:  LFSLLRSSSLSHGGSSFSPSRLSISPFLGSDARSSMSSRHSSSRSDLTGSVQLDKQVPACVDLPQGD------YVIVGRGWKALGAQGPCCGLARWTDNV

Query:  FVPYGTSSRCY-HDDSRSNADTERKFESTSFGRGNVEEDGRGFMRNTSFPRPPNVEHNAHTERKFESASFVGENLEENGRGFMGSTPFPRPPKMEHNADT
         VPY  +S+CY H DSR NADT R F+S +F                                                                     
Subjt:  FVPYGTSSRCY-HDDSRSNADTERKFESTSFGRGNVEEDGRGFMRNTSFPRPPNVEHNAHTERKFESASFVGENLEENGRGFMGSTPFPRPPKMEHNADT

Query:  ERKFDSTSYVRGALEEDGRGFMGSNPFPRPPKMEHNADIVHFKLMRNNTFITVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEAIAEYVGRESRKLGLK
                 VRG LEEDGR FM  +PFPRPP ME NADIVH KLMRNNTFITVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEAIAEYVGRESRKLGLK
Subjt:  ERKFDSTSYVRGALEEDGRGFMGSNPFPRPPKMEHNADIVHFKLMRNNTFITVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEAIAEYVGRESRKLGLK

Query:  SVVMRVKGFTYFKKKRQAIMSWRDGYTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV
        SVVMRVKGFTYFKKKRQAIMSWRDG+TDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV
Subjt:  SVVMRVKGFTYFKKKRQAIMSWRDGYTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV

XP_022942058.1 probable ribosomal protein S11, mitochondrial [Cucurbita moschata]3.6e-10361.9Show/hide
Query:  LFSLLRSSSLSHGGSSFSPSRLSISPFLGSDARSSMSSRHSSSRSDLTGSVQLDKQVPACVDLPQGDYV-----IVGRGWKALGAQGPCCGLARWTDNVF
        L SL RSSSLSH GSSFS SRLSISPF G+DARS MSS H S  S+++GSVQLD+Q   CV+LP+GD V     IVGR WKALGAQGPC GLAR ++NV 
Subjt:  LFSLLRSSSLSHGGSSFSPSRLSISPFLGSDARSSMSSRHSSSRSDLTGSVQLDKQVPACVDLPQGDYV-----IVGRGWKALGAQGPCCGLARWTDNVF

Query:  VPYGTSSRCY-HDDSRSNADTERKFESTSFGRGNVEEDGRGFMRNTSFPRPPNVEHNAHTERKFESASFVGENLEENGRGFMGSTPFPRPPKMEHNADTE
        VPY +SSRCY H D R NADT R F+S +F                                                                      
Subjt:  VPYGTSSRCY-HDDSRSNADTERKFESTSFGRGNVEEDGRGFMRNTSFPRPPNVEHNAHTERKFESASFVGENLEENGRGFMGSTPFPRPPKMEHNADTE

Query:  RKFDSTSYVRGALEEDGRGFMGSNPFPRPPKMEHNADIVHFKLMRNNTFITVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEAIAEYVGRESRKLGLKS
                VRG LEEDG  FMGS+ FPRPP MEHNADIVH KLMRNNTFITVTDNKGNTKLKAS+GRLEELKGGPKLSRYAAEA AEYVGRES+KLGLKS
Subjt:  RKFDSTSYVRGALEEDGRGFMGSNPFPRPPKMEHNADIVHFKLMRNNTFITVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEAIAEYVGRESRKLGLKS

Query:  VVMRVKGFTYFKKKRQAIMSWRDGYTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV
        VVMRVKGFTYFKKK+QAI+SWRDG+TDS+ DQNPIVYIEDTTRRAHNGCRLPKQRRV
Subjt:  VVMRVKGFTYFKKKRQAIMSWRDGYTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV

XP_022999735.1 probable ribosomal protein S11, mitochondrial [Cucurbita maxima]1.3e-10563.76Show/hide
Query:  LFSLLRSSSLSHGGSSFSPSRLSISPFLGSDARSSMSSRHSSSRSDLTGSVQLDKQVPACVDLPQGDYV-----IVGRGWKALGAQGPCCGLARWTDNVF
        L SL RSSSLSH GSSFS SR+SISPF G+D RS M S HSS  SDL+GSVQLD+Q   CVDLP+GD V     IVGR WKALGAQGPC GLAR ++NV 
Subjt:  LFSLLRSSSLSHGGSSFSPSRLSISPFLGSDARSSMSSRHSSSRSDLTGSVQLDKQVPACVDLPQGDYV-----IVGRGWKALGAQGPCCGLARWTDNVF

Query:  VPYGTSSRCYHDDSRSNADTERKFESTSFGRGNVEEDGRGFMRNTSFPRPPNVEHNAHTERKFESASFVGENLEENGRGFMGSTPFPRPPKMEHNADTER
        VPY +SSRCY                       V  DG                                                  PP    NADT R
Subjt:  VPYGTSSRCYHDDSRSNADTERKFESTSFGRGNVEEDGRGFMRNTSFPRPPNVEHNAHTERKFESASFVGENLEENGRGFMGSTPFPRPPKMEHNADTER

Query:  KFDSTSYVRGALEEDGRGFMGSNPFPRPPKMEHNADIVHFKLMRNNTFITVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEAIAEYVGRESRKLGLKSV
         F S ++VRG LEEDG  FMGS+ FPRPP MEHNADIVH KLMRNNTFITVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEA AEYVGRESRKLGLKSV
Subjt:  KFDSTSYVRGALEEDGRGFMGSNPFPRPPKMEHNADIVHFKLMRNNTFITVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEAIAEYVGRESRKLGLKSV

Query:  VMRVKGFTYFKKKRQAIMSWRDGYTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV
        VMRVKGFTYFKKK+QAI+SWRDG+TDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV
Subjt:  VMRVKGFTYFKKKRQAIMSWRDGYTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV

XP_023526167.1 probable ribosomal protein S11, mitochondrial [Cucurbita pepo subsp. pepo]1.3e-10061.06Show/hide
Query:  LFSLLRSSSLSHGGSSFSPSRLSISPFLGSDARSSMSSRHSSSRSDLTGSVQLDKQVPACVDLPQGDYV-----IVGRGWKALGAQGPCCGLARWTDNVF
        L SL RSSSLSH GSSFS SRLSISPF G+DARS MSS H S  S+++GSVQ+D+Q   CVDLP+GD V     IVGR  K LGAQGPC GLAR ++NV 
Subjt:  LFSLLRSSSLSHGGSSFSPSRLSISPFLGSDARSSMSSRHSSSRSDLTGSVQLDKQVPACVDLPQGDYV-----IVGRGWKALGAQGPCCGLARWTDNVF

Query:  VPYGTSSRCY-HDDSRSNADTERKFESTSFGRGNVEEDGRGFMRNTSFPRPPNVEHNAHTERKFESASFVGENLEENGRGFMGSTPFPRPPKMEHNADTE
        VPY +SSRCY H D R NADT R F+S +F                                                                      
Subjt:  VPYGTSSRCY-HDDSRSNADTERKFESTSFGRGNVEEDGRGFMRNTSFPRPPNVEHNAHTERKFESASFVGENLEENGRGFMGSTPFPRPPKMEHNADTE

Query:  RKFDSTSYVRGALEEDGRGFMGSNPFPRPPKMEHNADIVHFKLMRNNTFITVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEAIAEYVGRESRKLGLKS
                VRG LEED   FMGS+ FPRPP MEHNADIVH KLMRNNTFITVTDNKGNTKLKAS+GRLEELKGGPKLSRYAAEA AEYVGRES+KLGLKS
Subjt:  RKFDSTSYVRGALEEDGRGFMGSNPFPRPPKMEHNADIVHFKLMRNNTFITVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEAIAEYVGRESRKLGLKS

Query:  VVMRVKGFTYFKKKRQAIMSWRDGYTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV
        VVMRVKGFTYFKKK+QAI+SWRDG+TDS+ DQNPIVYIEDTTRRAHNGCRLPKQRRV
Subjt:  VVMRVKGFTYFKKKRQAIMSWRDGYTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV

TrEMBL top hitse value%identityAlignment
A0A0A0KVQ8 Uncharacterized protein3.1e-8455.4Show/hide
Query:  LFSLLRSSSLSHGGSSFSPSRLSISPFLGSDARSSMSSRHSSSRSDLTGSVQLDKQVPACV-DLPQGDYVIVGRGWKALGAQGPCCGLARWTDNVFVPYG
        L SL RSSSLS    SFSPSRLSISPF+GSDA S MSS H   RSDLTGS+Q   Q   C+ D       IVGRGWK++G QGP  GLAR ++ V +PY 
Subjt:  LFSLLRSSSLSHGGSSFSPSRLSISPFLGSDARSSMSSRHSSSRSDLTGSVQLDKQVPACV-DLPQGDYVIVGRGWKALGAQGPCCGLARWTDNVFVPYG

Query:  TSSRCYHDDSRSNADTERKFESTSFGRGNVEEDGRGFMRNTSFPRPPNVEHNAHTERKFESASFVGENLEENGRGFMGSTPFPRPPKMEHNADTERKFDS
         SSRCY                        E D R                                               P PP      DT R    
Subjt:  TSSRCYHDDSRSNADTERKFESTSFGRGNVEEDGRGFMRNTSFPRPPNVEHNAHTERKFESASFVGENLEENGRGFMGSTPFPRPPKMEHNADTERKFDS

Query:  TSYVRGALEEDGRGFMGSNPFPRPPKMEHNADIVHFKLMRNNTFITVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRV
         ++VRG LEE+ RGF G+  F RP  MEHNADIVH KLMRNN+F+TVTDNKGNTKLKASAGRLE   GG KLSRY+A++IAEYVGRESRKLGLKSVVMRV
Subjt:  TSYVRGALEEDGRGFMGSNPFPRPPKMEHNADIVHFKLMRNNTFITVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRV

Query:  KGFTYFKKKRQAIMSWRDGYTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV
        KGFT+FKKK+QAI+SWRDG+TDSR+DQNPIVY+EDTTRRAHNGCRLPK+RRV
Subjt:  KGFTYFKKKRQAIMSWRDGYTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV

A0A5A7TPI6 Putative ribosomal protein S113.9e-7954.55Show/hide
Query:  LFSLLRSSSLSHGGSSFSPSRLSISPFLGSDARSSMSSRHSSSRSDLTGSVQLDKQVPACVDLPQGDYVIVGRGWKALGAQGPCCGLARWTDNVFVPYGT
        L  L RSSSLS    SFSPSRLSISPF+GSDA S  S   S   S LTGS+Q        V        IVGRGWKA+G QGP  GLAR T++V VPY  
Subjt:  LFSLLRSSSLSHGGSSFSPSRLSISPFLGSDARSSMSSRHSSSRSDLTGSVQLDKQVPACVDLPQGDYVIVGRGWKALGAQGPCCGLARWTDNVFVPYGT

Query:  SSRCYHDDSRSNADTERKFESTSFGRGNVEEDGRGFMRNTSFPRPPNVEHNAHTERKFESASFVGENLEENGRGFMGSTPFPRPPKMEHNADTERKFDST
        SSRCY                        E D R                                               P PP      DT R   + 
Subjt:  SSRCYHDDSRSNADTERKFESTSFGRGNVEEDGRGFMRNTSFPRPPNVEHNAHTERKFESASFVGENLEENGRGFMGSTPFPRPPKMEHNADTERKFDST

Query:  SYVRGALEEDGRGFMGSNPFPRPPKMEHNADIVHFKLMRNNTFITVTDNKGNTKLKASAGRLEELK-GGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRV
        ++VRG LEED + F     + RP  MEHNADIVH KLMRNN F+TVTDNKGNTKLKASAGRLEELK GG KLSRY+ ++IAEYVGRESRKLGLKSVVMRV
Subjt:  SYVRGALEEDGRGFMGSNPFPRPPKMEHNADIVHFKLMRNNTFITVTDNKGNTKLKASAGRLEELK-GGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRV

Query:  KGFTYFKKKRQAIMSWRDGYTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV
        KGFT+FKKK+QAI+SWRDG+TDSRSDQNPIVYIEDTTRRAHNGCRLPK+RRV
Subjt:  KGFTYFKKKRQAIMSWRDGYTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV

A0A6J1CJJ5 probable ribosomal protein S11, mitochondrial3.2e-9761.17Show/hide
Query:  LFSLLRSSSLSHGGSSFSPSRLSISPFLGSDARSSMSSRHSSSRSDLTGSVQLDKQVPACVDLPQGD------YVIVGRGWKALGAQGPCCGLARWTDNV
        L SL RSSSLSHG SS SP R SIS F GSDARS M+S H   RSDLTGSVQLD QV  C+DLPQGD       + VGR WKALG  G      R  +NV
Subjt:  LFSLLRSSSLSHGGSSFSPSRLSISPFLGSDARSSMSSRHSSSRSDLTGSVQLDKQVPACVDLPQGD------YVIVGRGWKALGAQGPCCGLARWTDNV

Query:  FVPYGTSSRCY-HDDSRSNADTERKFESTSFGRGNVEEDGRGFMRNTSFPRPPNVEHNAHTERKFESASFVGENLEENGRGFMGSTPFPRPPKMEHNADT
         VPY  +S+CY H DSR NADT R F+S +F                                                                     
Subjt:  FVPYGTSSRCY-HDDSRSNADTERKFESTSFGRGNVEEDGRGFMRNTSFPRPPNVEHNAHTERKFESASFVGENLEENGRGFMGSTPFPRPPKMEHNADT

Query:  ERKFDSTSYVRGALEEDGRGFMGSNPFPRPPKMEHNADIVHFKLMRNNTFITVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEAIAEYVGRESRKLGLK
                 VRG LEEDGR FM  +PFPRPP ME NADIVH KLMRNNTFITVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEAIAEYVGRESRKLGLK
Subjt:  ERKFDSTSYVRGALEEDGRGFMGSNPFPRPPKMEHNADIVHFKLMRNNTFITVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEAIAEYVGRESRKLGLK

Query:  SVVMRVKGFTYFKKKRQAIMSWRDGYTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV
        SVVMRVKGFTYFKKKRQAIMSWRDG+TDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV
Subjt:  SVVMRVKGFTYFKKKRQAIMSWRDGYTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV

A0A6J1FTT5 probable ribosomal protein S11, mitochondrial1.7e-10361.9Show/hide
Query:  LFSLLRSSSLSHGGSSFSPSRLSISPFLGSDARSSMSSRHSSSRSDLTGSVQLDKQVPACVDLPQGDYV-----IVGRGWKALGAQGPCCGLARWTDNVF
        L SL RSSSLSH GSSFS SRLSISPF G+DARS MSS H S  S+++GSVQLD+Q   CV+LP+GD V     IVGR WKALGAQGPC GLAR ++NV 
Subjt:  LFSLLRSSSLSHGGSSFSPSRLSISPFLGSDARSSMSSRHSSSRSDLTGSVQLDKQVPACVDLPQGDYV-----IVGRGWKALGAQGPCCGLARWTDNVF

Query:  VPYGTSSRCY-HDDSRSNADTERKFESTSFGRGNVEEDGRGFMRNTSFPRPPNVEHNAHTERKFESASFVGENLEENGRGFMGSTPFPRPPKMEHNADTE
        VPY +SSRCY H D R NADT R F+S +F                                                                      
Subjt:  VPYGTSSRCY-HDDSRSNADTERKFESTSFGRGNVEEDGRGFMRNTSFPRPPNVEHNAHTERKFESASFVGENLEENGRGFMGSTPFPRPPKMEHNADTE

Query:  RKFDSTSYVRGALEEDGRGFMGSNPFPRPPKMEHNADIVHFKLMRNNTFITVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEAIAEYVGRESRKLGLKS
                VRG LEEDG  FMGS+ FPRPP MEHNADIVH KLMRNNTFITVTDNKGNTKLKAS+GRLEELKGGPKLSRYAAEA AEYVGRES+KLGLKS
Subjt:  RKFDSTSYVRGALEEDGRGFMGSNPFPRPPKMEHNADIVHFKLMRNNTFITVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEAIAEYVGRESRKLGLKS

Query:  VVMRVKGFTYFKKKRQAIMSWRDGYTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV
        VVMRVKGFTYFKKK+QAI+SWRDG+TDS+ DQNPIVYIEDTTRRAHNGCRLPKQRRV
Subjt:  VVMRVKGFTYFKKKRQAIMSWRDGYTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV

A0A6J1KGF8 probable ribosomal protein S11, mitochondrial6.4e-10663.76Show/hide
Query:  LFSLLRSSSLSHGGSSFSPSRLSISPFLGSDARSSMSSRHSSSRSDLTGSVQLDKQVPACVDLPQGDYV-----IVGRGWKALGAQGPCCGLARWTDNVF
        L SL RSSSLSH GSSFS SR+SISPF G+D RS M S HSS  SDL+GSVQLD+Q   CVDLP+GD V     IVGR WKALGAQGPC GLAR ++NV 
Subjt:  LFSLLRSSSLSHGGSSFSPSRLSISPFLGSDARSSMSSRHSSSRSDLTGSVQLDKQVPACVDLPQGDYV-----IVGRGWKALGAQGPCCGLARWTDNVF

Query:  VPYGTSSRCYHDDSRSNADTERKFESTSFGRGNVEEDGRGFMRNTSFPRPPNVEHNAHTERKFESASFVGENLEENGRGFMGSTPFPRPPKMEHNADTER
        VPY +SSRCY                       V  DG                                                  PP    NADT R
Subjt:  VPYGTSSRCYHDDSRSNADTERKFESTSFGRGNVEEDGRGFMRNTSFPRPPNVEHNAHTERKFESASFVGENLEENGRGFMGSTPFPRPPKMEHNADTER

Query:  KFDSTSYVRGALEEDGRGFMGSNPFPRPPKMEHNADIVHFKLMRNNTFITVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEAIAEYVGRESRKLGLKSV
         F S ++VRG LEEDG  FMGS+ FPRPP MEHNADIVH KLMRNNTFITVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEA AEYVGRESRKLGLKSV
Subjt:  KFDSTSYVRGALEEDGRGFMGSNPFPRPPKMEHNADIVHFKLMRNNTFITVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEAIAEYVGRESRKLGLKSV

Query:  VMRVKGFTYFKKKRQAIMSWRDGYTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV
        VMRVKGFTYFKKK+QAI+SWRDG+TDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV
Subjt:  VMRVKGFTYFKKKRQAIMSWRDGYTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV

SwissProt top hitse value%identityAlignment
A5D5E6 30S ribosomal protein S113.7e-1039.17Show/hide
Query:  IVHFKLMRNNTFITVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTYFKKKRQAIMSWRDGYTDSRSDQNPIVY
        + H K   NNT +T+TD KGNT   +SAG++   KG  K + +AA+  AE   RE+ + GLK V + VKG      +  AI S +    +       +  
Subjt:  IVHFKLMRNNTFITVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTYFKKKRQAIMSWRDGYTDSRSDQNPIVY

Query:  IEDTTRRAHNGCRLPKQRRV
        I+D T   HNGCR PK+RRV
Subjt:  IEDTTRRAHNGCRLPKQRRV

A8ETK4 30S ribosomal protein S114.9e-1035.83Show/hide
Query:  IVHFKLMRNNTFITVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTYFKKKRQAIMSWRDGYTDSRSDQNPIVY
        IVH     NNT +TVTDN GN    +SAG L   KG  K + +AA+A  E    ++ + G+K+V ++++G    +      +   DG          + +
Subjt:  IVHFKLMRNNTFITVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTYFKKKRQAIMSWRDGYTDSRSDQNPIVY

Query:  IEDTTRRAHNGCRLPKQRRV
        ++D T  AHNGCR PK+RRV
Subjt:  IEDTTRRAHNGCRLPKQRRV

B3QYE8 30S ribosomal protein S116.4e-1036.88Show/hide
Query:  MGSNPFPRPPKMEHNAD-IVHFKLMRNNTFITVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTYFKKKRQAIM
        M + P  +  K+    D IVH K   NN  +T+TD  GNT   ++AG+    KG  K + YA++  AE   +E+  LG++ V +R+KG            
Subjt:  MGSNPFPRPPKMEHNAD-IVHFKLMRNNTFITVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTYFKKKRQAIM

Query:  SWRDGYTDSRSDQN---PIVYIEDTTRRAHNGCRLPKQRRV
        S RD     RS QN    +  I D T   HNGCR PK+RRV
Subjt:  SWRDGYTDSRSDQN---PIVYIEDTTRRAHNGCRLPKQRRV

P46746 Ribosomal protein S11, mitochondrial4.4e-1135.71Show/hide
Query:  MEHNADIVHFKLMRNNTFITVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTYFKKKRQAIMSWRDGYTDSRSD
        +E  + IVH +   NNT IT+TD +GNT+   SAG L   K   K + YA+ A AE +  ++   G +++++++KG  Y KK               +  
Subjt:  MEHNADIVHFKLMRNNTFITVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTYFKKKRQAIMSWRDGYTDSRSD

Query:  QNPIVYIEDTTRRAHNGCRLPKQRRV
           I  I++ T  AHNGCR PK+RRV
Subjt:  QNPIVYIEDTTRRAHNGCRLPKQRRV

Q8VZT8 Probable ribosomal protein S11, mitochondrial2.0e-4855.15Show/hide
Query:  MEHNADTERKFDSTSYVRGALEEDGRGFMGSNPFPRPPKMEHNADIVHFKLMRNNTFITVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEAIAEYVGRE
        ++ N+ +  K     +VR  +E++GR   G     + P +E NADI+H K++RNNTF+TVTD+KGN K KA++G L +LKGG K++ Y A+A AE +GR 
Subjt:  MEHNADTERKFDSTSYVRGALEEDGRGFMGSNPFPRPPKMEHNADIVHFKLMRNNTFITVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEAIAEYVGRE

Query:  SRKLGLKSVVMRVKGFTYFKKKRQAIMSWRDGYTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV
        ++ +GLKSVV++V GFT+F KK++AI+++RDG+T+SRSDQNPIVYIEDTTR+AHNGCRLP++RRV
Subjt:  SRKLGLKSVVMRVKGFTYFKKKRQAIMSWRDGYTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV

Arabidopsis top hitse value%identityAlignment
AT1G31817.1 Ribosomal L18p/L5e family protein1.4e-4955.15Show/hide
Query:  MEHNADTERKFDSTSYVRGALEEDGRGFMGSNPFPRPPKMEHNADIVHFKLMRNNTFITVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEAIAEYVGRE
        ++ N+ +  K     +VR  +E++GR   G     + P +E NADI+H K++RNNTF+TVTD+KGN K KA++G L +LKGG K++ Y A+A AE +GR 
Subjt:  MEHNADTERKFDSTSYVRGALEEDGRGFMGSNPFPRPPKMEHNADIVHFKLMRNNTFITVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEAIAEYVGRE

Query:  SRKLGLKSVVMRVKGFTYFKKKRQAIMSWRDGYTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV
        ++ +GLKSVV++V GFT+F KK++AI+++RDG+T+SRSDQNPIVYIEDTTR+AHNGCRLP++RRV
Subjt:  SRKLGLKSVVMRVKGFTYFKKKRQAIMSWRDGYTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTAGACTTCTATTTTCTCTCCTCCGTTCGTCCTCTCTCTCTCATGGCGGCTCTTCCTTTTCTCCTTCTCGCCTCTCCATTTCCCCATTTCTCGGCTCAGATGCTCG
TTCTTCCATGTCCTCTCGCCACTCTTCTTCCCGATCGGATCTCACCGGATCCGTTCAACTAGACAAGCAGGTTCCAGCCTGTGTTGACCTCCCACAAGGTGATTATGTGA
TTGTAGGACGTGGTTGGAAAGCCTTGGGAGCTCAGGGACCTTGCTGCGGTTTGGCTCGTTGGACTGATAATGTCTTTGTTCCTTACGGTACTAGCTCTAGATGTTATCAC
GACGACAGCCGGTCGAATGCTGATACAGAAAGGAAATTTGAATCCACGAGCTTCGGCAGGGGAAATGTAGAGGAAGATGGAAGGGGTTTTATGCGTAATACTTCATTCCC
TAGACCACCCAATGTGGAGCACAATGCTCATACTGAAAGGAAATTTGAATCCGCGAGCTTCGTCGGGGAAAATTTAGAGGAAAATGGAAGGGGTTTTATGGGTAGTACTC
CGTTCCCTAGACCACCCAAGATGGAGCACAATGCTGATACCGAAAGGAAATTTGATTCCACGAGCTATGTCAGGGGAGCTTTAGAGGAAGATGGAAGGGGTTTTATGGGT
AGTAATCCGTTCCCTAGACCACCCAAGATGGAGCACAATGCTGATATTGTCCATTTTAAGCTGATGCGTAATAATACATTCATCACTGTCACTGATAACAAGGGAAATAC
AAAGCTTAAGGCATCTGCTGGTCGGCTTGAAGAATTGAAAGGAGGGCCTAAACTGTCTCGTTATGCTGCTGAAGCAATTGCAGAGTATGTTGGTCGTGAGTCTAGAAAAT
TGGGGTTGAAATCAGTGGTGATGAGGGTTAAAGGCTTTACTTATTTTAAGAAGAAAAGACAAGCGATTATGAGTTGGAGAGACGGATATACGGATTCTAGAAGTGATCAA
AATCCAATTGTTTACATTGAAGATACTACTAGACGTGCCCACAATGGTTGCCGACTACCAAAGCAACGCCGTGTCTAG
mRNA sequenceShow/hide mRNA sequence
AAATAATATTTATTGAAAAAACCCTAAAAAAGGACAATAACTGGCCGGCAACGACACTAAGGTTGGTATCTTGGCAATTCCCATTCCCGGAACCACCGCCCGCCGCCGTT
CGACGACGACGATGAGTAGACTTCTATTTTCTCTCCTCCGTTCGTCCTCTCTCTCTCATGGCGGCTCTTCCTTTTCTCCTTCTCGCCTCTCCATTTCCCCATTTCTCGGC
TCAGATGCTCGTTCTTCCATGTCCTCTCGCCACTCTTCTTCCCGATCGGATCTCACCGGATCCGTTCAACTAGACAAGCAGGTTCCAGCCTGTGTTGACCTCCCACAAGG
TGATTATGTGATTGTAGGACGTGGTTGGAAAGCCTTGGGAGCTCAGGGACCTTGCTGCGGTTTGGCTCGTTGGACTGATAATGTCTTTGTTCCTTACGGTACTAGCTCTA
GATGTTATCACGACGACAGCCGGTCGAATGCTGATACAGAAAGGAAATTTGAATCCACGAGCTTCGGCAGGGGAAATGTAGAGGAAGATGGAAGGGGTTTTATGCGTAAT
ACTTCATTCCCTAGACCACCCAATGTGGAGCACAATGCTCATACTGAAAGGAAATTTGAATCCGCGAGCTTCGTCGGGGAAAATTTAGAGGAAAATGGAAGGGGTTTTAT
GGGTAGTACTCCGTTCCCTAGACCACCCAAGATGGAGCACAATGCTGATACCGAAAGGAAATTTGATTCCACGAGCTATGTCAGGGGAGCTTTAGAGGAAGATGGAAGGG
GTTTTATGGGTAGTAATCCGTTCCCTAGACCACCCAAGATGGAGCACAATGCTGATATTGTCCATTTTAAGCTGATGCGTAATAATACATTCATCACTGTCACTGATAAC
AAGGGAAATACAAAGCTTAAGGCATCTGCTGGTCGGCTTGAAGAATTGAAAGGAGGGCCTAAACTGTCTCGTTATGCTGCTGAAGCAATTGCAGAGTATGTTGGTCGTGA
GTCTAGAAAATTGGGGTTGAAATCAGTGGTGATGAGGGTTAAAGGCTTTACTTATTTTAAGAAGAAAAGACAAGCGATTATGAGTTGGAGAGACGGATATACGGATTCTA
GAAGTGATCAAAATCCAATTGTTTACATTGAAGATACTACTAGACGTGCCCACAATGGTTGCCGACTACCAAAGCAACGCCGTGTCTAGATGCTTGGGTTGGGATCTTGC
TAATGCAACAACAAAGTGATGATGAGGTCTTTCTATCTTTGTTGGAACAATTTATTTTTTCAAATTTGATGTAGGTTGTCTTCAAGTTTTTACTTGCTTATTGCAATAAT
GATGACAATTGGATGTTCTTTTTTTTTATATACATCAGTGTAAAATTTTCCTGGTTTAAATTGATGTAGCTTGCTTTCACGTTTTTATTTCCTGAGAGTAATGATGACAG
TATGATCTTTTTATATAGACCAGTATTAAACAA
Protein sequenceShow/hide protein sequence
MSRLLFSLLRSSSLSHGGSSFSPSRLSISPFLGSDARSSMSSRHSSSRSDLTGSVQLDKQVPACVDLPQGDYVIVGRGWKALGAQGPCCGLARWTDNVFVPYGTSSRCYH
DDSRSNADTERKFESTSFGRGNVEEDGRGFMRNTSFPRPPNVEHNAHTERKFESASFVGENLEENGRGFMGSTPFPRPPKMEHNADTERKFDSTSYVRGALEEDGRGFMG
SNPFPRPPKMEHNADIVHFKLMRNNTFITVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTYFKKKRQAIMSWRDGYTDSRSDQ
NPIVYIEDTTRRAHNGCRLPKQRRV