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Sed0012206 (gene) of Chayote v1 genome

Gene IDSed0012206
OrganismSechium edule (Chayote v1)
DescriptionSerine-rich protein-like protein
Genome locationLG05:27551876..27552274
RNA-Seq ExpressionSed0012206
SyntenySed0012206
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG60842.1 hypothetical protein EZV62_012205 [Acer yangbiense]1.1e-1551.43Show/hide
Query:  NHANAAPSNKKKAVCVCSPTTHPGSFRCSLHRKSKSSAN--SSNESIRSSSSTLKNSLARI----HDLTRRALWAMIRHPLDQERRRSPVERRPSRLSVM
        NH     + K+K  C+CSPTTHPGSFRCSLH+ + SS++  S N  + +  S +KNSL RI     DL +RAL A+IR    Q++RR+  ++RPSRLS+M
Subjt:  NHANAAPSNKKKAVCVCSPTTHPGSFRCSLHRKSKSSAN--SSNESIRSSSSTLKNSLARI----HDLTRRALWAMIRHPLDQERRRSPVERRPSRLSVM

Query:  SKAED
        SKAED
Subjt:  SKAED

XP_004152334.1 uncharacterized protein LOC101207294 [Cucumis sativus]6.6e-1852.5Show/hide
Query:  SFQKSCVNHANAAPSNKKKAVCVCSPTTHPGSFRCSLHRKSKSSANSS------NESIRSSSSTLKNSLARIH-----DLTRRALWAMIRHPLDQERRRS
        S QK+  ++ANA PSNKKK +C+CSPT HPGSFRCSLH+ S  S + S      N S+    S + NSL RI      DL +RAL A+IR    Q+RR+S
Subjt:  SFQKSCVNHANAAPSNKKKAVCVCSPTTHPGSFRCSLHRKSKSSANSS------NESIRSSSSTLKNSLARIH-----DLTRRALWAMIRHPLDQERRRS

Query:  PVERRPSRLSVMSKAEDHQD
          +RRPS LSVMSKAE+ +D
Subjt:  PVERRPSRLSVMSKAEDHQD

XP_008454197.1 PREDICTED: uncharacterized protein LOC103494676 [Cucumis melo]9.5e-1750Show/hide
Query:  ASTLGLKSRQCSSPSSAAEPWPSFQKSCVNHANAAPSNKKKAVCVCSPTTHPGSFRCSLHRKSKSSANSSNES-IRSSS-----STLKNSLARI-----H
        AST+     Q    S++     S QK+  ++ANA PSNK+K VCVCSPT HPGSFRCSLH+ S  S + SN S +R+ S     S + NSL RI      
Subjt:  ASTLGLKSRQCSSPSSAAEPWPSFQKSCVNHANAAPSNKKKAVCVCSPTTHPGSFRCSLHRKSKSSANSSNES-IRSSS-----STLKNSLARI-----H

Query:  DLTRRALWAMIRHPLDQERRRSPVERRPSRLSVMSKAEDHQD
        DL +RAL A+IR    Q+RR S  +RRPSRLS+MSKAE+ +D
Subjt:  DLTRRALWAMIRHPLDQERRRSPVERRPSRLSVMSKAEDHQD

XP_031379393.1 uncharacterized protein LOC116194663 [Punica granatum]1.3e-1350.44Show/hide
Query:  KSCVNHANAAPSNKKKAVCVCSPTTHPGSFRCSLHR------KSKSSANSSNESIRSSSSTLKNSLARI----HDLTRRALWAMIRHPLDQERRRSPVER
        K C +     P + +K  C+CSPTTHPGSFRCSLH+       S S+A SS+ S+    S + NSL RI     DL +RAL A+IR    Q RRR     
Subjt:  KSCVNHANAAPSNKKKAVCVCSPTTHPGSFRCSLHR------KSKSSANSSNESIRSSSSTLKNSLARI----HDLTRRALWAMIRHPLDQERRRSPVER

Query:  RPSRLSVMSKAED
        RPSRLSVMSKAED
Subjt:  RPSRLSVMSKAED

XP_038877738.1 uncharacterized protein LOC120069962 [Benincasa hispida]3.1e-1548.85Show/hide
Query:  RQCSSPSSAAEPWPSFQKSCVNHANAAPSNKKKAVCVCSPTTHPGSFRCSLHRKSKSSANSS------NESIRSSSSTLKNSLARI-----HDLTRRALW
        ++ +SPS +     S QK+   +ANA PSNKKK  C+CSPT HPGSFRCSLH+ S+ S N +      N S+    S + NSL RI      DL +R L 
Subjt:  RQCSSPSSAAEPWPSFQKSCVNHANAAPSNKKKAVCVCSPTTHPGSFRCSLHRKSKSSANSS------NESIRSSSSTLKNSLARI-----HDLTRRALW

Query:  AMIRHPLDQERRRSPVERRPSRLSVMSKAED
        A+IR    Q+RRRS  + RPSRLSVMS+AE+
Subjt:  AMIRHPLDQERRRSPVERRPSRLSVMSKAED

TrEMBL top hitse value%identityAlignment
A0A0A0KWX3 Uncharacterized protein3.2e-1852.5Show/hide
Query:  SFQKSCVNHANAAPSNKKKAVCVCSPTTHPGSFRCSLHRKSKSSANSS------NESIRSSSSTLKNSLARIH-----DLTRRALWAMIRHPLDQERRRS
        S QK+  ++ANA PSNKKK +C+CSPT HPGSFRCSLH+ S  S + S      N S+    S + NSL RI      DL +RAL A+IR    Q+RR+S
Subjt:  SFQKSCVNHANAAPSNKKKAVCVCSPTTHPGSFRCSLHRKSKSSANSS------NESIRSSSSTLKNSLARIH-----DLTRRALWAMIRHPLDQERRRS

Query:  PVERRPSRLSVMSKAEDHQD
          +RRPS LSVMSKAE+ +D
Subjt:  PVERRPSRLSVMSKAEDHQD

A0A1S3BY19 uncharacterized protein LOC1034946764.6e-1750Show/hide
Query:  ASTLGLKSRQCSSPSSAAEPWPSFQKSCVNHANAAPSNKKKAVCVCSPTTHPGSFRCSLHRKSKSSANSSNES-IRSSS-----STLKNSLARI-----H
        AST+     Q    S++     S QK+  ++ANA PSNK+K VCVCSPT HPGSFRCSLH+ S  S + SN S +R+ S     S + NSL RI      
Subjt:  ASTLGLKSRQCSSPSSAAEPWPSFQKSCVNHANAAPSNKKKAVCVCSPTTHPGSFRCSLHRKSKSSANSSNES-IRSSS-----STLKNSLARI-----H

Query:  DLTRRALWAMIRHPLDQERRRSPVERRPSRLSVMSKAEDHQD
        DL +RAL A+IR    Q+RR S  +RRPSRLS+MSKAE+ +D
Subjt:  DLTRRALWAMIRHPLDQERRRSPVERRPSRLSVMSKAEDHQD

A0A218XA80 uncharacterized protein LOC1161946636.2e-1450.44Show/hide
Query:  KSCVNHANAAPSNKKKAVCVCSPTTHPGSFRCSLHR------KSKSSANSSNESIRSSSSTLKNSLARI----HDLTRRALWAMIRHPLDQERRRSPVER
        K C +     P + +K  C+CSPTTHPGSFRCSLH+       S S+A SS+ S+    S + NSL RI     DL +RAL A+IR    Q RRR     
Subjt:  KSCVNHANAAPSNKKKAVCVCSPTTHPGSFRCSLHR------KSKSSANSSNESIRSSSSTLKNSLARI----HDLTRRALWAMIRHPLDQERRRSPVER

Query:  RPSRLSVMSKAED
        RPSRLSVMSKAED
Subjt:  RPSRLSVMSKAED

A0A5C7HXF5 Uncharacterized protein5.1e-1651.43Show/hide
Query:  NHANAAPSNKKKAVCVCSPTTHPGSFRCSLHRKSKSSAN--SSNESIRSSSSTLKNSLARI----HDLTRRALWAMIRHPLDQERRRSPVERRPSRLSVM
        NH     + K+K  C+CSPTTHPGSFRCSLH+ + SS++  S N  + +  S +KNSL RI     DL +RAL A+IR    Q++RR+  ++RPSRLS+M
Subjt:  NHANAAPSNKKKAVCVCSPTTHPGSFRCSLHRKSKSSAN--SSNESIRSSSSTLKNSLARI----HDLTRRALWAMIRHPLDQERRRSPVERRPSRLSVM

Query:  SKAED
        SKAED
Subjt:  SKAED

A0A5D3E1W2 Serine-rich protein-like protein4.6e-1750Show/hide
Query:  ASTLGLKSRQCSSPSSAAEPWPSFQKSCVNHANAAPSNKKKAVCVCSPTTHPGSFRCSLHRKSKSSANSSNES-IRSSS-----STLKNSLARI-----H
        AST+     Q    S++     S QK+  ++ANA PSNK+K VCVCSPT HPGSFRCSLH+ S  S + SN S +R+ S     S + NSL RI      
Subjt:  ASTLGLKSRQCSSPSSAAEPWPSFQKSCVNHANAAPSNKKKAVCVCSPTTHPGSFRCSLHRKSKSSANSSNES-IRSSS-----STLKNSLARI-----H

Query:  DLTRRALWAMIRHPLDQERRRSPVERRPSRLSVMSKAEDHQD
        DL +RAL A+IR    Q+RR S  +RRPSRLS+MSKAE+ +D
Subjt:  DLTRRALWAMIRHPLDQERRRSPVERRPSRLSVMSKAEDHQD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G24577.1 unknown protein6.8e-0557.58Show/hide
Query:  KAVCVCSPTTHPGSFRCSLHRKSKSSANSSNES
        K +C+CSPTTHPGSF+C LHR      N S E+
Subjt:  KAVCVCSPTTHPGSFRCSLHRKSKSSANSSNES

AT5G11090.1 serine-rich protein-related2.9e-1140Show/hide
Query:  KSCVNHANAAPSNKKKAV--CVCSPTTHPGSFRCSLHRK-----SKSSANSSNESIRSSSSTLKNSLARI----HDLTRRALWAMIRHPLDQERRRSPVE
        KS     N  PS+  K    C+CSPTTHPGSFRCSLH+       + +A+ +   +    S + NSL RI     +  RRAL  +IR      +RR+  +
Subjt:  KSCVNHANAAPSNKKKAV--CVCSPTTHPGSFRCSLHRK-----SKSSANSSNESIRSSSSTLKNSLARI----HDLTRRALWAMIRHPLDQERRRSPVE

Query:  RRPSRLSVMSKAEDH
         RPSRLS+M+KA+++
Subjt:  RRPSRLSVMSKAEDH

AT5G20370.1 serine-rich protein-related8.9e-0536.03Show/hide
Query:  SSAAEPWPSFQKSCVNHANAAPSNKKKAVCVCSPTTHPGSFRCSLHR-----KSKSSANSS-------------NESIRSSSSTLKNSLARIHDLT----
        S  + P PS      NH       + K  C+CSPTTHPGSFRCS HR     KSK+ A+S+             N  +      L NSLA+I  +     
Subjt:  SSAAEPWPSFQKSCVNHANAAPSNKKKAVCVCSPTTHPGSFRCSLHR-----KSKSSANSS-------------NESIRSSSSTLKNSLARIHDLT----

Query:  RRALWAMIRHPLDQERRRSPVERRPSRLSVMSKAED
        RR+L A +  P      R P E RP RLS   + +D
Subjt:  RRALWAMIRHPLDQERRRSPVERRPSRLSVMSKAED

AT5G25280.1 serine-rich protein-related1.7e-1143.52Show/hide
Query:  NHANAAPSNKKKAVCVCSPTTHPGSFRCSLHRK-----SKSSANSSNESIRSSSSTLKNSLARI----HDLTRRALWAMIRHPLDQERRRSPVERRPSRL
        NH     S ++   C+CSPTTHPGSFRCSLH+       + +A+ +   +    S + NSL RI     +  RRAL  +IR    Q +RRS  E R SRL
Subjt:  NHANAAPSNKKKAVCVCSPTTHPGSFRCSLHRK-----SKSSANSSNESIRSSSSTLKNSLARI----HDLTRRALWAMIRHPLDQERRRSPVERRPSRL

Query:  SVMSKAED
        + MSKAED
Subjt:  SVMSKAED

AT5G25280.2 serine-rich protein-related1.7e-1143.52Show/hide
Query:  NHANAAPSNKKKAVCVCSPTTHPGSFRCSLHRK-----SKSSANSSNESIRSSSSTLKNSLARI----HDLTRRALWAMIRHPLDQERRRSPVERRPSRL
        NH     S ++   C+CSPTTHPGSFRCSLH+       + +A+ +   +    S + NSL RI     +  RRAL  +IR    Q +RRS  E R SRL
Subjt:  NHANAAPSNKKKAVCVCSPTTHPGSFRCSLHRK-----SKSSANSSNESIRSSSSTLKNSLARI----HDLTRRALWAMIRHPLDQERRRSPVERRPSRL

Query:  SVMSKAED
        + MSKAED
Subjt:  SVMSKAED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCACACTCGGACTCAAATCTCGACAATGTTCGTCTCCTTCATCGGCGGCGGAACCTTGGCCTTCGTTTCAGAAGAGTTGTGTCAACCATGCAAATGCGGCACC
GTCGAACAAGAAGAAAGCCGTGTGTGTGTGTTCGCCGACGACGCATCCAGGTTCGTTTCGGTGTTCTCTCCACAGGAAATCGAAGAGCTCTGCGAATAGCTCGAACGAAT
CGATTCGGTCGAGCAGCAGCACGTTGAAGAACTCGCTTGCCAGAATCCACGATCTCACGAGAAGAGCTTTGTGGGCTATGATTAGGCATCCTTTGGATCAAGAGCGGCGG
CGATCACCGGTTGAGCGTAGACCTAGCCGGCTATCAGTTATGTCTAAAGCAGAGGATCATCAGGACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCACACTCGGACTCAAATCTCGACAATGTTCGTCTCCTTCATCGGCGGCGGAACCTTGGCCTTCGTTTCAGAAGAGTTGTGTCAACCATGCAAATGCGGCACC
GTCGAACAAGAAGAAAGCCGTGTGTGTGTGTTCGCCGACGACGCATCCAGGTTCGTTTCGGTGTTCTCTCCACAGGAAATCGAAGAGCTCTGCGAATAGCTCGAACGAAT
CGATTCGGTCGAGCAGCAGCACGTTGAAGAACTCGCTTGCCAGAATCCACGATCTCACGAGAAGAGCTTTGTGGGCTATGATTAGGCATCCTTTGGATCAAGAGCGGCGG
CGATCACCGGTTGAGCGTAGACCTAGCCGGCTATCAGTTATGTCTAAAGCAGAGGATCATCAGGACTAG
Protein sequenceShow/hide protein sequence
MASTLGLKSRQCSSPSSAAEPWPSFQKSCVNHANAAPSNKKKAVCVCSPTTHPGSFRCSLHRKSKSSANSSNESIRSSSSTLKNSLARIHDLTRRALWAMIRHPLDQERR
RSPVERRPSRLSVMSKAEDHQD