; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0012248 (gene) of Chayote v1 genome

Gene IDSed0012248
OrganismSechium edule (Chayote v1)
DescriptionTransmembrane protein
Genome locationLG04:295544..298089
RNA-Seq ExpressionSed0012248
SyntenySed0012248
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR031851 - Protein of unknown function DUF4750


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064812.1 uncharacterized protein E6C27_scaffold82G001200 [Cucumis melo var. makuwa]2.8e-3183.33Show/hide
Query:  SSSSSFSSLEYSLSLWDYVNLLILRPILAVVFTISLISFGWFLAWKLVLVHVPLVQEIFGLRKKPARPKPPSRRLSRFYNSLNSQTSASG
        SSSSSF S EYSLS WDY++L ILRPILA++FT SLIS GWFLAWKLVLVHVPLVQEIFGLRKKPA+ KPP+RRLS+FY+SLNSQTSASG
Subjt:  SSSSSFSSLEYSLSLWDYVNLLILRPILAVVFTISLISFGWFLAWKLVLVHVPLVQEIFGLRKKPARPKPPSRRLSRFYNSLNSQTSASG
KGN47747.1 hypothetical protein Csa_004367 [Cucumis sativus]1.9e-3285.56Show/hide
Query:  SSSSSFSSLEYSLSLWDYVNLLILRPILAVVFTISLISFGWFLAWKLVLVHVPLVQEIFGLRKKPARPKPPSRRLSRFYNSLNSQTSASG
        SSSSSFSS EYSLS WDY+NL ILRPILA++FT SLIS GWFLAWKLVLVHVPLVQEIFGLRKKPA+ KPP+RRLS+FY+SLNSQTSASG
Subjt:  SSSSSFSSLEYSLSLWDYVNLLILRPILAVVFTISLISFGWFLAWKLVLVHVPLVQEIFGLRKKPARPKPPSRRLSRFYNSLNSQTSASG
XP_008445365.1 PREDICTED: uncharacterized protein LOC103488423 isoform X1 [Cucumis melo]2.8e-3183.33Show/hide
Query:  SSSSSFSSLEYSLSLWDYVNLLILRPILAVVFTISLISFGWFLAWKLVLVHVPLVQEIFGLRKKPARPKPPSRRLSRFYNSLNSQTSASG
        SSSSSF S EYSLS WDY++L ILRPILA++FT SLIS GWFLAWKLVLVHVPLVQEIFGLRKKPA+ KPP+RRLS+FY+SLNSQTSASG
Subjt:  SSSSSFSSLEYSLSLWDYVNLLILRPILAVVFTISLISFGWFLAWKLVLVHVPLVQEIFGLRKKPARPKPPSRRLSRFYNSLNSQTSASG
XP_023545613.1 uncharacterized protein LOC111804995 isoform X1 [Cucurbita pepo subsp. pepo]2.8e-3184.44Show/hide
Query:  SSSSSFSSLEYSLSLWDYVNLLILRPILAVVFTISLISFGWFLAWKLVLVHVPLVQEIFGLRKKPARPKPPSRRLSRFYNSLNSQTSASG
        SSSSSFSS E SLS WDY+NL ILRPILAVVFT SLIS GWFLAWKLVLVHVPLVQEIFGLRKK  +PKPP+RRLS+FYN+L+SQTSASG
Subjt:  SSSSSFSSLEYSLSLWDYVNLLILRPILAVVFTISLISFGWFLAWKLVLVHVPLVQEIFGLRKKPARPKPPSRRLSRFYNSLNSQTSASG
XP_031742531.1 uncharacterized protein LOC101215134 [Cucumis sativus]1.9e-3285.56Show/hide
Query:  SSSSSFSSLEYSLSLWDYVNLLILRPILAVVFTISLISFGWFLAWKLVLVHVPLVQEIFGLRKKPARPKPPSRRLSRFYNSLNSQTSASG
        SSSSSFSS EYSLS WDY+NL ILRPILA++FT SLIS GWFLAWKLVLVHVPLVQEIFGLRKKPA+ KPP+RRLS+FY+SLNSQTSASG
Subjt:  SSSSSFSSLEYSLSLWDYVNLLILRPILAVVFTISLISFGWFLAWKLVLVHVPLVQEIFGLRKKPARPKPPSRRLSRFYNSLNSQTSASG
TrEMBL top hitse value%identityAlignment
A0A0A0KH75 Uncharacterized protein9.4e-3385.56Show/hide
Query:  SSSSSFSSLEYSLSLWDYVNLLILRPILAVVFTISLISFGWFLAWKLVLVHVPLVQEIFGLRKKPARPKPPSRRLSRFYNSLNSQTSASG
        SSSSSFSS EYSLS WDY+NL ILRPILA++FT SLIS GWFLAWKLVLVHVPLVQEIFGLRKKPA+ KPP+RRLS+FY+SLNSQTSASG
Subjt:  SSSSSFSSLEYSLSLWDYVNLLILRPILAVVFTISLISFGWFLAWKLVLVHVPLVQEIFGLRKKPARPKPPSRRLSRFYNSLNSQTSASG
A0A1S3BC25 uncharacterized protein LOC103488423 isoform X31.4e-3183.33Show/hide
Query:  SSSSSFSSLEYSLSLWDYVNLLILRPILAVVFTISLISFGWFLAWKLVLVHVPLVQEIFGLRKKPARPKPPSRRLSRFYNSLNSQTSASG
        SSSSSF S EYSLS WDY++L ILRPILA++FT SLIS GWFLAWKLVLVHVPLVQEIFGLRKKPA+ KPP+RRLS+FY+SLNSQTSASG
Subjt:  SSSSSFSSLEYSLSLWDYVNLLILRPILAVVFTISLISFGWFLAWKLVLVHVPLVQEIFGLRKKPARPKPPSRRLSRFYNSLNSQTSASG
A0A1S3BCI8 uncharacterized protein LOC103488423 isoform X11.4e-3183.33Show/hide
Query:  SSSSSFSSLEYSLSLWDYVNLLILRPILAVVFTISLISFGWFLAWKLVLVHVPLVQEIFGLRKKPARPKPPSRRLSRFYNSLNSQTSASG
        SSSSSF S EYSLS WDY++L ILRPILA++FT SLIS GWFLAWKLVLVHVPLVQEIFGLRKKPA+ KPP+RRLS+FY+SLNSQTSASG
Subjt:  SSSSSFSSLEYSLSLWDYVNLLILRPILAVVFTISLISFGWFLAWKLVLVHVPLVQEIFGLRKKPARPKPPSRRLSRFYNSLNSQTSASG
A0A1S3BDD8 uncharacterized protein LOC103488423 isoform X21.4e-3183.33Show/hide
Query:  SSSSSFSSLEYSLSLWDYVNLLILRPILAVVFTISLISFGWFLAWKLVLVHVPLVQEIFGLRKKPARPKPPSRRLSRFYNSLNSQTSASG
        SSSSSF S EYSLS WDY++L ILRPILA++FT SLIS GWFLAWKLVLVHVPLVQEIFGLRKKPA+ KPP+RRLS+FY+SLNSQTSASG
Subjt:  SSSSSFSSLEYSLSLWDYVNLLILRPILAVVFTISLISFGWFLAWKLVLVHVPLVQEIFGLRKKPARPKPPSRRLSRFYNSLNSQTSASG
A0A5A7V8X8 Uncharacterized protein1.4e-3183.33Show/hide
Query:  SSSSSFSSLEYSLSLWDYVNLLILRPILAVVFTISLISFGWFLAWKLVLVHVPLVQEIFGLRKKPARPKPPSRRLSRFYNSLNSQTSASG
        SSSSSF S EYSLS WDY++L ILRPILA++FT SLIS GWFLAWKLVLVHVPLVQEIFGLRKKPA+ KPP+RRLS+FY+SLNSQTSASG
Subjt:  SSSSSFSSLEYSLSLWDYVNLLILRPILAVVFTISLISFGWFLAWKLVLVHVPLVQEIFGLRKKPARPKPPSRRLSRFYNSLNSQTSASG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G36380.1 unknown protein7.9e-1664.06Show/hide
Query:  ILRPILAVVFTISLISFGWFLAWKLVLVHVPLVQEIFGLRKKPARPKPPSR-RLSRFYNSLNSQ
        ++RP+LA+ F I  I+  WFLAWKLVL HVPLVQEIFGLRKK   PKP SR R+++FY S++SQ
Subjt:  ILRPILAVVFTISLISFGWFLAWKLVLVHVPLVQEIFGLRKKPARPKPPSR-RLSRFYNSLNSQ

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTCGTCGTCTTCTTCTTCATTCTCATCTTTGGAGTATTCTCTTTCTCTCTGGGATTATGTTAATCTATTAATTCTACGCCCGATTCTTGCCGTAGTGTTCACGAT
CTCATTGATTTCTTTCGGTTGGTTTTTGGCGTGGAAGCTCGTTCTTGTTCACGTCCCTTTGGTGCAAGAAATTTTTGGTTTGCGTAAGAAACCCGCTAGACCTAAGCCTC
CCTCGCGACGATTGTCGAGATTTTATAATAGTCTGAATTCTCAAACTTCAGCTTCTGGCTGA
mRNA sequenceShow/hide mRNA sequence
GTGCAGCTGAGTTCTTCTGCAACAGAGCTCTTCTAATGGAGTCGTCGTCTTCTTCTTCATTCTCATCTTTGGAGTATTCTCTTTCTCTCTGGGATTATGTTAATCTATTA
ATTCTACGCCCGATTCTTGCCGTAGTGTTCACGATCTCATTGATTTCTTTCGGTTGGTTTTTGGCGTGGAAGCTCGTTCTTGTTCACGTCCCTTTGGTGCAAGAAATTTT
TGGTTTGCGTAAGAAACCCGCTAGACCTAAGCCTCCCTCGCGACGATTGTCGAGATTTTATAATAGTCTGAATTCTCAAACTTCAGCTTCTGGCTGATGTATGTTTTTGA
GCTTGGAAGCCACAATGAAATACAAAGCAGTACTGGCCAATTGTTTGTGAAGACAAATTGCAAAGGAGCTAGGCACCCTTCAAGCTGATGTATATAGCTCATAGTGAAAG
TTTATGCATGCTAAGGTTTTAACAATTGAATTATTTGATAGTTGGATCAAATGGAAGTGGAACAATATCAAGATTTTGACCACCAATTATTTTATTTTTAAGGAAACTAC
CACCAAGTCTTGATGATTGTAGAATGAAGATGAACAATAATTATGATTGCTATGGCCTTCGTTATCATGTTTATACATAACATGCATGATCTTGCATTTCAAAACTTGTA
GTACTATTATAGTACCTATTTTTTTTAGATTATAATAATTGAAGGTGGGCCTTGAATCCAAAACTTTTT
Protein sequenceShow/hide protein sequence
MESSSSSSFSSLEYSLSLWDYVNLLILRPILAVVFTISLISFGWFLAWKLVLVHVPLVQEIFGLRKKPARPKPPSRRLSRFYNSLNSQTSASG